>input_sequence_36128
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-------------------------------------------AAGGCACCGCACCGCACCCGCCCGTTGCTTTTGCATG
CTGCGTGTCCGCGCCGAGGACACTTGTCTTCTCCCCATAAACACACCAGCAAGCACGCCCGAGAAACCACATGGAAAGCA
CGGAGCG------------GCAGCGAGTCTAGACTAGAGCGAGAAGCAGAGTGCCCCGGAAGCCTCCCCCACCCCATTCC
CCCCCTTTCTTCTCCCC-----------GGCCCTTGTTAGTCCCGTCGCGCGAGGAGGGGCGCCGCC----------GCA
TCCCCGCCCGGCCGCCGAATCGACCGCGAGGTACGCACCCACCGTCCCACCCACTGCTACTACTCTCCCTGAGTGGAAAA
GATGCCGCCGCGCTTTCTAGATTTGTGTATGTTTGGCCCGGAAGTTTTTGCGGTTCTTGGTTAGTTTCCCAGTCCTGGCC
TCAGATTGGACGGCTTTCGTTTACTGGTTGCTTGATTCCGCCGCGATTCGTGTCAGATGGTTTCTGGTCGGTGGTAATGC
CGCCTTCGACCTTCCCTTTCGTGGCCGTCGCAGTGCCAGGTTATGGAGCTCGGAGTTTTATTGCTGCATTCCTGTAAATC
CTTGTTGAAGCAGCCGTTGGGATTTGGGAGTAATAAGATTGGGGAGAGAAGAGCTTCTGCTGTTTATCCGTTTGGCTTGG
TGTTCTTG-TTTTCTTACCTTCACCATGTTCTTCAAGTGAGTGTAGTTTGCGGGGTTTTTTTTTTCTGATTTGCAAGGAT
GAGATGTTTGTGCTTGGAGCCGGCAGGCAATTTGTTAGTTTTCATTAAAAAAAATCATGTACCCGGTTAATCAATCATCG
TTCTTTT-----GTTCTCTTTGGTTGATTGATCCTTTGACCCATATGAGTAAAAGCAAAAGCTGAAATTTATCTGAACTT
TTCTTTGCTCTCGTCACTCACTGCTGACTGATCTGATACTAAAAAACAAACCGCTTGACTGTTTCAGAGGCAACTTGCTA
GTGCCTGTGCTCCTCAAGAGCAAGCCATGGACAACTGCGCCGATCAGAGCCTTGCGCAGAGGAGCATTGGATTCTTCAGG
GTGCCTGGTCTCTTTGTGCGGCTGAGCAGCAAAGGCCTGAACGCAGTGGACCCTGATTCAGTCTGGAGCCCAACCTCTCC
TCTGGATTTCAAGAACCTGCCGTCGTCAAACACTCTGGGCACCAATCTCAAGCCCACTGGATTGCTAGGCATCGAGGCTG
ATCTTCTGAAGCTCAGAACCGGCTCCCCGAGAGTCGGTCTCGGCCTTGTCGATGCCCTCACCGCCGACGAGGGCTCGTTG
CACTTTGGCGGCAAGAACTCGTTCCTTGAATCCATCAAGCCATTTCTCGAGCTTGGGCTGCCAAAGGTGGCTGCCGATGA
TGCATCGTCGTGTCAGAAGACCGGTTCGGTTGGCCTTGGCGCCGCCATGAAGGAGAACACAGGCTTCGTTCAATGTGATT
GTGAAGATGAAGAGTACACCTGCGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATCCTGAAAGGCCAGACGGTG
GAGGTGCCCAACGGCGTGCGTTCCAAGAGGCCGATTTTCACCATCGAGCCCATCGAGGAGCCGTCATGGCCGTCGATGCC
GGCTGCTGGTGCCGCCGCTTCTGGTTCGTGCTCCCACTGCAGGAAGCGGCTGCGAGAGGACATGGATACCTTCATGTATC
TGTGAGCACTGAAACCATTTTTTGCTTCCATCTGATGTGATATGGTGTGTTGTTCAGTTGTTGAGTTTTGTGTTGGGTTT
GGAATGCAGGGGCGA---GTTGTTCTGCAGCAACGAGTGCAGGAAGTGCTGCATGGAGGAGGAGATAGACGAGGTGGAGG
TGGAGCTCATGGTGCTGGATTCCGGCGGCTCCTCTGCTGATCTGCATTGGTGAAGATTGCTTGATGTTGCTAGTGGTGGT
GGCGAGGAGGCGTTGCCCACAAAGCGTCTGTTCTTTCTTTATTTTGGTTTGGAACTTGGTAGGACTCAGCAGCAGGGGAA
GGGAGGGAGAAAAACGCTTCTCATTCTGGTTTTT-GTATGAAT---GGAGAGGTTTTG----ATTTAGCCAGTGTCTGCC
ATAGCGCAATGGCTGGACCATTTTCATGGGTATTGGGAGTATTCCTTTTTGGCTGCAAGACTGGTAGAAATACTCAGATA
TCGATGTGCCATAA-TATATTATAATCAATCAATTATATTACCCTCTTATATATT--------TTTTAAAAA--------
------------------TC------------------------------------------------------------
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>chr3A_1_TraesCS3A01G289000
