>input_sequence_35910
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-------------ATGGACACGGAGAACTCCTGGATTAGGAGGACCAAGTTTTCACACACCGTCTACACGAGGGTTGGTT
CCCATGGGGTGCATGTGGCTCCTCTTGGGAGGGATGTGGAGCAGAAACTTCAGAGGTTTGTGAGCATGGGTAAGTGTGTG
ACGATGCCCATTGATCGAGGCAATGATGAAACAGTGGCCGCGCTGAAGCATACTGCTAGTCTGCCATCACTCCGATCCTC
ACTCCAGCCTAATGAGAAAAAGGCCAGCAAGCAGAAGATGAGTTTAGAGATTCCTTTGAGCCCTCCTGCAAAGTCTGAGA
AATCCAAGGCCCCAAGGGCGAGGAGCCTGGTCAAGAGCCCAAGCTCGATGATGCTCCTTAGCTACTTAAATAATGCACAC
ACAAGTCAGGGCTCCAACCTTCGTCAAAAGGCTAACGGATCTCATCACAAGCTGAGATCCAAGTCCCCTCTTCCCAGCGT
AGTGCCTTCAGATACATTCAGGGAAGCGAGGGCCAGCAGTCAGAGGTTCACAAGCCCTCCCCCGAAGCGTGTGGGATCTG
ATAAAAGCGTATATGGCAAATCGCTGGGCAGGGAAGGGTGTGATATGGGTCCAAGCCCTGATTGGTGTTCGACTCCGGTG
GTCTCTGATAAGCACAATTCTCAGAAGGATAGCTCATGGACCAAAAGATACTTTGACAATGGGGGAAGGAGGAGGGTTAG
TGCAGTAGAGACTGTGAGGAGCCGTACAGTTAGCATGGCTCAAGCGGTGCAATCGACAGTTGATTGGGAACTTGATCCAA
CCAAGCTGCTTGTTGGCCATAGGTTTGCTTCTGGGGCACATAGCCGGCTATACAAAGGACTTTACGATGATAAGCCGGTT
GCCCTTAAATTTATCCGCCGGCCTAAGCATGACACTGGTGGGATAATAGCTGCAAAGCTTGACAAACAATATAACACTGA
GGTCAATGCATTGTCTCATCTGCATCATAAGAATGTGATCAAGGTATAATTACATTCAGACTTTTCAAGATGTACTGTTT
TTCTTATTATATCTCTGGGCATAGATAGTGCAGAGTGTTTGGTTTGATTCTTTTTCCTTAGCCTTATAATGGTCATGCAA
TCTAATAAAATCACAT-GGCACGTTGATGTTCCTTTTTTTGCAATAGAAAAATACTTTGAGGATATGTCTTAGTTAAACC
TTTTGTTATAATCAACTCATAATTGTCTGCCAACTTGTTATACACCTTCAGAAGAAGAAGAAGATTAAGCTGATGTTATC
TTAGGATAAGCAATGTTGCTATTTTCAA--TGTGCCGTGAAGTGCTCAAAATATCCATCAATAAGTTTTATGTAT-TATG
AGCTAACCAGAGTCAATAATACCAGTGAATCATTCCTTGTTATTGATTAACCTTG------------------------T
CTGATTTCATTTTGTTGGTAACTTCTTAATGCAGCTTGTAGCAGCTCATAGAGTTGGACCGGTTTATTACATAATTACGG
AGCTTCTTCCTGGAGGTTCCTTGAGGTCATACCTGCACAACCCAGAGCACCACCCCCTCCCTCTGGAGAGGACCATATCC
ATCGCTCTGGAGATTGCCCGAGGGTTGGAGTACATCCACTCTCAGGGAGTTGTCCACCGCGACATTAAGCCCGAGAACAT
CCTTTTTGATGACAAGTTCGAGGTGAAGATTGCTGATTTTGGCATTGCCTGTGAGGAGACGTTATGTGATTTGCTAGTGG
ACGATGAGGGCACGTACCGCTGGATGGCCCCTGAGATGCTAAAGCGCAAGCCGTACAACCGGAAGGTGGATGTATATAGC
TTTGGACTGCTGCTGTGGGAGATGGTGACCGGAAGAATTCCTTTCGAGAACCTGTCCCCAGTCCAGGTGGCTTATGCCGT
TGCGAATAACGTAAGAGTTTAATTATGAGTTTGAGTTTGCCTTCTTTGCAGAACGTAATCTGAAGATGTACGCATTCTCT
CCTTGACTAAATCCTTTTGGTTTTGTTTCAGAACAAGAAAGCGATGGAGCCTGAAGATTATTGCCCGGCAGTAGTGAGAC
CCCTGATTGAGCAGTGCTGCGCATTGCAGCCCGAGAAGAGGCCAGATTTCTGGCAGATTGTGAAAACCCTGGAGAAAATC
CAGTCTGTTATGTCGCAGGGCGGCCGCCTGGACGCGCTGAGGAGCAGTGACCACAAGAAGGGGCTTAAGCACTGGATTCA
GAAACTGAAACCATCACACGGCGCCTGA----------------------------------------------------
