>input_sequence_35951
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---------------------------------------------ATGTACGCGGAAACGGAGCCCGGGGCCGCCGCGGA
GCGCACGGCGTTCCGGCGGGCCGAGAAGCAGTACAAGCTCTACAAGCCGCCCAGTCGCAAGGGCAGGTCGAAATCCAGGT
CTCTCTCTCTCT-----CCCTCTGCCATCTCTGTGCGGGAACAGCAGAGCAGAACCCTGACTTTTCAAGCGCTGCAGGGG
CAAGCAAGCCGGTGGTGGTGGATTTGGCGGCGGCGGCGGCGGCGGGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGC
TTGCTGCCGGAAAAGGCGAGCTGCCCGCCGGGATCCGGAGGTGCGACCGCGCCGGCTTCCACCTGCCCGTGTTCTGCTTC
CTCGACCGGCCGGGTAACTCCACAATT------------------------------------------CATGCTCCAGT
TTGGATTTTTGTTCTTACAATTTACCAAGGCAGGACATTGCATTTGAACAGTGGCAACTTGCAAAAA-------------
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---------------------------------------ATTACAACTTTTCAGTAATTATTAGGGTTTAGCTTACCTAT
TTATGTCAATATTTCAGCCTCCAACACTTGATCGTCATACCTAATAGGCATCAATCATCCTAATCTCATTATACT---GT
TCA--TGTGAAATAGTACTGATACCCTTCGCATAACTC-------TGTAGGATTCTATTTCATCCCTGGTGCTCTATCTA
CCGAGGAACAGTGCTATTGGATCAGGGAAAGCTTGAAAACATTCCCACAGCCTCCTAATAGAACCAACTTGACTGCTACA
TACGGTCCAATTTCTGACTTGCTCATTGCTGCTAAAAACCAGAAGATTTTGGTTGAAGTGGAAAGTTCCAGTGGCAAACC
AAGAGATGAGCAGAATAATGTTGGGGAAAATGCACATCCGGGTAAATTCAAATTTGTGGATGACTCAGAGATCCAAAAGG
AGGAAAGACCTAAGTCGACCATGGCAGCTGCTCTTGTGCGCAAGCTCCGG---TGGAGCACCCTTGGCTTGCAATTTGAT
TGGTCAAAAGTATGTATGTACAATT--------------GATGTGTCTTTATTTTCATTTTTCTTGAATTTAATTCTTTT
AGCTTCTGATGGTATTGAAATATGCT---ACTTTACATGTGAATATGAATAAACCAGCAGGCATATTTTTCTTCCAAATT
TTCTGCAGTTGCGACGAGCAAGCCCAATTCA-TATAATTATATTACGATGACGATGAATTCATAATTCCATGTTAGCGCA
TAACAATATTT---------------------------------------------------------------TATTAC
TTAAGGAGCTTTGTTTGATTACGATAGTCCTTCCTTGCAAAGCTG-TTTAAGCATGATGATCTCTGAAATCGTTAT--GC
ATCCAATCCCAGTGTGCATACATCATACACTAATATAATGATGCAACTTATTCTCATACTCAGCCATGAAACTTGATAGC
TGCAATCTCTTGCGCGGTGCTTGCAGTTAATTAAAATCATATACTTATTGCACAGTAAGATACACTTTTGGTTACAACTG
CATATTAACCATTTCCTGTTTCTGTCAGCGTAACTATGATGTATCGCTTCCACATAACAAGATTCCAGATGACCTTGCTA
CTCTAGCAAAAAAGATGGCCGTTCCAGCAATGCCTTCTGGAGAAGAATTCACCGCAGAAGCAGCCATCGTGAACTATTAT
GGTCCAAGTATGTATTTCAAACA---------TGAATAACCTCGTA-------------GAT--ATACACCATGGCACAT
TACCTCGAAGTTGCATCCTTCCCTCTCTGTCCATACTGAAACAATAAGCTTTGACTTCTGTAGGCGACATGCTTGGTGGC
CATGTTGATGACATGGAAGCAGATTGGACAAAACCTATTGTGAGCATAAGGTACTACGGTTCAG----TTGCTTATATAA
TGATCTTCATTTGAGTGTAGTCTCTTACTTTTTTGTTGTT----TTAGTTTGGGTTGCAAGTGTATTTTTCTGCTTGGAG
GGAAGACAAGGGATGAAGCTCCAACGCCAATGTTCCTGCGAAGTGGTGATATTGTACTGATGGCTGGGGAAGCACGAGAG
CGCTTCCATGGTAATTTATTTATTTTTAATGGGAAAAAGATTATGTCTTAATAAGAAAGTTAACTGAAA--TACCATGGA
TCATCAGCTTTCTAGAATAACTCATGGCCTCTATTCTACAGGTGTCCCACGGATCTTCACAGAGGGTGACCAGCAAGATA
TCTCTGGGCTGGTATCAGAACTATCTGATGATGATGACCGCTTTATATTGGACTACATTCATAATTCAAGGATAAATATC