TGCACAACCCCCAAGTGCTAGAAGCACTAGTTGTTCGGGAGGCATTAGCACTTTTAGAAGATCTCTATATCAACCATTTA
CTTGTTGCCTCCGATTGCAAGGTGGTGGTAGATGCAATCAGACAGGGAAGCTTAGCAGAATTTGGAGCCATTGTCGAGGA
AATCAAGACTAGAGCAACTACCTTTATTTCATGTTCGTTTACTCATGAATATAGGACCTCCAATACGGAGGCCCATAATC
TCGCAAAGCATGCGTTATCTTTAGGGTTTGGCCGACACACTTGGCTAGGACAACCCGGCGATCTTCTTTTTGTACCTATG
AACATTATGATTCAGTAATAAAGCTTTGTGAGATTCTCAAAAAAAAATACTATAAATCTTTGTAGAGATTCTACTATAAA
CTACATACGGAATAAAATGAATGAATCTACATTCTAAATGCATCTATATACATCAGTATGTGGTTCATAGTGAAATCTCT
ACAAAGATTTATATTTAGAAACGGAGAGAGTATAAACGAAGATGCTACAAAAAGTGACATTTTTACAAGAGTACATATAG
TGATACATTATTTTTTTGCAAATACAGTGATACACCCAATTAAAATCAACAAGAGATAATTCAAATAAAAACACTTTATT
TTATTTTATTATTTCTTATTAAAGCAGGACCTAGAAGGTCCGGAAGCACTGGATAAAGTCATCTGAGAACATAACCGAAA
GCATCTCCAATGTCATCGAAGTTAACCGATGAAGTAAACTGTCGACGTAGAATAAAAT------AAAGCCAGCACCATTA
CGTCGCTAAACTTAGGCGTACCC-GAGTTAATGTTCTCCAAAAAGTAGAAATAGTCACATGGAGCAGCACTGGAGTGCCT
TCCAGGAAACACAAAAGAAAAAGG-------AAGA------------AAAAAACAAAAGGAGAAGAGAGAACAAAAATAG
TAGGTACCACTG--------------------------------------------------------------------
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---------------------------------------------------------------------CACTACACTAG
GAGAGAGGGAGAGAGGGAGAGAGAGAGGCGAGGAGCCCCGGAGAAGGCACCGCACCGCACCCGCCCGTTGCTTTTGCATG
CTGCGTGTCCGCGCCGAGGACACTTGTCTTCTCCCCATAAACACACCAGCAAGCACGCCCGAGAAACCACATGGAAAGCA
CGGAGCG------------GCAGCGAGTCTAGACTAGAGCGAGAAGCAGAGTGCCCCGGAAGCCTCCCCCACCCCATTCC
CCCCCTTTCTTCTCCCC-----------GGCCCTTGTTAGTCCCGTCGCGCGAGGAGGGGCGCCGCC----------GCA
TCCCCGCCCGGCCGCCGAATCGACCGCGAGGTACGCACCCACCGTCCCACCCACTGCTACTACTCTCCCTGAGTGGAAAA
GATGCCGCCGCGCTTTCTAGATTTGTGTATGTTTGGCCCGGAAGTTTTTGCGGTTCTTGGTTAGTTTCCCAGTCCTGGCC
TCAGATTGGACGGCTTTCGTTTACTGGTTGCTTGATTCCGCCGCGATTCGTGTCAGATGGTTTCTGGTCGGTGGTAATGC
CGCCTTCGACCTTCCCTTTCGTGGCCGTCGCAGTGCCAGGTTATGGAGCTCGGAGTTTTATTGCTGCATTCCTGTAAATC
CTTGTTGAAGCAGCCGTTGGGATTTGGGAGTAATAAGATTGGGGAGAGAAGAGCTTCTGCTGTTTATCCGTTTGGCTTGG
TGTTCTTG-TTTTCTTACCTTCACCATGTTCTTCAAGTGAGTGTAGTTTGCGGGGTTTTTTTTTTCTGATTTGCAAGGAT
GAGATGTTTGTGCTTGGAGCCGGCAGGCAATTTGTTAGTTTTCATTAAAAAAAATCATGTACCCGGTTAATCAATCATCG
TTCTTTT-----GTTCTCTTTGGTTGATTGATCCTTTGACCCATATGAGTAAAAGCAAAAGCTGAAATTTATCTGAACTT
TTCTTTGCTCTCGTCACTCACTGCTGACTGATCTGATACTAAAAAACAAACCGCTTGACTGTTTCAGAGGCAACTTGCTA
GTGCCTGTGCTCCTCAAGAGCAAGCCATGGACAACTGCGCCGATCAGAGCCTTGCGCAGAGGAGCATTGGATTCTTCAGG
GTGCCTGGTCTCTTTGTGCGGCTGAGCAGCAAAGGCCTGAACGCAGTGGACCCTGATTCAGTCTGGAGCCCAACCTCTCC
TCTGGATTTCAAGAACCTGCCGTCGTCAAACACTCTGGGCACCAATCTCAAGCCCACTGGATTGCTAGGCATCGAGGCTG
ATCTTCTGAAGCTCAGAACCGGCTCCCCGAGAGTCGGTCTCGGCCTTGTCGATGCCCTCACCGCCGACGAGGGCTCGTTG
CACTTTGGCGGCAAGAACTCGTTCCTTGAATCCATCAAGCCATTTCTCGAGCTTGGGCTGCCAAAGGTGGCTGCCGATGA
