>input_sequence_35730
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---------------------------CTCGCACCTCTCCACCATCACCTGCGCCGCTCTCTCTCCGCCGTCGCCCCTCC
GCCCCACGAGCCGCCCCCTCCCCATCCCGCCCCACCGCCACAGCCGGCCTCCAACAAGCACAAGCTCTTCGTCGCCGGTA
CCACTCCACCCTCCTGCCCCCGTTTACTTCTTCCCCAATCATTCCCTGGCTCTCACCTCAGTTTGCCTCGTTTGCTTGCG
AGCATGGGCAGGGCTCTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAG
GTAAA-GACCAATCCACATGCAAACCAAAGCCATTTCTCATTTGGTCGGTAGCAATATAACCTCTCGCGTGCTGGGTGCT
GGGCGGGTTCAGATGGTGCGCGTGGTAGGTGCTCGACGAAACGGCTCCCAGG---TCCTGGACGACCTGGTTCCGCCCAG
CCTCGCGAACTGTTCGACAGAATGCCTGTTAGGGACGTGGTTGCCTTCTCGGCGGCAATCTACCGGAATGCGAGGGCCGG
GTCGTTCGATGAGGCCGTTGGGCTGTTTGTCGGCATGGTGAGGGCAGGAGTGTGCCCAAACTCGTTCACCTTGGTCAGTG
CATCGCTCGCTGCGGCCGGGCTGGGTGACGCCGTGCTCACCGAGTGCATCCATGGGTGGGTTGTCAAGCTTCGGTTGGAC
TCCAATCCTTTTGTCCGAACCGCGTTGCTTGATTCATATGCGAAATGCGGCTGCCCCATCAAGGCACGTGCTTTGTTTGG
TGAAATGAGGGATCCAGGTATAGTTACCTGGAATGCGATGATCTCCGGGTTAGTGCACAATGATTTGTTCGAGGAGGCAG
TGCTGGTGTTTAAAAGGTTGCTTCATTCGTTGGGGCCAATTGATAATGTTGTGACTATGATAAGCACTGCTCAAGCTTGT
GCTGGTTGTGGTGATGTTGGACTGTGTGGGACTGCACATGCTTACGCAGTTAAGATGGGGCTTGATTTGGATGTATCAGT
GACAAACTCGATACTGGGCATGTACTTGAGTTTTGTTAGCCTTGAGATTGGAAGAGAGATTTTCAGGAAGGTTCCTGTCA
ACAATGTTGTTAGTTGGACGATGATGATGGGTTTCCTTCTTGAAAAAGGGCATGCTGGTGAGGTTATATGTATGTTTGTC
AAGATGAGGTCAAATGGTATAGTCCCTGACATGGTATCAATGGTTGGTTTGGTGCAAGCTTGTGCACTTATGGGTGATGG
AAGCAGAGGAAAGTTGGTTCATAACCAGATTGTGATCCGTGGGTTTAGTAGAGAGCTTCCTGTAGTGAATTCATTAATCA
CAATGTATTCCAAATGTAAGGATTTAAGCTCTGCAAGGAAGTTGTTTGATGGAAGAAGGGATAAGAGCTTGGTCTCATGG
ACTGCAATGGTGGCGGCGTGTGTAGAAAATGGAGATGTGCTAGAAGGATTGGATCTCTTTGCTAAGATGAGGCATGGAGG
CTTGTTTGCGATTGATTATGTAACGTTAGTCACCTTATTGCTCGCCTGTTATGTGATTGCTAAGTTTGATCTGTGTGTTC
AGCTTCATGGGTATAGCTACAAGTCAGGTTTGTCTTTGTACAGACCTGTTCTTAACACCCTTATGGCAGTTTATGGTAAG
TGTGGATATGTGGCTCTAGCCCAAAAATTGTTTGATGAGATGATTTGTCGAGACACTGTCTCGTGGAATACTATGATATT
ATCCTTTGGTATAAATGGCCAAGGAGAGGAAGCAATAACACTTTTTAATGAGATGGAGAAATCTAGCGAGGGCCGAGACA
GTGTAACATACTTGAACACATTGCTAGCATGCAGCCATTCTGGCCTGGTGGATGATGGGTTGATCATCTTTAGAAGAATG
ATAAACGATAAGGGCATAAATCCATGTCAGGAGCACATTGGATGCATAGTGGATATGTTAGCAAGAGCTGGCCGCTTGGA