AACATAAGACAAGTATACTGA-----------------------------------------------------------
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------------------------------------------------------------------
>chr3D_1_TraesCS3D01G017600
GGCCGTGTCTTGTGGAGATGGTGTGGGTGATGACTTTGTTGCACGCGTACGGGTTCACCGTGAACGAGAAGTTTCCCTCG
T-------------------------------GATCTTGATTTTGATCCAGAAGGTGTCCGTCAGGGCGCTGCTCGACTC
GAGTATCAGATTATTCTGTGGATCGACGGTGTCTCCTCTCTGCGAGGACCAGAGGTGGCAACCAAAGCCGTCGGTGGCGG
CGAAGGACCCCGTGAAGCGGAAGCGAGGACGCACGGTGAAGAGCTCCACCCGATACTGAGAAAAGGAGTAGGCTAAGTTC
AGGTTTTGGCTGTCTCCGTTGTAGCAGATCATGTGACCCGGTGGTGGATAGTCCCTCTCGTCGCAGCCGTCG-----TCC
TCGCTGATGTAGTTGGCCATGTCCTGCGGTCTGTAGAACCCCCCATTGTCCTCATCGTCATACTC----GCTGCTCCTGC
GGTCGTCGTCGTCATCATCATCGCCGCTGCCGCTCACAATGATGCCATCATTGCCGACGCCATGGAGCCTGCTGCCATCG
TTGTCTCCCCCGGCGCCATCACCACCGATGCCATGGAG------------------------CTCTTTCTGGTTGAACTC
GGCAGCAGATCCTTTCGTCTCTGCCGTTCCTGTTCCTGTAGCGGACTCAATGGTGCATGCCTGCAGGTCGCACAAGACGG
CCCTCGAGAATGGCCTTTCCGGCGGCCCTCCGGCGGCAGCCATACCGCTCATGCCCTCGCCAAGA-TCGCCGGCGGTAAT
GAAGCCCTAGATCGATCTGCA-GGTTGATTA---ACTTCCGTCTCCTGAGACAGACCT-----CCTAATTTATCCACGCC
ATCCCAATCAAACCTGGGCCGGGCCTGGTTCTGTGCACAGTTCCTAGCCCAGTCGAGGAGGG-GGAGACAGGAACCTGGA
CCGAAACTGGTTCGGCGC--ACTATTAACTTCCGTGGGCCAAGACCACCAATCCGAAGGGGAAAAAC--AAGAGGGTACA
GCGAGAACGGCGGCGGCGG------CGGCGGCACACTTGCCGGCGATGTACGCGGAAACGGAGCCCGGGGCCGCCGCGGA
GCGCACGGCGTTCCGGCGGGCCGAGAAGCAGTACAAGCTCTACAAGCCGCCCAGTCGCAAGGGCAGGTCGAAATCCAGGT
CTCTCTCTCTCT-----CCCTCTGCCATCTCTGTGCGGGAACAGCAGAGCAGAACCCTGACTTTTCAAGCGCTGCAGGGG
CAAGCAAGCCGGTGGTGGTGGATTTGGCGGCGGCGGCGGCGGCGGGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGC
TTGCTGCCGGAAAAGGCGAGCTGCCCGCCGGGATCCGGAGGTGCGACCGCGCCGGCTTCCACCTGCCCGTGTTCTGCTTC
CTCGACCGGCCGGGTAACTCCACAATT------------------------------------------CATGCTCCAGT
TTGGATTTTTGTTCTTACAATTTACCAAGGCAGGACATTGCATTTGAACAGTGGCAACTTGCAAAAA-------------
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---------------------------------------ATTACAACTTTTCAGTAATTATTAGGGTTTAGCTTACCTAT
TTATGTCAATATTTCAGCCTCCAACACTTGATCGTCATACCTAATAGGCATCAATCATCCTAATCTCATTATACT---GT
TCA--TGTGAAATAGTACTGATACCCTTCGCATAACTC-------TGTAGGATTCTATTTCATCCCTGGTGCTCTATCTA
CCGAGGAACAGTGCTATTGGATCAGGGAAAGCTTGAAAACATTCCCACAGCCTCCTAATAGAACCAACTTGACTGCTACA
TACGGTCCAATTTCTGACTTGCTCATTGCTGCTAAAAACCAGAAGATTTTGGTTGAAGTGGAAAGTTCCAGTGGCAAACC
AAGAGATGAGCAGAATAATGTTGGGGAAAATGCACATCCGGGTAAATTCAAATTTGTGGATGACTCAGAGATCCAAAAGG
AGGAAAGACCTAAGTCGACCATGGCAGCTGCTCTTGTGCGCAAGCTCCGG---TGGAGCACCCTTGGCTTGCAATTTGAT
TGGTCAAAAGTATGTATGTACAATT--------------GATGTGTCTTTATTTTCATTTTTCTTGAATTTAATTCTTTT
AGCTTCTGATGGTATTGAAATATGCT---ACTTTACATGTGAATATGAATAAACCAGCAGGCATATTTTTCTTCCAAATT
TTCTGCAGTTGCGACGAGCAAGCCCAATTCA-TATAATTATATTACGATGACGATGAATTCATAATTCCATGTTAGCGCA