TGCATCGTCGTGTCAGAAGACCGGTTCGGTTGGCCTTGGCGCCGCCATGAAGGAGAACACAGGCTTCGTTCAATGTGATT
GTGAAGATGAAGAGTACACCTGCGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATCCTGAAAGGCCAGACGGTG
GAGGTGCCCAACGGCGTGCGTTCCAAGAGGCCGATTTTCACCATCGAGCCCATCGAGGAGCCGTCATGGCCGTCGATGCC
GGCTGCTGGTGCCGCCGCTTCTGGTTCGTGCTCCCACTGCAGGAAGCGGCTGCGAGAGGACATGGATACCTTCATGTATC
TGTGAGCACTGAAACCATTTTTTGCTTCCATCTGATGTGATATGGTGTGTTGTTCAGTTGTTGAGTTTTGTGTTGGGTTT
GGAATGCAGGGGCGA---GTTGTTCTGCAGCAACGAGTGCAGGAAGTGCTGCATGGAGGAGGAGATAGACGAGGTGGAGG
TGGAGCTCATGGTGCTGGATTCCGGCGGCTCCTCTGCTGATCTGCATTGGTGAAGATTGCTTGATGTTGCTAGTGGTGGT
GGCGAGGAGGCGTTGCCCACAAAGCGTCTGTTCTTTCTTTATTTTGGTTTGGAACTTGGTAGGACTCAGCAGCAGGGGAA
GGGAGGGAGAAAAACGCTTCTCATTCTGGTTTTT-GTATGAAT---GGAGAGGTTTTG----ATTTAGCCAGTGTCTGCC
ATAGCGCAATGGCTGGACCATTTTCATGGGTATTGGGAGTATTCCTTTTTGGCTGCAAGACTGGTAGAAATACTCAGATA
TCGATGTGCCATAA-TATATTATAATCAATCAATTATATTACCCTCTTATATATT--------TTTTAAAAA--------
------------------TCCTGCAAGTTGTGGCCATCCGAGTTTGTTCCTGCAAGTTGTGCA-----------------
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-------------------------------------------------------------------------------T
CATAGAGAGCCATTGTTGCTCTCTGCTGCT------------CTCCTGAGGAAAAGGTAAAAGTGAAAACTACAG-TAC-
AGTATGATGCTCTGCTCTGGTGGGTAGTCAGAGGCACTAACTACAGTCGCAGTGCAATTATCACCAGCTTTGCCATTCAT
TGTGCTGTAGCCGTCGCAGCAGCAGGAGGGCCCTGTGTAAGCGAAGCTACAGTACCATGTTGCATCGACATAAGGACGGG
CGCAGGTAGGCAAGCCTACAGTACGA---------GTGCTACAGGCAAAACGCCAAGGGTATCCAATGCGCCCGGAGAAA
GGAGAATGGAGGACTCTTGACTTCAGCGTCAGCGTCATTCATCGCTTGCGACTTGAGCATATCAGCATCTGCAGGTGATA
CGGGAGCTTAGATGCTCCCGTGATACGAACTCCCTCGAACCGTTCGATCAGACAACCAACGGCCACAAACAGAGCTCCTG
CAACTTTGCAGAAAAATGCTTCCAGAATCTGATATTTACGTGCAAGTCCAAAAGGATGGCTGTCACCCTTACATCTCTCA
TCCAATGGCTCACGAAAACCCGTATCATGGTAGCACCTAAAACTCTTGTATCACCTGATATTTTGTCATCAGGATCTTGA
ACAAGGATCACCAACTTCTTTTCCCAAGGGTCGTTTCAGTTTTCCTCCGGGTAGAGTTGGCTTTGCAAGTTTTGCCTATA
CCGATAGCAGTTGTCTCTCCCGGTAGGCGCATGAATGCTAACTCCATTGTTCCGGATGTTACTATCACTTTGGGTGACTA
CAAGCTTCTGTCTTCTCCTACGGTTCTTGGTGACTCGGATATTGATCTTATTCTCAAAATGGATTGCCTTTCTAAGCACA
AGGCTCAGCTTGATTGTGCAGCCAGGCAGATTCAATTGACTCATTCGTCTGAGCATGTAATTGTCTTTGCCGCTCGTGAT
GATACCATCCGTCTGTTTT
>chr3D_525
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--------------------------------------------CTACAACAAGTGACATTTTTACGGGAGTACACATAG
TGATACT---TTTTTTTGCGAATACAGTGATACACCCAATTAGAACA---AAGAGATCATTCAAATGAAAACACTTTATT
TTACTTTATT-TTTCTTATTAAAGCAGGACCTAGAAGGTCCCGAAGCACTGGATAAAGTCATCCCAGAACATAACTGAAA
GCATCTCCAGTGATATCGAAGTTAACCAATGAAGTAAACTGTTGACATAAATTAAAATAAACTAAAACCCAGCACCATTA
CGTCGCTAAACTTAGGCGTGTCCGGAGTTAATGTTCTCCAAAAAGTAAAAATAGTCACATGGAGCAGCACTGGAGTGCCT