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>chr3B_1_TraesCS3B01G158300
ACCCGTCAGGTTCTTGATGCCGTTTGGCGTGCAAATCTGTGCGAGGCCCGCTTTTGCTTTCGGATCACTGCCGTTTGGAT
TTGTCCAGTTTTTCC------------CTTCTTTTCCCTTATTACTTTTTGTCTAGTGTCAGAAAAGTTCAGGTAGTG-T
TGCCGAGTCTGAATTTCATCGTCGGATGTTCTCCGGTCGTGGTTTGGGAAGTCATACATAATACTGGCGGCGTGTTGGGA
CTAATCT----------------------TAGAT-------TGCGCGTCTTTATATTTCTCCGCGAGAATGGTTGCCCCA
TAATTTGACGTCTCGCCGCGTGAAAAGTCGATGCCTTCGCAGGAAAATCAAATAGTCTGGATGATGCTTGTTCGGGTCAT
AATTTTTACTCCTGCGGTTTCTCTAGTTTTATTTTTTTGAGGGGTTTGCAGTTTCTCTAGTGATTCACAGT-TGTCCAAT
TGTCAAAAAACCGCGTTATTTCAACTGCTCCATGCCTATATTCCGCGCTAATTCCATGAGAAAAAGTCAAATCATTATTA
TAATTAA-------ATTCAACTATACATGTCCGCCGATAAGATAAATAGATGATGATCAATATTGTTTTGTTT-TTATTC
GCTGAACGGGACAATTTTATATAAGCAATAATTGCCCGTATAATACTACCGGTTGCGCACCAAGTTCAGCTTACAATCTT
TTGTTTCCTATTGTTGTATTTCAGGATACTTGAGAAG-CCAGGCTGCTGCGGGTTTTTTTTTTCTTCAACAAGTTTCAGG
GATCTGTTTGACACTGAACAGACCCTTGACCTCTTTGTGCAACACTCATCTTCTGTACAACTTGCGGCAAGAATTTGGCA
GCAAATGGGTCGAGGAATCACAGTGATTCCTGGCCTAAGGTCTCTCGGACGCGTTTCTTGTGACTTCTGTTCGAAATTTC
ACTTCAACATGTGGTTCATGCTAATCCAAGCTTCCAAAGTTGGAATCTGATCACTTGTGACAGCGTTTCTCCGTCTCCTC
AGTTCCA-GCAATATGGACACGGAGAACTCCTGGATTAGGAGGACCAAGTTTTCACACACCGTCTACACGAGGGTTGGTT
CCCATGGGGTGCATGTGGCTCCTCTTGGGAGGGATGTGGAGCAGAAACTTCAGAGGTTTGTGAGCATGGGTAAGTGTGTG
ACGATGCCCATTGATCGAGGCAATGATGAAACAGTGGCCGCGCTGAAGCATACTGCTAGTCTGCCATCACTCCGATCCTC
ACTCCAGCCTAATGAGAAAAAGGCCAGCAAGCAGAAGATGAGTTTAGAGATTCCTTTGAGCCCTCCTGCAAAGTCTGAGA
AATCCAAGGCCCCAAGGGCGAGGAGCCTGGTCAAGAGCCCAAGCTCGATGATGCTCCTTAGCTACTTAAATAATGCACAC
ACAAGTCAGGGCTCCAACCTTCGTCAAAAGGCTAACGGATCTCATCACAAGCTGAGATCCAAGTCCCCTCTTCCCAGCGT
AGTGCCTTCAGATACATTCAGGGAAGCGAGGGCCAGCAGTCAGAGGTTCACAAGCCCTCCCCCGAAGCGTGTGGGATCTG
ATAAAAGCGTATATGGCAAATCGCTGGGCAGGGAAGGGTGTGATATGGGTCCAAGCCCTGATTGGTGTTCGACTCCGGTG
GTCTCTGATAAGCACAATTCTCAGAAGGATAGCTCATGGACCAAAAGATACTTTGACAATGGGGGAAGGAGGAGGGTTAG
TGCAGTAGAGACTGTGAGGAGCCGTACAGTTAGCATGGCTCAAGCGGTGCAATCGACAGTTGATTGGGAACTTGATCCAA
CCAAGCTGCTTGTTGGCCATAGGTTTGCTTCTGGGGCACATAGCCGGCTATACAAAGGACTTTACGATGATAAGCCGGTT
GCCCTTAAATTTATCCGCCGGCCTAAGCATGACACTGGTGGGATAATAGCTGCAAAGCTTGACAAACAATATAACACTGA
GGTCAATGCATTGTCTCATCTGCATCATAAGAATGTGATCAAGGTATAATTACATTCAGACTTTTCAAGATGTACTGTTT
TTCTTATTATATCTCTGGGCATAGATAGTGCAGAGTGTTTGGTTTGATTCTTTTTCCTTAGCCTTATAATGGTCATGCAA
TCTAATAAAATCACAT-GGCACGTTGATGTTCCTTTTTTTGCAATAGAAAAATACTTTGAGGATATGTCTTAGTTAAACC
TTTTGTTATAATCAACTCATAATTGTCTGCCAACTTGTTATACACCTTCAGAAGAAGAAGAAGATTAAGCTGATGTTATC