TAACAATATTT---------------------------------------------------------------TATTAC
TTAAGGAGCTTTGTTTGATTACGATAGTCCTTCCTTGCAAAGCTG-TTTAAGCATGATGATCTCTGAAATCGTTAT--GC
ATCCAATCCCAGTGTGCATACATCATACACTAATATAATGATGCAACTTATTCTCATACTCAGCCATGAAACTTGATAGC
TGCAATCTCTTGCGCGGTGCTTGCAGTTAATTAAAATCATATACTTATTGCACAGTAAGATACACTTTTGGTTACAACTG
CATATTAACCATTTCCTGTTTCTGTCAGCGTAACTATGATGTATCGCTTCCACATAACAAGATTCCAGATGACCTTGCTA
CTCTAGCAAAAAAGATGGCCGTTCCAGCAATGCCTTCTGGAGAAGAATTCACCGCAGAAGCAGCCATCGTGAACTATTAT
GGTCCAAGTATGTATTTCAAACA---------TGAATAACCTCGTA-------------GAT--ATACACCATGGCACAT
TACCTCGAAGTTGCATCCTTCCCTCTCTGTCCATACTGAAACAATAAGCTTTGACTTCTGTAGGCGACATGCTTGGTGGC
CATGTTGATGACATGGAAGCAGATTGGACAAAACCTATTGTGAGCATAAGGTACTACGGTTCAG----TTGCTTATATAA
TGATCTTCATTTGAGTGTAGTCTCTTACTTTTTTGTTGTT----TTAGTTTGGGTTGCAAGTGTATTTTTCTGCTTGGAG
GGAAGACAAGGGATGAAGCTCCAACGCCAATGTTCCTGCGAAGTGGTGATATTGTACTGATGGCTGGGGAAGCACGAGAG
CGCTTCCATGGTAATTTATTTATTTTTAATGGGAAAAAGATTATGTCTTAATAAGAAAGTTAACTGAAA--TACCATGGA
TCATCAGCTTTCTAGAATAACTCATGGCCTCTATTCTACAGGTGTCCCACGGATCTTCACAGAGGGTGACCAGCAAGATA
TCTCTGGGCTGGTATCAGAACTATCTGATGATGATGACCGCTTTATATTGGACTACATTCATAATTCAAGGATAAATATC
AACATAAGACAAGTATACTGAAGCTACTTTAGTTATTATTGAAAGTTTGCTCTCCTGCCGCCTCTCGGGCCT--ACACTA
GATGTGCAATTG--TTTGATTAACTGTGTCTGGAGTTTGTTTCTGAAATGTTGCTGGAAGATGAGGTAATTTATTGATCA
GGAGAAGCATTCATCGTCTTTCAAAGGGTAGGCCTTCCATGGACTGGGCATTTTTGATAATTTTGTACCCTTGGCAAGAC
CCCGGTTATCATTAAAAAAACCTCATTAAAAAAACCTGGCTAATGCGATAGACTGTAAAACACTTAATGGCTTACTGCCT
GGTGTGTGAGAAGTTGTTCATCTTGAGTATTCTTTTCCAGAAAATTTACTTTCCAAGATCTCTATATGTTGATTCGTTGA
ACAAAAGTGTACCTTCTGTTGTGCAGATGGACAAGCTATATGTAAAGTGGTCAGATGTATTCTTTTTTTCCAGCATGTAT
TACATTGATTATAGTGTCCTATCAAAGATAGAAATGTCCGTATTATGTTTGGGCACAATTCAAA-TCATGGAGAACAGGA
GAAGTCAGCAATTTGAAAATGTAATCTTCTTATGTTGGCTCTTAGTCTTACCATAGGCCATTCTGTCAATTTTCAGTCTG
TCTGCTTAACTGCCTGCCTTTTCATCCCTTTGTTGATCGATAAAGGCAACTCATTGTCTCCATGGAAAATAAGAAAGGAA
ATTGTATTTGCTTAAACTGGATGTTTTGACAAGGTTGTCAGTCCAAGTCACACTTGTCAAGATGTGTCATCAAGGCTAAT
TGTATGTACTTTGGGTGAAGTGAATATATAGCAAGACGCTGCACACACCATTTCTAGCCTTTCTGGTGGCAAAATACAGA
TAATATTAAGTACTGTAGAACACCTGTTGTAGTCTCTTCACTTACTCCCTCTAAAGAAATATAAGAGCGTTAGGGCGTTT
GAGTGATCTAAACGCTCTTATATTTCTTTACAATGAGAGTAGCAAAGTGCAGATTACATGAAGTAA
>chr3B_1
GGCCGTGTCTTGTGGAGATGGTGCGGGTGATGACTTTGTTGCACGCGTACGGGTTCACCGTGAACGAGAAGTTTCCATTG
TAGTGATCATCGGCTTCGCCGTTGTCCCCCGGGATCTTGATTTTGATCCAGAAGGTGTCCGTCAGGGCGCTGCTCGACTC
GAGTATCAGATTATTCTGTGGATCGACGGTGTGTCCTCTCTGCGATGACCAGAAGTGGCCACCAAAGCCGTCGGTGGCGG
CGAAGGAACCCGTGAAGCGGAAGCGAGGGCGCACGATGAAGAGCTCCACCCGGTACTTAGAAAAGGAGTAGGCTAAGTTC
AGGTTTTTGCTGTCTCCGTTGTAGCAGATCATGTGACTCGGTGGTGGATAGTCCCTCTCGTCGTAGCCGTCG-----TCC
TCGCTGATGTAGTCGGCCATGTCCTGCGGTCTGTAGAACCCCCCATTGTCGTCATCATCATACTC----GCTCCTCCTGC