TCCAAGAAACACAAAAGAAAAAGGAAGAGAGAAGA------------AAAAATAAAAAGGAGAAGAGAAAACAAAAATAG
TACTAGGTATCACTGTAGTAGTACTCTCTTCGGTCCTTTTTACTCTGCATATTAGGTTTGTCCGAAGTCAATCTCATCCA
ACTTTGACCAAGTTTATATAAAAAATTATAGACATTCACGTAACAACACCAATATCATTAGATTCATCCTGGAATATATT
TTCATATTATATTTATTAGATATTACAGATGCTAATAATTTCAAATATAAATTTGATCAAACTTAGCAAAGTTTGACTTA
CGGCAAATCTAATGTGCAGAGTAAAAAAGAGCGAAGGGATTACTACTACACTACATTAGGAGAGAGGTACACTACATTAG
GAGAGAGGGAGAGAG------------GCGAGGAGCCCCGGAGAAG-----GCACCGCACCCGCCCGTTGCTTTTGCATG
CTGCGTGTCCGCGCCGAGGACACTTGTCTTCTCCCCATAAACACACCAGCAAGC----------AACCACATGGAAAGCA
CGGAGGGGGAGGAGCAGCAGCAGCGAGTCTAGA-----GCGAGAAGCAGAGTGCCCTGGAAGCCTCCCCCACCCCATT-C
CCCCCTTTCTTCTCCCCA------------CCCTTCTTAGTCCCGTCGCGCGAGGAGGGGCGCCGCCGCCTGAGCGAGCA
TCCCCGCCCGGCCGCCGAATCGACCGCGAGGTACGCATG--------CACCCACTACTACTACTCTCCCTGAGTGGAAAA
GATGCCGCCTCCCTTTCTAGATTTGTGTATGCTTGGCCCAGAAGTTTTTGCGGTTCTTGGCTGGTTTCCCAGTCCGGGCC
TCAGATTGGACGGCTTTCGTGTACTGGTTGCTTGATTCCGCCGCGATTCGTGTCGCGTGATTTCTGGTCGGTGGTAATGC
CGCCTTCGACCTTCCCTTTCGTGGCCGTCGCAGTGCCAGGTTATGGAGCTCGGAGTTTTATTGCTGCATTCCTGTAAATC
CTTGTTGAAGCAGCCGTTGGGATTTGGGAGTAATAAGATTGGGGGGAGAAGAGCTTCTGCTGTTTATCCGTTTGGCTTGG
TGTTCTTCCTTTTCTCACCTTGACCATGTTC---AAGTGACTGTAGTTTTCGGTCTTGCTTTTTGA--ATTTGCAAGGAT
GAGATGTTTGTGCTTGGAACCGGCAGGCAGTTTGTTAGTTTTCATTAAAAAAA-TCATGTACCCGGTTAATCAATCATCG
TTCTTTT-----GTTCTCTCTGATTGATTGATCCTTTGGCCCATATGAGTAAAAGCAAAAGCTGAAATTTATCTGAACTT
TTCTTTGCTCTCGTCACTCACTGCTGACTGATCTGATACTAAAAAACAAACCGCTTGACTGTTTCAGAGACAACTTGCTA
GTGCCTGTGCTCCTCAAGAGCAAGCCATGGACAACTGCGCCGACCAGAGCCTTGGACAGAGGAGCATTGGATTCTTCAGG
GTGCCTGGTCTCTTTGTGAGGCTAAGCAGCAAAGGCCTGAATGCAGTGGACCCTGATTCAGTCTGGAGCCCAACCTCTCC
TCTGGATTTCAAGAACCTGCCGTCATCAAACACCGTGGGCACCAATCTCAAGCCCACTGGATTGCTAGGCATCGAGGCTG
ATCTTCTGAAGCTCAGAACCGGCTCCCCGAGAGTCGGTCTTGGCCTTGTCGATGCCCTCACCGCCGATGAGGGCTCGTTG
CACTTTGGAGGCAAGAACTCCTTTCTTGAATCCATCAAGCCATTTCTTGAGCTTGGGCTGCCAAAGGCGGCTGCC---GA
TGCATCCTCGTGTCAGAAGACCGGTTCGGCTGGCCTTGGCGCCGCCATGAAGGAGAACACAGGCTTTGTTCATTGTGACT
GTGAAGATGAAGAGTACACCTGCGTGATCGAGCACGGCCCGAACCCGAGGACGACGCACATCCTGAAAGGCCACACGGTG
GAGGTGCCCAACGGCGTCCGTTCCAAGAGGCCGATTTTCACCATCGAGCCCATCGAGGAGCAGTCATGGCCGTCGATGCC
GGCTGCTGGCGCCGC---TTCTGGTTCGTGCTCCCACTGCAGGAAGCGGCTGCGAGAGGACATGGACACCTTCATGTATC
TGTGAGCACTGAAACCAT-TTTTGCTTCCACCTGTTTTTATGTGGTGTGTTGTTCAGTTGTTGAGTTTTGTGTTGGA-TT
GGAATGCAGGGGCGA---GGCGTTCTGCAGCAACGAGTGCAGGAAGTGCTGCATCGAGGAGGAGATCGATGAGGTGGTGG
TGGAGCTCATGATGCTGGATTCCGGCGGCTCCTCTGCTGGTCTGCATTGGTGAAGATTGCTTGC--TTGCTAGTAGTGGT
GGCGAGGAGGCGTTGCCCACAAAGCGTCTGTTCTTTCTTTATTTTGGTTTGAAACTTGGTAGGACTCAGCAGCAG-GGAA
GGGAGGGAGAAAAACGCTTCTCATTCTGGTTTTT-GTATGAATGGAGGAGAGGTTTTG----AGTTATCCAGTGTCTGCC
ATAGCGCAATGGCTGGACCATTTTCATGGGTATTGGGAGTATTCCTTTTTGGC-GTAAGACTGGTAGAAATACTCAGATA
