>input_sequence_36013
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-------------------------------------------ATGGAGTCCACGGTGAAGCAGGCCAGGAAAGAAGACG
AAGAGCAAGCGAGTGGCGGAATCCAGCGGATCCCGGAGGAATGCCTGGAGAAGGCCATCGGCCTGACCTCGCCGGCCGAT
GCCTGCCGCGCCGCCACGGTGTCGGCTGTGTTTCGATCGGCGGCGGACTCGGACGCCGTGTGGGAGCAGTTCCTGCCGCC
GGACTGCGACGCCGTGCTGGAGCGAGCCGTCCACCTCGTGGACTCCTCCTCCAAAAAAGATCTCTTCATGGAACTCAGCG
ACGAGCACGTCCTGCTCGACGACGGCAAGAGGGTGAGT----GCTAAATTTCCTGATG--------ACAAAAAGGCAACC
GATCTGC-TTTTCTTTTTTTAAACAGTTTTGCTAGAATTCATCTAGATGAGATTTAGTTTGGTCTCATTCACCTTTTTTA
GCCATTGGATGTGATGCTATAAGATGCGTATGTGCTAACGTGGGTTGTATCCGTTCTTATTTTTCATGTAAATGAGACCA
AATTACGTCTCATCTAGATGAGTTCTAGGTACTCCCTATTTTAAATACTTCCCCATCCCATAATATAAGATATTTTTGCT
AATTACTTTAGGTTGCAACTAGAACAATGCCCGTGCGTTGCAACGGGACAGGGCCGTACCTGGAAAATCAGAGGCCCTGT
GCAAATTAAAGTTAGGCCCGATGTGTTAAAGCAACAGAATAATATTTTTGTCAACCAGTATAGTTTTTCACAAAAATTAC
ACACGGTTGGAAGCAGAAGTTTTAAAGACATGTAGATAGCACATACCTAATTTGCTTTTTCTAGTTGTACTATGCTACTC
CCTATTTCATAATATAAGAGCGCTTTTGACACTACTATTATGGGACGGAGGGACTATTTTGGAAGACCTGTGAGATTGAA
AGAGCTGAGAGGAACTGATGGATCGTGATTAGAGAGAGATGCTTAGGGTGGCTTGTTCGAGTAAAATATTTCAAACAGTT
CTTTACTCTAGTACCTAATGCTTCAATTAAACACCTTGATTAACACATAAAATGGGGCACATGTGGTGCTGGGGCCCTGT
TCGGTCGCTCCTGTTGCATGTGCTCATGTACGGCCCTGTAACGGGATATAAATATTCTAATACATTAGCTCATGATTTAT
CTGTCAATAATAATAAGATTGTGTAAATAAATGTTCATCAAATTCTGACCGTGAATTACCTTATATTTTGATTGAAAATT
TGGTAAGTAAATTCAAGTGGAATTGGTTCAGAAAGTAAGTAAATTAAGATGATTGATTATCATATACATTCTTTAAGTAA
TAAAAAACGTTTTATATTGTGCGACGGAGGAAGTACCAATAA---------------------------------ATCTG
GCTAATT---ATGGGTG--TGTG---------CTAGAGTTTTGGGCTCCATCGATCCACCGGAGCCAAATGCTATATGCT
GTCATCAAGCGAGCTGGCAATCGCTTGGGGTAAAATCGATCTTTACTGGAGAGAGAGATTGGACCCGGATTCAAGGTAAT
TCCATGCTTGCA--------------------------------------------------------------------
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----TTTGCATATACAACCATACCATTTAAATTTGTGGTTA---------------------------------------
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----GTCGGTTTGAGTTTGTTAAAACTGCATGTAAATTGTTGTGTTCAT---TTGTTTGACAAGG-----TAGGTTCCCC
ATGGTCGCGGAGCTTATGTCGGTCTGCTGGTTCAGCATCTTTGGCGTGATCAATAGCAGGGAGCTCTCTCCCGGCACCCA
CTACGCGGCCTACCTCGTCTTCAAGCTTACTCACGATGCCTCCGGCCTCAGCTCCCGCAGCCAGATATCAAAGGTCGAGG
TAGGCGGGCAAGTGGTGGGGAGCGCTCGCACGGCGTCTCTCCATCCATGCAACCGTGCTTCCTGCAGTGGCGCTGCCATC
GGTGAGGCATCATCTTCAACGATGAACAACAATTGCGTCGTGAATCAGCCGCATGAGCACAAGGATGAGGAC------GA
AGGAGGCATCGTCAGGTACCCGCGCGAGAGGGTTGACGGCTGGCTGGAGCTAGAAATTGGCGACTTCCACACCAGCGCAG
GTGATGATTTCCTAGA--TCTAAGATAAAAGATTTTTTGTTGTTTCGTCGCTCTTCCTGCGGCCTCTGCACCGAGTTGAT
ATGCACACGGTCAACAACGCAACGCAGGTGATGATGCAGGCGCGGATGTTCCCATGGGACTGCACGAGTTCGAGGAGCTG
CAGTGGAAGAAGGGGCTCATCCTCGAAGGAATCGAGATAAGGCCTAAGAATTAA--------------------------
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---------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G566000
ACTACTAATGAATGAAATATTATTTGGACAGTTCATATGGAAATTAGCCCATCTTTTTTAATATAAATTGAGGCATGCTA
AGCGTCTCGGCTGAACTTTTGTAAAGATTGACCCAGTCGCGAGCCATCAAGCGGCCAAGCATGTTGCAGAATTTTTTTGC
AATTCGGGTAGTGTAGCATAAAACTCTTTTGCAACACCATGGCATGAAGGAGATGGTGCCGGCAGCTGCAAGAGGTTGAG