GGTCGTCGCCGTCATCATCATCGCCGCTGCCGCTCACGATGATGCCATCATTGCCGATGCCATGGAGCCCGCTGCCAACG
TTGTCTCCCCCGACGCCGTCACCGCCGATGCCATGGGAGCCATCGCCGGCATTGTCATCAACCTCTTTCTGGTTGTACTC
GGCAGCAGATTCTTTC---TCTGCCGTTCCTGTTCCTATAGCGGGCTCAGTGGTGCATGCCTGCAGGTCGCACGAGACGG
CCCTCGAGGATGGCCTTTCCGGCGGCCCTCCGGCGGCAGCCATACCGCTCACGCCCTTGCCAAGA-TTGCCGGCGGTAAT
GAAAACCTAGAGCGATCGATCTGGTTGATTA---ACTTCGGTCTCCTGAGAGGCTCAGACAGACCTAATTTATCCATGCC
ATCC--ATCAAACCTGGGCCGGGCCTGGTTCTGTGCACAGTTCCTGGCCCAGTCT---AGGA-GGAGACAGGAACCTGGA
CCGAAACTGGTTCGGCGCACACTATTAACTTCCGTGGGCCAAGACCACCAATCCGAAGGG-AAAAAACAAAGAGGGTACA
GCGAGAACGGCGGCGGCGG------CGC---CACACTTGCCGGCGATGTACGCGGAAACGGAGCCCGGGGCCGCCGCGGA
GCGCACGGCGTTCCGGCGGGCCGAGAAGCAGTACAAGCTCTACAAGCCGCCCAGTCGCAAGGGCAGGTCCAACTCCAGGT
CTCTCTCTCTCCCTTGGCCCTCCGCCATCTCCACGCGGGAACAGCAGAGCAGAGCCCTGACTTTTCGAGCGCTGCAGGGG
CAAGCCAGCCGG------------------CGGTGGCGGCGGCGGGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGC
TTGCTGCCGGAGGAGGCGAGCTGCCCGCCGGGATCCGGAGGTGCGACCGCGCCGGCTTCCACCTGCCCGTCTTCTGCTTC
CTCGACCGGCCAGGTAACTCCACAATT-CTCCCAATATTGCTCTGCTTTCGATACTTATTAGGATTATTCATGATCCAGT
TTGGATTTTTGTTCTTACAATTTACCAAGTCAGGACATTGCATTTAAACAGCAGCAACTTGCAAAATTACTTGCTGCTTC
TAGTTTTGGGTCATCAAATTATTTCTTAAC-------------------------------------------------T
GTTTATTCCAGTGCTTGTGCAATTTTCACATCAGTGCTAACTTTGTTTCACATCATTTAACTGTTTCTCTAGACGCATGT
GCTTCAAGGATCTTAGGTTCCATAACACCTGCAAATACCAGCGCCGAGGCCCGTAGGAATTTCCCTTGACCGAACGCCCA
TTCCACCTTTGTTTCACGACTTTGCCACAACGCCACCTGTATTAAGCTTGGGGAAACCCTATGGTGGTGAAAAACCCAGT
ACCACATGAATGCCTAGTAGTGACGGGCGTAAAAAGCCCATCAGTGACGGACAAGACTCTCGGGGGCGCCCGGAATTGCT
AACATGGCATCCGTGGCGGGCGCTCGCCCGTCACTGGTAGTGCACCAGCAGTGGCGGGTGCCTATCAGTGCCCGCCACAG
AAATTTGATGTAGCTTGAACAAAATGGAAGATATCATCGGTAAATAAAAGCACATCCTGCTTATTAACATCTCGGAAATA
TTCTACCTAATAAAGCAGTGCTAACTTTGTCCCAAACATGAGCGGCAGACGGCAGAGAATGTCAAATTTTCATATGGAAC
TCGTGATTTCCCTTAACCCCTCCTATGTGGT--ATATGCTATGCCTGAACTATTATGTCAGCAAGTTCCTCGCCATGAGT
ATATCTGTATATGTCTATCCAAAAAGGAGTACGAATGGCATCATAACTTTCGAGTA---ATTCGGGTTTTGCTTGCCTAT
TTATGTCAATATTTCAGCCTCCAACACTTGATCGTCATACCTAATACCCATCAATCATTCTAATCTCATTATACTACTGT
TCATTTGTGAAATAGTACTCATACCCTTCGCATAACTC-------TGTAGGATTCTATTTCATCCCTGGTGCTCTATCTA
CCGAGGAACAGTGCTATTGGATCAGGGAAAGCTTGAAAACATTCCCACAGCCTCCTAATAGAACCAACTTGACTGCTACA
TACGGTCCAATTTTTGACTTGCTCATTGCTGCTAAAAACCAAAAGATTTTGGTTGAAGTGGAAAGTTCCAGTGGCAAACC
AAGAGATGAGCAGAATAATGTTGGGGAAAATGCACATCCGGGTAAATTCAATTTTGTGGATGGCTCAGAGATCCAAAAGG
GGGAAAGACCTAAGTCGACCACGGCAGCTGCTCTTGTGCGCAAGCTCCGGCGGTGGAGCACCCTTGGTTTGCAATTTGAT
TGGTCAAAAGTATGTATGTATCCTTTTTATTAAATGTTGGATGTGTCTTTATTTTCATTTTTCTTGAATTTAATTCTTTT
AACTTGTGGTGGTATTAAAATTTGGTGGTACTTTACATATGAATATGAACAAACCAGCAGGCATATTTTTCTTCAATTTT
TTCTGCAATTGTGACAAACAAGCCCAATTCATTATAATTATAGTGTTATTATGACGAATTCATAATTCCATATTACTCCC