TCGATGTGCCATAAATATAT--TAATCAATCAATTATATTACCTTCTTATATATC--------TTTTAATCCTGCAAGTT
GTGGCCATCCGAATTTGTTCCTGCAAGTTGTGGCCATCCGAATTTGTTCCTGCAAGTTGTGCATCGGAGCAACTCCAATG
GGGCGACCCATTAAAGGGGACCAACGTTGCGTATCCAAACGGACGCGTGTTCGTTTTTTGTCCGCACCCGTTCCCGGCCC
ATTTTTTAGCCTGATTTGCGTCGGTGCGGACACGCGACGGACGCGCGCGCGGTCGCCTACTCTTGTCCCCGGGCCCGCTG
GTCTGTGGCACATTGGCCTCCCTCCTCCTGGCCAACAAGCAACCCTCGCCCCCCGTCGCCTCCGTCACCGACGCCGCCGC
CCATTTTTGCGGCAACTCTTCCAGCTGCCGCCGCCTCCACATCCGCCCAGCAACGCCGCCCCTGCCCCCAGTCGCCCGCG
GCCGCCGTTTTGCCGCCGGGGAGCAAACTGGTTCCCGCCGCCATTTCCCCCACCGCACAGCCGCCCGCGACCAAGAAGAC
GCCTCGCCGCCCCCGCCACATACGACCGGCACGCTCGTCGGACGCTGTCACACTCGTCGGATGCCGGCAGGGCAGCTAGC
TGGTCTGTGCGCGCCGCGTCTCCCCTCGTCGGCCGTCTCCTTCTTCGACGCCCGCAAGTTGTTCGACAGTTTGCCAAGGT
ACGAAAATGGACTCCGCCGACGAGTTCTTTTTCCACAATTTCATTTGCGACTCCGACGATTCGTCGTCCCACGACGAGGA
GGAGATATTGGCTGCCGTGTTGGTCCATCACCACCTCAACAACCAGCGGCTGTTGTTCCGTGGCTCCATTCCGGGCCACC
TTCCGGCGTTGAATCGTAACCGAGAGAGTGGGCATTTCCTTCTCTGGAAGGACTACTTTGATACAACAAACCCGTTGTTC
AAACATCACAAATTCCGCCGCCAGTTCCGTATGAGTAGGCATGTTTTCAACCGTATTAGAGAGGGAGTGGTCGGCTATGA
TGACTACTTCGAGTGCAAAGAGGATGCCGTCGGCAAGATTGGTTTCTCCTCTTATCAGAAATGCACTGCCGCCATCCGAA
TGCTTGCATACGGAGTGCCCGGTGATCTCATTGACGAGTACGTCCGTATGAGCGAGTCTACATGCCTAGAGTCCCTGTAT
AAGTTCTGCAAGGCTGTGATTGATGTGTTTGGCCCTGAGTACTTGAGAGAGCCGACAGCTGCAGATACAGCCCGTTTGTT
GGCGATGAATGCTAGCAGGGGCTTCCCGGGGATGCTTGGCAGCATAGACTGCATGCACTGGGAGTGGAAGAACTGCCCTT
CTGCTTGGCAAGGGCAGTATAAGAGACATGTCAGGGCTTGCACTGTCATACTAGAGGCCGTGGCGTCTCAAGATCTCTGG
ATCTGGCACTCTTTCTTTGGCATGGCTGGATCACACAATGATATCAACGTGCTTCAGCACTCGCTGGTGTTTGCTAGGCT
TGCCGAAGGCAACAGCCCACTGGTGAACTTTATTGTCAACGGCCACAACTACGACAAAGGGTACTATTTGGGTGACGGTA
TCTATCCTCAGTGGACCACTATTGTAAAGACAATACCCAATCCTGTTGGAGAGAAAAGAAAAAGATTTGCCCAAGAGCAA
GAAAGTGCTAGAAAGGATGTCGAGCGTGCCTTTGGTGTTTTGCAATCTCGATGGGGCATCGTTCGGTATCCTGCTAATAC
TTGGAGCACGCAGAAACTATGGGAGGTGATGACTGCTTGTGTGATCATGCAGAATATGATCGTAGAAGACGAGCGCCCGG
AACGTCTGTACGATCAAGGCTTTCAGTTTCAGGGTGAGAATGTTGTGCCTGAGCATGGAGTAGCGGCAACGTTTGAGCAG
TTCACTCAGTTTCATGAAGACATGCGTGATTGGGAAACTCACGTGCAACTGCAAAATGATTTGGTTGAGCATATGTGGAC
TCATGTTGGCAACCAGTAGGTGCGTCTTCTTTTATTCGTTTGCAAAACTATGTGAAACATTTTTATTTTTATTTGGCCTG
TAAACTATACTATTTATTTGGGCGGACTATTTTGTTTGTTAAATTTTCATTTCATAATATGTTGAATGCAATGCAAAATT
GGGCGGCCAGCCGGACACACCTGTACATATGGGTCGGCGCGTTGAGCGCGCTGCCGACCCATATGAAAAACAGGACGGAC
GCCGGGCGGGCGGCCGACTCAAACGGATAAAAAACGGACGAAATCGCTGTCCGTTTGAGTCGGCCTGTTGGAGTTGCTCT
CATAAAGAGCCATTGTTACTCTCTGCTGCT------------CTCCTGAGGAAAGGTTAAAAGTGAAAACTAGTACTAC-
AGTATGATGCTCTGCTCTGGTGGGTAGTCAGAGGCACTAACTACAGTCGCAGTGCAATTATCACCAGCTTTGCCATTCAT
TGTGCTGTAGCCCGCAGCTGCA---GAGGGCCCTGTGG------AGCTACAGTACCATGTTGCATCGACATAAGGACGGG
