>input_sequence_36224
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--------------------ATGATGTCGATGTCGACGAT------------GGTGGAGCTGGCATGGCGCTTCGCGGCC
GCACACGTCCTGCTGCTGCCCGCGGC---CGTTGGCGGCGTCGCCTACCTCCTCCTCCGCGCCCTACGTGCCTCCCAACT
CCGGCAGGAAGGCAACAGCCCGCCGCCGGGGGGCATCGGCGGCTGGTGCCGGGGCGCGGTCGGGGCGGAGACGCTGTCCT
TCCTGGCGGACAACAGCAGCGGCAGGGGCTTCTACCACTTCGTCCACGCGCGCGCGCTCCGGCACGGCGCCTGCTTCCGC
ACCGTGCTCTTCGGCCGCACCCACGTCTTCCTCCTCTCGTCCCGCGCGCGCGCCGCCGCCGCCAGCCTCCTGGCCGCCGA
CCCGCCCCACCTCGCCAAGCGCTACGTGCGCACCGTCGCCGACCTGCTCGGCGAGCACAGCCTCCTCTGCACCTCCCACG
GCGCGCACCGCCGCATGCGCCGCGCCGTCGCGGGCCTCTTCGCCGCCGCGCCCACGGCCGCCTTCGCCGCCGCCTTCGAC
CGCCTGATCACCGCCCGGCTGCTGGCCGACGGCTGCACGGGCCGGGCCGTCGTGCTGGACGCCGCGCTCGACGTCACCTT
CAGGGCCATCTGCGAGATGCTCATCGGACCACAGGAGGATGCACATAAGCTGGGACAGCTGCAGAGCGACGTCATGGACG
TAACGCAAGCCATGCTCGCGCTGCCAATCAGGCTGCCTGGAACAAGGTTCTACAGAGGCCTACAGGTACCTTTTTTTTTT
CTTCTAATGTTTTTACAGTTTTGCTTATTTCTTTTTACTTTTT-CGCCACTCGAAACCATCACTGTCCGATCTAGATTGA
CTAGATCACTAGATACCAAGATTCGCGCAAGTATGCATGTTTTTAGTTACTACAAATTCACAAGAAGGGAATGATTCCTA
GCTAGATTCTTGGTGTGGAATTGC-T-TTGATGTCAGGCAAGGAAGAGGATCATGGATGCACTGAGGCAAGAAATATGCA
TGAGGCGAGAAAATGGCCTGAAACTAGATCGCCGCGACGACTTTCTGCAGACCCTTCTTCTCAAGAGCCATATGGATTCA
CCTGAAGAAGCGCTCACGGATGAACAGATTCTGGACAACATTTTGACACTCATAATTGCAGGTATAGATATATGTCAGTC
ATAATTCAGTTGTTAACTTGCAAAGACTTAGTTGAAATTTCAATCCAGGTGCATGGGGTAAGTCTTGTTTGTAACTGAGT
GCAGGGCAAGTGACAACAGCAACGGCAATTACATGGATGGTCAAGTACCTGGGCGACAACACAGACCTCCAAGAGAAATT
AAGAGTGAGTGAGGACTGAGGAGTCATTCCATCTCATCTGATCTAACCATCTTACCCATACATAGCCCATGTATGAAGAA
CAAGTTACTTCATTTCTTGATTGCAATTCTCTATCTACATG--TATGCAGTCAATTCAGCTGGATCTGGCATCCAAGCAC
CATGACGCACCTCTTACCCTACAACATCTGAACACCATGGACTACGCATACAAGACAGTCAAAGAATCCTTGAGGATGGC
CACCATAGTTTCTTGGTTTCCAAGGGTGGCACTCAAGGACTGCCAGGTTGCAGGTAACTAAACCTCGCTGATTTTA-TGC
TTTCTCCTTGCTGGAAGCTACAGTTCTATTAACAGAGACAAGTAACAATAGGATTCCACATTAAGAAGGACTGGATCATA
AATGTCGACGCGAGATCCATACACTATGATCCGGCCATCTATGACAATCCAACGCTGTTTGATCCTTCCAGGTTCAATGT
ATGTATTGTTGTAAGCCTGAAGAAATTATAG-------------------------------------------------
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----------TAGATATATATTGTGTTGTGATGTCGACAGATTGATGTTGTTGCTATGGACAGGACGATATGAAGCCATA
CAGCTTCTTGGTCTTTGGAGCAGGCAGCAGAACATGCCTGGGGATGAATCTTGCCAAGATTATGATGCTAATATTCCTTC
ATCGCCTCATCACAAATTTCAGGTCTCAGCTCTAAAGTCAAGTTTCTTTATTTTGATGCAAGGCGCAAACAAGTA-GAGC
TGGAGAGTAAAACTAAAATG-TCTGATGTTTTCAGATGGGAGATGGCAGACCACGATACAAGCCTCGAGAAATGGGCAAT
GTTTCCAAGGCTGAAGAATGGCTGCCCAATTCGGCTCACGCCGATACGCAAGGACAAGATGCACTGA-------------
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>chr1D_1_TraesCS1D01G200600
TATAATTTTGTTTTGAATTCGTTTTTATCTGGCTCGAAATTCTGGGGTTTAAAGTATATCCACCAAAAT----ATAATCA
AAAAATCTATTGAAATTACTATGCATGATAGCTCATTAATCAGATGAACCTTGAATCTGATCATCATCAATCAAATATAC
TCCCTCTGTTCCTAAATATAAGACCTTTTAGAGATTTCAGTGTCTTATATTCAGGAACGGAGGGAGTAGAAAAGCGAGCA
GTAGTCT-------------------------------------------------------------------------
----------------------------------CCTCCGTGTCTACTTTTCTTCGTC-----CAGTACACTAGTAGCTA
CTCTCTCTCTCTATATATATCTCTCTCTCTTTGCGGGAAAGGAACTTTCATTAATCAAACCAAGTGGTTACTTTCACGAG
TAGCTACTCTAGCA---AAGGTAGGTTAATCACACGAATGCGATGATGAACACGAATGATATGATGATGCATGATCGAAG
GCCATATGGGGCCCATAGATATGCGGGCGACAAGTCATCACTGGTTAAGTGAGTGGGAAATTGGCTGGGTTCCTCTTCCT