TTAGGATAAGCAATGTTGCTATTTTCAA--TGTGCCGTGAAGTGCTCAAAATATCCATCAATAAGTTTTATGTAT-TATG
AGCTAACCAGAGTCAATAATACCAGTGAATCATTCCTTGTTATTGATTAACCTTG------------------------T
CTGATTTCATTTTGTTGGTAACTTCTTAATGCAGCTTGTAGCAGCTCATAGAGTTGGACCGGTTTATTACATAATTACGG
AGCTTCTTCCTGGAGGTTCCTTGAGGTCATACCTGCACAACCCAGAGCACCACCCCCTCCCTCTGGAGAGGACCATATCC
ATCGCTCTGGAGATTGCCCGAGGGTTGGAGTACATCCACTCTCAGGGAGTTGTCCACCGCGACATTAAGCCCGAGAACAT
CCTTTTTGATGACAAGTTCGAGGTGAAGATTGCTGATTTTGGCATTGCCTGTGAGGAGACGTTATGTGATTTGCTAGTGG
ACGATGAGGGCACGTACCGCTGGATGGCCCCTGAGATGCTAAAGCGCAAGCCGTACAACCGGAAGGTGGATGTATATAGC
TTTGGACTGCTGCTGTGGGAGATGGTGACCGGAAGAATTCCTTTCGAGAACCTGTCCCCAGTCCAGGTGGCTTATGCCGT
TGCGAATAACGTAAGAGTTTAATTATGAGTTTGAGTTTGCCTTCTTTGCAGAACGTAATCTGAAGATGTACGCATTCTCT
CCTTGACTAAATCCTTTTGGTTTTGTTTCAGAACAAGAAAGCGATGGAGCCTGAAGATTATTGCCCGGCAGTAGTGAGAC
CCCTGATTGAGCAGTGCTGCGCATTGCAGCCCGAGAAGAGGCCAGATTTCTGGCAGATTGTGAAAACCCTGGAGAAAATC
CAGTCTGTTATGTCGCAGGGCGGCCGCCTGGACGCGCTGAGGAGCAGTGACCACAAGAAGGGGCTTAAGCACTGGATTCA
GAAACTGAAACCATCACACGGCGCCTGAGCTCGGTCTTCTAGCATCGTTTCGACCGTTATTTTATCCGGTTGGGTATGCT
CCCCTAGTCTAG-CCTAGCGTAAGATGATA--AGCTTTTCGATTTCGTGTTTAAAATTCTAGGACGGATGCGGATGTTTA
TTAGGTGATCTACAATTAGCTTTTATTACATTTATCATCAGTAGCTGTATGCCATATATCAAACTTATA-----TATGTT
ATCTCATTCGCTCTTGCTCTTGCTCCTGTCCCTGTGTTAAGTTCAGTCGCGGTGCAGATTATTCATATTGGTCGAAATCG
TCGATAGTAGATAGTCATCATTATTAGCCTGCTCT-------------CCTCGTTTAGATAGAGATTGCCGAGGAAAAGC
CGCCGACTCGCCGTCATTAGCATCATGGGGAAGGAAGGGCGTGGTTAATTAACTCAATTATTGGGTCCTTTGTTTGTCAG
CATGCCACTCTGAATGGTCATGGTGCTTTTGACCTGTGAGACGGCCACCCCGGTTGCTTCCCTTTTTATTCTGTTGTGGG
ATGACG-CCCGGGTTCGAGATATGTTTGTTTGTACTGCTGCATTTCAGTGATATTTTGTTGTTGCGAGATGACGGCTCGG
TTT-GGATATGTTTGTTTTACTGCTGCATTTCAGCGATATTTTGTTGTTGCGGGATGACGACTCGGTTTTATTTCTGTGA
TATTTTGTTGTTGCAACATGACGGCTCGGTTTGGATATACTCCCTCCGTCCTAAAATTTTTGTCTTAGATTTGCCTAGGC
AAACTGAAACGGGCGGACGATGGGACAGGACACAAAGAAGATGGCTGCCCCCTGCTCTGGCGATCCCGTCGCCTGCGTCG
GAGCGCTCCCGCCGCCGGCCGCCCTTTCCGCCCCCTTCGGCGCGGGCCTCGTTCCGGCGGATGTGTCGCCCCTCGCCGCG
CCGGACGCCCCTTCGATCGCGCCCCCCGCGCCGCGGTTCCGCTGGGCGGACTGTGCCGATGACCCCCCTTTCCTGCTCCC
CGCAGCTCCCT
>chr3D_1
ACCCGTCAGGTTCTTGATGCCGTCA-GCGTGCAAATGTGTGCGAGGTCCGCGTTTGCTTTCGGATCATTGCCTTTTGGAT
TTGTCCAGTTTTTCC------------CTTGCTC-------------TTTGTCGAGTGCCAGAAAAGTTCAGGTAGTG-T
TGCCGAGTCTGAATTTCATCGTCGGATGTTCTCCGGTCGTGGTTTGGGAAGT----CATAATACTGGCGGCGTGTTGGGA
CTAATCT----------------------TAGATCTTGCTTTGCGCGTCTCTATTTTTCTTCGCGAGAATTGTTGCCCCA
TAATTTGGCTTCTCGTTGCGTGAAAAGTCGATGTCTTCACAGGAAAATCAAATGGTCTGGATGGTGCTTGTTCGGGTCAT
