>input_sequence_35767
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-----------------------------------------------ATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAAG
GAGCGGGACAAGGAGGAACTGCAGGTGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCATGA
CGCGCGGCGCTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACCGGC
AGTTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTC
AGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCCG
AAGCCTTGATGTTGCTATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGCCATTCTCTTCTTTTCCTCATGCATTGCCTC
CAGCTCCAGCCAACTCAACATAAACATTGTGTCAGAGCTCATCCATGGCGGTCATCCGATCATTGACCCGAACAACCATC
CGTAATCTGGATGGCTTGATGCAGGTGATAACACCAATACTTTGATTCGTCATCCAGGGACATAAGGAATGGGTGACCGA
GGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGGA
TTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCTGCT
TCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTCTCAAGTACCTGCACGAAGATTCTGAATTCAAGGT
AAGCCTCATCACAGGCATGCAGTAACTCATTCAAATGCTATGATTGC----TGAAAGATACTGTAACATCATAGGAGCAT
GACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATCTGC-ATCTATGAATATGTTCTTCCAGATAATATT
CCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAATGCAAAACTGTCGGACTTCGGCTTGGCTAGACTGG
GGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCG--AAAGCCCATCTTCTTTGTCCAGCACCC-
------GATGGCACTATTCTGAATTCCATGGCGCAATGCTGACATATTGAACAGCATACTGGGACTTTCAAAGACAGCTT
TGCGAGTTTTCACCTAAGTATGATCGGTTCAGTAGGTACTTGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTTTC
GTACTTGTCAGACAAACCGAAAACCAGGAATGGTTAAAAGAAA-CTCCTCGACATGAATGGATGCTTAGCAGTCAGCAAG
TACTTTTAAAAGATTATTGGCTTGTGAAATAAGAAATTGACAATACCATCATCCTAGATGAACAAGCAGAACAAA-GGTA
GGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGACGACCGGTTAGGAAAGCCAGCTAACCCTGCTGGTTGG
TAAAAATCAGCTAGTAACTTTTCTGGCTGCTTTCCAATTGTAGAATTTGATCACATGTGATGATAAATTTCCAAGTAAAA
GTAGCCTCAGTTTGCAGCTTAACTCTAGATACCTGACATTTGTTACATATAAAAGGTAGAGTAAAATTTCTCTTTTCATT
TGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAA
TGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGGTG
AGCAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTGGAGACCATAATGGACCCAAGGCTTGAA
GGGAACTACAGCCTGAAGTCGGCAGCCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACC
TAAGATGAGTGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAA
GCCATTCAAAAGAACTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCAGATATTAAAGCT
GGAGATGGTAGATGGTTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGA--------------------
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>chr1D_1_TraesCS1D01G140300
AAATCGCTATGTTACTTCGGAAAACATATACAAAGGTTGCTTTCTGAGAGATCTGTACAGTGAGTACATCATGTACGGCA
ACCATACGCTCCACTGGTGATTACTCTTTTAGTAGT--TTTCTTCTTGTGAACTTTGATTACTCTTTTAGTTTTACTACT
CCACAACCATGATGAAAGTAATTGTTCCTGCGATTTGTGAGTTGCCATTTCCCTCTCCTCGCCGTGCTTATTTCAACACC
TGCACCCATCACT---------------------ATCCAAACCCTCACGTTTCTCTCGCGTCCCCTC-----GTCCCAGC
TCCCAAAGCAAGCAA------------CGACCAACCAAGCAGAAAGAGACAGTCCGAAGCAGGAGCCGGCCATCCATTGA
CCTACTAACTACGCAATCCAAT--CCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATG
TGGGGGAGGCTCAGCTAGGTGGCT-TTGCCCAGGTGAGCAGGAAACGACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCA
TTTCAACTTCCCTTGGGTTGGTTTTGGACTTTGAAGAA---GGTTGAGCAATTGGTTGGTCGGTTGTTGGCTTGAAAGAT
CTTGCGGTTTCTGTCTGCCTGATCGTCTCCATGGGTGTATGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGT
TTAGATTGGTGCGTCTTTTGCATTGGTAATTGATTGATCCAGTAGGATCTCATCTTTATTTGAAAAGTGCCAATCTCTTT
