>input_sequence_35847
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------------------------------------------------------------------------ATGGGCGC
GCTCTGCCTGCTCCCGTCCACGCCGCCGTCCTGCTCGGGCCGCGGCCTGGCCTCCTCGCCGCGCCCGCCCAGACCCGCGG
CCGCGCTTCCCCTGCGCCCCTCCGCTTCTCCCTGGCCGCGGCCCCAGCTCGCCGCGGGCGGGGGCCGGCGGCGGCTCGCC
GGCGTGGCGCGTGGCAGCGGGGAGAAGGGGGGCAAGAACGGCGGGGCGGAGTTCTTCCGGGAGGACGGCGTGGTGGACGA
CATGGACGGGTACCTCAACTACCTGTCCCTCGAGTATGACTCCGTCTGGGACACCAAGCCTGCTTGGTATGGCTTCAGAT
AG-CTCCTTCCTCCTTACTTTCCCTCTAGAAGAAACTGAAATTTAAGAAGGCTGTGGCGCAAAAGTTCGATTTGTTGCTA
CCTGTATTTATTCAGGCGGATACCTCTAGTTTTTTGTTAGTATTGTTCTTGTGTATTGTGACCAGATTATAGTACGGCAG
TACTGTTGCAAAGCTTAAATGGTCGCCAGAATCTGGAACGAACTACGCTTTTACCTTTAATGACCTGA---CTGCTGCCA
AAATTCTATTTGTCTGTTCGCTGTAAACAAGTTATGAGTTCTCTTGAGTGATGTGTGCCAATTTA-----GGCTGAGTTT
GCGGTGTCTGAACTGTATTAAACCTGGCTGCACTGAACTTATTTTAGTAAGATGATGTGCAGAAGTGGTGCAAAAATAGG
ATCCATGCTTGTCAAATCAAATTAGAATCTAACTAACTCTTACAGTACCTTTCAAAAAAGAGTCGATAGATCTCTTTTGT
AGTATTATTTGGCAGTAT---------CACAAGAGTCGATAGATCTCTTTTGTAGTATTTTACTAGCCAAGCACAATTCT
AAACTCATTGCAAACCATCTATATGCGGTTTAACCAAG-CGGGGTTTTCACGGTTCACCACAATGCGTAACGTAGCCTTA
AAATATCTATGCTTGATGCTACCGATTCAGCCTCACTTCTCTTACTACCTGGTAAACAAGTAACTCGTTTTCAAGTTTCA
TCAGCATATAAAGGTTGTAACATGTAGTGCTTGCTGCAGTTTGTCAGCCTGGTTTTTACTTCTTTTTTCTGACCTGTAAC
A--TTTTTTTGCAATAAATAAGGCTGCGTGCATCACCCGAGTCAGAGGCCCGGGACGATCCCTCCTTTCCGATTTCTTTT
TTTA-----TAACAGTTAATGCTATGTGGCAATGGAGCTAGGCGATATATACT---ATAATTTATTTTTGAGGAATTATA
TAAGATAGTTAAGAAGGCAGATAT--------TATATTTCAACCAGTTCTTGTTTTGTCGTCCTTTTTGAACATTTATGG
TCTCAACCTCTT--ACTAGTGACTACAACCATATCTTTTTTC--------------------------------ACCAAT
ATTGACCTCTGAATTTTTTCTATTGTAGGTGTCAGCCTTGGACAATATTACTAACAGGAACCGTTGCAGTTGCGTGTAGT
TGGGTGCTCATCCACTCTGCTGTGATTACCGGAGGAGTTTCTTTTGTAATATGTGCATGGTGGTACATATTTCTTTACTC
CTATCCTAAGGTTTCTGCACCATTTTTCTAACCCTTTCTTTATGTTATTTCTTTTTATTGAAATTATTGTTCAGAGGTTT
GGTTTCCTAAAAGGTTCTAGTGTGTTGCGCTCTTAAATTTACTTTCTTTCAGAATTATGGAAATTTTTCCAGACTGCTAA
TTCTGGAAGATGGTAATAACCTATTATTTGACATTAACATGACTCTTACATATAAACTAATGTTGTTAT-------AAGT
TATAACTGATAATCTGCTAGATAGTCCTGTCTGTTTTGACGCATAAACTATGTTATTACTATTAAACAACACAAAAAGAA
AGAGATTTACAAATAACAACACAAAAGAAAACTTACAAACTACTCCCTCCGTCCCATAATGTAAGACGTTTGTGCAAGCA
ATGTAGCTTGCAAAAACGTCTTACATTATCGGACGGATGGAGTACAATTACCAGCAAACTGATTGTGGTAAGTGCTAACG
TCAGACATTTTCTTCTTTCATGTAGAATTCTTTGATCGGAAAGTATTCTGGACATCAGTCCACAGTATTATTATTTTCTA
CTACGCAATTACAAATTTCAGGTGCAGAACTAAGTTAGAGCTAACCCTATGGCTTTGTCAGGCATACACCAATATGATAT