TCCGTCCCATAATATAATAACGTTTTTGAAACAACACTAGTGTCAAAAACGTTCTTATATTATGGGAGAGGGAGTAGTAC
TTAAGGAGCTTTGTTTGATTATGATAGTCCTTGC---AAAGCTATTTTTAAGCATGATGATCTCTGGAAACATTATATGC
AACTAATCCCTGTGTGCATACATCACGCGCTAATATCATAATGTAATTTATTATCATACTCGTCCATGAAACTTGATAGC
TGCAATCTTTTGTGCAGTGCTTGCACTTAATTAAAATCATATACTTATTGCACTGTAAGATACGCTTTTGGTTGCAACTG
CATATTAACCATTTCCTGTTTCTGTCAGCGTAACTATGATGTATCGCTTCCACATAACAAGATTCCAGACGACCTTGCTG
CTCTAGCAAAAAAGATGGCTGTTCCAGCAATGCCTTTTGGAGAAGAATTTGCTGCAGAAGCCGCCATAGTGAACTATTAT
GGTCCAAGTATGTAGCTTGTCGCACAC-----TGAATGGCCTAGTA-------------GATAGATGCACCTTGGCAAAT
TGCCTCAAAGTTTCATGCTAGTCTCTCTGTCTGTACTGAAAAAATATGCTTTGACTTATGTAGGTGACATGCTTGGTGGG
CATGTTGATGACATGGAAGCAGATTGGACAAAACCTATTGTAAGCATAAGGTACTACGTCTCAGTTGCTTTCTTGTACGA
TTATCTTAATCTGAATGCAGTGTCTTTAACATTTATTGGTTTGCTTAGTTTGGGTTGCAAGTGCATTTTTCTTCTTGGAG
GGAAGACGAGGGATGAAGCTCCAACACCAATGTTCCTGCGAAGTGGTGATATTGTATTGATGGCTGGGGAAGCCCGAGAA
AGATTCCATGGTAGTTTATTTATTTTAAATGAAAAAAAAATTGG--CTTAATAAGAAAGTTAACTGAAAAATACCATGTA
TCACTAGCTTTCTAGAATAACTTATGGTCTCTATTCTACAGGTGTTCCACGGATCTTCACAGAGGGTGACCAGCAAGATA
TCTCTGGGCTGGTATCAGAACTATCTGATGATGATGACCGCTTTATCTTGGATTACATTCATAATTCAAGGATAAATATT
AACATAAGACAAGTGTACTGAAGCTACTTTAGTTATTACTGAAAGTTTGCACACCTGCCGCCTCCCAGGGGACCACAGTA
GATGTGCAATTTGTTTTTATTAACTGCATCTGGAGTTTG-TTCTGAAATGTTGCTGGAAGATGAGGTAACTTATTGACCA
GGAGAAGCAATCATGTTCCTTCAAAGGGTAGGCCTCCAATAGACAGGGCATTTTTGATAATTTCATACCCTCAGCGAGAC
CTCAGTTAT--------------CATAAAAAGAATCCTGCTAATGCGACAGATTGTAAATCACTTAATGGCTTAATGCCT
GATGTATGAGAAGTTGTTCATCTTGTGTACTCTTTTCCAGAAAATTTACTTGCCAAGATCTCCGTCTGTTGATTCTTTGA
ACAAAAACGTACCTTCTGCTGTGCAGATGGACAAGC------TAAAATGGTCAGATGTGTTCATATTTTTCAGCCTGTAA
TACATTGAATACAGTGTCCTATCAAAGATAGAAATGTCTGTATCATGTTTGGGCACAATTCAAAGTCATGGAGAACAGGA
GAAGTCAGCACTTTGAAAATGTAATCTTCTTGTGTTGGCCCTTAGTATTACCATAGATCATTCTGTCAATATTCAGTC-G
TCTCCTTAACTGCCTTCCTTTTCGTCCCTTTGTCGATCGATAATGGCAACTCATTGTCTCCATGGAAAATAAGAAAGAAA
AT-GTATTTGCTCAAACTGGATGTTTTGACACGGTTGTCGGTCCAAATCACACTAGTAAAGATGTTTCATCAAGGCTAAT
TATATGTATTTGGGGTGAAGTGAATATATAGCAAGAAGCTGTGTACACCATTTCTAGCCTTTCTGGTGGCAAAATGCAGA
TAATATTAAGTAGAACACC--------TGTAGTCTTTTCACTTA------------------------------------
------------------------------------------------------------------
>chr3A_71
--------------------------------------------------------------------------------
--------------------GTTGTCCCCCGGGATCTTGATTTTGACCCAGAAGGTGTCCGTCAGGGCGCTCCTCGACTC
GAGTATCAGATTGTTCTGTGGATCGACGATGTCTCCTCTTTGCGAGGACCAGATGTGGCAACCAAAGCCGTCGGTGGCGG
CAAAGGACCCCGTGAAGTGGAAACGAGGGCGCACGGTGAAGAGCTCCACCCGGTACTTAGAAAAGGAGTAGGCTAAGTTC
AGGTTTTTGCTGTCTCCGTTGTAGTCGATCATGTGACCGGGTGGTGGATAGTCCCTCTCGTCACAGCTATCGCCGTCTCC
TCGCTGATGTAGTTGGCCATGTCCTGCGGTCTGTAGAACCCCCCATTGTCGACATCATCATACTCGCTAGCTGCTCCTGC