CGAGATACTCCTCGACAAGACCAGAATATGCGGCCGTTCAGTCAATGGGAAAACAC-----TCAACTAATAAAGCAGACT
GAATTTTGGTTCGTGCGGGTTGGTCATATCTGCGTGCCTGCCCTGGAG--CTGGAAGCTAAGATCATGACGACACACAGC
ACTCGCCATGCA----------AATGGAATGAAATCCGGCATCTCGTCAACGTACCTGCTTGCATGAACAGCGAGACGAT
GATGCTCATCTTGAAACGCAAGCGAGG-GAGGCAGAGGACGGCGGGAAAAGAAAGATGCAATGCAACTAGCGCAAGTGCG
GTTGGAATCCATCAGATCAGGTATCCTTCCAGGATCCATCGCCATGATTGATCTGGGGAATGGTTGCACCCGACCGACTC
GCTCATATATCGCGCGCGTGCATGCTTGCTTAGATATGCGTGCGTGCCAGTGCCAGCGCCAGTGAAACCACATTA---GT
CACTAGCTCGCCGGCCGGAGATGATGTCGATGTCGACGAT------------GGTGGAGCTGGCATGGCGCTTCGCGGCC
GCACACGTCCTGCTGCTGCCCGCGGC---CGTTGGCGGCGTCGCCTACCTCCTCCTCCGCGCCCTACGTGCCTCCCAACT
CCGGCAGGAAGGCAACAGCCCGCCGCCGGGGGGCATCGGCGGCTGGTGCCGGGGCGCGGTCGGGGCGGAGACGCTGTCCT
TCCTGGCGGACAACAGCAGCGGCAGGGGCTTCTACCACTTCGTCCACGCGCGCGCGCTCCGGCACGGCGCCTGCTTCCGC
ACCGTGCTCTTCGGCCGCACCCACGTCTTCCTCCTCTCGTCCCGCGCGCGCGCCGCCGCCGCCAGCCTCCTGGCCGCCGA
CCCGCCCCACCTCGCCAAGCGCTACGTGCGCACCGTCGCCGACCTGCTCGGCGAGCACAGCCTCCTCTGCACCTCCCACG
GCGCGCACCGCCGCATGCGCCGCGCCGTCGCGGGCCTCTTCGCCGCCGCGCCCACGGCCGCCTTCGCCGCCGCCTTCGAC
CGCCTGATCACCGCCCGGCTGCTGGCCGACGGCTGCACGGGCCGGGCCGTCGTGCTGGACGCCGCGCTCGACGTCACCTT
CAGGGCCATCTGCGAGATGCTCATCGGACCACAGGAGGATGCACATAAGCTGGGACAGCTGCAGAGCGACGTCATGGACG
TAACGCAAGCCATGCTCGCGCTGCCAATCAGGCTGCCTGGAACAAGGTTCTACAGAGGCCTACAGGTACCTTTTTTTTTT
CTTCTAATGTTTTTACAGTTTTGCTTATTTCTTTTTACTTTTT-CGCCACTCGAAACCATCACTGTCCGATCTAGATTGA
CTAGATCACTAGATACCAAGATTCGCGCAAGTATGCATGTTTTTAGTTACTACAAATTCACAAGAAGGGAATGATTCCTA
GCTAGATTCTTGGTGTGGAATTGC-T-TTGATGTCAGGCAAGGAAGAGGATCATGGATGCACTGAGGCAAGAAATATGCA
TGAGGCGAGAAAATGGCCTGAAACTAGATCGCCGCGACGACTTTCTGCAGACCCTTCTTCTCAAGAGCCATATGGATTCA
CCTGAAGAAGCGCTCACGGATGAACAGATTCTGGACAACATTTTGACACTCATAATTGCAGGTATAGATATATGTCAGTC
ATAATTCAGTTGTTAACTTGCAAAGACTTAGTTGAAATTTCAATCCAGGTGCATGGGGTAAGTCTTGTTTGTAACTGAGT
GCAGGGCAAGTGACAACAGCAACGGCAATTACATGGATGGTCAAGTACCTGGGCGACAACACAGACCTCCAAGAGAAATT
AAGAGTGAGTGAGGACTGAGGAGTCATTCCATCTCATCTGATCTAACCATCTTACCCATACATAGCCCATGTATGAAGAA
CAAGTTACTTCATTTCTTGATTGCAATTCTCTATCTACATG--TATGCAGTCAATTCAGCTGGATCTGGCATCCAAGCAC
CATGACGCACCTCTTACCCTACAACATCTGAACACCATGGACTACGCATACAAGACAGTCAAAGAATCCTTGAGGATGGC
CACCATAGTTTCTTGGTTTCCAAGGGTGGCACTCAAGGACTGCCAGGTTGCAGGTAACTAAACCTCGCTGATTTTA-TGC
TTTCTCCTTGCTGGAAGCTACAGTTCTATTAACAGAGACAAGTAACAATAGGATTCCACATTAAGAAGGACTGGATCATA
AATGTCGACGCGAGATCCATACACTATGATCCGGCCATCTATGACAATCCAACGCTGTTTGATCCTTCCAGGTTCAATGT
ATGTATTGTTGTAAGCCTGAAGAAATTATAG-------------------------------------------------
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----------TAGATATATATTGTGTTGTGATGTCGACAGATTGATGTTGTTGCTATGGACAGGACGATATGAAGCCATA
CAGCTTCTTGGTCTTTGGAGCAGGCAGCAGAACATGCCTGGGGATGAATCTTGCCAAGATTATGATGCTAATATTCCTTC
ATCGCCTCATCACAAATTTCAGGTCTCAGCTCTAAAGTCAAGTTTCTTTATTTTGATGCAAGGCGCAAACAAGTA-GAGC
TGGAGAGTAAAACTAAAATG-TCTGATGTTTTCAGATGGGAGATGGCAGACCACGATACAAGCCTCGAGAAATGGGCAAT
GTTTCCAAGGCTGAAGAATGGCTGCCCAATTCGGCTCACGCCGATACGCAAGGACAAGATGCACTGATGACTGATGCACA
TCTAGTAAATCTGTCAGGATATGCATCCAATTATGAAGCTATGTGATTTTCCTTAGTTGTTACATACTCCAACAGATGAA
ACAAATTCTTGATTCCTTTTTTTGGATGAGCCAAGATCAAGCCTAGCTAGCTGATAATTTC-AAATAAAGTCAAATAAAA
GAAAGGGACAAGGAAGTGCTGCTGGTCTTTGTGATATTTTA--TGACATGTATGCATGCAGTACGCTAACTTGGTGCAAG
CAGGGCAAACCCTCAGAAATTTCTTTTCAGAGTTGAGATGAATTAAAACCAACAGAACATCAAAGTCTCAGCTAATTCAG