CCGAGAGGAGGAAAAAGGTGGCCAGCGGTGCTGAAGATACCTACGGGATGGAGAAAATGTAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>chr4A_1_TraesCS4A01G275200
ATCAGAAAATTCAAAGATTATTTTTATTATAAAAATCACCTTTCTCCTAAAGTGTTTGAAATTTTCAAAAGATGTTCACA
CTTTTCCAAAAAACAACTATAATTTAAAAAATTGTTAGTTTTTCAAAAAATATTTGAAATGTAAAAAAATGTTCACAATT
TAAAAAATGGCACAAAAAGTGTTGAAAATTCCAAAAAGTCTTAAATTCAATAAATTGTTCGGAAGAATTAAAAAATGTAC
AAAAGTCACTTTCTTTTGAGTTTCAAAAAGTGTTGTGAGCCGTTACGGGCACTCGCTTGAATGCTTGCCGATGGCCGACC
AAGTTGGGCTCGGTGTGTGTGCCTCAATCTCTATTTGACGAACTCCCCGACCCGCCTTATACCAAATTTATATCATATTC
ATCTCTCTTGCGTCACATATTTGACATCTGGGGTTAGGGATTTGGACAAGAGCAATGGTCCTAGATTTGATGCAAGGGAA
GAC-----TTCCTTGGTGGAAGAAGCGAATTTGAAACCATGGGACCAAATATGACACAGTGTAACAAC------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TACAAGGTGA
AATCAGAAAATTTCAAACGAGGCATGACCTATCACAAACAAAACAAGGGCAAAAAGAAAGAAAGAAAAATCAGGATCCCT
TGTATTTTCTGAAAGGTTATTGGGCCGTCCCGGGCTTGAAATGGGGCCGTACAAACAAGC--------------------
--------------------------------------------------------------------ACTTGTAAGTTT
AGATCTGCGAAGCCCACCTCAAAAATC-ATTTTTTTTATTGCGAAAGAAGCGAAA--------CGATAGCCGG-------
-AGAAGCTGGACGCAGCCGCACCGTACAGCCTCACTTTACTTCCCACTTAGATAATTTGCCCCCCAGGAGAGGCTGCCGG
GTGGGGCCGGGGCCACTGGTCATTGAGACAATCCTGAGGCAAATCATCTAACCCTTTATAAAATGGGGTAAATCATCCAT
TTTTTTTAATTGCGAAGGAAGCGAAACGATAGCCGGAGAAGCTGGAAGCGAAACGTGAGCGGAAGCCAAGAAATGGGCGC
GCTCTGCCTGCTCCCGTCCACGCCGCCGTCCTGCTCGGGCCGCGGCCTGGCCTCCTCGCCGCGCCCGCCCAGACCCGCGG
CCGCGCTTCCCCTGCGCCCCTCCGCTTCTCCCTGGCCGCGGCCCCAGCTCGCCGCGGGCGGGGGCCGGCGGCGGCTCGCC
GGCGTGGCGCGTGGCAGCGGGGAGAAGGGGGGCAAGAACGGCGGGGCGGAGTTCTTCCGGGAGGACGGCGTGGTGGACGA
CATGGACGGGTACCTCAACTACCTGTCCCTCGAGTATGACTCCGTCTGGGACACCAAGCCTGCTTGGTATGGCTTCAGAT
AG-CTCCTTCCTCCTTACTTTCCCTCTAGAAGAAACTGAAATTTAAGAAGGCTGTGGCGCAAAAGTTCGATTTGTTGCTA
CCTGTATTTATTCAGGCGGATACCTCTAGTTTTTTGTTAGTATTGTTCTTGTGTATTGTGACCAGATTATAGTACGGCAG
TACTGTTGCAAAGCTTAAATGGTCGCCAGAATCTGGAACGAACTACGCTTTTACCTTTAATGACCTGA---CTGCTGCCA
AAATTCTATTTGTCTGTTCGCTGTAAACAAGTTATGAGTTCTCTTGAGTGATGTGTGCCAATTTA-----GGCTGAGTTT
GCGGTGTCTGAACTGTATTAAACCTGGCTGCACTGAACTTATTTTAGTAAGATGATGTGCAGAAGTGGTGCAAAAATAGG
ATCCATGCTTGTCAAATCAAATTAGAATCTAACTAACTCTTACAGTACCTTTCAAAAAAGAGTCGATAGATCTCTTTTGT
AGTATTATTTGGCAGTAT---------CACAAGAGTCGATAGATCTCTTTTGTAGTATTTTACTAGCCAAGCACAATTCT
AAACTCATTGCAAACCATCTATATGCGGTTTAACCAAG-CGGGGTTTTCACGGTTCACCACAATGCGTAACGTAGCCTTA
AAATATCTATGCTTGATGCTACCGATTCAGCCTCACTTCTCTTACTACCTGGTAAACAAGTAACTCGTTTTCAAGTTTCA