GTGGTGGCGGCATGGTCGGACACGGTTGATGGCGTCGGATGGCCATGCTGAGGATGGCAAAGACGGAGGTGCAGGGGCTG
GGCGGGGCTACAGTCAAAGAGTCCCGGAGGCTGATGGAGGGAGCCGCGCGTGCGGCAGTGAATCTTGCAGAGGCAACAGT
AGAGGAGCGCGGGGTAGGAAGAAGGACAAAGGTGGAGGCTTTGTTGGCGGAGGTGATCTAGTCGGTGGCAGGCGGGACCA
CCGATTGCGGGGTGGGGTGTGGCGGCGCAATGCACCTCTCACTCGTGGCGTGACCCAAGAGACGAGGGGAGCTCAGGAGG
CGTCATCTGAAGACAAGGACGCTTCTAGATATAAGAGATAGAGGGATGTGGTGTGTAGGTCCATGGGACAACATGGCAAA
CGGTAAGGAGACTGACACATGCATGGTCGCTCTGCAATATAGCCAATGTTGCGCCCAAAAAAGTTTCAACAAGGGTCGCG
TTGAAAAAGGGAGTACGCGTCCCCGTCCGATCGCAGTTGATCCAACGGCTCGCTGCGCGACGGACACGAGCGCTGAATCG
GTCGGGTGGTCCCAAATTTCCATATATTTTACCCTACCATCGAAAATACTCCATATAGATTAGCTATGAAATGTCACTAT
CTCACTAGTAGGAGTACTTCGCAGCTTATGACTCGTTCCTGCACTGCCTACACTGGCTTGCTAATTGACTGGTCGTCTTT
ATAGTAGGACGCCAAGCA---GCCTTGAACAGACCAAAGTTAGATGGAGTCCACGGTGAAGCAGGCCAGGAAAGAAGACG
AAGAGCAAGCGAGTGGCGGAATCCAGCGGATCCCGGAGGAATGCCTGGAGAAGGCCATCGGCCTGACCTCGCCGGCCGAT
GCCTGCCGCGCCGCCACGGTGTCGGCTGTGTTTCGATCGGCGGCGGACTCGGACGCCGTGTGGGAGCAGTTCCTGCCGCC
GGACTGCGACGCCGTGCTGGAGCGAGCCGTCCACCTCGTGGACTCCTCCTCCAAAAAAGATCTCTTCATGGAACTCAGCG
ACGAGCACGTCCTGCTCGACGACGGCAAGAGGGTGAGT----GCTAAATTTCCTGATG--------ACAAAAAGGCAACC
GATCTGC-TTTTCTTTTTTTAAACAGTTTTGCTAGAATTCATCTAGATGAGATTTAGTTTGGTCTCATTCACCTTTTTTA
GCCATTGGATGTGATGCTATAAGATGCGTATGTGCTAACGTGGGTTGTATCCGTTCTTATTTTTCATGTAAATGAGACCA
AATTACGTCTCATCTAGATGAGTTCTAGGTACTCCCTATTTTAAATACTTCCCCATCCCATAATATAAGATATTTTTGCT
AATTACTTTAGGTTGCAACTAGAACAATGCCCGTGCGTTGCAACGGGACAGGGCCGTACCTGGAAAATCAGAGGCCCTGT
GCAAATTAAAGTTAGGCCCGATGTGTTAAAGCAACAGAATAATATTTTTGTCAACCAGTATAGTTTTTCACAAAAATTAC
ACACGGTTGGAAGCAGAAGTTTTAAAGACATGTAGATAGCACATACCTAATTTGCTTTTTCTAGTTGTACTATGCTACTC
CCTATTTCATAATATAAGAGCGCTTTTGACACTACTATTATGGGACGGAGGGACTATTTTGGAAGACCTGTGAGATTGAA
AGAGCTGAGAGGAACTGATGGATCGTGATTAGAGAGAGATGCTTAGGGTGGCTTGTTCGAGTAAAATATTTCAAACAGTT
CTTTACTCTAGTACCTAATGCTTCAATTAAACACCTTGATTAACACATAAAATGGGGCACATGTGGTGCTGGGGCCCTGT
TCGGTCGCTCCTGTTGCATGTGCTCATGTACGGCCCTGTAACGGGATATAAATATTCTAATACATTAGCTCATGATTTAT
CTGTCAATAATAATAAGATTGTGTAAATAAATGTTCATCAAATTCTGACCGTGAATTACCTTATATTTTGATTGAAAATT
TGGTAAGTAAATTCAAGTGGAATTGGTTCAGAAAGTAAGTAAATTAAGATGATTGATTATCATATACATTCTTTAAGTAA
TAAAAAACGTTTTATATTGTGCGACGGAGGAAGTACCAATAA---------------------------------ATCTG
GCTAATT---ATGGGTG--TGTG---------CTAGAGTTTTGGGCTCCATCGATCCACCGGAGCCAAATGCTATATGCT
GTCATCAAGCGAGCTGGCAATCGCTTGGGGTAAAATCGATCTTTACTGGAGAGAGAGATTGGACCCGGATTCAAGGTAAT
TCCATGCTTGCA--------------------------------------------------------------------
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----TTTGCATATACAACCATACCATTTAAATTTGTGGTTA---------------------------------------
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----GTCGGTTTGAGTTTGTTAAAACTGCATGTAAATTGTTGTGTTCAT---TTGTTTGACAAGG-----TAGGTTCCCC
ATGGTCGCGGAGCTTATGTCGGTCTGCTGGTTCAGCATCTTTGGCGTGATCAATAGCAGGGAGCTCTCTCCCGGCACCCA
CTACGCGGCCTACCTCGTCTTCAAGCTTACTCACGATGCCTCCGGCCTCAGCTCCCGCAGCCAGATATCAAAGGTCGAGG
TAGGCGGGCAAGTGGTGGGGAGCGCTCGCACGGCGTCTCTCCATCCATGCAACCGTGCTTCCTGCAGTGGCGCTGCCATC
GGTGAGGCATCATCTTCAACGATGAACAACAATTGCGTCGTGAATCAGCCGCATGAGCACAAGGATGAGGAC------GA