ATAT-----GGACTGAATCATCAATCAATCTGCATACAAGAAATGAAAACTGACCAAAACTGGAATCTACCCAGCATAGT
TTCCCTCCCCTATTTAT---------------------------------------------------------------
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ACTTGGTAGGTTTTAGAACATATTTTTTATGTGCTTAAACAGCTTTTTGCTGGATGTCATTATCTAAATTTCATCAATTC
TGTGTGTGTTTGCACACGTTTTGATTTCAGTTTTTCCCATTGAGACGTCACTTTCTAGATTTCACAGATTCTGTCCTTCG
ATGGTTTTTCGCTCATGAAGACTCTTCCACTTGGACACCTTCTATTTAGAT--ATATCTTATTCAGAGGAAAATAAGTAG
-TTTTCTCAACGTAATACTACACTTACAAAATACTCCCTCTGTCCCATAATGTAAAAACGCCTTAAATTATGGGGCGGAG
GGAGTAGCTGAGTAATAAGAGCAGTAAAGAAGATTCTAACTAAGATGAGACAT---AGATAGTTGGATCTACAGTTTGGC
TTCGATTTCTTCCAGGGTGAGCCCTTTTGTTTCGGGCACAATGCAGAATATGAATGCGAGAGACGCCACCGCAATCACCC
CGAACGAAGCAAAGAGAACCCCAGTGCCAATCAAGTCCTACAGCACAATTCAGAAAAAGGAAAAGATGACT-ACTTGATA
ATACT-AACCTTAAGAAAGGATTAAC
>chr1B_3
--TAATTTTGTTTTGAA-TCGTTTTTATCTGGCTCGAAATTCCGGGGTTTAAAGTATACCCACCAAAAT----ATAATCA
AAAAATCTATTGAAATTACTCTGCATGATAGCTCATTAATCAGATGAACCTTGAATCTGGTCATCATCAATCAAATATAC
TCCCTCCGTTCCTAAACATAAGACCTTTTAGATATTTCAATTTCTTATATTTAGGAACTGAGGGAGTAGAAAAGAGAGCA
GTAATCT-------------------------------------------------------------------------
----------------------------------CCTCCGTGTCTACTTTTCTTCGTCAGCTCCAGTACACTAGTAGCTG
CTCTCTCTCTCTATCTATCTA----TCTCTTTGCGGGAAAGGAACTTTCATTAATCAAACCAAGTGGTTACTTTCACCAG
TAGCTACTCTAGCA---AAGGTAGGTTAATCACACGAATGCGATGGTGAACACGAATGATATGATGATGCATGATCGAAG
GCCATATGCGGCCCATAGATATGCGGGCGACAAGTCATCACTGGTTAAGTTAGTGGGAAATTGGCTGGGTTCCTCTTCCT
CGAGATACTCCTCGACTAGACCAGAATATGCGGCCGTTGAGTCAATGGGAAAACACACAACTCAACTAATAAAGCTGACT
GAACTTTGGTTCGTGCTGGTTGGTCATGTCTGCCTGCCTGCCTGCCTGCCCTGGAAGCTAAGATCATGACGACACACAGC
ACTCGCCATGCA----------AATGGAATGAAACCCGGCATTTCGTCAACTACCC-ATTTGCATGAACAGCGAGATGAT
GATACTCATCTTGAAACGCGAGCGAGGTGAGGCCGAGGACGGCGGGAAAAGATGCGATCGATGCAACTAGCGCAAGTGCG
GTTGGAATCCATCAGATCAGGTATCCTTCCAGGATCCATCGCCATGATTGATCTGGAGAATGGTTGCACCCGACCGACTC
GGTCATATATGGCGCGCGTGCATGCTTGCTTAGATATGCGTGCGTGCCAGCGCCAGT----GTGAAATCACATTAGTAGT
CACTAGCTCGCGAGCGCCGGCCGGAGATGATGTCGACGAT------------GGCGGAGCTGGCATGGCGCTTTGCGGCC
GCACACGTCCTGCTGTTGCCCGCGGC---CGTCGGCGGCATCGCCTACCTCCTCCTCCGCGCTCTACGTGCTTCACAACT
CCGGCAGGATTGCAGGAGCCCGCCGCCGGGAGGCATCGGCGGCTGGTGCCGGGGCGCGGTCGGGGCGGAGACGCTGTCCT
TCCTGGCCGACAACAGCAGCGGCAGGGGCTTCTACCACTTCGTCCACGCCCGCGCGCTCCGGTACGGCGCCTGCTTCCGC
ACCGTGCTCTTCGGCCGCACCCACGTCTTCCTCCTCTCCTCCCGCGCGCGCGCCGCCGCCGCCAGCCTCCTGGCCGCCGA
CCCGCCCCACTTCGCCAAGCGCTACGTGCGCACCGTCGCCGACCTGCTCGGCGAGCACAGCCTCCTCTGCACCTCCCACG
GCGCCCACCGCCGCATGCGCCGCGCCGTCGCGGGCCTCTTCGCCTCCGCGCCCACGGCCGCCTTCGCCGCCGCCTTCGAC
CGCCTGATCACCGCCCGGCTGCTGGCCGACGGCTGCAAGGGCCAGGCCGTCGTGCTGGACGCCGCGCTCGACGTCACCTT
CAGGGCCATCTGCGAGATGCTCATCGGGCCACGGGACGACACGCGCGAGCTGGAGCAGCTGCAGAGCGACGTCATGGACG
TAACGCAAGCCATGCTCGCGCTGCCAATCAGGCTGCCTCGAACAAGGTTCTACAGAGGCCTACAGGTACCCTTTTTTT--
---CTAATGTTTTTACAGTTTTGCTTTTTTCTTTTTACTTTTTTCGCCACTCGAAACCATCACTGTCCGATCTAGATTGA
CTAG--------ATACCAAGATTCGCGCAAGTATACATGCTTTTAATTACTACTGTACATCAC-AAGGGAACGATTTCTA
GCTAGATTCTTTGTATCAAATTGTTT-TTGATGTCAGGCAAGGAAGAGGATCATGGATGCACTGAGGCAAGAAATATCCA
CGAGGCGAGAAAATGGCCTGAAACTAGATCACCGGGACGACTTTCTGCAGACCCTTCTTCTCAAGAGCCATATGGATTCA
CCTGAAGAAGCGCTCACGGATGAACAGATTCTGGATAACATTTTGACACTCATAATTGCAGGTATACATGTATGCAAGTC
CTAATTTAGTTCTTAACTACAAAGACTTTAAGTTATTTTAGCTACAAACAAAGC---------CTTGTTTGTAACTGAGT