TGCCTCTTCTGAAACCCCTTCAGTTTTCTTCTTTTGACGCCTTCAAGGTTTC------------------------TCTC
TCTCCCTCCTTCTGGTTG---TAGAATAATGG-----CGCTGCTTTCTGCGCCTGGTCTTCTTCCCAATCAGTG------
-CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAATTGATTACTATAGTAGCTGAAAGGCTGCGCCGTTGATGC
TGTCATGTTATTGCAGAGCAGGA--GGGTCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAAG
GAGCGGGACAAGGAGGAACTGCAGGTGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCATGA
CGCGCGGCGCTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACCGGC
AGTTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTC
AGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCCG
AAGCCTTGATGTTGCTATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGCCATTCTCTTCTTTTCCTCATGCATTGCCTC
CAGCTCCAGCCAACTCAACATAAACATTGTGTCAGAGCTCATCCATGGCGGTCATCCGATCATTGACCCGAACAACCATC
CGTAATCTGGATGGCTTGATGCAGGTGATAACACCAATACTTTGATTCGTCATCCAGGGACATAAGGAATGGGTGACCGA
GGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGGA
TTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCTGCT
TCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTCTCAAGTACCTGCACGAAGATTCTGAATTCAAGGT
AAGCCTCATCACAGGCATGCAGTAACTCATTCAAATGCTATGATTGC----TGAAAGATACTGTAACATCATAGGAGCAT
GACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATCTGC-ATCTATGAATATGTTCTTCCAGATAATATT
CCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAATGCAAAACTGTCGGACTTCGGCTTGGCTAGACTGG
GGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCG--AAAGCCCATCTTCTTTGTCCAGCACCC-
------GATGGCACTATTCTGAATTCCATGGCGCAATGCTGACATATTGAACAGCATACTGGGACTTTCAAAGACAGCTT
TGCGAGTTTTCACCTAAGTATGATCGGTTCAGTAGGTACTTGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTTTC
GTACTTGTCAGACAAACCGAAAACCAGGAATGGTTAAAAGAAA-CTCCTCGACATGAATGGATGCTTAGCAGTCAGCAAG
TACTTTTAAAAGATTATTGGCTTGTGAAATAAGAAATTGACAATACCATCATCCTAGATGAACAAGCAGAACAAA-GGTA
GGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGACGACCGGTTAGGAAAGCCAGCTAACCCTGCTGGTTGG
TAAAAATCAGCTAGTAACTTTTCTGGCTGCTTTCCAATTGTAGAATTTGATCACATGTGATGATAAATTTCCAAGTAAAA
GTAGCCTCAGTTTGCAGCTTAACTCTAGATACCTGACATTTGTTACATATAAAAGGTAGAGTAAAATTTCTCTTTTCATT
TGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAA
TGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGGTG
AGCAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTGGAGACCATAATGGACCCAAGGCTTGAA
GGGAACTACAGCCTGAAGTCGGCAGCCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACC
TAAGATGAGTGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAA
GCCATTCAAAAGAACTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCAGATATTAAAGCT
GGAGATGGTAGATGGTTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAATATGGATGAGATG
TTCCTCGTTATGACTTTAACATCCAGAGATATTAGCA-AAAACAGCAACAGCTGAAATGCCACTTGAGTTGCTGTTTACC
ATACAATTCAGAGAACATGATAGCTAAAAACAGGCGACTTGGCAAA-------CCTAATGCTATCATCACTAA-------
------------------------------------------------ATAGTTCAGCATTACATGTTTTCACAAGAGCT
GGAAAATGAAAACTGAAGCAGTCCTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCGCATTTTTGCTGA
CTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGA
TTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATCTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTC
AGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAAAAATAGAATCAATGTGTTATAACTTTTACATA
ATTAAATTGATAATGAGAAGATGAGGTTATTATAAAACAAGAAAAAA-GGAGAAAATGTGGGGG-AAAAAGGCGGATTCA
CAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTATATTAAACAAAACATTGTTTCTTTAGTAAAGTACCATATG
ACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATATGAAATATAGCGTGCTCCGGATGTTTGGCATGACAA
AAATATATAACTAAGCAACACTAATTTTGGGAACTAAGATT-AAAAAATAAAATAGGAATAAGTACAGTGTGGTTTCACC
TTTGAGCGCTATACACAACCAGAGATCTGGTTAACGGGCAAAGCTCAGCACAGGCTACATACGCAGTTCTGGCACATGAT
CCTAGCAATTGGTACATTTTTACAACTGCAGATTCTTGAGAAAAACTATGGCCAGTGTATCAATTTGTGAAGCATACTTG
TAATGT
>chr1A_1
AAATCACAATGTTACTTGGGAAAACATATACAAATGTTGCTTTCTGAGAGATCCGAACAGCAAGTACATCATGTACGG-A
ACCATACGCTCCACTGGTGATTACTATTTTGGTAGTCTTTTCTTCTTTTGAACTTTGATTACTCTTTTAGTTTTACTACC
CCACAACCCTGATGAGAGTTCTTGTTCCTGCGA-TTGTCAGTTGCCATTTCCCTCTCCTCGCCGTGCTTATTTCAACACC
TGCACCCATCACG---------------------ATCCAAACCCTCACGTTTCTCTCGCGTCCCCTCCCCTCGTCCCAGC
TCCCAAAGCAAGCAAGCGAGCAGCGAGCGACCAACCAAACAGAAAGAGACAGCCCGAAGCAGGGGCCGGCCATCCATTGA
CCTACTAACTACGCAATCCAATATCCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATG
TGGGGGAGGCTCAGCTAGGTGGCTTTTGCCCAGGTGAGCAGGAAACGACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCA
TTTCAACTTCTCTTGGGTTGGTTTTGGA----GAAGAA---GGTTGAGCAGTTGGTTGGTCGGTTGTTGGCTTGAAAGAT
CTTGCGATTTCTGTCTGGCTGATCGTCTCCATGGGTGTGTGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGT
TTAGATTGGTGCGTCTTTTGCATTAGTAATTGATTGATCCAGTAGGATCTCATCTTTATTTGAAAAGTGCCAATCTCTTT
TGCCTCTTCTGAAACCCCGTTAGTTTTCTTCTTTTGACGCCTTCAAGGTTTC------------------------TCTC
CCTCCCTCCTTCTGGTTGTACTAGAATAATGG-----CGCTGCTTTCTGCACCTGGTCTTCTTCACAATCCGTG------
-CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAACTGATTACTATAGTAGCTGAA-GGCTGCACCTTTGATGC
TGTCATGTTATTGCAGAGCAGGAGGGGGTCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGACAAG
GAGCGGGACAAGGAGGAGCTGCAGGTGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCATGA
CGCACGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCCGAGATCAGCGTCGAGTCCTTTGGCCGGTACCGGC
AGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTC
AGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCCG
AAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGACATTCTCTTCTTTTCCGCATGCATTGCTTC
CAGCTCCACCCAACTTAGCATAAACATGGTGTCAGAGCTCATCCATGGCGGTGATCCGATCATCCACCCGAAAAACCATC
CATAATCTGGATGGCTTGATGCAGATGATAACACCAATGTTTTGATTCGTCATCCAGGGACATAAGGAATGGGTGACCGA
GGTGAACTTTCTTGGGGTGGTGGGTCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGGA
TTCAGTTGCTGCTCGTCTACGAATTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCCGCT
TCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTCTCAAGTACCTGCACGAAGATTCTGAATTCAAGGT
AAGCATCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTGATTGGTGAAAGATAAG-----ATCATAGAAGCAT
GACCTATTTTGGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATCTGCCATATATGAATATGTTCTTCCAGATAATATT
CCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAACGCAAAACTGTCGGACTTCGGCTTGGCTAGACTGG
GGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGC------------CCATCTTCATTGTCCAGCACCTG
ATGGGTGATGGCACTATTCTCAATTCCATGGCGCAATGCTGACATATTGAATAGCATACTGTGACTTTCAGAGGTAGCTT
TGCAAG--TTCACCCAAGTATGATCGGTTCAGTAGGTACTTGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTTCC
GTACTTGTCAGACAAACCCAAAACCAGGAGTGGTTAAAAGAAAACTCCTCCACGTGAATGGATGCTTAGCAGTCAGCAAG
TACTTCCAAAAGATTATTGGCCTGTGAAATAAGAAATGGACAATACCATCATCCTAGATACACAAGCAGAACAAA-GGTA
GGCAGTTAGGCACTTCCGGGTTAGTTAACATGCTAGTGTAGGAAGACCGGTTAGGAAAGTCAGCTAACCCTGCTGGTTGG
TTAAAATCAAC---TAACTTTTCTGGCTGATTTCCAATTGTAGCATTTTATCACATGTGATGACAAATTTGCAAGTAAAA