AGGAGGCATCGTCAGGTACCCGCGCGAGAGGGTTGACGGCTGGCTGGAGCTAGAAATTGGCGACTTCCACACCAGCGCAG
GTGATGATTTCCTAGA--TCTAAGATAAAAGATTTTTTGTTGTTTCGTCGCTCTTCCTGCGGCCTCTGCACCGAGTTGAT
ATGCACACGGTCAACAACGCAACGCAGGTGATGATGCAGGCGCGGATGTTCCCATGGGACTGCACGAGTTCGAGGAGCTG
CAGTGGAAGAAGGGGCTCATCCTCGAAGGAATCGAGATAAGGCCTAAGAATTAATTAATATGATAATTATATCTCTGTAT
CATA----------------------------------------------------------------------------
--------------------------------------------------TACTGTATATAGGGATTGGAGTTGCTTAAT
TACCAAGAAATTTATGTCTGGCTTTGGGTGATGAGCTATAATCGCATAGTTGTGGTGCTCAAAATA-------GTACATT
TGATGGT------TTAAATAATCTGCTTCCTAGGTCAGGAGCCGGTAGGCAGCAACAAATTTGGTGTGTGTCATTCAAAT
TGAATTATCTGGCTGTAATTAACGGCAACGAATTGAATATTGCGGTGTCCCTTTCACCTTTGCTTTAACTAGCACACTAT
TTATTTATGGACGCCGATAACTGCCACACGTGTGGTATATTAGGCATCCGTCTACACATCGTGTGTGGCGTGAGCACGAG
GCAGCCCACACGGACTGTGTGTGGGCGGACATTAGAATTGCCCACACGTGTGGGCGCAGCTACTTCGTG-CACACGCCCA
ACAAGTAGTACTCATCTCCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTAAGGTAGGTA
CCCACGGGATGACGATTTAGTTGCCATCCGGGATGGCAGATGTAGTTATCCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTTTATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTGTCACGTGTGGTCCAA
CCATAGTTACCATGTATGGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGT
CTAGCAACGAATTATAGTTGCCATGTGTGTTTGCCTAGTTGCCCCGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGT-GGGCGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGATTGTGTGGGCAGAAACTAG
>chr4A_929
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------------------------------------------------TACACTTGCTCGCTAATTGATTGGTCGTCTT-
ATAGTAGGACCCCGAGCC---GCCTTGAACAGGTCAAAGTTGGATGGAGTCCACCATGAAGCAGGCCAGGAAAGAATACG
AAGAGCAAGTGAGTGGCGGAGTCCAGCGGATCCCGGAGGAATGCCTGGAGAAGGCCATCGGCCTGACCTCGCCGGCCGAT
GCCTGCCGCGCCTCCGCGGTGTCGGCCGCGTTTCGATCGGCGGCGGACTCGGACGCCGTGTGGGAGCGGTTCCTCCCGCC
GGACTGCGACGCCATGCTGGAGCGAGCCGTCCACGTCGTAGACTCCTCCTCCAAAAAAGATCTCTTCATGGAACTCAGCG
ACGAGCACATCCTGCTCGATGACGGCAAAAGGGTGAGTGAGTGCTAAATTTCCTGACA--------GCAAAACGGCAACC
GATCTGT-------------------------------------------------------------------------
-----------------------------------------------------TTCTTATTTTATTTTT-----------
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-----------------------------GAACTAGCAATCA---------------------------------ATCTG
GCTAATT---ATGTATGCATGTG---------CTAGAGTTTTGGGCTCCATCGATCTACTGGAGCCAAGTGCTACATGCT
GTCAGCAAGCGAGCTGGCAATCGCTTGGGGTAAAATCGATCTTTACTGGAGAGAGAGGTTGGACCCGGATTCAAGGTAAT
TCCACGCTTGCG--------------------------------------------------------------------
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----TTTGCACATACAACAGTACCATTTAAATTTGAGGTTA---------------------------------------
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----GTTGGCTTGAGTTTGTTAAA-----ATGTAAATTGTTGTGTTCATTTGTTGTTTGACAAGG-----TAGGTTCCCC
ATGGTCGCGGAGCTTATTTCGGTCTGCTGGTTCAGCATCTTCGGCGTGATCAATAGCAGGGAGCTCTCTCCCAGCACCCA
CTACGCGGCCTACCTCGTCTTCAAGCTTACTCACGATGCCTCTGGCCTCAGCTCCCGCAGTCAGATATCATACGTTGAGG
TAGGCGGCCAAGTGGTGGGGAGCGCCCGCACGGCGTCTTTCCATCCATGCAACCGTGCTTCCTGCAGCGGCGCCGCCATC
GAGGAGGCATCATCTTCAACGATGAGCAACAATTGCGCCGTGAATCAGCCGCATGAGCACAAGGAGGAGGAC------GA