GCAGGGCAAGTGACAACAGCAACAGCAATTACCTGGATGGTCAAGTACCTGGGCGACAACACAGATCTCCAAGAGAAACT
AAGAGTGAGCAAGCTGCATATTTG----------------------------------------GCCCATGTATGAAGAA
TAAATTACTTCATTTCTTGATTGCAATTCTCTCTGTATACGTATATGCAGTCAGTTCAGCTGGATCTGGCATCCAAGCAC
AATGATGCACCTCTTACCCTACAACATCTGAACACCATGGACTACGCATACAAGACGGTCAAAGAATCCTTGAGGATGGC
CACCATAGTTTCTTGGTTTCCAAGGGTGGCACTCAAGGACTGCCAGGTTGCAGGTAACTAAACCTCGCTGATTTATTTTC
TTTCTCATTGCTGGAAGCTACC-----ATTAACAGAAACAAGTAACAACAGGATTCCACATTAAGAAGGACTGGCTCGTA
AATGTCGATGCGAGATCCATACACTATGATCCAACCATCTATGACAGTCCGACAGTGTTTGATCCTTCCAGGTTCAATGT
ATGTATTGTTGTAAGCCTGAAGAAATTATACTCCCTCCGATCCATAATACTTGTCGTTCAAACGGATGTATCTAGACGTA
TTTCAGTGCTAGATACATCATAGACGTATTTCAGTGCTAGATACATCGGTTTGAGCGACAACTAATATGAATCGGAGGGA
GAGGGAGTACTAGATTTATATAGTTTTGTGATATAGACAGATTGATGGTATTTCTATGGACAGGATGATATGAAGCCATA
CAGCTTCTTGGCATTTGGAGCAGGCAGCAGAACATGCCTGGGGATGAACCTTGCCAAGATTATGATGCTAATATTCCTTC
ATCGCCTTGTCACAAATTTCAGGTTTCAACTCTAAAGCCAAGTTTCTTTATTTGAT--------GCAAACAGCTA-GAGC
TGGAGAATAAAACTAAAAAATTCTGATGTTTTCAGATGGGAAATGGCAGACCACGATACAAGCCTTGAGAAATGGGCAAT
GTTTCCGAGGCTAAAGAATGGCTGCCCAATTCAGCTCACGCCGATACGCAAGGACAAGATGCACTGA----TGATGCACA
TCTAGTAAATCTGTCAGGATATGCATCCAGTTATGAAGCTATGTGATTTTCCTTGGTTGTTACATACTCCAACAGATGAA
ACAAATTCTTAATTCCTTCTTTTGGATGAGCCAAGATCAAGCCTAGCTAGCTGATAATTTCAAAATAAAGTCAAATAAAA
GAAAGGGACAATGAAGTGCTGCTGGTCTTTCTGATATTTTTATTGACATGTATGCATGCAG-ATGATAACTAGGTGCAAG
CAGGGCAAACCCTCAGAAATTTCTTT-CAAAGCTGAGATGAATTAAAACCAACAGATCGTCAAAGTCTCAGCCAATGCAG
ATATGGATCGGACTGAATCATCAATCAATCTGCATACAAGAAATGAA--CTGACCAAAGCTGGATTCAATCCAGCATAGT
TTCCCTCCCCTATTTAAAAAAGGGTCGATGAAGAATGTGTTTGGAATATGCCCAAGATGCTACCCATGTTCAATGATTTA
TTTAGTAATGTACTTGAACAATCATGGGCAAGTATGTGACTTGCTTATGAAAGTCCATATTCGTCTGTCTAATAAATATT
CTAAATAACGACTAAAGAATGAATATTCCAAATAAGTCCCTAGTCTGAACTCATATGACGATTCAAATTAATTGACCAGC
ATACATATTGATTAATGATCATGTTTCAGAGGTCATTGAAATACAGATGTCTAACTGTTATGGTGCTGCTAGAAGGAGGG
CGCGAGAGGGCCAGCCGGGGGCCTTTCTGCCCACGGCCAGGCAAGAGGGAAGGGATTTCCTTCTTAATTCTTGCTTGATT
AGATTGATACATCTCCTCTCTTTATATAGAGAGGTTTACTTGACTCCCAAGCAAGGCTTACTTGACCCTTAAGCAAGCGA
CCCTTATCTCTAATTAACTCTAAGACTAATGGGTCCATTAAGCCCATTACGTACTCTAACACTACACCCCACCTAAACAT
GCAGCTTGTCCTCGAGCTGCAACCTAACCAACTTATAACCATGACTCGACGCAATACAAACCTAACACCTAAAAACAAGC
CTTTTACATCTCGGCTTATTTTATTATTCTCAACCTAAAATGGACTGGGACGCTTTATTTTGGACCCCTTAACAAAAAGT
GGACACCATCCGCACGTCGGACGTGCACGTGTACAGCCACCTGGATCCCATGGACACCACCTGGACAAAAGGAGTGCATG
TGTATGACCACCTGAAAGTGGTCGCAAGAGTGACCAGCAAAGGCGCCCTCGCGGCGGTCGGTGGCGGAATGCAGTGGTGC
TACGCGGTGCGCTGCTGTCGGTGACATCATGCCTTCTCCCTGCCGGACGGCTGTTGGTTTGCACCGCACAGGGAAGAGTG
GAGGGCTTGCGATGGAGAATGACAAGGAGGGGTGCGCCCCCCCAACCGCCGATGTCGCAGACTTTGAGGTCGCTGCCCGC
GGGGAAAACAGCATGCCCCCGCCCGTGGGGGAAACCGCATGCCCAAGATCCCCGACGCAGCGGATGAGGTCGGGGTCCTT
TGCGCAGCAAAGGGCAACTTGGAGGAGCGGCAGCTGCAGACCACGCATCTCCCGCACACACCGACGCGCTAGGAGGCCGC
GCGCAGCAGCCTGCAGCCTCACCGCCGCCGACATGTGGCGGGTAGCAATCCAAGACGGAAGCGGTGACGGCGACGGCGGG
GACAGGACTTGGTGAAGTGGGACTCCCGCCGGTGCGGTCGATGCGGGGCCGGAGCTGACAGGCGGTGGCTGCTGCAGCTG
CAGCGATTGCTGCGGTGGCGCACCGGGCAACGGCAGCGGCTGCTGCGGCGAAGCGCCGGGCGCGGCGGAGGCCGCCAGGA
GCAGCGGGTACCACTGCAGCCAGGGCTGGGCAGTGGTGGCGATGGATGGCAGCTGCAGTGGCCCGATGAGCGCGGCGAAG
GCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTGGCGGCGGTCGGCGGCGGCCCGTAGGGGCTGGCCAGGTACAGTCGGATCCCCTGGACG