CGCAGGTAGGCAAGCCTAAGCGCTGGACAGTACGGGTGCTACAGGCAAAACGCCAAGGGTATCCAATGCGCCCGGA----
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>chr3B_783
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--------------------------------------------------------------------CCAGCACCATTA
CGTCGCTAAACTTAGGCGTATTC-GAGTTAATGTTCTCCAAAAAGTAAAATTAGTCACATGGAGCAGCACTGGAGTGCCT
TCCAAGAAACACAAAAGAAAAAAAAGGGAGAGAGCAGACGAGTAAAGAAAAAACAAAAGGAGAAGAGAAAACAAAAATAG
TACTACTGCTGTACACTAAAC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TACACTACACTAG
GAGAGAGAGAGAGAGAGAGAGAGAGAGACGA-------------------------------GCCCGTTGCTTTTGCATG
CTGCGTGTCCGCGCCGAGGACACTTGTCTTCTCCCCATAAACACACCAGCAAGCGCACCCGAGAAACCACATGGAAAGCA
CGGAGGGGGAGGGGCAGC---AGCGAGTCTAGA-----GCGAGAAGCAGAGTGCCCTGGAAGCCTCGCCCACCCCATT-C
CCCCCTTTCTTCTCCCCTAGGGCTCTCCGGCCCTTCTTAGTCCCGTCGCGCGAGGAGGGGCACCACCGCCT----GAGCA
TCCCCGCCCGGCCGTCGAATCGACCGCGAGGTACGCA----------CACCCACTGCTACTACTCTCCCTGAGTGGAAAA
GATGCGGCCGCACTTTCTAGATTTGTGTATGCTTGGCCCAGAAGTTTTTGCGGTTCTTGGCTGGTTTCCCAGTCCGGGCC
TCAGATTGGACGGCTTTCGTTTACTGGTTGCTTGATTCGGCCGCGATTCGTGTCGCGTGATTCCTGGTCGGTGGTAATGC
CGCCTTCGACCTTCCCTTTCATGGCCGTCGCAGTGCCAGGTTATGGAGCTCGGAA--------CTGCATCCCTGTAAATC
CTTGTTGAAGCAGCTGTTGGGATTTGGGAGTAATAAGATTGGGGGGAGAAGAGCTTCTGCTGTTTATCCGTTCGGCTTGG
TGTTCTTG-TTTTCTTACCTTGACCATGTTC---AAGTGACTGTAGTTTTCGGTCTTGCTTTTTGA--ATTTGCAAGGAT
GAGATGTTTGTGCTTGGAACCGGCAGGCAATTTGTTAGTTTTCATTAAAAAATA--ATGTACCCGGTTAATCAATCATCG
TTCTTTTCTTTTGTTCTCTTTGATTGATTGATCCTTTGACCCATATGAGTAAAAGCAAAAGCTGAAATCTATCTGAACTT
TTCTTTGCTCTCGTCACTCACTGCTGACTGATCTGATACTAAAAAACAAACCGTTTGACTGTTTCAGAGACAACTTGCTA
GTGCCTGTGCTCCTCAAGAGCAAGCCATGGACAACTGCGCCGACCAGAACCTTGCGCAGAGGAGCATTGGATTCTTCAGG
GTGCCTGGTCTCTTTGTGCGGCTGAGCAGCAAAGGCCTGAATGCAGTGGACCCTGATTCAGTCTGGAGCCCAACCTCTCC
TCTGGATTTCAAGAACCTGCCGTCATCAAACACCGTGGGCACCAATCTCAAGCCCACTGGACTGCTAGGCATCGAGGCTG
ATCTTCTGAAGCTCAGAACCGGCTCCCAGAGAGTCGGTCTCGGCCTTGTCGATGCCCTCACCGCCGACGAGGGCTCGTTG
CACTTTGGAGGCAAGAACTCCTTTCTTGAATCCATCAAGCCATTTCTTGAGCTTGGGCTGCCAAAGGCGGCTGCC---GA
TGCATCATCGTGTCAGAAGACCGGTTCGGTTGGCCATGGCGACGCCATGAACGAGAACACAGGCTTTGTTCAATGTGATT
GTGAGGATGAAGAGTACACCTGCGTGATCGAGCATGGCCCGAACCCGAGGACGACGCACATCCTGAAAGGCCAGACGGTG
GAGGTGCCCAACGGCGTCCGTTCCAAGAGGCCGATTTTCACCATTGAGCCCATCGAGGAGCAGTCATGGCCATCGATGCC
GGCTGGTGGTGCCA---CTTCTGGTTCGTGCTCCTACTGTAGGAAGCGGCTGCGAGAGGACATGGACACCTTCATGTATC
TGTGAGCACTGAAACGAT-TTTTGCTTCCATCTGTTTTTATGTGGTTG--TGTTCAGTTGTTGAGTTTTGTGTTGGA---
---ATGCAGGGGCGAGAAGGCGTTCTGCAGCAACGAGTGCAGGAAGTGCTGCATCGAGGAGGAGATGGATGAGGTGGAGG
TGGAGCTCATGATGCTGGATTCCGGCGGCTCCTCTGCTGATCTGCATTGGTGAAGATTGCTTGC--TTGCTAGTGGTGGT
GGCGAGGAAGCGTTGCCCAC-AAGCGTCTGTTCTTTCTTG-TTTTGGCCTGGAACTTAGTAGGACTCAGCAGCAG-GGAA