AATTTTTACTCTGG----------------------------------CAGTTTCTGTAATGATTCATAGTATGTCCAAT
TGTCAGAAAACCGCGTTATCTGAACTGCTCCATGCCTGTATTCCA--CTAATTGCATGAGAAGAAGTCAAATCATTATTT
TATAATAATTCAAGTATTCAA------------CCGATA-------------ATGATATATATTGTTTTGTTT-TTATTC
GCTGAACGAGACA-TTTTATATAAGCAATAATTGCCCGTATAATACTACCGGTTGCGCACCAAGTTCAGCTCACAGTCTT
TTCTTTCCTATTGTTGTATTTCAGGATACTTGAGAAG-CCAGGCTGCTGC-GGTTTTTTTTTTCTTCAACAAGTTTCAGG
GATCTGTTTGAGACTGAACAGACCCTTGACCTCTTTGTGCAACACTCATCTTCTGTACAACTTGTGGCAAGAATTTGGCA
GCAAATGGGTCGAGGAATCACAGCGATTCCTGGCCTAAGGTCTCTCGGACGCGTTTCTTGTGACTTCTGTTCGAAATTTC
ACTTCAACATGTGGTTCATGCTAATCCAAGCTTCGAAAGTTGGAATCTGATCACTTGTGACAGCGTTTCTCCGTCTCCTC
AGTTCCA-GCAATATGGACACGGAGAACTCCTGGGTTAGGAGGACTAAGTTTTCGCACACCGTCTACACAAGGGTTGCTT
CCCATGGGGTGCATGTGGCTCCTCTTGGCAGAGATGTGGAGCAGAGACTTCAGAGATTTGTGAGTATGGGTAAGTCTGTG
ACGATGCCCATTGATCGAGGCAATGATGAAAGAGTGGCTGCGCTGAAGCATACTGCTAGTCTGCCATCACTCCGATCCTC
ACTCCAGCCTAATGAGAAAAAGGCCAGCAAGCAGAAGATGAGTTTGGAGATTCCTTTGAGCCCTCCGGCAAAGTCTGAGA
AATCCAAGGCCCCAAGGGCGAGGAGCCTGGTCAAGAGCCCAAGCTCGATGATGCTCCTTAGCTACTTAAATAATGCACAC
ACAAGTCAGGGCTCCAACCTTCGTCAAAAGGCTAATGGATCTCATCACAAGCTGAGATCCAAGTCCCCTCTTCCCAGCGT
AGTGCCTTCAGATACATTCAGGGAAGCGAGGGCCAGCAGTCAGAGGTTCACAAGCCCTCCCCCGAAGCGTGTGGGATCTG
ATAAAAGTGTCTATGGCAAATCGCTGGGCAGGGAAGGGTGTGATATGGGTCCAAGCCCTGATTGGTGTTCGACTCCGGTG
GTCTCTGATAAGCACAATTCTCAGAAGGATAGCTCATGGACCAGAAGATACTTTGACAATGGGGGAAGGAGGAGGGTTAG
TGCAGTAGAGACTGTGAGGAGCCGTACAGTTAGCATGGCTCAAGCGGTGCAATCGACAGTTGATTGGGAACTTGATCCAA
CCAAGCTGCTTGTTGGCCATAGGTTTGCTTCTGGGGCACATAGTAGGCTATACAGAGGACTTTACGATGATAAGCCGGTT
GCCCTTAAATTTATCCGCCGGCCTAAGAATGACGCTGGTGGGATAATAGCTGCAAAGCTTGACAAACAATATAACACTGA
GGTCAATGCATTGTCTCATCTGCATCATAAGCATGTGATCAAGGTATAATTACATTCAGACTTTTCAAGATGTATTGTTT
TTCTTATTTTATCTCTGGGCATAGATAGTGCAGAGTGTTTGGTTTGATTTTTTT--CTTAGCCTTATAATGGTCATGCAA
TCTAATAAAATCACATGGGCACGTTGATGTTCCTTTTTTTGCAATAGAAAAATACTTTGAGGATATATCTTAGTTGAACT
TTTTGTTATAATCAACTCATAATTGTCTGTCAACTTGTTATACACCTTCAGAAGAAGAAA---ATTAAGTTGATGTTATC
TTAGGATAAGCACCGTTGCTATTTTCATTGTGCGCCGTGAAGTGCTCAAAATATTCATCAATAAGTTTATTTATTATATG
AGCTGACCAGAGTCCATAATATTAGTGAATCATGCCTCGTTATTGATTAACCTTGTCTCATTACATTTTGTTGGTAACTT
CTGATTTCATTTTGTTGGTAACTTCTTAATTCAGCTTGTAGCAGCTCATAGAGTTGGACCGGTTTATTACATTATTACGG
AGCTTCTTCCTGGAGGTTCCTTGAGGTCATACCTGCACAACCCAGAGCACTGCCCCCTCCCTCTGGAGAGGACCATATCC
ATCGCTCTGGAGATTGCCCGAGGGTTGGAGTACATCCACTCTCAGGGAGTTGTCCACCGCGACATTAAGCCGGAGAACAT
CCTTTTTGATGAGAAGTTCGAGGTGAAGATTGCTGATTTCGGCATTGCCTGTGAGGAGACGTTATGTGATCTGCTAGTGG