GCTGTGACGAGGTCGTTGAGGACCCCGGTAATCTCCTCCGGGGTGTAGGCGGCGGCCGGTGGTGCGGTGGAGGGCGTCGG
CATCTGGGCGGTGGCGGCGCCGGAGGATGCGACCAACGGCATGGACGAGGAGGGCAGCGGCGCGGTGTAGATGGCCAGCG
GCGCGGTGGTGACGGTCGGCAGCGGAAGCGACGGGGCGGGCGGCGGCGAAGACATGATCGGAACTGAGCTACCTGATACC
AAATTGTTATGGTGTTGGTAGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGTCTTTCTGCCCACGGCCGGGCAAGAGGGAA
GGGATTTCCTTCTTAATTCTTGCTTGATTAGATTGATACATCTCCTCTCTTTATATAAAGAGGTTTACTTGACTCCCAAG
CAAGGCTTACTTGACCCCTAAGCAAGCGACCCTTATCTCTAATTAACTCTAAGACTAATGGGCCCATTAGGCCCATTACG
TACTCTTAACACTCCAAATTGTTATGGTGCTGCTAGAAAGAGGGCGCGAGAGGGCCGGCCGGGGGCCTTTCTGCCCACGG
CCGGGCAAGAGGGAAGGGATTTCCTTCTTAATTCTTGCTTGATTAGATTGATACATCTCCTCTCTTTATATAGAGAGGTT
TACTTGACTCCCAAGCAAGGCTTACTTGACTCCTAAGCAAGCGACCTTATCTCTAATTAACTCTAAGACTAATGGGCCCA
TTAGGACCATTACGTACTCTAACACTAACCAATTGTATGGGCACATCTGCACATGCTAGGGAACATGGGATT--------
-----GTTAGACAATGCAAGTACATTGTATCTTATATAATTGTTACTCATAGGTCGTGTACAATATGTATTAG---TCTC
CATAGATTTTAAATTGTCATGTGTATTTGAGTTGTGTAATGGC---------------------TACTCAATAATTGGGC
AGATTAAAAAGTTAGCCTAGTTAAGGATATTCCTGTCAGATAATCAAAAAAAGGCCGAGCTTATTTCTACC-AAAAAAAG
AAGGTCGAACTGATTCCTGATTTTATATACTTCC-------------------------------------------TAC
TGTGTTTCGCCAGAGATGTTTCTCAGGCAATACCATTTTTTTTCTGAAATTTCATCTAACT-CATGGGTGTTGGTACAGA
ACTTTTTTGGTATGCCCTCGAACAATATTTTGCTTGAGAGTATCTTTCCAATAGAACCTCATTTTTCACGTATATCACAA
ACTTGGTAGGTTTT-----------TTTATGTGCTTAAACAGCTTTTTGCTGGATGTCATTATCTAAATTTTCATCGATT
C-TGTGTGTTTGCACACGTTTTGATTTCAGTTTTTTCCATTGAGACATCATTTTCTAGATTTCACAGATTCTGCCCTTCG
ACAGTTTTTCCCTCATGAAGACGCTTCCACTTGGACACCTTCTATTTAGATATATATCTTATTCAGAGAAAAATAAGTAG
-TTT-CTCAATGTAATACTACGCTTACAAAATA-----------------------------------------------
------GCTGAGTAATAAGAGCAGTAAAGAAGATGCTAACTAAGATGAGAC--TACAGATAGTTGGATCTACAGTTTGGC
TTCGATTTCTTCCAGGGTGAGCCCTTTTGTTTCGGGCACAATGCAGAATATGAATGTGAGAGACGCCACCGCAATCACCC
CGAACGAAGCAAAGAGAACCCCAGTGCCAATCAAGTCCTACAGTGCAATGCAGAAAAATGAAAAGATCACTAACTTGATA
GTACTAAACTTTAAGAAAGGATTAAC
>chr1A_6
TTTTGTTTG-----GAATTCGTTTTTACCTGGCTTGAAAATTTGGGGTTTAAAGTATTTCAGTACCCACCGTAATAATCA
TTTTTTTTTGTAAAATTACTCTGCGTGATAGCTCATTAATCAGATGAACCTTGAACCTGATCAATA--------------
------------------------------------------------------------------TATAAAAGACAGCA
GTAGTCTCCTCTAGCATGAGAAAAGTTTCAGGTTTTTTTTTTTGATATTTTTCACTATTTATTTCGATTTACTGTTCACC
GGTAGATGAGCCCCGGGCTCCAGTTGAATTATCGCCTCCGTGTCTACTTTTCTTCGTCAATCGTCAAGCTCCATTAGTAC
------------------------------------------------------------------------TTCACTAG
TAGCTACTCTAGCTAGGAAGGTAGGTTAGTCACACGAATGATATGATG----------------------ATGATCGAAG
GCCATAT---GCCCATAGATATGCGGGCGACAAGTCATCACTGGTTAAGTGAGTGGGAAATTGGGTGGGTTCCTCTTCCT
GGAGATACTCCTCGACTGGACCAGAATATGCGGCCGTTCAGTCAATGGGAAAACACACAACTCGACTAATAAAGCTGACT
GAACTTTGGTTCGTGCTGGTTGGTCATATCTGCCTGCCTGACCTGTGA-CCTGGAAGCTAAGATCATGACGACACACAGC
ACCCGCCATGCAAATGGAATGGAATGAAATGACATCCCGCATCTCGTCAACGTACTTATTTGCGTGAACAGAGAGACGAT
GATACTCATCTTGAAACGCAAGCGAG----------GGACGGCGGGAAAAGATGCG----ATGCAACTAGCGCAAGTGCG
GTTGGAATCCATCAGATCAGGTATCCCTCCAGGATCCATCGCCATGATTGATCTGGAGAATGGTTGCACCA----GACTC
GGTCATATAT--CGCGCGTGCATGTCTGCTTAGATATGCGTGCGTGCCAGCGCTAGCGCCAGTGAAACCACATTA---GT
CACTAGCTCGCGCGCGCCGGCCGGAGACGATGTCGACGTCGACGCCGACGACGGCGGAGCTGGCATGGCGCTTCGCGGCC
GCTCACGTCTTGCTGTTGTTACCGGTAGTCGTCGGCGGCATCGCCTACCTCCTCCTCCGCGCCCTACGCGCTTCACAACT
