>input_sequence_36171
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--------------------------------------------------------ATGGAGGACTGTGCAGCCACCCCT
GTTCGCCGCCCTGCCGACCCCTCTTCCCCATCCCCAACCCCAACCC------CATCTCCCTTATCTCTGCGCCAGTGGCG
CCCAGCGGCGCAGCGCAACCTGCGCAACCAGTGGTCGCGCCTGCTTGCCGCCAAGACCCGGTGGCTGGACGCCGCCGCCA
GCGGCCGCTCCCATGCCGCCACGCTCGTCAACGCCTACCTCTCCCGCAGGTCGCCCCCTCTCTGGCTCTGTGTTTCGGCG
ACGCTTGAGTTTTTGAGATTTTATTAACTAGTTACTGACTGCGCCTTGTGCTTGTCATTTTGTCAGTTACATGCCAGGGA
TGGATTTGGGGGTGCTCAAGGGCATGCCCAGGATCCGCGACAGGGCGAGCGCCAAATTGACCCACAAGGAGGTAGCTACG
CTGTCGCCAGGAACTCAGCCAATCCTCCTCAGCAGC--ATGGTTTAATTTTCTTGTTCATCCCCTCATTTTCATGTCCCT
TGCTTGGTTCAGGTGCAATGCCGCGAGATGCTTCTATCAGCCTACAAGGAGATGGTAATGCTTCATACAAAGCCCATGCT
TGTTCATGTCATTTTAGCCGGGACCCTGTAAGCCATTAATGGTTGTTTGACTTTTGGTGCTCTTCCTATTTCTTGGTAAT
AGGTCTGTGCCATGTCCGACTTGGTTAAAGCTTCTCATGCCATGCGGTGTTTCTCCAAAGTATCTTCTGGTAGCCCACTA
GTCCGATTTACTGATCGGCAGGATGATTTGAATGATTTAGGGGATGGTGGAGGAGCTCCAGTATACAGATGGATCTCCAT
GTTAGAATTTGGTGGGTTACTCGCATTTTTTTA-TGCAAAACTGGATTAAGTTCCGTAATCTTTATTTCCCCTTCCCACG
TGACATTACTTGCTTTTAAGAGATTCAGAAATTTTTATTCTGAAAGACGTACTAGGATTCGGATAGACAGATGAACTTTC
TTTTCATTTGTGTTTGGCATGACAGAAATGCATTCTTGGAATCAATTTTGTGTAGTTTGGGAAATAGCTCCAACTTAGTC
AGAAAATCAAGTGAATTTTATATAGTTAGTAAATAATTTGCAAGTTATTCAGTGTAGCACTGCCACATTAGATCAAGTTG
ACTGAATAAATATCTGGTTTCTTATATCCAAAGTGATTTGTCCGTAATTTCTTTCTAAAATAGCTACTCAAGATCAGATC
TTTCTGATCCAGCAAGATACGGCTAATATATTGATTTGTTGTTATTCGTGACTTGATCTCAGAAAACCTCGCCAAAGAGC
TTGTTGAGATGTTTGTTTCAGAGCTACGATTGAAGGTATGCCATCACACAATTCTGCTATGTTTTAGCTTGTGCACTTAG
AAATCGCATTTTTTTACATCCCTGTTTCTCCTGAACTTTTGGAAAAATCCTGACAGTGGAAATCATTTTTAATGTAGAGA
CTGATTGTCTTGGACCTCCTGTCAATTAACTTAAAAGAAGGTGCAGATCCTTCATTAGAATGGTCAGATGAGTTATATGA
CGGGGAATTCAATGAATTTCAGAGGATTGGCCTGGGGTCTGGAGACAGCTTCCCACTACCTGAGAATTGGAAGGCTGATG
TCTTACAGGCACAGCGACCTGGACATACCCCATCCCATGAGGTTTTACAGGTGTTGATCCAATTTTTGCAATAGCTTTGC
ATTTATTCCCTTAGAAATCAACTGTCTCTGTCCTGATGTTTAGATCTTTTAATTGTTTGTTTGGTAGACATAGCATTGTG
TTGGCTCATTGTAAATAAAGGATGAGAGCACCATCTTTGGATTAGATCAAATGTGTTGTGCTCATTGCAGCATGCTTTCT
AACAAGGGTTGTGTCTTTTCAATTATTATTTTA--CAGGTTTATTTAACCTCTTGGCTTGCTAATGTGAACATCAAGACG
AGTAGGTAATTGCTCCATCTGCTTTAGCTTT-GGATTTTACAAACTA---------------------------------
---------------------------------------------------------------------GTATAAGGATA
CCTGAATTTCGAAATTAAGCTGTATCATATACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAATTGAACTA
AAACCACGATGAGTAATTTGGAACGGAGGGAGTACTAGTTTTGTTGATAGTGTGATAGTATTGATCTCTTGATTTTATTT
TCAGAATTGACGAAATATTTGAGCTTGTTGAGGAAGAGATGCAGATCAAATTGCGTTGA---------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr1A_1_TraesCS1A01G316100
AGGCTTCTCTTACGCAATTGAGAATTTTAGTACTCCCTCTGTCCGGAATTACTTGTCCACAAATGGATAAAAGTAAATGT
ATCCAGAACTAAAATATGTCTAGATACATCCATTTCTATGACAAGTATTTCCGGACGGAGGGAGTATGTCTGTAAGACCA
TATTGATCTATTTCTATCTGCTATTGGTAAATTAATTAGAACGTTGGCATGTCATATTCGTTGTCAAAAGAAAAAGTTGG