GGGAGGGAGAAAAACGCTTCTCATTCTGGTTTTTTGTATGAAT---GGAGGAGAGGTTTTGAATTTATCCAGTGTCTGCC
ATAGCGCAATGGCTGGACCATTTTCATGGGTATTGGGAGTATTCCTTTTTGGCTGTAAGACTGGTAGAAATACTCAAATA
TCGATGTGCCATAA-TATAT--TAATCAATCAATTATATTACCCTCTTATATACGAGTATATTTTTTAGTCCTGCGAGTT
GTGGCCACCCGAATTTGTTCTGCGCCGGGGCTGATTAATGA---------------TTGTTCA-----------------
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-------------------------------------------------------------------------------T
CATAGAGAGCCTTTGTTACTCTCTGCAGCTCATCGGCGAATGCTCCTGAGGAAAAGGTAAAAGTGAAAACTACAG-TAGT
AGTATGATGCTCTGCTCTGGTGGGCAGTCAGAAGCACTAACTACAGTCGCAGTGCAATTATCACCAGCTTTGCCATTCAT
TGTGCTGTAGCCCGCAGCTGCA---GAGGGCCCTGTGT------AGCTACAGTACCATGTTGCATCGACATAAGGACGGG
CGCAGGTAGGCAAGCCTAAGCGCTTGACAGGATGGGTGCTACAGGCAAAACGCCAAGGGTATCCAATGCGCCCGGAGAAA
GGAAAAAGGAGGACTCTTGACTTC------AGCGTCATTCATCGCTTGCGACTTCAGCAGATCAGCATCT----------
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-----------------------------------------------------------------------------TGA
ACAAGGATCACCAACTTCTTTTCCCAAGGGTCGTTTCAGTTTTCCTCGGGAGAG--------------------------
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-------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------SS-------S----
------SSSS---------S----------------------S--SSSSS-------S--------S-------------
---S------S------------------------------S---------------------SS----------S----
---------S--SS-------------S--------------S---S--S-S---------------S------------
--------------------S--------------------------S--------------------------------
----S---------------------------------------------------------------S-----------
--SSSSSS-SSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------S------------------------------SSSSS-----------------------------
------------------------------------------------------S-S-----------------------
-----S---------------------------SSSSS------------------S---------------------S-
-----------------------------------S--------------------------------------------
-------------------------------------SSSSSSSSSS---------------------------------
-----------S-------------------S-------S--------------------S-S------------S----
------------------------------------------------------SSS--S--------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------S---------SSS------S--------S---SS--SS-----SSSS------------
------------------S-------------------------------------------------------------
----------------------S---------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------S------------------------------------
-----------------------------------------S--------------------------------------