ACGATGAGGGCACGTACCGCTGGATGGCCCCTGAGATGCTAAAGCGCAAGCCGTACAACCGGAAGGTGGATGTATATAGC
TTTGGACTGCTGCTGTGGGAGATGGTGACCGGAAGAATTCCTTTCGAGAACCTCTCCCCGGTCCAGGTGGCTTATGCCGT
CGCGAATAACGTAAGAGTTTAGTTACGAGTTTGAGTTTGCCTTCTTTGCAGAACGTAATCTGAAGATGTACGTGTTCTCT
CCTTGACTAAATCC-TTTGGTTTTGTTTCAGAACAAGAAAGCGATGGAACCTGAAGATTATTGCCCGGCAGCAGTGAGAC
CCCTGATTGAGCAGTGCTGCGCATTGCAGCCCGAGAAGAGGCCAGATTTCTGGCAGATCGTGAAAACCCTGGAGAAGATC
CAGTCTGTTATGTCGCAGGGCGGCTGCCTGGACGCGCTGAGGAGCAGTGACCACAAGAAGGGGCTTAAGCACTGGATTCA
GAAACTGAAACCATCACACGGCGCCTGAGCTCAGCCTTCTAGCATCGTTTCGACCGTTATTTTATCCGGTTGGGTATGCT
CCCCTAGTCTAGGCCTAGCGTAAGATGATA--AGCTTTTCGATTTCGTGTTTAAAATTCTAGTATGGATGCGGATGTTTA
TTAGGTGATCTACAATTAGTTTTTATTG-------CATTAGTAGCTGTATGCCACATATCAAACTTATA-----T--GTT
ATCTCGTTCGCTCTTACTCCTTGTCCCTGTCTGC---TAAGCTCAGTCGCAGTGCAGATTATTCATATTGGTCGAAATCG
TCGATAGAAGTTAGCCATGATTATTATCCTGCTCTTATTATAGAAGTCCCTCATCTAGATAGAGGTTGCCGAGGAAAGCC
CGCTGACTGGCCAGCATTAGCATCATGGAT----TAGGGCGTGGTTAATTAACGCAATTATTGGCACCTTTGTTCGTCAG
CATGCCATTCTGACTCGTCATGGTGCTTTTGACCTGTTAGACGGCTACCCCGGTTG-----CTTTTTATTCTGTTGCGGG
ATGACGGCCCGGATTCGGGATATGTTTGTTT-TACTGCTGCATTTCAGTGATATTTTGTTGTTGCGAGATGACGGCTCGG
TTTCGGATATGTTTGTTTTACTGCTGCATTTCTGTGATATTTTGTTGTTGCGGGATGACGGATCGGTTT-----------
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>chr3A_9
--------GGTTTTCGATGCCGTTA-CTGTGCAAATCTGTGCGAGGCCTGCGTCTGCTTTCGGATCATTGCCTTTTGGAT
TTCTCCGGTTTTTTTTGCCTAGATGAACTTCTTTTGCCTACCCTCCATTGTCGAGTC----GAAAAGTTCAGGTGCTGTT
TGCCGAGTCTGAACTTATCCTGA-GATGTTCTCCGGTCGTGGTTTGGGAAGT----CATAATACCGGCGGGGTGTTCGGA
TTTAATAATAATCTTGGTAAAAGGAATAGTAGATCTTGCTTTGCGCGTTTTCATTTTTTGTCGCGAGAATTGTTGCCCCA
TAATCTGACGTCTCGTTGCGTGAAAAGTCGATGTCTTCACTAGAAAATCAAATGGTCTGGATGATGCTTGTTCGGGTCAT
AATTTTTGCTCCTG----------------------------------CAGTTTCTCTAATGCTTCACTGCAA-TCCAAC
TGTCAAAAAACCGCGTTATTCCAACTGCTCG-TGCCTGTATTCTG--CTAATTCT-TGAGAAGAAGTCAAATCATTATTG
ATTTACAAATGAGTATTCAACTATGAATGCCCGCCGATA-------------ATGATCAATATTGCTTTGTTTTTTATTC
GCTGAACAGGACA-TTTTATATAAGCAATAATTGCCCGTATAATACTACCGGTTGCGTACCAAGTTCAGCTCACAATCTT
TTC-TTCCTCGTGTTGTATTTCAGGATACTTGAGAAGGCCAGGCTGCCGCGGG--------TTCTTCAGCAAGATTCAGG
GATCTGTTTGATACTGAACAGACCCTTGACCTCTTTGTGCATCACCCATCTTTTTTACAACTTGCGGCAAGAATTTGGCA
GCAAATGGGTCGAGGAATCGCTGCGATTCCTGGCCTAAGGTCTCCCGGCGGCGTTTCTTGTGACTTCTGTTCGAAATTTC
ACTTCAACATGTGGTTCATGCTAATCCAAGCTTCCAAAGTTGGAATCTGATCACTTGTGACAGCGTTTCCCCGTGTTCTT
AGTTCCCGGCAATATGGACACGGAGACCTCCTGGGTTAGGAGGACTAAGTTTTCGCACACCGTCTACACAAGGGTTAGTT
CCCATGGGGTGCATGTGGCTCCTCTTGGCAGGGATGTGGAGCAGAGACTTCAGAGGTTTGTGAGCATGAGTAAGTGTGTG