GGTCGTCGTCGTCATCATCATCGCCGCTGTCGTTCACGATGACGCCGTCATTGCCGATGCGATGGAGCCCGCTTCGATCA
TTGTCGCCCCCGACGCCTTCATCGCCGATGCCATGGTACCCATCGCCGGCATTGTCGTCAACCTCTTTCTGGTTGAACTC
GGCAGCAGAGTCTTTCGTCTCTGCCGTTCCTGTTCCGATAGCGGGCTCAGTGGTGCATGTCTGCAGGTCGCCCAAGATGG
CCCTCGGGGATGGTCTTTCCGGCGGCCCTCCGGCGGCAGCCATACCGCGCACGCCCTTGCCAAGAGTCGCCGGCGGTGAT
GAAAACCTAGAGCGATCGATCTGGTTGATTAACTACTTCGGTCTCCTGAGACGGACCT-----TCTAATTTATCCACGTC
AGCC--ATCAAACCTGGGCCGGGCCTGGTTCTGTGTACAGTTCCTGGCCCAGTCG---AGGAGGGAGACACAAACCTGGA
CCGAAACTGGTTCGGCGCA-----TTAACTTCCCTGGACCAAGACCACCGTCCGAAGGGG-AAAAAC--GAGAGAATACA
GCGAGAACGGCGGCGGCGGCGGCGGCGC---CACACTTGCCGGCGATGTACGCGGAAACGGAGCCCGGCGGCGCCGCGGA
GCGCACGGCGTTCCGGCGGGCCGAGAAGCAGTACAAGCTCTACAAGCCACCCAGTCGCAAGGGCAGGTCGAAATCCAGGT
CTCTCTCTCTCCCTGTCT-CTCTGCCATCTCTGTGCGGAAACAGCATAGCAGAACCCTGACTTTTCAAGCGCTACAGGGG
CAAGCAAGCCGGTGGTGGTGGGTT---------TGGCGGCGGCGGGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGC
TTGCTGCCGGAGAAGGCGAGCTGCCCGCCGGGATCCGGAGGTGCGACCGCGCCGGCTTCCACCTGCCCGTGTTCTGCTTC
CTCGACCGGCCGGGTAACTCCACAATTTCTCCCAATATTGCTTTGTTTTCGATACTTAC---GATTATTCTTGATCCAGT
TTGGATTTCTGTTCTTACAAATTTGCAAGTCAGGACATTGCATTTGAACAGCGGCAACTTACAAAATTTCTTCCTGATTC
TGGTTTTGGGTCATAAAATTATTTCTTACTCCCTCCGTCCCGTAATATAACAACTATATTATGGGACGGAGGGAGTAATT
GTTTATTCCAGTGCTTGTGCAATTTTCACATTAA----------------------------------------------
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--------------------------------------------------------------------------------
------------------TGCTAACTTTGTCCCAAACATGAG-------CGGCAGAGAATGTCAAATTTTCATATGGAAC
TCATGATTTCCCTTAACCCCTCCTATGTGGAACATATGCTATGCCTGAACTATTATGTCAGCAAGTTCTTCATCATGAGT
ATATCTGTATATGTGTATCCAAAAAGGAGGACGAATGGCATCATAACTTTTGAGTA---ATTAGGGTTTTGCTTGCCTAT
TTATGTCAACATTTCAGGTTCCAACACTTGATCGTCACACCTAATATCCATCAATCATCGTAATCTCATTATAAT---GT
TCGTTTGTGAAATAGTACTGATAATACCCTTCGCGCCTCAATTTTTGTAGGATTCTATTTCATCCCTGGTGCTCTATCAA
CTGAGGAACAATGCTATTGGATCAGGGAAAGCTTGAAAACATTCCCACAGCCTCCTAATAGAACTAACTTGACTGCTACA
TACGGTCCAATTTCTGACTTGTTCATCGCTGCTAAAAACCAAAAGATTTTGGTTGAAGTGCAAAGTTCCAATGGCCAAGA
AAGAATTGAGCAGAATAATGTTGGGGAAAATGCACATCCGGGTAAATTCAAATTTGTGGATGGCTCAGAGATCCAAAAGG
AGGAAAGACCTAAGTCGACCATGGCAGCTGCTCTTGTGCGCAAGCTCCGG---TGGAGCACCCTTGGCTTGCAATTTGAT
TGGTCAAAAGTATGTATGTACAATGA--------------ATGTGTCTTTATTTTCATTTTTCTTGAATTTAATTCTTTT
AGCTTGTGATGGTATTAAAATTTGAT---GCTTTACATATGAATATGAATAAACCAGCAGGCATAATTTTCTTCAAATTT
TTCTGCAGTTGTGACAAACAAGCCCAATTCATTATAATCATATTATGATGATGATGAATTCATAATTCCATGTTAGCGCA
TAACAAG-TTT---------------------------------------------------------------TATTAC
TTAAGGAGCTTTGTTTGCTTATGATAGTTCTTCCTTGAAAGCTATTTTTAAGCATGATGATCTCTGAAATCATTAT--GC
AACTAATCCCAGTGTGCATACATCATACGCTAATATCATGATGTAACTTATTCTCGTACTCAGCCATGAAACTTGATAGC