ACCACCCTGCTCGTTAGGGCCCCTTTA-------TTGTTTATGTGACAATGTACGAGACTTGACTTATGTGATTAATTTA
GTAGGATAGCAAAATTTGATTATTGGCTAGCACACAGGTTTGATTTTGACCTGCAAAAACTGAGATGCAGAGTAAATCA-
CATTCATTGAGATTTACTGACCCGATACAAGAAATGGGTGGAAAGATAATACAAAGAATGAGAATTAGGAGAAGACAATA
CAGTAATGGTC---CTTCTGAATCGTCCTTGTTGAGAGAGACTTGAGACAATTTGATGGACCAAATGCATATGTGAATG-
-GTATCGTTGATGTTGGACCTTGCTGGACTTTCTTCTTTCG-ATTTGTGAATTGTTGATCAGTGCATGCCTATATTATCT
TGTAGTATATGGTAATGTATTGCTAGTTCTTTAGCAAAGGTCATGTCATATGTTTCTTGCACCGAGCCTTGACCAGCTTG
CGTGCTTCACGAGCTTGGCCGGAGGCTTGGGCCTGGCTTGTTGTATCTTCGAGCCCTGAGCTTTCTGTCCAGCCCTAGTT
GTGTTGTAATATTTGGAAATTTCAAACATTTTTAGTTAACTCTAATGTTGTGAGACTTGATTAAGCTATTCATATTGCTC
TTCTGGTCAATTTCTTATTACTGTGTTATGTCGGTTT-T-TTTGTAGGTGGCCCACTGGATTATTTGTTTCTAGCTCAGC
CACTGCCTCAGAATAGTTTAGGACCTGAGAAGTCCTTTACTCCATTAGGCAAAACAATGGAGGACTGTGCAGCCACCCCT
GTTCGCCGCCCTGCCGACCCCTCTTCCCCATCCCCAACC------CCAACCCCATCTCCCTTATCTCTGCGCCAGTGGCG
CCCAGCGGCGCAGCGCAACCTGCGCAACCAGTGGTCGCGCCTGCTTGCCGCCAAGACCCGGTGGCTGGACGCCGCCGCCA
GCGGCCGCTCCCATGCCGCCACGCTCGTCAACGCCTACCTCTCCCGCAGGTCGCCCCCTCTCTGGCTCTGTGTTTCGGCG
ACGCTTGAGTTTTTGAGATTTTATTAACTAGTTACTGACTGCGCCTTGTGCTTGTCATTTTGTCAGTTACATGCCAGGGA
TGGATTTGGGGGTGCTCAAGGGCATGCCCAGGATCCGCGACAGGGCGAGCGCCAAATTGACCCACAAGGAGGTAGCTACG
CTGTCGCCAGGAACTCAGCCAATCCTCCTCAGCAGC--ATGGTTTAATTTTCTTGTTCATCCCCTCATTTTCATGTCCCT
TGCTTGGTTCAGGTGCAATGCCGCGAGATGCTTCTATCAGCCTACAAGGAGATGGTAATGCTTCATACAAAGCCCATGCT
TGTTCATGTCATTTTAGCCGGGACCCTGTAAGCCATTAATGGTTGTTTGACTTTTGGTGCTCTTCCTATTTCTTGGTAAT
AGGTCTGTGCCATGTCCGACTTGGTTAAAGCTTCTCATGCCATGCGGTGTTTCTCCAAAGTATCTTCTGGTAGCCCACTA
GTCCGATTTACTGATCGGCAGGATGATTTGAATGATTTAGGGGATGGTGGAGGAGCTCCAGTATACAGATGGATCTCCAT
GTTAGAATTTGGTGGGTTACTCGCATTTTTTTA-TGCAAAACTGGATTAAGTTCCGTAATCTTTATTTCCCCTTCCCACG
TGACATTACTTGCTTTTAAGAGATTCAGAAATTTTTATTCTGAAAGACGTACTAGGATTCGGATAGACAGATGAACTTTC
TTTTCATTTGTGTTTGGCATGACAGAAATGCATTCTTGGAATCAATTTTGTGTAGTTTGGGAAATAGCTCCAACTTAGTC
AGAAAATCAAGTGAATTTTATATAGTTAGTAAATAATTTGCAAGTTATTCAGTGTAGCACTGCCACATTAGATCAAGTTG
ACTGAATAAATATCTGGTTTCTTATATCCAAAGTGATTTGTCCGTAATTTCTTTCTAAAATAGCTACTCAAGATCAGATC
TTTCTGATCCAGCAAGATACGGCTAATATATTGATTTGTTGTTATTCGTGACTTGATCTCAGAAAACCTCGCCAAAGAGC
TTGTTGAGATGTTTGTTTCAGAGCTACGATTGAAGGTATGCCATCACACAATTCTGCTATGTTTTAGCTTGTGCACTTAG
AAATCGCATTTTTTTACATCCCTGTTTCTCCTGAACTTTTGGAAAAATCCTGACAGTGGAAATCATTTTTAATGTAGAGA
CTGATTGTCTTGGACCTCCTGTCAATTAACTTAAAAGAAGGTGCAGATCCTTCATTAGAATGGTCAGATGAGTTATATGA
CGGGGAATTCAATGAATTTCAGAGGATTGGCCTGGGGTCTGGAGACAGCTTCCCACTACCTGAGAATTGGAAGGCTGATG
TCTTACAGGCACAGCGACCTGGACATACCCCATCCCATGAGGTTTTACAGGTGTTGATCCAATTTTTGCAATAGCTTTGC
ATTTATTCCCTTAGAAATCAACTGTCTCTGTCCTGATGTTTAGATCTTTTAATTGTTTGTTTGGTAGACATAGCATTGTG
TTGGCTCATTGTAAATAAAGGATGAGAGCACCATCTTTGGATTAGATCAAATGTGTTGTGCTCATTGCAGCATGCTTTCT
AACAAGGGTTGTGTCTTTTCAATTATTATTTTA--CAGGTTTATTTAACCTCTTGGCTTGCTAATGTGAACATCAAGACG
AGTAGGTAATTGCTCCATCTGCTTTAGCTTT-GGATTTTACAAACTA---------------------------------