TCAGCATATAAAGGTTGTAACATGTAGTGCTTGCTGCAGTTTGTCAGCCTGGTTTTTACTTCTTTTTTCTGACCTGTAAC
A--TTTTTTTGCAATAAATAAGGCTGCGTGCATCACCCGAGTCAGAGGCCCGGGACGATCCCTCCTTTCCGATTTCTTTT
TTTA-----TAACAGTTAATGCTATGTGGCAATGGAGCTAGGCGATATATACT---ATAATTTATTTTTGAGGAATTATA
TAAGATAGTTAAGAAGGCAGATAT--------TATATTTCAACCAGTTCTTGTTTTGTCGTCCTTTTTGAACATTTATGG
TCTCAACCTCTT--ACTAGTGACTACAACCATATCTTTTTTC--------------------------------ACCAAT
ATTGACCTCTGAATTTTTTCTATTGTAGGTGTCAGCCTTGGACAATATTACTAACAGGAACCGTTGCAGTTGCGTGTAGT
TGGGTGCTCATCCACTCTGCTGTGATTACCGGAGGAGTTTCTTTTGTAATATGTGCATGGTGGTACATATTTCTTTACTC
CTATCCTAAGGTTTCTGCACCATTTTTCTAACCCTTTCTTTATGTTATTTCTTTTTATTGAAATTATTGTTCAGAGGTTT
GGTTTCCTAAAAGGTTCTAGTGTGTTGCGCTCTTAAATTTACTTTCTTTCAGAATTATGGAAATTTTTCCAGACTGCTAA
TTCTGGAAGATGGTAATAACCTATTATTTGACATTAACATGACTCTTACATATAAACTAATGTTGTTAT-------AAGT
TATAACTGATAATCTGCTAGATAGTCCTGTCTGTTTTGACGCATAAACTATGTTATTACTATTAAACAACACAAAAAGAA
AGAGATTTACAAATAACAACACAAAAGAAAACTTACAAACTACTCCCTCCGTCCCATAATGTAAGACGTTTGTGCAAGCA
ATGTAGCTTGCAAAAACGTCTTACATTATCGGACGGATGGAGTACAATTACCAGCAAACTGATTGTGGTAAGTGCTAACG
TCAGACATTTTCTTCTTTCATGTAGAATTCTTTGATCGGAAAGTATTCTGGACATCAGTCCACAGTATTATTATTTTCTA
CTACGCAATTACAAATTTCAGGTGCAGAACTAAGTTAGAGCTAACCCTATGGCTTTGTCAGGCATACACCAATATGATAT
CCGAGAGGAGGAAAAAGGTGGCCAGCGGTGCTGAAGATACCTACGGGATGGAGAAAATGTAACCTTGTTTGTAGTATTAT
TTCCAGGGATAGATAGAAAATGGTTCTGCAGGTTGCACTACTGATATGTAGAATTTATTCCTCACAAAATCGCTACATCA
AAATACAGAATCATGCTTCTCGGCTGCTTCCTCATTTTTTCCTTCTTCATTGGAGTGTGCCTCACTACCTTGGAAAAAGA
TCAGCATTGTACATGTCATCACTTCTTTCTGATATATAGGTGAATGTGTGAGAGTGGATTTCGTGCTCCCAAATGCGATT
TCGCTCACAAGTCTGATTTCGC----------------------------------------------------------
-----------TCACAAGTCTAGGTACTGTCTTCGATGTGCAAACTTGGTTGAAGATGCCGCTCATATCTTCCTCCACTG
CCTGCCTCATAAGTTTGCTCATATTTTAATTTGTAGATCATGGCAATTTTAGTTTTTTGATGATGACAATTCCAGTACTT
TGACCATGAAAATATTTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTTATAATGCATG
GCAAGTCTAGTTTCTTAATTCCTCATTTTATAATATGTCAAATTTTAAATGCAGAAGAAAATAGCTGAAACATATCATGG
CAACTTTAGTGTAAACATCATTGCAATTCATGTGCAATAGACATGACAATTTTTAACCAAAAAAAATTTCGTTGAAATAT
ATTAATATGAGATTTAGTTTTGAAGATCTCGTCGCGAGGGATTTAATGATGAAAGCGCATCTTCAATCGGATTTTTCCAT
TTAAGAGATAAAACATTTTAAAAACTGAAAATTCAAAAAAAAAAACCCCACATGATATGGTGACATGGCGTAGTCTGTGT
CATGAGCGTGTGGGCTCGCCATTAACAACCGAAACGATTTCCTTCCTAGTTCGAAGCATGGGAGGAGAATGAGAGCGGCG
GTTCGCACGAAGCGGCCGCGGCGGCCACCGCCGGCGGCGGCGACGGCACAGCTGGCTTCCAGTTCCAGGCCGAAGCTGGA
GAAGGCGCAGG