AGGAGGCATCGTGAGGTACCCGCGCGAGAGGGTCGACGGCTGACTGGAGCTAGAAATGGGCGACTTCCACACCGGCACAG
GT------------------------------------------------------------------------------
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>chr5B_942
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-------------------------------------------------------------TAATTGATTGGTCGTCTT-
ATAGTAGGACCCCAAGCAGCAGCCTTGGACAGATCAAAGTTGGATGGAGTCCACCATGAAGCGGGAGAGGAAAGAAAACG
AAGAACAAGAGACTGGCGGAATCCAACGGATCCCGGAGGAATGCCTGGCGAAGGCCGTCGGCCTGACCTCGCCGGCCGAC
GCCTGCCGGGCTGCCGCGGTGTCGGCCGCGTTCCGGTCGGCGGCGGACTCAGACGCCATGTGGGAGCAGTTCCTGCCTCC
GGACTGCGACGCCGTCCTGGAGCGAGCCGTCCACCTCGTGGACTCCACCTCCAAGAAGGATCTCTTCATGGAACTCAGTG
ATGATCACGTCCTGCTCGACGACGGCAAGAGGGTGAGT----TCTAAATTTCCTGACA--------ACAAAAGGACAACC
GATTTGC-TCTTTTTCTTTTTCCC--------------------------------------------------------
--------------------------------------------------------------------T-----------
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-----------------------------GAACTACCAATCA---------------------------------ATCTG
GTTAATT---CTGGTTAATAATTTATGTGCTATTAGAGTTTTGGGCTCCATCGGTCCACTGGCGCCAAGTGCTACATGAT
GTCAGCAAGCGAGCTGGCAATCGCTTGGGTTAAAATCGATCTTTACTGGAGAGAGAGGTTGGACCCGGATTCAAGGTAAT
TCCATGCTTGCA--------------------------------------------------------------------
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----TTTGCATGTACAACCATACCATTTAAATTTGTGGTTA---------------------------------------
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----GTCGGTTTGAGTTTGTTAAAACTGCATGTAAATTGTTGTGTTCAT---TTGTTTGACAAGG-----TAGGTTCCCC
ATGGTCGCGGAGCTTATGTCCGTCTGCTGGTTCAGCATATTCGGCGTCATCAATAGCAGGGAGCTTTCTCCCAGCACCCA
CTACGCGGCCTACCTCGTCTTCAAGCTTGCTCACGATGCCTCTGGCCTCAGCTCCCGCAGTCAGATATCATACGTTGAGG
TAGGCGGCCAAGTGGTGGGGAGCGCCCGCACGGCGTCTTTCCATCCATGCAACCGTGCTTCCTGCAGCGGCGCTGCCATC
GAGGAGGCATCATCTTCAACGATGAACAACAATTGCGTCGTGAATCAGCCGCATGAGCACAAGGAGGAGGAGGATGAGGA
AGGAGGCATCGTCAGGTACCCGCGCGAGAGGGTCGACGGCTGGCTGGAGCTAGAAATGGGCGACTTCCACACCGGCACAG
GTGATGACTTTTCTTAGGTCTAAGATAGAATATTTTTTGTTGTTTTGTCGCTCTTCCCGCGGC--CTGCACCGAGTTGAT
GCACAAGG---CAACAACGCAACGCAGGTCATGACGCGGTCGTGGATGTTCGCATGGAACTGCACGAGTTCGAGGAGCTG
CAGTGGAAGAAGGGGCTCATCCTCGAAGGAATTGAGATAAGGCCTAAGAATTAATTAATATGATTACTATATCTCTGTGT
ATCATATACTCCCTCCGTCCGGAAATATTTGTCATCAAAATGGATAAAAAGAGATGTATCTAGACGTATTTTAATTCTAA
ATACATCTTTATTTATTTATTTTAATGACAAGTATTTTGGACGGAGGGAGTACTGTATATAGGGATTGGAGTTGCTTAAT
TACCAGGAAACTTATGTCTGGCTTTGGGTGATGAGCTATAATCGCATAGTTGTGGTGCTCAAAATACGTTGTAGTACACT
TAATGGTGTGTAATTAAATAATCTGCTTCCTAGGTCAGGAGCCGATAGGCAGCAACAAATTTGGTGTGTGTAATTCAAAT
GGATTTATCTGGCTCTAATTAACTGCAAGGAATTGAACACTGCCGT----------------------------------
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>chr5B_1057
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-------------------AATCCAGCGAGTCCCGGAGGAGTGCCTGACCACAGTCATCGGCCTGACCTCGCCGGCCGAC
GCCTGCCGCTCCGCTGTGGTGTCCGCCGGCTTCCGGTCAGCGGCGGACTCGGACGCCGTGTGGGAGCGGTTCCTGCCTCT
GGACTGCGATGCCGTCCTGGAGCGAGCGGTCCACTTCGTGGATTCCTCCTCCAGGAAGGAGCTCTTCATGGATCTCAGCG