---------------------------------------------------------------------GTATAAGGATA
CCTGAATTTCGAAATTAAGCTGTATCATATACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAATTGAACTA
AAACCACGATGAGTAATTTGGAACGGAGGGAGTACTAGTTTTGTTGATAGTGTGATAGTATTGATCTCTTGATTTTATTT
TCAGAATTGACGAAATATTTGAGCTTGTTGAGGAAGAGATGCAGATCAAATTGCGTTGAAGATTTCGATTCATAGAATTT
AAGTGGGAACCATTCGGGAATG-------------TTCAGGGGTTCTTTTTCATTAACGGAAGTGATTTAGGCTATTTAG
CCAGTGTGATCTTCCCTAAGAAAGAGGGCTCATATATAATACTTCTCAAATGCATTACTGTTAGCTTGAATACAGTTTGT
GTAACAAGGCTGAGCCACGAGCCCACCGGCTCCTCAAAATCCAGAATGTCTTGCCTTGCCCCTGTGGTTGGCGTTCCATG
GAGTACGTAGTAGCTGAAAACAGCCTGACACTGGACTCTGCTTCTAGTGCTGATTTCAGGATCTGCTGGGAAGACGTGGG
AGAGAAATCAAGCACAGTGTGGGCGAGTATCCGAGTTTCTCCATGTTCTCGTGGAAGTTATATATGACAGGGAATCTCCC
TGGCCTTGTTTTGGGTGGCGCCGCCTCGCCCGTTTCCAGCAGGACTCTTCTTCTCCGGCCACA---AATTCGAAGCTAAA
GAAAATGCCATTGCCATGGAGGAGCAATTCACTAGTGCTCGCCCAAGGTTCGATGCTAGTAGTAGA--------------
--------------------------------------------------------------------------------
-------------------------------------------------------CAGGAGGAGCCCAGCTTATTATTGG
CAGTAGCAT-----ATATCATGATTGGCTGGAAGGAAGAGAGCAGAGGAGTCAGGAGGAGGACCCCAGAGCTCTGTTGAA
CGTGCCCATGCATGCTGCCCC------------------GGACAAACGAAACGATCCAGGAGCTTTGTCTGCCGCATGCC
CTTGCCCTTGCCCTTGCCCTGTTCCATTCCACTC-----CATTTAAAGAGGGAGATG---GAAAAAGAAACTGGACGTCC
ACATGAGATATCACGTCCCTGTTCCCGGGCGGGACACTGGTCAACCATGTGGCT-----CCTGCAGTGCCTCTCTGAATT
AAAAGAGGTAATAGCATCCCAGGTACCCTAACTTGCATAAGATGTGATATTTTAGTCCTAAAATTGCAAAACTCAATCCC
ATTATACCCTAACTTACACCTCATGTGATGTTTTAGTCCCAGGCCAATCAGAGGACGACA
>chr4A_1
AGGCTTCTCTTAGGCAATTGAGAATTTTAGTACTCCCTCCGTCCGGAATTACTTGTCCACAAATGGATAAAAGTAAATGT
ATCCAGAACTAAAATATGTCTAGATACATCCATTTCTATGACAAGTATTTCCGGACGGAGGGAGTATGTCTGTAAGACCA
TATTGATCTATTTCTATCTGCTATTGGTAAATTAATTAGAACGTTGGCATGTCATATTCGTTGTCAAAAGAAAAGGTTGG
ACCACCCTGGTCGTTAGGGCCCCTTTA-------TTGTTTATGTGACAATGTACGAGACTTGACTTATGTGATTAATTTA
GTAGGATAGCAAAATTTGATTATTGGCTAGCACACAGGTTTGATTTTGACCTGCAAAAACTGAGATGCAGAGTAAATCG-
CATTCATTGAGATTTACTGACCCGATACAAGAAATGGGTGGAAAGATAATACAAAGAATGAGAATTAGGAGAAGACAATA
CAGTAATGGTC---CTTCTGAATCGTCCTTGTTGAGAGAGACTTGAGACAATTTGATGGACCAAATGCATATGTGAATG-
-GTATCGTTGATGTTGGACCTTGCTGGACTTTCTTCTTTCG-ATTTGTGAATTGTTGATCAGTGCATGCCTATATTATCT
TGTAGTATATGGTAATGTATTGCTAGTTCTTTAGCAAAGGTCATGTCATATGTTTCTTGCACCGAGCCTTGACCAGCTTG
CGTGCTTCACGAGCTTGGCCGGAGGCTTGGGCCTGGCTTGTTGTATCTTCGAGCCCTGAGCTTTCTGTCCAGCCCTAGTT
GTGTTGTAATATTTGGAAATTTCAAACATTTTTAGTTAACTCTAATGTTGTGAGACTTGATTAAGCTATTCATATTGCTC
TTCTGGTCAATTTCTTATTACTGTGTTATGTCGGTTT-TTTTTGTAGGTGGCCCACTGGATTATTTGTTTCTAGCTCAGC
CACTGCCTCAGAATAGTTTAGGACCTGAGAAGTCCTTTACTCCATTAGGCAAAACAATGGAGGACTGTGCAGCCACCCCT
GTTCGCCGCCCTGCCGACCCCTCTTCCCCATCCCCAACC------C------CATCTCCCTTATCTCTGCGCCAGTGGCG
CCCAGCGGCGCAGCGCAACCTGCGCAACCAGTGGTCGCGCCTGCTTGCCGCCAAGACCCGGTGGCTGGACGCCGCCGCCA