------------------------S--------SS---------------------------------------------
--------------------------------------------------------------------------------
--------S-----------S--S-----------------------S-------------------S-------SSS--
------S-----------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------S-------------------------------------------S------------------
---------------SS-------------------------------------------------S-------------
------------------S---------------S-S-S--S----------------------------------SS--
-------------------SS---------------------------------S-----------S--S----------
-----------S---------------------------------------------------SSS--------------
---------------------------------------------------------------------------S----
-------------------------------------------------------------------S------------
-------------------------------------------------------S------------------------
--------------------SS--------------------------------S--------------SSS--------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
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-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------SS-SSSSSSSSSS-------------SSSSSS------------------------------------
------------------SSSSSS-S------------------------------------------------------
---S--S-----------------SSSSSS------------------------S----S----------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-----------------------------------------------S--SS--SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_309
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ACAACCCGGCGATCTTCTTT-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------
>reverse_1816
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GATGGTTTCTGGTCGGTGGT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>forward_1477
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CGGCAGCGAGTCTAGACTAG-------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_2727
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------GTCGTGTCAGAAGACCGGTT------------------------------------------------------
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-------------------
>forward_2055
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGTGAGTGTAGTTTGCGGGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------
>reverse_6258
--------------------------------------------------------------------------------
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-----------------CCGTGATACGAACTCCCTCG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