ACGAGCACGTCCTCCTCGACGACGGCAAAAGGGTGAGT----GCTAATTTTCCTGATGCTAAGACGACAAAAAGGTAGAT
CATCGATTTGTTCGTCGTTTTCTC--------------------------------------------------------
--------------------------------------------------------------------T-----------
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-----------------------------GAGCTAGTAGTGATTAATCGATTGGATACATACATGGCTTCTAACGATCTG
GTTAATGTACATATATCTATGTG---------TTAGAGTTTCGGGCTCCAGCGATCGAGTGGCGCCAAATGCTACATGTT
ATCTGTGAGGGAGATGGCAATCGCTTGGGTTAAAATAGATCTTTACTGGAGAGAGAGGTCGGACCCAGATTCGAGGTAAT
TCATTCCCATGTACTAGAAGAATTCCTTTTTCTTTAGAAGTCTATGTACAGGAATTCTACTGCACCACATAAACAAGGCT
ATATATAATACTACTCTAGATTTTTGTTATTGCGTCAGTCACTTCCTTCCTTCTTCCCAACCTTGCTGGAGAAGAATCAG
CCCCACTATCTATGCTAGGGAAAAGTCATAGTCTCATCATCTATCTATCTTAGGGGAAAGCTAAGTCACAACCCCATTAT
CCATCTTAGGGGTTGTGGGGTGGGGGGATGCAGGGGATCGCCGGAGATTCTCACCGGTGGTGCAGGACTTTGAGGGATGG
CTGGGGCGGTTGCCAGCAACGGCGGTGGGGAAAGGTTGAGGGAAAGGCGGGGCAGCGAGGCGGTGCGCGGTAGCATCCGC
TGACCGCGGGGGTGGGGACAGACGGATGGGGCGGGGTAGGCCGGCGGTTGCAGAAAAAGGATGGATCGGATCGTGGCTTG
AGGAGGAAGACGGTTGGGAGGAAGAACGTGGCATGTGAGTGGTTAGATGCATATCAGATAGACAAAAAACTAAGTTACTG
ATGAAACTTTTCTTCTGGCACCTGTCTCCTTTATAGCTAGTACTATTATACTAGTACTTCCTCCGTCCAGAAATAAGTCT
ACATTTGGCATTTAAAATTTATCCACAAAAAAGTGTAGTTTTATCTTCTCAATGCACTTTAAAATAGAAAAAAATATTTC
CCTCTCATCACACGATAATCAAGACCAATAACATTCAACACATGGTCTTCTCACTTTTTAAATGCACTTAACTCATTGAA
GGTGGGCTAATTAGAGAGCAGAGAGATGATGACTTGCACATTTCCAATGTATTTTTCACTCCACTGCATAATATGTCCTA
AAATTTCTATATGTACACTTACTTGTGGACGGAGGGAGTAGTGTATATATGATACCCCACAAAAAAGTAGTGTATATATG
ATAATGATAGCAAGATCTCCTTCATGGTCGGTAAATCTACAGTGTGTGCTTATAAATTAAATGTCGATGATTTAATTATA
CAAGGTTGCCTTGTGTTCCTAA----------------------TTAAT---TTGCCTGGCAAGCTTAATTAGGTTCTCC
ATGGTGGCAGAGCTCATGTCAGTGTGCTGGCTGAGCATCTCTGGCCACATCAGCACCAAGGAGCTCTCTCCGGGCACACA
CTACGCGGCCTACCTCGTCTTCAAGCTCACTCACGACGCCTCCGGCCTCGCCTCCC------------------------
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>chr3D_3506
ATTTACTGAA----------------------------------------------------------------------
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--------GGACGCCGATAACTGCCACACGTGTGGTATATTAGGCATCCGCCCACACATCGTGTGTGGCGTGAGCACGAG
GCAGCCCATACGGGCTGTGTGTGAGCGTCCATTAGAATTGCCCACACGTGTGGGCGCGGCTATTTCGTGCCACACGCCTA
ACAAGTACTACTCATCTCCACCTCGCGCATGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACATTAGGTA
CCCAC-GGATGACGATTTAGTTGCCATCCGGGATGGCAGATGTAGTTATTCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTCTATCTGTTTGGGTTAACTATAGTAGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CTTGTGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGCCATGTGTGT----CTGGTTGCCACGTACGCGCAACTGCAGTTGCCGT
CTAGCAAAGAATCACAGTTGCCATGTGTGTGTACCAAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGT-GG-CGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGGTTGTGTGGGCAGAAACTAG
>chr5D_3512
TTATTG--------------------------------------------------------------------------
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---------GACGCCAATATCCACCACACGTGTAGTATATTAGACATCCGCCCACACATCGTGTGTGGCGTGAGCACGAG
GCAGCCCACACGGGCTGTGTGTGGGCGGGCATTAGAATTTCCCACACGTGTGGGCGCAGCTACTTCGTGCCACACGCCCA
ACAAGTACTACTCATCTGCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACGTTAGGTA
CCTGCGGGATGACGATTTAGTTGCCATCCGGGATGGCAGATGTAGTTATCCGGGATGGAGAGTGTAGTTGTAAAAGCATG
GCAACTCTATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCATAGTTGC
CGTGTGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTGTCACATGTGGTCCAA
CCATGGTTGCCATGTATGGTTAATCACAGTTGTCATGTGTGTTTATCTGGTTGCCATGTACGCGCAACTGCAGTTGCCGT
CTAGCAACGAATTATAGTTGCCATGTGTGTTTACCAAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGT-GTCATGTGGG-CGAAAAGCAGTTCGCCTACACGCGCATGGACTAGGTGGTGGCTGTGTAGGCAGAAACTAG
>chr1D_3514
--------------------------------------------------------------------------------
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------ATGGACGCCGATAACTGCCGCACGTGTGGTATATTAGGCATCCGCCCACACACGGTGTGTGGCGTGAGCACGAG
GCAGCCCACACGGGCTGTGTGTGGGCGGACATTAGAATTGTCCACACGTGTGGGTGCAGCTACTTCGTGCCACACGCCCA
ACAAGTACTACTCATCTCCACCTCGCGCATGTGGCACGAAGCAAAAATGCCCACACGTCCTGGCGCAGCTACATAAGGTA
CCCGCGGGATGACGATTTAGTTGCCATCTGGGATGGCAGATGTAGTTATCCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTTTATCTGTTTCGGTTAACTATAGTTGTCATATCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATTGTCAAACAGTAGTTGCCATATGTGTTTACCTAGTTATCACGTGTGGTCCAA
CCATAGTTGCCATGTA-GGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCATGTACGTGCAACTGCAGTTGTCGT
CTAGCAATGACTTATAGTTGCCATGTGTATTTACCTAGTTGCCACGTTCGTGTAACTGCAGTTGCCATCCACAACGTATG
AGTCATCGTGTGGG-CGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGGCTGTGTGAGCAGAAACTAG
>chr7D_3515
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-------TGGACGCCGATAACTGCCACACGTGTGGTATATTAGGCATCCGCCCACACATCGTGTGTGGTGTGAGCACGAG
GCAGCCCACACAGGCTGTGTGTGAGCGTCCATTAGAATTTCCCACACGTGTGGGCGCGGCTATTTCGTGCCACACGTCCA
ACAAGTACTACTCATCTCCACCTCGCGCATGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACGTTAGGTA
CCCGCGGGATGACGATTTAGTTGCCATCCGGGATGGTAGATGTAGTTATTCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTCTATCTGTTTTGGTTAACTATAGTAGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTGTGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGT
CTAGCAAAGAATCACAGTTGCCATGTGTGTGTACCAAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTTGTCGTGT-GG-CGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGGCTGTGTGGGCAGAAACTAG
>chr3D_3516
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--------GGACGCCGATAACTGCCGCACGTGTGGTATATTAGGCATCCGCCCACATATCGTGTGTGGCGTGAGTACGAG
GCAGCCCACACGGGCTGTGTGTGGGCGCACATTAGAATTGCCCACACGTGTGGGCGTAGCTACTTCGTGCCACACGCCCA
ACAAGTACTACTCATCTCCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACGTTAGGTA
CCTGCGGGATGACGATTTAGTTGCCATCCGGGATGGCAGATGTAGTTATCCGGGATGGCAAGTATAGTTGTAAAAGCATG
GCAACTCTATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATATATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTGTGTTTATCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGT
CTAGCAACGAATTATAGTTGCCATGTGTGTTTACCTAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGTGGG-CGAAAAGCAGTTCGCCCACACGCGAATGGACTAGGTGGTGGCTGTGTGGGCAGAAACT--
>chr4A_3516
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--------GGACGTCGATAACTGCCACACGTGTGGTATCTTAGGCATCCGCCCACACACCGTGTGTGGCGTGAGTATGAG