CCGGCAAGAAGGCAACAGCCCGCCGCCGGGGGGCATCGGCGGCTGGTGCCGGGGCGCGGTCGGGGCGGAGACGCTGTCCT
TCCTGGCGGACAACAGCAGCGGCAGGGGCTTCTACCACTTCGTCCAGGCGCGCGCGCTCCGGTACGGCGCCTGCTTCCGC
ACCGTGCTCTTCGGCCGCACCCACGTCTTCCTCCTCTCCTCCCGCGCGCGCGCCGCCGCCGCCAGCCTCCTGGCCGCCGA
CCCGCCCCACTTCGCTAAGCGCTACGTGCGCACCGTCGCCGACCTGCTCGGCGAGCACAGCCTCCTCTGCACCTCCCACG
GCGCGCACCGCCGCATGCGCCGCGCCGTCGCGGGCCTCTTCGCCGCCGCGCCCACGGCCGCCTTCGCCGCCGCCTTCGAC
CGCCTGATCGCCGCCCGGCTGCTGGCCGACGGCTGCACGGGCCGGGCCGTCGTGCTGGACGCCGCGCTCGACGTCACCTT
CACGGCCATCTGCGAGATGCTCATCGGGCCACAGGAGGATGCACATAAGCTGGGACAGCTGCAGGCCGACGTCATGGACG
TAACGCAAGCCATGCTCGCGCTGCCAATCAGGCTGCCTGGAACAAGGTTCTGCAGAGGCCTACAGGTACCCTTTTTTTTT
CTTCTAATGTTTTTACAGTTTTCCTTATTTCTTTTTACTTTTTCCGCCACTCGAAACCATCACTGTCCGATCTAGATTGA
CTAG--------ATACCAAGATTCGCGCAAGTATACATGTTTTTAATCACTACAAATTCACAAGAAGGGAATGATTTCTA
GCTAGATTCTTGGTGTGGAATTGC-TGTTGGTGTCAGGCAAGGAAGAGGATCATGGATGTACTGAGGCAAGAAATATTCG
TGAGGCGAGAAAATGGCCTGAAACTAGATCGCCGCGACGACTTTCTGCAGACCCTTCTTCTCAAGAGCCATATGGATTCA
CCTGAAGAAGCGCTCACGGATGAACAGATTCTGGATAACATTTTGACACTCATAATTGCAGGTATACATGTATGCAAGTC
CTAATTTAGTTCTTAACTATAAAGACTTTCTAAGTTGTTAGCTACAAACAAACC---------CTTGTTTGTAACTGAGT
GCAGGGCAAGTGACAACAGCAACAGCAATTACATGGATGGTCAAGTACCTGGGCGACAACACAGATCTCCAAGAGAAACT
AAGAGTGAGTGAGCTGCATATTTG----------------------------------------GCCCATATATGAAGAA
TAAATTACTTCATTTATTGATTGCAATTCTCTCTGTATATGTATATGCAGTCAGTTCAGCTGGATCTGGCATCCAAGCAC
AATGATGCACCTCTTACCCTACAACATCTGAACACCATGGACTACGCATACAAGACGGTCAAAGAATCTCTGAGGATGGC
CACCATAGTTTCTTGGTTTCCAAGGGTGGCACTCAAGGACTGCCGGGTTGCAGGTAACTAAACCTCTCTGA-TTTA-TTC
TTCCTCCTCGCTGGAAGCTACT-----ATTGACAGAGACAAGTAACAACAGGATTCCACATTAAGAAGGACTGGATCGTA
AATGTCGACGCGAGATCCATACACTATGATCCGGCCATCTATGACAATCCGACGGTGTTTGATCCTTCCAGGTTCAACGT
ATGTATTCTTGTAAGCCTGAAGAAATTATAG-------------------------------------------------
--------------------------------------------------------------------------------
----------TAGATATTTATTGTTTTGTGATGTAGACAGATTGATGTTGTTGCTATGGACAGGATGATATGAAGCCATA
CAGCTTCTTGGTATTTGGAGCAGGCAGCAGAACATGCCTGGGGATGAACCTTGCCAAGATTATGATGCTAATATTCCTTC
ATCGCCTTGTCACAAATTTCAGGTTTCAACTCTAAAGCCAAGTTTCTTTATTTGAT--------GCAAACAGATATGAGC
TGGAGACTAAAATTAAAAT-TTCTGATGTTTTCAGATGGGAGATGGCAGACCACGATACAAACCTTGAGAAATGGGCAAT
GTTTCCGAGGCTCAAGAATGGCTGCCCAATTCAGCTCACGCCGATACGCAAGGACAAGATGCACTGATGACTGATGCACA
TCTAGTAAATCTGTCAGGATATGCATCCAATTATGAAGCTATATGATTTTCCTTAGTTGTTACATACTCCAACAGATGAA
ACAAATTCTTAATTCCTTTTCTTGGATGAGCCAAGATCAAGCCTAGCTAGCTGATAATTTCAAAATAAAGTCAAATAGAA
GAAAGGGACAATGAAGTGCTGCTGGTCTTTGTGGTA-TTTTATTGACATGTATGCATGCAGTATGATAACTTGGTGCAAG
CAGGCCAAACCCTCAGAAATTTCTTT-CAGAGCTGAGATGAA----AATCAACAGATCATCAAAGTCTCAGCTAATTCAG
ATAT-----GGACTGAATCATCAATCAATCTGCATACAAGAAATGAAAACTGACCAAAGCTGGAATCAATCCAGCATAGT
TTCCCTCCCCTATTTAGAAAAGGGTCGATGAAGAATGTGTTTGGAATATGCCCAAGATGCTA-CCATGTTCAATGATTTA
TTTAATAATGTACTTGAACAACCATGGGCAAGTATGTGACTTGCTTATGAAACTCCGTATTCATATTTATAAT-------
----------ACTAAAGAGTGAATATTCCAAATAAGTCCCCAGTCTGAACTCATATGACGATACAAAATAATTAACCAGC
ATACATATTGATTAATGATCATGTTTCAGAGGTCATTGAAATACAGATGT------------------------------
--------------------------------------------------------------------------------
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------------------------CTAACCAATTGTATGGGCACATCCGCACATGCTAGGGAACATGGGATTGTACCGAC