CGAAGCAGCAGGAGTGGCTAGCTTGACTGACAATAAATTGGGACTAAATGCTTGGAAAGCCCTTATGGGAGGGGGTCATT
TGCACAGTGACATGAAGTTCACTAATGTTGCTGCGGAGAAGGTGCTTACAGTGGAATCATTTGATTATGGACACGTGTTG
TTACTTTCTAACACTTATGCATCACTTGGGAAATTCAGTGCTGCTGAATCTGTCAGATCCTGTTATACAAAACAGATCGC
AAAGAAAACTCTGGGGCTTAGTTCAATTTAG-------------------------------------------------
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--------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G414500
GACGAGGCCTAGGGCTACAAAGAGACCTAGTCGACTATGGCGGTTGAGGAGCCCTCCTCGAAATTGAAGGTATGCAAATT
ATACTCCATCTCCTTTGAAATATAAGGCGCATATGTCTCTAAGATTTGCTTTTGATGAACGATCAGTCTATGGTTTTCCT
AGATAAGTTTGATACCACCGAAAAATACTTCTTAATACAAATCCAATTTGTATACTTTTTTCATTATGTATCATGTAGTC
CACTTATTATTGAATAAATTCTGGATCAAAGATAAAGTTTGGAAAGCATATGCACCTTATGCTTCTGGACAAACGGTGTA
TATATGAACATAAGACCATGCTGGTAATGGTTGATGTTAACATAAGTACATGTTTTATAAAAGTGTTTGAGATTTAATTT
TCAGGCAACCTATGAACAAATAATACACAAATTTTGAAACCAAACCTCCTATTCGCGGCGAGCAAAAAATACGCTTATCA
TACA-TTTTTGTGACAAAATTAAAACCACTAAAATCACATCTAGAGAGAACCCATGAAAATTAAAATCATAAAAGAGCAT
TAGTAAGCACTATGACATCATGATGGTGGTGCTAAAACC-----------------------------------------
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-------------------------------------------------------------------------------T
GTTCTTAAACCCAACTGGTCAAGGCA------------------------------------------------------
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----------------------------------------------------AAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGCACCTCTCCACCATCACCTGCGCCGCTCTCTCTCCGCCGTCGCCCCTCC
GCCCCACGAGCCGCCCCCTCCCCATCCCGCCCCACCGCCACAGCCGGCCTCCAACAAGCACAAGCTCTTCGTCGCCGGTA
CCACTCCACCCTCCTGCCCCCGTTTACTTCTTCCCCAATCATTCCCTGGCTCTCACCTCAGTTTGCCTCGTTTGCTTGCG
AGCATGGGCAGGGCTCTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAG
GTAAA-GACCAATCCACATGCAAACCAAAGCCATTTCTCATTTGGTCGGTAGCAATATAACCTCTCGCGTGCTGGGTGCT
GGGCGGGTTCAGATGGTGCGCGTGGTAGGTGCTCGACGAAACGGCTCCCAGG---TCCTGGACGACCTGGTTCCGCCCAG
CCTCGCGAACTGTTCGACAGAATGCCTGTTAGGGACGTGGTTGCCTTCTCGGCGGCAATCTACCGGAATGCGAGGGCCGG
GTCGTTCGATGAGGCCGTTGGGCTGTTTGTCGGCATGGTGAGGGCAGGAGTGTGCCCAAACTCGTTCACCTTGGTCAGTG