GCAGTCCACACGGGCTGTGTGTGGGCGGACATTAGAATTGCCCACACGTGTGGGCGCAGCTACTTCGTGCCACACGCCCA
ACAAATACTACTCACCT-CACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTAGCGCAGCTACGTTAGGTA
CCCTCGGGATAACGATTTAGTTGCCATCCGGGATGACAGATGTAGTTATCCGGGATGGCAAGTGTAGTTGTAAAAACATG
GCAACTCTATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCATGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATGGTCAACCAGTAGTTGCCATGTGTGTTTATCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGTCATGTGTGTTTATCTGGTTGCCACGTACGCGCGACTGCAGTTGCCGT
CTAGCAATGAATTATAGTTGCCATGTGTGTTTGCCTGGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGTGGG-CGAAAAGCAGTTTGCCCACACGCGCATGGACTAGATGGTGGCTGTGTGGGCAGAAACTAG
>chr6D_3516
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--------GGATGCCGATATCCACCACACGTGTGGTATATTAGGCATCCGCCCACACACCGTGTGTGGCGTGAGCAGGAG
GCAGCCCACACGGGCTGTGTGTGGATGGGCATTAGAATTGCCCACACATGTGGGCGCAGCTACTTCGTGCCACACGCCCA
ACAAGTACTACTCATCTCCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACGTTAGGTT
CTCGCGGGATGATGATTTAGTTGCCATCCGGGATGGAAGATGTAGTTATCCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTCTATCTGATTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTGTGTGATTAACTACTTGCCACATATGATCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTATCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCGCAACTACAGTTGCCGT
CTAGCAACGAATTATAGTTGTCATGTGTGTTTACCTAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGT-GTCGTGTGGG-CGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGGCTGTGTGGGCAGGAACTAG
>chr1D_3517
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---------GACGCCGATAACTGCCACACGTGTGGTATATTAGGCATCCGCCCACACACCGTGTGTGGCGTGAGCACGAG
GCAGTCCACACGGGCTATGTGTGGGCGGATATTAGAATTGCCCACACGTGTGGGCGCAGCTACTTCGTGCCACACGTTCA
ACAAGAACTACTCATCTCCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGC-CAACTACGTTAGGTG
CCCGCGGGATGACGATTTAGTTGCCATCCGGGATGGCAAATGTAGTTATCTGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTCCATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATAGTCAAACAGTAGTTGCCATGTGTGTTTACCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGTCATGTATGGTTAACCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCACAACTGCAGTTGCCGT
CTAGCAACGAATTATAGTTGCCATGTGTGTTTACTTAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGTGGG-CGAAAAGCAATTCGCCCACACGCGCATGGACTAGGTGGTGGTTGTGTGGGCAGAACTAG-
>chr5D_3547
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---------------------------------------TTATGCATCCGCCCACACATCGTGTGTGGCGTGAGTACGAG
GCAGCCCACACGGACTGTGTGTGGGCGCACATTAGAATTGCCCACACGTGTGGGCGTAGCTACTTCGTGCCACACGCCCA
ACAAGTACTACTCATCTCCACCTCGCGCGTGTGGCACGAAGCAAGAATGCCCACACGTCCTGGCGCAGCTACGTTAGGTA
CCTGCGGGACGACGATTTAGTTGCCATCCGGGATGACAGATGTAGTTATCCGGGATGGCAAGTGTAGTTGTAAAAGCATG
GCAACTCTATCTGTTTTGGTTAACTATAGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCGTAGTTGC
CGTATGTGATTAACTACTTGCCACATATGGTCAAACAGTAGTTGCCATGTATGTTTACCTAGTTGTCACGTGTGGTCCAA
CCATAGTTGCCATGTATGGTTAATCACAGTTGCCATGTGTGTTTATCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGT
CTAGCAATGAATTATAGTTGTCATGTGTGTTTACCTAGTTGCCACGTTCGCGTAACTGCAGTTGCCATCCACAACGTAGG