CCACCGTGAGACACTGCAAGTGCATTGTATCT----TAATTGTTACTCATAGGTCGTATACAATACTATGTATTTATCTC
CATAGATTTTAAATAGTCAACTGTATTCGAGTTGTATAATGGCTTGCTTAGGGATTGCCAAATGTACTCAATAATTGGGC
AGATTAAAAAGTTAGCCTAGTTAAGGATAATC--------------AAGAAAGGCCAAGCTTATTTCTACCAAAAAAAAG
AAGGTCGAACTGATTCCTGAGTTGGTACATAATTTGCCCAATTTTCGATGATTACATGAGTTGGTACATAATATATATAC
TGCGTTACGCCAGAGATGTTTCTCAGGCAATACCATT-TTTTTCTCAAATTTCATCTCACTACATGGGGGTTGGTACAGA
ACTTTTTTGGTACGTCCT--AACAATATTTTGCTTGAGAGTATCTTTGCAATAGGACCTCATTTTTCACGTATATCACAA
ACTTGGTAGGTTTTAGAACATATTTTTCATGTGCTTAAACAGTTTTTTGCTGGATGTCATTATCTAAATTTTCTCGATTC
TATGCGTGTTTGCACACGTTTTGATGTCAATTTTTTCACG---------ATTTTCTACATTTCACAGTTTTTGCCCTTCG
ATGTTTTTTCGCTCATGAAGACCCTTCCACTTGGACACCTTCTATTTAGAT--ATACCTTATTCAGAGGCAAATAAGTAG
TTTT-CTCAATGTAATACTACACATACAAAATA-----------------------------------------------
------GCTGAGTAATAAGAGCAGTAAAGAAGATGCTAACTAAGATGAGAGATTACAGATAGTTGGATCTACAGTTTGGC
TTCGATTTCTTCCAGGGTGAGCCCTTTTGTTTCAGGCACAATGCAGAATATGAATGCGAGAGACGCCACCGCAATCACCC
CAAACGAAGCAAAGAGAACCCCGGTGCCAATCAAGTCCTACAGCACAATGCAGAAACACGAAAAGATCACTAACTTGATA
GTACT-AACCTTAAGAAAGGATTAAC
>SNPs
-S------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
------S---------S---------------S------S-S---------S------S---------------S-----
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------S---S-SSSSS----------------------------------------------------S--
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------------S----------------------------------------------------------S----
---S------------S----------------S-----------SS---------------------------------
---------------------------------------------------------SS---------------------
---S-----------------------------S------------------SSSSSS-S--------------------
--------------------------------------------------------S-----------------------
-S--------S---------------------------------------S-----------------------------
-----------SS--SSSS-SS-SS-S---------------------------S-------------------------
---------------S----------------S------S-------------------------------S--S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------S-----------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
----SSSSSSSS----------------------S----------S------------------------------S---
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------------S------------------------------S--S----SS----
S-----S----S------SSS--SSSS---SS---SS--SSSSS-S-SSSSSSSSSSSSSSSS-----------------
-----------------------S-----------------------------------------S------------S-
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
S--S----------------------------S-S--S---------------S--------------------------
S----S--------------------------------------------------S-----------------------
------------------------------------------------------------------------------S-
---------------------SSSSSS---------------------S----------------------------S--
--------------------------------------------------S---S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S---------S------------------------------S--------------
------------S-----------------------------------S-------------------------------
-------SS---------------S---S--------S---------------SSSSSSSSSSS-------SS-------