>chr4B_365
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCCCAACCCGCCCTACACCGAATTTATTTCATGTAC
ATCCCTCCTCCGTCGCATGTTTGACAGTTGGGGTTAGGGATTTGGACAAGAGGGGTGATTCTAGCTTTGACACAAGGGAA
GAGAGACTTTCCTTGGTGGAAGAAGCGAATTTGAAACCACGGGACCAAATAAGACACAAAATAACAATTATTGCCTCCGT
TCTTAAATATAAGTCTTTTTTAGAGATTTCAATAAGAAACTACATGCGGAGCAAAATGAGTGAATCTACATTCTAGAATA
TGTCTATATACATCCGTATGTAATTTGTATTGAAATCTCTAAAAAGACTTATATCTAAGAACGGAGGGAGTACAAGTAAA
AATCAGAATTTTTCAAATGAGGCATGACCTATCACAAACAAAACAAGGGCAAAAA------AAAAAGAAACAGGACCCCC
TGTATTTTCTACGAGGTTCGGA-------CCGGGCTTGAAATGGGGTTGTACTAACGGCAAGAGGACTTGTCAGTTTCTC
TGCAGCAGGCCAACAACTTCTACGGGCCAAAATGGTGAAATTTCAGTGGGCTAGGCCGTGTTTCTACAACTTGTAAGTAT
TGATCTGTGAAGGGCCCATCGAAAAACAATTTTTTTTATTGCGGAGGAGAAAAACCACTGAGCCGATAGCCGGAGAAGAG
AAGAAGCAGGACGCAGGCGCACCGT-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ACGTGAGCGGAAGCCAAGAAATGGGCGC
GCTCTGCCTGCTCCCGTCCACGCCGCGGTCCTGCTCGGGCCGCGGCCTGGCCTCCTCGCCGCGCCCGCCCAGACCCGCGG
CCGCGCTTCACCTGCCCCCCTCCGCTTCCCCCTCGCAGCGGCCCCAGCTCGCCGCGGCCGGGG---GGCGGCGGTTCGCC
GGCGTGTCGCGTGCCCGCGGGGAGAAGGGGGGCAAGAACGGCGGGGCGGAGTTCTTCCGGGAGGACGGCGTGGTGGACGA
CATGGACGGGTACCTCAACTACCTCTCCCTCGAGTATGACTCCGTCTGGGACACCAAGCCTGCTTGGTATGCCTTCAGAT
AGCCTCCTTCCTCCTTTCTTTCCGTTT---AGAAACTGAAATTTATGAAGGCCGTGGCGCAAAAGTTCGATTTGTTGCTA
CCTGTATTTATTCAGGCGAACACCTCTAGTTTCTTGTTAGTATTGTTATTTTGTATTGTGATCAGATTAGAGCATGGCAG
TACTGTTGCAAAGCTTAGATGGTCACCAGAATCTGGAACGAACTACGCTCTAACCTTTAATGATCTGATGACTACTGTCA
AAATTGTATCTGTCTGTTCGCTGTAAACAAGTTATGGCTTCTCTCGAGTGATGTGTGCCCATTTA-----GGCCGAGTTT
GCGGTGTCTGAACTGTATTAAACCTGACTGCACTGAACTTATTC-AGTAAGATGATGTGCAGAAGTAGTGCAAGAACAGG
AGTCATGCTTGTCAAATCAAATTAGAATCTAACGAACTCCTAC-------------------------------------
-AATACCAAATGAAAAACACCACTTACCACAAGAGTCGATAGATCTCTTTTGTATTTT----------------------
--ACTCATTGCAAACCATC-AAATGCGGTTTAACCAAATCGGGGTTTTCACGGTTCACCACAATGCCTAATGTAGCCTTA
AAATATCTATGGTTGATGCTACCGATTCAGCCTCACTTCTCTTACTACCTGGTAAACAAGTAACTTGTTTTCAAGTTTC-
--AGCATATAAAGGATGTAACATGTAGTGCTTGCTGCAGTTTGTCAGCCTGATTTTTACTTCTTTTTTCCGGCCTGTAAC
A--TTTTTTTGCAATAAATAAGGCTGTGTGCATCACCCGATGCAGAGGCCCGGGATGATCGCTCCTTTCCGATTTTTTTC
TT------CTAAAAGTTAATGCTATGTGGCAATGGAGCTAGGCGATATATACTAGTATAATTTATTTTTGAGGAATTATA
TAAGATAGTTAAGAAGGCAGATATTACTTGAGTATATTTTAACCAGTTCTTGTTTTGTTGTCCTTTTTGAACATTTATGG
TCTCAACCTCTGTGACCAGTGACTACAACCATATCTTTTT-ACTGGTTTTGTATGCTTCGGTCTTCTCATTTTGACCAAT
ATTGACCTCTGAATTTTGTCTGTTGTAGGTGTCAGCCTTGGACAATATTACTGACAGGAACCGTTGCAGTTGCGTGTAGT