GCGGCCGCTCCCATGCCGCCACGCTCGTCAACGCCTACCTCTCCCGCAGGTTGCCCCCTCTCTGGCTCTGTGTTTCGGCG
ACGCTTGAGTTTTTGAGATTTTATTAACTAGTTACTGACTGCGCCTTGTGCTTGTCATTTTGTCAGTTACATGCCAGGGA
TGGATTTGGGGGTGCTCAAGGACATGCCCAGGATCCGCGACAGGGCGAGCGCCAAATTGACCCACAAGGAGGTAGCTACG
CTGTCGCCAGGAACTCAGCCAATCCTCCTCAGCAGC--ATGGTTTAATTTTCTTGTTCATCCCCTCATTTTCATGTCCCT
TGCTTGGTTCAGGTGCAATGCCGCGAGATGCTTCTATCAGCCTACAAGGAGATGGTAATGCTTCATACAAAGCCCATGCT
TGTTCATGTCATTTTAGCCGGGACCCTGTAAGCCATTAATGGTTGTTTGACTTTTGGTGCTCTTCCTACTTCCTGGTAAT
AGGTCTGTGCCATGTCCGACTTGGTTAAAGCTTCTCATGCCATGCGGTGTTTCTCCAAAGTATCTTCTGGTAGCCCACTA
GTCCGATTTACTGATCGGCAGGATGATTTGAATGATTTAGGGGATGGTGGAGGAGCTCCAGTATACAGATGGATCTCCAT
GTTAGAATTTGGTGGGTTACTCGCATTTTTTTA-TGCAAAACTGGATTAAGTTCCGTAATCTTTATTTCCCCTTCCCACG
TGACATTACTTGCTTTTAAGAGATTCAGAAATTTTTATTCTGAAAGACGTACTAGGATTCGGATAGACAGATGAACTTTC
TTTTCATTTGTGTTTGGCATGACAGAAATGCATTCTTGGAATCAATTTTGTGTAGTTTGGGAAATAGCTCCAACTTAGTC
AGAAAATCAAGTGAATTTTATATAGTTAGTAAATAATTTGCAAGTTATTCAGTGTAGCACTGCCACATTAGATCAAGTTG
ACTGAATAAATATCTGGTTTCTTATATCCAAAGTGATTTGTCCGTAATTTCTTTCTAAAATAGCTACTCAAGATCAGATC
TTTCTGATCCAGCAAGATACGGCTAATATATTGATTTGTTGTTATTCGTGACTTGATCTCAGAAAACCTCGCCAAAGAGC
TTGTTGAGATGTTTGTTTCAGAGCTACGATTGAAGGTATGCCATCACACAATTCTGCTATGTTTTAGCTTGTGCACTTAG
AAATCGCATTTTTTTACATCCCTGTTTCTCCTGAACTTTTGGAAAAATCCTGACAGTGGAAATCATTTTTAATGTAGAGA
CTGATTGTCTTGGACCTCCTGTCAATTAACTTAAAAGAAGGTGCAGATCCTTCATTAGAATGGTCAGATGAGTTATATGA
CGGGGAATTCAACGAATTTCAGAGGATTGGCCTGGGGTCTGGAGACAGCTTCCCACTACCTGAGAATTGGAAGGCTGATG
TCTTACAGGCACGGCGACCTGGACATACCCCATCCCATGAGGTTTTACAGGTGTTGATCCAATTTTTGCAATAGCTTTGC
ATTTATTCCCTTAGAAATCAACTGTCTCTGTCCTGATGTTTAGATCTTT-AATTGTTTGTTTGGTAGACATAGCATTGTG
TTGGCTCATTGTAAATAAAGGATGAGAGCACCATCTTTGGATTAGATCAAATGTGTTGTGCTCATTGCAGCATGCTTTCT
AACAAGGGTTGTGTCTTTTCAATTATTATTTTA--CAGGTTTATTTAACCTCTTGGCTTGCTAATGTGAACATCAAGACG
AGTAGGTAATTGCTCCATCTGCTTTAGCTTT-GGATTTTACAAACTA---------------------------------
---------------------------------------------------------------------GTATAAGG---
------------AATTAAGCTGTATCATATACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAATTGAACTA
AAACCACGACGAGTAATTTGGAACGGAGGGAGTACTAGTTTTGTTGATAGTGTGATAGTATTGATCTCTTGATTTTATTT
TCAGAATTGACGAAATATTTGAGCTTGTTGAGGAAGAGATGCAGATCAAATTGCGTTGAAGATTTCGATTCATAGAATTT
AAGTGGGAACCATTCGGGAATG-------------TTCAGGGGTTCTTTTTCATTAACGGAAGTGATTTAGGCTATTTAG
CCAGTGTGGTCTGCCCTAAGAAAGAGGGCTCATATATAATACTTCTCAAATGCATTACTGTTAGCTTGAATACAGTTTGT
GTAACAAGGCTGAGCCACGAGCCCACCGGCTCCTGAAAATCCAGAATGTCTTGTCTTGCCCCTGTGGTTGGCGTTCCATG
GAGTACGTAGTAGCTGAAAACAGCCTGACACTGGACTCTGCTTCTAGTGCTGATTTCAGGATCTGCTGGGAAGACGTGGG
AGAGAAATCAAGCACAGTGTGGGCGAGTATCCGAGTTTCTCCATGTTCTCGTGGAAGTTATATATGACAGGGAATCTCCC
TGGCCTTGTTTTGTGTGGTGCCGCCTCGCCCGTTTCCAGCAGCACTCTTCTTCTCCGGCCACAAATAATTCGAAGCTAAA
GAAAATGCCATTGCCATGGAGGAGCAATTCACTAGTGCTCGCCCAAGGTTCGATGCTAGTAGTAGA--------------
--------------------------------------------------------------------------------