AGTCGTCGTGTGGG-CGAAAAGCAGTTCGCCCACACGCGCATGGACTAGGTGGTGGCTGTGTGGGCAGAAACTAG
>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S---------S----------S
----------S----------------------S-------S------------SS--------------------S---
---------S----------------------------------------------------------------------
---------------S----------S-S---------------------------------------------------
--------------------------------------------------------------------------------
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---------S-----S----SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SSS-S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-------S---------------------------------------
--------------S--------------------------------------------S--------------S-----
----S----------------------------------------------------S----------------------
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------------------------------------------------------------S---------S-S--S----
-------S-----------------S------------S----------------------------S------------
-SS--------------------------------------------------------------S--------------
---------------------------------S-----------------------S---------------S--S---
-------S--SSSSS------------S--S--------------S-----------S-----SS---------------
SSS--SSSSSS------------------S----S--S-S--S--------S-----S----------------------
--------------------------------S-------------------------------S-S-----------S-
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S----S-------------------------------------------------------------------S-
-S------------------------------------------S--------------------------S--------
S--S----------S--------S----S--------S-S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS--------------------------------------------S-S---------------------------
--------------------------------------------------------------------------------
-------S---------------------------------------------------------------S-S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------S----------------------------------------S-------------------
>forward_935
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-----------------------------------TTCCTGCACTGCCTACACTG-------------------------
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>reverse_2337
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----------------TTGTGCGACGGAGGAAGTAC--------------------------------------------
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>forward_1670
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--------------------------------------------------GGGCCGTACCTGGAAAATCA----------
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>reverse_4726
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-----TATGGACGCCGATAACTGCC-------------------------------------------------------
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---------------------------------------------------------------------------