TGGGTGCTCATCCACTCTGCTGTTATTACCGGAGGAGTTTCTTTTGTAATATGTGCATGGTGGTACATATTTCTTTACTC
CTATCCTAAGGTTTCTGCACCATTTTTCTAACCCTTTCTTTATGTTATTTCTTTTTATTGAAATTATTGTCCCGCA----
-----------------------------CTCTTAAATTTACTTTGTTTCACAATTATGGAAATTTTA-CAGACTGCTAA
TTCTGGAAGATAGTAATAACCTATTA----------ACATGATTCTTACATATAAACTAATGTTGCTATGAGTTATAAGT
TATAACTGATAATGTGCTAGATACCCCTGACTGTTTTGCCGCATAAACTATGTTATTACTATTAAACAACACAAAAC-AA
AGAGATTTACAAATAACAACACAAAAGAAAACTTACAAACTACAATA---------------------------------
------------------------------------------------TACCAGCAAATTGATTGTGGTAAGTGCTAACA
TCAGACATTTTCTTCTTTCAAGTAGAATTCTTTGATCGGAAGGTATTCTGAACATCAGTCCACAGTATTACTATTTTTTA
CTGCACAGTTACAAATTTCATGCGCAGAACTAAGTTAGAACTAACCATGTGTCTTTGTCAGGCATACACCGATATGATAT
CTGAGAGGAGGAAAAAGGTGGCCAGCGGTGCTGAAGATACCTACGGGATGGAGAAAATGTAACCTTGTTTGTAGTATTGT
TTCCGGGGATAGATAGAAAATGGTTCTGCAGTTTGCACTACTGATCTGTAGAATTTATTCCTCACAAAATCGCTACATCG
AAATACGGAATCATGCTTCTCGGCTGGTTCCTCATTTTTCCCTTCTTCATTGGAGTGTGCCTCACTGCCTTGGAAAAAGA
TCAGCATTGTGCATGTGCTCACTTCTTTTTGATATATAGGTGAATGTGTGAGAGTGGATTTCGTGCTCCCAAATGCGATT
TCACTCATTAGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATTTAAAAAAATCA
CATTTTAAAGTTCACAAGTCTAGTTACTGTCTTCGATGTGCAAACTTGGTTG-AGATGCTGCTCATATCTTCCTCCACTG
CCCGCCTCATAAGTTTGGTGCCGACTCGCATTCTGGGTTCCCTCTTTACACTTGGTGTGAGACTCTCCCTCCGTTGGTCT
CCAT----------------------------------------------------------------------------
-----------------ATGGCCCTTTCAATCTTATGGAAAATTTGGGATTCAAAACGTCAAGCTTTTTCGGCGCCAACT
TCTCGTCGTGCTGTAGCACACCTCATGTAATTCTCTCCAACTAGTTTGGTTCCTTGAGTGATGCATTGAGGTGGGGATGA
ATGCGCCAACTTCTATGGTTCATTTTTTTACAAGGGGGTTCTATGGTTCATTCAAGCTTTAGGGTTCACCGTTTAATTTG
GGCCACCTGTAGTAGTTCGGTATGCTTATCCGGCCCAGATAGCTCTAGAAGCAGCCCAGTTTTGTGCCA-----------
---------GTGGGCTCGCCATTAACAACCGAAACGGTTTCCTTCCTAGTTCGAGCCATGGGAGGAGAATGAGAGCGGCG
GTTCGCACGAATCGGCCGCGGCGGCCACCGCCGGCGGCGACGGCGA---AGCTGGCTTCCAGTTCCAGGCCGAAGCTGGA
GAAGGCGCAGG
>chr4D_981
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----------------------------------------------------ACGTGAGCGGAAGCCAAGAAATGGGCGC
GCTTTGGCTGCTCCCGTCCACGCCGCCGTCCTGCTCGGGCCGCAGCCTGGCCTGCTCGCCGCGCCCGCCCAGACCCGCGG
GCGCGTTTCCCCTGCCCCCCTCCGCTTCTCCCTGGCCGCGGCCCCAGCTCGCCGCGGGCGGGGGTCGGCGGCGGCTCGCC
GGCGTGGCGCGTGGCAGCGGGGAGAAGGGGGGCAAGAACGGCGGGGCGGAGTTCTTCCGGGAGGACGGCGTGGTGGACGA
CATGGACGGGTACCTCAACTACCTGTCCCTCGAGTATGACTCCGTCTGGGACACCAAGCCTGCTTGGTATGCCTTCCTGT
CC---CCTTCCCCCTTTCTTTCCGTTC---AGAAACTGAAATTTACGAAGGCTGTGGCGAAAAAGTTCGATTTGTTGCTA