-------------------------------------------------------CAGGAGGAGCCCAGCTTATTATTGG
CAGTAGCAT-----ATATCATGATTGGCTGCAAGGAAGAGAGCAGAGGAGTCAGGAGGAGGACCCCAGAGCTCTGTTGAA
CGTGCCCATGCATGCTGCCCC------------------GGACAAACGAAACGATCCAGGAGCTTTGTCTGCCGCATGCC
CTTGCCCTTGCCCTTGCCCTGTTCCATTCCACTC-----CATTTAAAGAGGGAGATG---GAAAAAGAAACTGAACGTCC
ACATGAGATATCACGTCCCTGTTCCCGGGCGGGACACTGGTCAACCATGTGGCT-----CCTGCATTGCCTCTCTGAATT
AAAA----------------------------------------------------------------------------
------------------------------------------------------------
>chr4D_138
--------------------------------------------------------------------------------
---------------------------------------------------------GAGGGAGTATGTCTGTAAGACCA
TATTGAGCTATTTCTATTTGCTATTGGTAAAGTAATTAGAACGTTGGCATGTCATATTTGTTGTCAAAAGAAAAGGATGG
ACCACCCTGCTCGTTAGGGCCCCTTTATTCAAAGTTGTTTGTGTGACAATGTACGAGACTTGACTC-TGTGATTAAATTA
GTAGGATGGAAAATTTTGATTATTGGCTAGCAGACAGGTTTGATTTTGACCTGCAGAAACTGAGATGCAGAGTTAAATAC
CATTCATTGAGATTTACTGACCCCATACAAGAAATGAGTGGAAAGATAATACAAAGAATGAGAATTAGAAGAAGATAATA
CAGTGATGGTCCTTCTTCTGAATTGTCCTTGTTGAGAGAGACTTGAGACAGTTTGATGGACCAAATGCATATATGAATGT
TGTATCGTTTATGTTGGACCTTGCTGGACTTTCTTCTTTCGAATTTGTGAATTGTTGATCAGTGCATGCCTATATTATCT
TGTAGTATATGGTAATGTATTGCTAGTTCTTTAGCAAAGGTCATGTCATATTTTTCTTGCACCGAGCCTTGATCGGCTTG
CGAGCTTCACAAGCTTGGCCGGAGGCTTGGGCCTGGCTTGTTGTATCTTCGAGCCCTGAGCTTTCTGTCCAGCCCTAGTT
GTGTTGTGATATTTGGAAATTTCAAACATGTTTAGTTAACTCTAATGTTGTGAGACTTGATTAAGCTATTCATATTGCTC
TTCTGGTCAATTTCTTATTACTGTGTGATGTCGATTT-TTTT-GTAGGTGGCCCACTGGATTATTTGTTTCTAGCTCAGC
CACTGCCTCAGAATAGTTTAGGACCTGAGAAGTCCTTTACTCCATTAGGCAAAACAATGGAGTACTGTGCAGCCACCCCT
GTTCGCCGCCCTGCCGACCCCTCTTCCCCATCCCCAACC------C------CATCTCCCTTATCTCTGCGCCAGTGGCG
CCCAGCGGCGCAGCGCAACCTGCGCAACCAGTGGTCGCGCCTGCTTGCCGCCAAGACCCAGTGGCTGGACGCCGCCGCCA
GCGGCCGCTCCCATGCTGCCACACTCGTCAACGCCTACCTCTCCCGCAGGTTGTCCCCTCTCTGGCTCTGTGTTTCGGCG
ACGCTTGAGTTTTTGAGATTTTATTAACTAGTTACTGACCGCGCCTTGGGCTTGTCATTTTGCCAGTTACATGCCAGGGA
TGGATTTGGGGGTGCTCAAGGACATGCCCAGGATCCGCGACAGGGCGAGCGCCAAATTGGCCCACAAGGAGGTAGCTATG
CTGTCGCCAGGAACTCAGCCAATCCTCCTCAGCAAC--ATGGTTTAATTTTCTTGTTCATCCCCTCATTTTCATGTCCCT
TGCTTGGTTCAGGTGCAATGCCGCGAGATGCTTCTATCAGCCTACAAGGAGATGGTAATGCTTCATACAAAGCCCATGCT
TGTTCATGTCATTTTAGTCGGGACCCTGTAAGCCATTAATGGTTGTTTGACTTTTGGTGCTCTTCCTATTTCCTGGTAAT
AGGTCTGTGCCATGTCCGACTTGGTTAAAGCTTCTCTTGCCATGCGGTGTTTCTCCAAAGTATCTTCTGGTAGCCCACTA
GTCCGATTTACTGACCGCCAGGATGATTTGAATGATTTAGGGGATGGTGGAGGAGCTCCAGTACACAGATGGGTCTCCAT
GTTAGAATTTGGTGGGTTACTCGCATTTTTTTAATGCAAAACTGGATTAAGTTCCGCAATCTTTATTTCCCCTTCCTACT
TGACATTACTTGCTTTTAAGAGATTCAGAAATTTTTGTTCTGAAATACGTACTAGGATTCGGATAGACAGATGAACTTTC
TTTTCATTTGTGTTTGGCATGACAGAAATGCATTCCTCGAATCAATTTTGTATAGTTTGGGAAATAGCTCCAACTTAGTC
AGAAAGTCAAGTGAATTTTATGTAGTTAGTAAATAATTTGCAAGTTATTCAGTGTAGCACTGCCACATTAGATCAAGTTG
ACTGAATAAATACCTAGTTTCTTATATCCAAAGTGATCTGTCCATAATTTCTTTCTAAAATAGCTACTCAAGATCAGATC