GTAGCCTCTGTTTGCAGCTTAACTCT-GATACCTGACATTTGTTACCTATAAAA-----AGTTAAATTTCTCTTTTCATT
TGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAA
TGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACAGGCCGGAGGCCTCTGGACCGGAACAGACCGAGGGGTG
AACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTTGAAACCATAATGGATCCAAGGCTCGAA
GGGAACTACAGCATGAAATCGGCAGTCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACC
TAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAA
GCCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAGCT
GGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAATATGGATGAGATG
TTCCTCTTTATGACTTTGACATCCAGAGATATTAGCA-AAAACAGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTACC
ATACAATTCAGAGAACATGATAACTAAAAACAGGAGATTTGGCAAGCGGCAAGCCTAATGCTATCATCACTAAATAATGG
CTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTTGCCACATAGTTCGGCATTACATGTTTTCACAAGAGCT
GGAAAATCAAAACTGAAGAAGTCCTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCGCATTTTTGCTGA
CTGAATTTTGAATTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGA
TTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTC
AGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAAAAATAGAATTAATGTGTTCTAACTTTTACAAA
ATTAAATTGATAATGTGAAGA-GAGGTTATTATAAAACAAGAAAAAAAGGAGAAAATGTGGGG--AAAAAGGTGGATTCA
CAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTGTATTAAACAAAACATTGTTTCTTTAGTAAAGTACCATATG
ACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATATGAAATATAGCATGCTCCGGATGTTTGGCCTGATAG
AAATATATAACTAAGCAACACGAATTTTGGGAACCAAGATTAAAAAAATAAAATAGGAATAAGTGCAGTGTGGTTTCACC
TTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAGCTCAGCACAGGCTACATACACAGTTCTGGCACATGAT
CCTAGCAATTGGTACATTTCTACAACTGCAGATTCTTGAGAAAAACTATGGCCAGCGTATCAATTTGTGAAGCATACTTG
TAATGT
>chr1B_1
AAATCACTATGTTACTTGGGAAAACATATACAAAAGTTGCTTTCTGAGAGATCTGTACAGCAAGTACACCATGTACGGCA
ACCATAC---------GTGATTACTCTTTTAGTAG--TTTTCTTCTTTTGAACTTTGATTACTCGTTAAGTTTTACTACC
CCACAACCCTGATGAAAGTTCTTGTTCCTGCGATTTGTCAGTTGCCATTTCCCTCTCCTCGCCG--CTTATTTCAACACC
TGCACCCATCACCATACTCGTCTCGCCTCTCGCCATCCAAACCCTCACGTTTCTCTCGCGTCCCCTC-----GTCCCAGC
TCCCAAAGCAAGCGAGC----AGCGCGCGACCAACCAAGCAGAAAGAGACAGCCCGAAGCAGGAGCCGGCCATCCATTGA
CCTGCTAACTAGGCAATCCAAT--CCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATG
TGGGGGAGGCTCAGCTAGGTGGCTTTTGCCCAGGTGAGCAGGAAACGACCCGCCCCGTGAAGAGAGCTTGGTGTC-----
TTTCAACTTCTATTGGGTTGGGTTTGGACTTTGGAGAACAAGGTTGAGCGGTTGGTTGGTCGGTTGTTGGCTTGAAAGAT
CTTGCGGTTTCTGTCTGGCTGATCGTCTCCATGGGTGTATGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGT
TTAGATTGGTGCGTC-TTTGCATTGGTAATTGATTGATCCAGTAGGATCTCATCTT-ATTTGAAAAGTGCATATCCCTTT
TGCCTCTTTTGAAACCCCTTTAGTTTTCTTCTTTTGATGCCTTCAAGGTTTCGCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCCTTCTGGTTGTAGAATAATGGCTCTTTTCCGCTGCTTTCTGCACCTAGTCTTCTTCACAATCAGTGCTTCCA
ACTTCCAAGATCCGAGAGCTTGCCTTTACCGCAGTCTGAAACTGATTACTATAGTAGCTGAAAGGTTGCGCCTTTGATGC
TGTCATGTTATTGCAGAGCAGGAGGGGGTCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAAG
GAGCGGGA---GGAGGAGCTGCAGGGGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCGTGA
CGCGCGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACAGGC
AGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCACGAGCTCAAGAGCGCCACCCGGAGCTTC
AGCCGTGCACTTATGATCGGTGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCCG
AAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGACATTCTCTTTTTTTCCTCATGCATTGCTTC