CCTGTATTTATTCAGGCGAATACCTCTAGTTTGTTGTTAGTATTGTTACTGTGTATTATGACCAGATCAGAGTACGGCAC
TACTGTTGCAAAGCTTAAATGGCCACAAGAATCTGGAACGAACTACGCTCTAACCTTTAATGATCTGATGACTACTGTCA
AGATTGTATTTGCCTGTTCGCTGTAAACAAGTTATGGCTTCTCTTGAGTGATGTGTGCCGATTTAATTTAGGCTGAGTTT
GCGGTGTCTGAACTGTATTAAACCTGACTGCACTGAACTTATTC-AGTAAGATGATGTGCAGAAGTAGTGCAAAAATAGG
AGTCATGCTTGTCAAATCAAATTAGAATCTAACTAACTCCTACAATACCTTTCAAAAAAGAAAAGAAAAACTAACTCCTA
CAATACCAAATGAAAAACACCACTTACCACAAGAGTCGATAGATCTCTTTTGTATTTTTTTACTAGCCAAGCACAATTCT
AAACTCATTATAAACCATCTAAATGCGGTTTAACCAAA-CGGGGTTTTCACGGTTCACCACAATGCCTAACATAGCCTTA
AAATATCTATGCTTGATGCTACCGATTCAGCCTCACTTCTCTTACTACCTGGTAAACAAGTAACTCGTTTTCAAGTTTC-
--AGCATATAAAAGTTGTAACATGTAGTGCTTG------------------ATTTTTACTTCATTTTTCCGACCTGTAAC
ATTTTTTTTTGCAATAAATAAGGCTGCGTGCATCACCCGATGCAGAGGCCCGGGACTATCCCTCCTTTCCGATTTCTTTT
TTTTCTTTCTAAAAGTTAATGCTATGTGGCAATGGAGCTAGGCGATATATAC---TATAATTTATTTTTGAGGAATTATA
TAAGATAGTTAA-AAGGCAGATAT--------TATATTTCAACCAGTTCTTGTTTTGTCGTCCTTATTGAACATTTATGG
TCTCAACCTCTGTGACTAGTGACTACAACCATATATTTTTTACTGGTTTTGTATGCTTCAGTCTTCTTATTTTGACCAAT
ATTGACCTCTGAATTTTGTCTGTTGTAGGTGTCAGCCTTGGACAATATTACTAACAGGAACCGTTGCAGTTGCGTGTAGT
TGGGTGCTCATCCACTCTGCTGTGATTACCGGAGGAGTTTCTTTTGTAATATGTGCATGGTGGTACATATTTCTTTACTC
CTATCCTAAGGTTTCTGCACCA---------CCCTTTCTTTATGTTATTTCTTTTTATTGAAATTATTGCTCAGAGGTTT
GGTTTTTCTAAAAGGTCTAGTGTGTTGCGCTCTTAAATTTACTTTGTTTCACAATTATGAAAATTTT-CCAGACTGCTAA
TTCTGGAAGATGGTAATATCCTATTATTCGACATTAACATGATTCTTACATATAAACTAATGTTGTTATGAGTTATAAGT
TATAACTGATAATCTGCTAGATAGTCCTGTCTGTTTTGACGCATAAACTATGTTATTACTATTAAACAACACAAAAAGAA
AGAGATTTACAAATAACCACACAAAAGAAAACTTACAAACTACAATA---------------------------------
------------------------------------------------TACCAGCAAACTGATTGTGGCAAGTGCTAACA
TCAGACATTTTCTTCTTTCAAGTAGAATTCTTTGATCGGAAGGTATTCTGAACATCAGTCCACAGTATTATTATTTTTTA
CTATGCAATTACAAATTTCATTCGCAGAACTAAGTTAGAACTGACCCTATGGCTTTGTCAGGCATACACCGATATGATAT
CTGAGAGGAGGAAAAAGGTGGCCAGCGGTGCTGAAGATACCTACGGGATGGAGAAAATGTAGCCTTGTTTGTAGTATTAT
TTCCGGGGATAGATAGAAAATGGTTCTGCAGGTTGCACTACTGATATGTAGAATTTATTCCTCACAAAACCGCTACATCG
AAGTACGGAATCATGCTTCTCGGCTGCTTCCTCATTTTCCCCTTCTTCATTGGAGTGTGCCTCACTGCCTTGGAAAATGA
TCAGCATTGTGCATGTGCTCACTTCTTTTTGATATATAGGTGAATGTGTGAGAGTGGATTTCCTGCTCCCAAATGCGATT
TCGCTCATTAGTTTATA-------------------------------------ATATGTATTTTTTTTTTAAATATTTT
AAATT------TCACAAGTCTAGTTACCGTCTTCGATGTGCAAACTTGGTTGAAGATGCCACTCATATCTTCCTCCACTG