TTCCTGATCCAGCAAGATACGGCTAATATATTGATTTGTTCTTATTCGTGAATTGATCTCAGAAAACCTCGCCAAAGAGC
TTGTTGAGATGTTTGTTTCAGAGCTACAATTGAAGGTATGTCGTCACACAATTCTGCCATGTTTTAGTTTGTGCACTTAG
AAATCGCC--TTTTTACATCCCTGTTTCTCCTGAACTTTGTGAAAATTCCTGACAGTGGAAATCATTTTGAATGTAGAGG
TTGATTGTCTTGGACCTCCTGTCAATTAACTTAAAAGAAGGTGTAGATCCTTCATTAGAATGGTCAGATGAGTTATATGA
CGGGGAATTCAACGAATTTCAGAGTATTGGCCTGGGGTCTGGAGACAGCTTCCCACTACCTGAGAATTGGAAGGCTGATG
TCTTACAGGCACGGCGACCTGGACATACTCCATCCCATGAGGTTTTACAGGTGTTGATCCAATTTTTGCAATAGTGTTGC
ATTTATTCCCTTAGAAATCAACTGTCTCTGTCCTGATGTTTAGATCTTT-AATTGTTTGTTTGGTAGACATAGCATTACG
TTGGCTCA-TGTAAATAAGGGATGAGAGCGCCATCTTTGGATTACATCAAATGTGTTATGCTCATTGCAGCATGCTTTCT
AACAAGGGTTCTGTCTTTTCAATTATTATTTTATACAGGTTTATTTAACCTCCTGGCTTGCTAACGTGAACATCAAGACG
AATAGGTAATTACTTCATCTGCTTTAGCTTTGGGATTTTACAAACTATAAGGATACCTGAATGTTCACCT----------
--------------------------------------------------------------------------------
--TGAATTTCGAAATTAAGCTGTGTATCGTATT-----------------------------------------------
-------------------------------------GTTTTGGTGAAACTGTGATAGTATTGATCTCTTGAGTTTATTT
TCAGAATTGACGAAATATTTGAGCTTGTTGGGGAAGAGATGCAAATCAAATTGCGTTGAAGATTTTGATGCATAGAGTTC
GAGCAAGAACTATTCGGGAATGACCCATCTTCCCTTTCAGGGGTTCTTTTTCCTTAGCAGCC------TAGGCCAATTAG
CTTGTGTGATCTGCCCCAAGAAAGAGGGCTCGTCTAATCT--TTCTCAAATCTATTACTGATATTCTTGAGTTGTCTGCT
GGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGTATTAAAGATTTTCTAAGTTTTCGTCCAAAAAAAAGGATCTTCTAAGTTGGTC
AAGCAAAGAAAGGTTGACACCACAAGAAAACCATCTTATTTGCACATGGGTCTGAGGACATTTGATTAGCCCAGCCATGT
GTAATCATTAAGCCTGTCGTCTCTGGCCATCATTTCTCGGAACGTTGGTCTAGATGCTGTACAGTATTCGATCTTGGCTT
ATTCCATCTTACACTTAAATCTGCTGGTTTTAGAACATGGACGAAATCTGTTGTTTATAAGATGTACAGTATGTATGGTG
CTGTCTGTCAGGATGAAGGTTTGCTGCCTTTTGGTGCATGGATGGTACAACGCAGCAGGAGGAGCCCAACTTATTAGCAA
CTTGTATCATTAACATAGCATGATTGGTTGGAAGGAGGACCCCAA------------------CCCAAAGCTCTTTTAAA
ACTTGGGCAACGTAGTACTACGTGCCGTTGCCGTGCCATGGACAAACGAGACAATCCAGGTGCTTTGTCTGCTGCATGCC
G------------TTGCCCTGTTCCATTCCACTCTACTCCATTTAAAGATGGAGATAGTAGAAAAAGAAGCTGAATGTCC
ACATGA----TCACGTCCCTGTTCCCGGGCGGGACACTGGTCAACCATGTGGCTCCTGACCTGCAGTGTCTCTCTGAATT
AAAA----------------------------------------------------------------------------
------------------------------------------------------------
>chr4B_143
--------------------------------------------------------------------------------
--------------------------------------------------------------AGTATGTCTGTAAGACCA
TATTGATCTATTTCTATGTGCTATTGGTAAATTAATTAGAACGTTGGCATGTCATATTTGTTGTCAAAAGG-AAAGATGG
ACCACCCTGCTCGTTAGGGCCCCTTTATTCAAAGTTGTTTGTGTGACAATGTATGAGACTTGACTC-TGTGATTAAATTA
GTAGGATAGAAAATTTTGATTATTGGCTAGCAGACAGGTTTGATTTTGACCTGCAAAAACTGAGATGCAGAGTTAAATAC
CATCCATCGAGATTTACTGTCCCAATACAAGAAATGGGTGGAAAGATAATACGAAGAATGAGAATTAGGAGAAGATAATA
CAGTGATGGTCCTTCTTCTGAATTGTCCTTGTTGAGAGAGACTTGAGACAGTTTGATGGACCAAATGCATATATGAATGT
TGTATCGTTGATGTTGGACCTTTCTGGACTTTCTTCTTTTGAATTTGTGAATTGTTGGTCAGTGCATGCCTATATTATCT