CAGCTCCACCCAACTCGGCATAAACATGGTGTCAGAGCTCATTCATGGAGGCGATCCGATCATCAACCCGAACAACCATC
GGTAATCTGGATGGCTGGATCCAGATGATAACACCAATGCTTTGATTCGTCATCCAGGGGCATAAGGAATGGGTGACCGA
GGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGGA
TTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCCGCT
TCATGGGCAATGAGGCTGAGAGTAGCACTCGACACAGCTCGTGGTCTCAAGTACCTGCACGAAGATTCCGAATTCAAGGT
AAGCTTCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTGC----TGAAAGATAAG-----ATCATAGAAGCAT
GACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATTGTCTGCCATCTATGAATGTATTCTTCCAGATAATATT
CCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAACGCGAAACTGTCGGACTTCGGCTTGGCTAGACTGG
GGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCAAAAAAGCCCATCTTCTTTGTCCAGCACCT-
------GATGGCACTATCCTCAATTCCATGGCGCAATGCTGACATATTGAATAGCATACTGTAACTTTCAGAAGCAGCTT
TGCAAG--TTCACCCAAGTATGATCAGTTCAGTAGGTACTAGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTTCC
GTACTTGTCAGACAAACCCAAAACTAGGAGTGGTTAAAAGAAA----CTCCACGTGAATGGATGCTTAGCAGTCAGCAAG
TA---------GATTATTGGCCTGTGAAATAAGAAATGGACAATACCATCATCCTAGATACACAAGCAGAACGAAGGGTA
GGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGAAGACCGATTAGGAAAGCCAGCTAGCCCTGCTGGTTGG
TTGAAATCAGC---TAACTTTTCTGGCTGATTTCCAATTGTAGTATTTTATCACATGTGATGATAAATTTCCGAGTAAAA
GTAGCCTCTGTCTGTACATTAACTCTAGATACCTGACATTTCTTACCTATAAAA-----AGTTAAGTTTCTCTTTTTATT
TGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACGGGACGCCTCAGCAGTAAGAA
TGACATATGGAGCTATGGAGTAGTTCTCTACGAACTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGGTG
AACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTTGAGACCATAATGGATCCAAGGCTCGAA
GGGAACTACAACCTGAAATCGGCAGTCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACC
TAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAA
GTCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAGCT
GGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAACATGGATGAGATG
TTCCTCTTTATGACTTTGACATCCAGAGATATTTGCAAAAAACAGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTACC
ATACAATTCAGAGAACATGATAACTAAAAACAGGAGATGT-------GGCAAGCCTGATGCTATCATCACTAAATAATGG
CTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTCGCCACATAGTTCGGCATTACATGTTTTCACAAGAGCT
GGAAAATCAAAACTGAAGCAGTCTTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCACATTTTTGCTGA
CTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGA
TTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTC
AGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAATAATAGAATCAATGTGTTATAACTTTTACATA
ATTAAATGGATAATGAGAAGAGGAGGTTATTATAAAACAAGAAG-AAAGGAGAAAATGTGGGGGGAAAAAGGTGGATTCA
CAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTTTATATTAAACAAAACATTGTTTCTTCAGTAAAGTACCATATG
ACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATAGGAAATATAGCATGCTCCGGATGTTTGGCATGATAA
AAATATATAACTAAGCAACACTAATTTTGGGAACCAAGATT-AAAAAATAAAATAGGAATAAGTACAGTGTGGTTTCACC
TTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAGCTCAGCACAGGCTACATACGCAGTTCTGGCACATGAT
CCTAGCAATTGGTACATTTTTACAACTGCAGATTCTTGAGAAAAACTATGGCCAGTGTATCAATTTGTGAAGCATACTTG
TAATGT
>SNPs
-----S-----------S----------------S-------------------------SS------------------
-----------------------------------------------S-------------------------------S
--------S----------SS-----------------S-----------------------------------------
------------S-------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