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------S--S---S-------S----S-S-
---S---S-S----S---S-------SS------------------------SSS--S-S----S-----SS--------
--S------------------------------------S-----------S------SSS------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SSS-
--------SS-------S-------------------------------------SSSSSS--S--S--S-----S---S
----------SSS-----SSSSSSSSSSS-----------------SS----S---SSSS--------------------
------------------------------------------------------------------------------S-
S------S----SS-S-S--S----S-----------------S-S--SSSS--S-------------------------
-------S--------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--------------------------------------------------------------------------------
---------------S------------------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
----------------S------S-S-SSS---------------S----------------------------------
------------------S-------------S--------------S---------------------S----------
------------------------S------------------------S-S-----------S---------S---S--
-----S------------------------------SS---------------------S--------------------
--------------------------S----------------SS---------------------S-------------
-SS------------------------------------S----S----------------SSS--S-S-SSSSS-SSSS
SSSSSSSSSSS-S-SS-S------------------------------------S-S-----------------------
---------------------S---------------S----------------------------S-------------
-------------------------------------------------------------------------------S
SS-------------------------------------------------S-----------------S----------
----------------------------------------SS--------------------------------------
---S--------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------------------S--------------------------------------
-----------------S---S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----SSSS---S-S------------------------------S-----S---------------S------------
----------------------------S-------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S
--------------------S--------------------S--------S--------------------------S--
--------------------S-S----------------S------------------------------S---------
-S------------------------------------------------------------------------------
----S--------------------------------------------------------------------------S