TGTAGTATATGGTAATGTATTGCTAGTTCTTTAGCAAAGGTCATGCCATATTTTTCTTGCACCGAGCCTTGACCGGCTTG
CGAGCTTCAAGAGCTTGGCCGGAGGCTTGGGCCTGGCTTGTTGGATCTTCGAGCCCTGAGCTTTCTGTCCAGCCTTAGTT
GTGTTGTAATATTTGGAAATTTCAAACATATTTAGTTAAGTCTAATGTTGTGAGACTTGATTAAGCTATTCATATTGCTC
TTCTGGTCAATTTCTTATTACTGTGTGATGTCAGATTCT-TTTGTAGGTGGCCCACTCTATTATTTGTTTCTAGCTCAGC
CACTGCCTCAGAATAGCTTAGGACCTGAGAAGTCCTTTACTCCATAAGGCAAAACAATGGAGGACTGTGCAGCCACCCCT
GTTCGCCGCCCTGCCGACCCCTCCTCCCCATCCCTAACC------C------CGTCTCCCTTGTCTCTGCGCCAGTGGCG
CCCAGCGGCGCAGCGCAATCTGCGCAACCAGTGGTCGCGCCTGCTTGCCGCCAAGACCCGGTGGCTGGACGCCGCCGCCA
GCGGCCGCTCCCATGCCGCCACACTCGTCAACGCCTACCTCTCCCGCAGGTTGTCCCCTCTCTTGCTCTGTGTTTCGGCG
ACACTTGAGTTTTTGAGATTTTAGTAACTAGTAACTGACCGCGCCTTGGGCTTGTCATTTTGTCAGTTACATGCCAGGGA
TGGATTTGGGGGTGCTCAAGGACATGCCCAGGATCCGCGACAGGGCGAGCGCCAAATTGGCCCACAAGGAGGTAGCTACG
CTGTCGCCAGGAACTCGGCCAATCCTCCTCAGCAGTATATGGTTTAATTTTCTTGTTCATCTCCTCATTTTCATGTCCCT
TGCTTGGTTCAGGTGCAATGCCGCGAGATGCTTCTATCAGCCTACAAGGAGATGGTAATGCTTCATACAAAGCCCATGCT
TGTTCATGTCATTTTAGTTGGGACCCTGTAAGCCATTAATGATTGTTTGACTTTTGGTGCTCTTCCTATTTCCTGGTAAT
AGGTCTGTGCCATGTCCGACTTGGTTAAAGCTTCTCATGCCATGCGGATCA--TCCAAAGTATCTGCTGGTAGCCCACTA
GTCCGATTTACTGATCGCCAGGATGATTTGAATGATTTAGGGGATGGTGGAGGAGCTCCAGTATACAGATGGGTCTCCAT
GTTAGAATTTGGTGGGTTACTCGCATTTTTTTA-TGC-AAACTGGATTAAGTTCCATAATCTTTATTTCCCCTTCCCATG
TGACTTTACTTGGTTTTAAGAGATTCAGAAATTTTTGTTCTGAAATACGTACTAGGATTCGGATAGACAGATGAACTTTC
TTTTCATTTGTGTTTGGCATGACAGAAATGCATGCTTCGAATCGATTTTGTGTAGTTTGGGAAATAGCTCCAACTTAGTC
AGAAAGTCAAGTGACTTTTATATAGTTAGTAAATAATTTGCAAGTTATTCAGTGTAGCACTGCCACATTAGATCAACTTT
ACTGAATAAATATCTAGTTTCTTATATTCAAAGTGATTTGTCCATAATTTCTTTCTAAAATAGCTACTCAAGATCAGATC
TTCCTGATCCAGCAAGATACGGCTAACATATTGATTTGTT-TTATTCGTGAATTGATCTCAGAAAACCTCGCCAAAGAGC
TTGTTGAGATGTTTGTTTCAGAGCTACAATTGAAGGTATGTCATCACACAATTCTGCTATGTTTTAGCTTGTGCACTTAG
AAATCGCTTTTTTTTACATACCCGTTTCTCCTGAACTTTTGGAAAATTCCTGACAGTGGAAATCACTTTGAATGTAGAGA
CTGATTGTCTTGGACTTCCTGTCAATTAACTTAAAAGAAGGTGCAGGTCCTTCATTAGAATGGTCAGATGAGCTATATGA
CGGGGAATTGTACGAATTTCAGAGTATTGCCTTGGGGTCTGGAGACAGCTTCCCACTACCTGAGAATTGGAAGGCTGATG
TCTTTCAGGGACGGCGACCTGGACATGCTCCATCCCATGAGGTTTTACAGGTGTTGATCCAATTTTTGCAATAGTGTTGC
ATGTATTCCCTTAGAAATCAACTGTCTCTGTCCTGATGTTTAGATCTTT-AATTGTTTGTTTGGTAGACTCG--------
--------TTGTAAATAAAGGATGAGAGCGGCATCTTTGGTTTAGATCAAATGTGTTATGCTCATTGCAGCATGCTTTCT
AACGAGGGTTCTGTCTTTTCAATTATTATTTTA--CAGGTTTATTTAACCTGTTGGCTTGCTAATGTGAACATCAAGACG
AGTAGGTAATTGCTCCATCTGCTTTAGCTTT-GGATTTTACAAACTATTCCCTCCGTTCCGAATTACTTGTCGTAGGTAT
GGATGTATCTAAATGTATTTTAGTTCTTGATACATCCGTTTCTCCGACAAGTAATTTGAAACGGAGGGAGTATAAGGATA
CCTGAATTTCGAAATTAAGCTGTATCATATGGC-----------------------------------------------
---------------------------------------TTTGGTGATAATGTGATAGTATTGATCTCTTGATTTTATTT
TCAGAGTTGACGAAATATTTGAGCTTGTTGGGGAAGAGATGCAGATCAAACTGCGTTGAAGATTTTGATGCATAGAATTT