TGCAATCTCTTGCGCGGTGCTCGCAGTTAATTAAAATCATGTACTTATTGCACTGTAAGATACGCTTTTGGTCGCAACTG
CATATTAACCAGTTCCTGTTTCTGTCAGCGTAACTATGATGTATCGCTTCCACACAACAAGATTCCAGATGACCTTGCTA
CTCTAGCAAAAAAGATGGCTGTTCCAGCAATGCCTTCTGGAGAAGAATTCACTGCAGAAGCGGCCATCGTTAACTATTAT
GGTCCAAGTATGTAGCTTGTCTTTTCAAACAGTGAATAACCTAACCTCGTAGATATACTGAT--ATACACCATGGCACAT
TACCTCGAAGTTGCATGCTTGCCTCTCTGTCCATAC---AACAATAAGCTTTGACTTCTGTAGGCGACATGCTTGGTGGC
CATGTTGATGACATGGAAGCAGATTGGACAAAACCTATTGTGAGCATAAGGTACTACGGTTCAG----TTGCTTATATAA
TGATCTTCATTTGAGTGTAGTCTCTTACTTTTTTGTTGTT----TTAGTTTGGGTTGCAAGTGTATTTTTCTGCTTGGAG
GGAAGACAAGGGATGAAGCTCCAACGCCAATGTTCCTGCGAAGTGGTGATATTGTACTGATGGCTGGGGAAGCACGAGAG
CGCTTCCATGGTAATTTATTTATTTTTAATGGGAAAAAT-TTATGTCTTAATAAGAAAGTAAACTGAAA--TACCATGGA
TCATCAGCTTTGTAGAATAACCCATGGCCTCTATTCTACAGGTGTCCCACGGATCTTCACAGAGGGTGACCAGCAAGATA
TCTCTGGGCTGGTATCAGAACTATCTGATGATGATGACCGCTTTATATTGGACTACATTCATAATTCAAGGATAAATATC
AACATAAGACAAGTATACTGAAGCTACTTTAGTTATTATTGAAAGTTTGCTCTCCTGCTGCCTCTCGGGCCT--ACACTA
GATGAGCAATTG--TTTGATTAACTGTGTCTGGAGTTTGTTTCTGAAATGTTGCTGGAAGATGGGGTAATTTATTGATCG
GGGGAAGCGTTCATCTTCTTTCAAAGGGTAGGCCTTCCATGGACAGGGCATTTTTGATAGTTTCGTACCCTCAGCAAGAC
CCCAGTTAT--------------CATTAAAAAAATCCAGCTAATGCGAGAGAATGTAAATCACTTAATGGCTTACTGCCT
GATGTGTGAGAAGTTGTTCATCTTGAGTATTCTTTTCCAGGAAATTTACTTGCCAATATCTCTATCTGTTGATTCGTTGA
ACAAAAACGTACCTTCTGCAGTGCAGATGGACAAGCTACATGTAAATTGGTCAGATGGGTTCATATTTTTTTCAGC----
-----------CAGTGTCCTATCAAATATAGAA-----------ATGTTTGGGCACAATTCAAAGTCAC--------GGA
GAAGTCAGCAATTTGAC-ATGTGATCTTCTTGTGTTGGCTCTTAGTCTTACCATAGGTCATTATGTCAATATTCAGTC-G
TCTCCTTAACTGCCTTCGTTTTCGTCCCTTTGTCGATCGATAATGGCAACTCATTGTCTCCATGGAAAATAAGAAATAAA
ATTGTATTTGCTTAAACTGGATGTTTTGACAAGGTTGT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>SNPs
-----------------------S----------------------------------------------------S-S-
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------------------------S-----------------------S----S----------------------
-------S------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
-------------------------------------S-------------------S-----------S----------
------------S----S-----S------------SS------------------------------------------
----------S--------------------------S------S----S------------------------------
--------S------------------------------------------S-----S----------------------
---SS------S-----SSSS------------------S------------S---------------------------
----SS---------------------------------------S---------SSS---S------------------
------------------------------------------------------------S-------------------
---------------------------SSSS-------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