------S--------------------------------S--------------------------S-------------
----------S-----SS----------S---------------------------------------------------
-------SS---S-SSS-SSSS----------------------------------------------------------
-----------------------S--------------------------------------------------------
--S--------------S-SSSSSS-SSSS--S-S-S-SSSSS-SS-SSSSS-SS-S---SSS-SS-SS-S-SSSSSSS-
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--SS-S-S--SS--SS----SS------SSS--S--S--SSSS-SSSS-SSSSSSSSS--SSS
SSS-S-SSSSS-SS-SSS--SSS--SS-S--SSS-SSS-SSS-SSSSSS--SS-SSSSSS-SSS-S-SSS--S-SS--SS
--SSSSSSSSSSS-SS-S--SSSSSS-S-SSSS-S-S-SSS-S-SS-SSSSSS-SSSSS-SSSSSSSSSSS---SSSSSS
SSSSSSSSSS-SSSS--SSSS-SS--S-SSSSS-SS-S-S-SSSSSSSS-SSS-SSSS-S-SSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------S-----------------SS------------------------
-----------S---------------------------S--S--SSSS-------------------------------
-----------
>forward_302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTACGGGCACTCGCTTGAAT------------------
--------------------------------------------------------------------------------
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>reverse_2182
--------------------------------------------------------------------------------
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---------------------TATGCGGTTTAACCAAGCGG---------------------------------------
--------------------------------------------------------------------------------
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-----------
>forward_1244
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------AACGATAGCCGGAGAAGCTG------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_2973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GGTTCTAGTGTGTTGCGCTC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_1247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATAGCCGGAGAAGCTGGAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_3264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGACGTTTGTGCAAGCA
ATGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_3256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AAACTACTCCCTCCGTCCCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_4458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGGTGACATGGCGTAGTCTG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