AAGTGGGAACCATTCGGGAATG-------------TTCAGGTTATTTTTTTCCTTAACGGAAGTGATTTAGGCTAATTAG
CCTGTGTGATATGCCCTGAGAAAGAGGGCTCATCTAATCT--TTCTCAAATGCATTACTGTTAGCTTGAATACAGTT---
--------------------------------------------------------------------------------
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------------------------------------------------------------
>SNPs
------------S--------------------------S----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------SSSSSS----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
------------S-------------------------------------------------------------------
-------------------------------------------------S------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
----------------------------------S------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S----S-----------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_40
-------------GCAATTGAGAATTTTAGTACTCCCTCT----------------------------------------
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------------------------------------------------------------
>reverse_1091
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CCCATCTCCCTTATCTCTGCG---------
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------------------------------------------------------------
>forward_1087
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTCCCCATCCCCAACCCC---------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>reverse_2653
--------------------------------------------------------------------------------
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------------AGCGACCTGGACATACCCC-------------------------------------------------
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------------------------------------------------------------
>forward_1382
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GATTTGGGGGTGCTCAAGGG----------------------------------------------------------
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------------------------------------------------------------
>reverse_3210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------TGAGTAATTTGGAACGGAGGGA-------------------------------------------------
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------------------------------------------------------------
>forward_2653
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GCTGATG
TCTTACAGGCACA-------------------------------------------------------------------
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------------------------------------------------------------
>reverse_3803
--------------------------------------------------------------------------------
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------------------------------------------GACTCTTCTTCTCCGGCCAC------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