ACGATGCCCATTGATCGAGGCAATGATGAAACAGTGGCTGCGCTGAAGCATACTGCTAGTTTGCCATCACTTCGAGCCTC
ACTTCAGCCTAATGAGAAGAAGGCCAGCAAGCAGAAGATGAGTTTGGAGATTCCTTTGAGCCCTCCGGCAAAGTCTGAGA
AATCCAAGGCCCCAAGGGCGAGGAGCCTGGTCAAGAGCCCAAGCTCGATGATGCTCCTTAGCTACTTAAATAATGCACAC
ACAAGTCAGGGCTCCAACCTTCATCAAAAGGCTAATGGATCTCCTCACAAGCTGAGATCCAAGTCCCCTCTTCCCAGCGT
AGTGCCTTCAGATACATTCAGGGAAGCGAGGGCCAGCAGTCAGAGGTTCACAAGCCCTCCCCCGAAGCGTGTGGGATCTG
ATAAAAGCGTCTATGGCAAATCGTTGGGCAGGGAAGGGTGTGATATGGGTCCAAGCCCTGATTGGTGTTCGACTCCGGTG
GTCTCTGATAAGCACAATTCTCAGAAGGATAGCTCATGGACCAGAAGATACTTTGACAATGGGGGAAGGAGGAGGGTTAG
TGCAGTAGAGACTGTGAGGAGCCGTACGGTTAGCATGGCTCAAGCGGTGCAATCTACAGTTGATTGGGAACTTGATCCAA
CCAAGCTGCTTGTTGGCCATAGGTTTGCTTCTGGGGCACATAGCCGGCTATACAAAGGACTTTACGACAATAAGCCGGTT
GCCCTTAAATTTATCCGCCGGCCTAAGCCTGACGCTGGTGGGATAATAGCTGCAAAGCTTGACAAACAATATAACACTGA
GATCAATGCATTGTCTCATCTGCATCATAAGAATGTGATCAAGGTATAATTACATTCAGACTTTTCAAGATGTACTGTTT
TTCTTATTATATCTCTGGGCATAGATAGTGCAGAGTGTTTGGTTTGATTTTTCTCCCTTAGCCTTATAGTGGTCATGCAA
TCTAATAAAATCACACGGGCACGTTCATGCTCCTTTTTTTGCAATAGAAAAATACTTTGAGGATGT-------TTGAACC
TTTTGTTATAATCAACTCATGATTGTCTGCCAACTTGCTATACACCTTCAGAAGAAGAAA---ATTAAGTTGATGTTATC
TTAGGATAAGCACCGTTGCTATTTTCA--GTGTGCCGTCAAGTGCTCAAAATATTCACCAATAAGTTTATTTATTATATG
AGCTGACCACAGTCCGTAATATTAGTGAATCATGCCTCGTTATTGATTAACCTTGTCTCATTTCATTTTGTTGGTAACTT
CTGATTTCATTTTGTTGGCAACTTCTTAATGCAGCTTGTAGCGGCTCATAGATGTGGACCGGTTTATTACATTATTACGG
AGCTTCTTCCTGGAGGTTCCTTGAGGTCATACCTGCACAACCCAGAGCACCACCCCCTCCCTCTGGAGAGGACCATATCC
ATCGCTCTGGAGATTGCCCGCGGGTTGGAGTACATCCACTCTCAGGGAATTGTCCACCGCGACATTAAGCCCGAGAACAT
CCTTTTTGATGAGAAGTTCGAGGTGAAGATTGCTGATTTCGGCATTGCCTGCGAGGAAACGTTATGTGATCTGCTAGTGG
ACGATGAGGGCACGTACCGCTGGATGGCCCCTGAGATGCTAAAGCGCAAGCCGTACAACCGGAAGGTGGATGTATATAGC
TTTGGACTGCTGCTGTGGGAGATGGTGACCGGAAGAATTCCTTTCGAGAACCTCTCCCCAGTCCAGGTGGCTTATGCCGT
TGCGAATAATGTAAGAGTTTAATTATGAGTGTGAGTTTGCCTTCTTTGCAGAACGTAATCAGAAGATGTACGCGTTCTCT
CCTTGACTAAATCC-TTTGGTTTTGTTTCAGAACAAGAAAGTGATGGAGCCTCAAGATTACTGCCCAGCAGTAGTGAGAC
CCCTGATTGAGGAGTGCTGCGCGTTGCAGCCTGAGAAGAGGCCGGATTTCTGGCAGATTGTGAAAACCCTGGAGAAGATC
CAGTCGGTTATGTCGCAGGGCGGCTGCCTGGACGCGCTGAGGAGCAGTGACCACAAGAAGGGGCTTAAGCACTGGATTCA
GAAACTGAAGCCATCGCACAGCGCGTGAGCTCAGTCATCTAGCATTGTTTCGACCGTTATTTTATCCGGTTGGGTATGCT
CCCCTAGTCTAG-CCTAGCGTAAGATGATATAAGCTTTTCATTTCGTGTTTTAAGATTCTAGGATGGATGCGGATGTTTA
TTAGGTGAGCTACAATTTGCTTTTTTATTAC--ATTATTAGTAGTTGTATAC--CATATCAAACTTATACTATGT--GTT
ATCTCATTGGCTCTTGCTCCCTGTCGCTGTCTGC---TAAGCTCAGTCGCAGTGCAGATTATTCATATTGGTCGAAATCG