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----------S---------------------------------------S-----------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------S-------------S---------------
-----------------------------------------S------------------------------S-------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------S----------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----S--S---------------------------------S---------------------------S--
--------S--------S---------S------------------------S----------SS---------------
------------------------S-------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
----S--S---S--------S-S-------------------------------------SSSSSSS-------S-----
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------------------------------S----------------------------S-
--------------------S------------------------------S---------S--------S--S------
---S--SS------S---------------------------------------------------------------S-
------------------S----------S--------------------S--S--------------------------
-----SS--------------S---------------S---------------------SS-------------------
-------------------------------------------S------------------------------------
-S---------SSS---------------S-------------S----S-------------------------------
--------S-------------------------------------S-------SSSSS---S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------S--------------S--------S---
-----------------S-------S------------------------------------------------------
---------S----------------------------------------------------------------------
--------------S----------------------------------------------------S-S----------
---------------S----------------------------------------------------------------
------S----------S-------------------------------S------------------------------
----------------------S-----------S--S-------S----------------------------------
-------------------------------------------------------S------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------------------------S-------
--------------------------------------------------------------------------------
-------------------------------------------------------S---------------------S--
----------------------------------S---------------------------------------------
----------------------------S---------------------------------------------------
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------
>forward_253
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-------------------------------------------------------------------------CAACACC
TGCACCCATCACT-------------------------------------------------------------------
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>reverse_2261
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--------------------GAATTCCATGGCGCAATGCT----------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1625
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCTGGATGGCTTGATGCAGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3028
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCCAAGGCTTGAA
GGGAACT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CCTCATCACAGGCATGCAGT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTTTCTGCACTGACACAGCTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