------S------------S---------------------------------------------S--------------
------S-----S-------------------S-----------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------S----------------------------S----------------------S-S--------------
--------------------------S-----S-----------------------S-----------------------
----------------------------------------------------------S--------S-S----------
----------------S---------------------------------------------------------------
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-----------------------------------------------------------------------SS--S----
-S---------------------------------S----------S---S----------------------S------
----------------------S---------------------------------------------------------
----S-----S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS----------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--------S--------S------------
S-------------------------
>forward_934
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----------------------------------GAGGACGGCGGGAAAAGAAA--------------------------
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>reverse_2158
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-----------------------------------------------------------------------------GCA
TGAGGCGAGAAAATGGC---------------------------------------------------------------
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>forward_935
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-----------------------------------AGGACGGCGGGAAAAGAAAG-------------------------
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>reverse_2361
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----------------------------------------CAATCCAGGTGCATGGGGTA--------------------
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>forward_936
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------------------------------------GGACGGCGGGAAAAGAAAGA------------------------
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>reverse_2641
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CATGACGCACCTCTTACCCT------------------------------------------------------------
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>forward_2380
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----------------------------------------CAATCCAGGTGCATGGGGTA--------------------
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>reverse_3341
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------------------------------------------------------------AGGCGCAAACAAGTAGAGCT
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>forward_2382
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------------------------------------------ATCCAGGTGCATGGGGTAAG------------------
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>reverse_3744
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---------------------------------------------------------------CGCTAACTTGGTGCAAG
CAG-----------------------------------------------------------------------------
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--------------------------