TCGATAGAAGTTAGTCATGATTATTAGCCTGCTCTTAT---AGAAGTCCCTCATTTAGATAGAGATTGCCGAGGAAAGCC
CGCCGACTCGCCGGCATTAGCATCATGGGC----AAGTGCGTGGTTAATTAACGCAATTATTGGCACCTTTGTTCGTCAG
CATGCCACT--GACTCCTCATGGTGCTTTT--------------------------------------------------
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>SNPs
------------------------SS-------------------------S---------------S----S-------
-----------------------------------S---SSSSS-SS------S----S---------------------
----------------------------------------------------SSSS------------------------
------------------------------------------------------S-----S---------S---------
---------------SS----------------S----S--------------S--------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--------------------
-------------------------------------S-------SS---------------S----------------S
--S-SS------------------SS---S---------SSSSSSSSSSSSS----------------------------
-------------S---------------------------------------------------------S--------
--S-----------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S----------S--------S--------------S----------
----------------------------S----------------S----------------------------------
--------------------------------------S-----------------------------------------
---------------------------------------------S--------------------S-------------
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-----------------------------------S--------------------------------------------
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----------S---------------------------------------------------------------------
-------------------------------------------S------------------------------------
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---------------------------------S----------------------------------------------
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-------------------------------------------------S----S-------------------------
------------------------------------------------------------------S--------S----
-----------------------------------------------------------SSSS------S----------
------------SS-------------S--------------------------S-------------SS-SSS------
----S---------S------SS----------S---S------------------------------------------
------------------------------------------------------------------------S-------
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------------S--------------------------S------------------------------S---------
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-----------------------------------------------------S--------------------------
-------------------------------------------------------------------------S------
--------------S-----------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------------S-------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------------------------------------S---------------
---------------------------SS-SSS-----S---------------S--------------------SS---
-------------------S-SS---SSSS-SSSSSS----S--------S-----------------------------
-------S--S-------S---------------------------------S------------------------SS-
-------------S---------------SSSSS-------------------S----------SS--------S-----
-------------S-S---------------------S-------S----------SSSSS---------------S---
------------S----S-------------S------------------------------------------------
--------------------------------S-S-------------------------SS-------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS
>forward_214
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----------------------------------GGTCGTGGTTTGGGAAGTCA--------------------------
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>reverse_1149
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----------------------------GAGGGATGTGGAGCAGAAACT-------------------------------
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>forward_354
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---------------CCGCGTGAAAAGTCGATGC----------------------------------------------
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>reverse_2348
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---------------------------ATGTGCCGTGAAGTGCTCAA---------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_1166
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGGAGGGATGTGGAGCAGAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_2791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTGCTAGTGG
ACGATGAGGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_1347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GAGATTCCTTTGAGCCCTCCT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_3313
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GGTCTTCTAGCATCGTTTCGAC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