---------------------S--SSSSSS---S----------------------------------------------
-----------S--------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------------------S---------------------S--------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------S-S-------S----SSS----------S----S-----
----------------------------------------------SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S----------S----S--S-------------S-----------------------------------S--S--
-----------S---S-S---------------------------S-----S----------------------------
------SS------------------------------------------------------------------------
---------------------S---------------S--SSSSS--------------------------S--------
-S-S------------------------S-------S------S------------------------------------
-----------------------------------------------------S---------S---------S------
--------------------------------------------------------------------------------
-------------------S--------------------------------S--------S------------------
--------------SS-SSSSSS-------------------S-------------------------------------
----------------S---S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------S------------------S-------SS-------
---S-----SSSSSSSSSSSSSS-----------S-SS----------S---S------S--------------------
-S-------------------------------------------------S-------------S--------------
------SS----------S-------------------S-------S-----------S---S-S----S----S----S
--------S--S--------------------------S----S------------------------------------
-------------------------------S-------------------------S------------S-------S-
---S-----------S-------S---------S---------S---------------------------------S--
---------------------------------------S------S-------S--S-------S--------------
-S------S--S------------------------S----SSS-------------------------------S----
------------SSSS-SSSSSSSSSS--------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_936
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ACAGTTCCTAGCCCAGTCGA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3540
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CGTTCCAGCAATGCCTTCTG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CAGTTCCTAGCCCAGTCGAG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3697
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCTTCCCTCTCTGTCCATACTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_3058
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
TTCTGCAGTTGCGACGAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_4473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GGCAAGAC
CCCGGTTATCAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