CATCGCTCGCTGCGGCCGGGCTGGGTGACGCCGTGCTCACCGAGTGCATCCATGGGTGGGTTGTCAAGCTTCGGTTGGAC
TCCAATCCTTTTGTCCGAACCGCGTTGCTTGATTCATATGCGAAATGCGGCTGCCCCATCAAGGCACGTGCTTTGTTTGG
TGAAATGAGGGATCCAGGTATAGTTACCTGGAATGCGATGATCTCCGGGTTAGTGCACAATGATTTGTTCGAGGAGGCAG
TGCTGGTGTTTAAAAGGTTGCTTCATTCGTTGGGGCCAATTGATAATGTTGTGACTATGATAAGCACTGCTCAAGCTTGT
GCTGGTTGTGGTGATGTTGGACTGTGTGGGACTGCACATGCTTACGCAGTTAAGATGGGGCTTGATTTGGATGTATCAGT
GACAAACTCGATACTGGGCATGTACTTGAGTTTTGTTAGCCTTGAGATTGGAAGAGAGATTTTCAGGAAGGTTCCTGTCA
ACAATGTTGTTAGTTGGACGATGATGATGGGTTTCCTTCTTGAAAAAGGGCATGCTGGTGAGGTTATATGTATGTTTGTC
AAGATGAGGTCAAATGGTATAGTCCCTGACATGGTATCAATGGTTGGTTTGGTGCAAGCTTGTGCACTTATGGGTGATGG
AAGCAGAGGAAAGTTGGTTCATAACCAGATTGTGATCCGTGGGTTTAGTAGAGAGCTTCCTGTAGTGAATTCATTAATCA
CAATGTATTCCAAATGTAAGGATTTAAGCTCTGCAAGGAAGTTGTTTGATGGAAGAAGGGATAAGAGCTTGGTCTCATGG
ACTGCAATGGTGGCGGCGTGTGTAGAAAATGGAGATGTGCTAGAAGGATTGGATCTCTTTGCTAAGATGAGGCATGGAGG
CTTGTTTGCGATTGATTATGTAACGTTAGTCACCTTATTGCTCGCCTGTTATGTGATTGCTAAGTTTGATCTGTGTGTTC
AGCTTCATGGGTATAGCTACAAGTCAGGTTTGTCTTTGTACAGACCTGTTCTTAACACCCTTATGGCAGTTTATGGTAAG
TGTGGATATGTGGCTCTAGCCCAAAAATTGTTTGATGAGATGATTTGTCGAGACACTGTCTCGTGGAATACTATGATATT
ATCCTTTGGTATAAATGGCCAAGGAGAGGAAGCAATAACACTTTTTAATGAGATGGAGAAATCTAGCGAGGGCCGAGACA
GTGTAACATACTTGAACACATTGCTAGCATGCAGCCATTCTGGCCTGGTGGATGATGGGTTGATCATCTTTAGAAGAATG
ATAAACGATAAGGGCATAAATCCATGTCAGGAGCACATTGGATGCATAGTGGATATGTTAGCAAGAGCTGGCCGCTTGGA
CGAAGCAGCAGGAGTGGCTAGCTTGACTGACAATAAATTGGGACTAAATGCTTGGAAAGCCCTTATGGGAGGGGGTCATT
TGCACAGTGACATGAAGTTCACTAATGTTGCTGCGGAGAAGGTGCTTACAGTGGAATCATTTGATTATGGACACGTGTTG
TTACTTTCTAACACTTATGCATCACTTGGGAAATTCAGTGCTGCTGAATCTGTCAGATCCTGTTATACAAAACAGATCGC
AAAGAAAACTCTGGGGCTTAGTTCAATTTAGGCCATGCCATCCATGATCCATCACAAGGCAGCTGAAGAGTACTTCCCTG
GGAAGGGCAAGG--ATATATCACACAAGGACCACCAGTCTCAAGCTATTGGAATCTATTTTGGGCATTAATGTTTGAATT
TTACTTTGTCAAATGGTT-AGTCTACTGTGAAGTGTGAACAATGGATGAGCATCAGCATTAGGTTTCAAAAGGCTCAGGT
GCAATAGTGGATTGCCTCGGACCCTTGGCCATTGGGTCTTAAGTCTTGTGATTAACAGTCGGCTCAGCCTTTTGACACAT
GAATGTGGAGTTCGTCAGACGGTATTCTGACCACTTAGAAGAGTTGTTAAGCACACCTCAAATTTTCATTACTTTCTTTT
GTTTATGGACATTTTCCTTTACATATGGGTTGGAATATATCTGGTTAGAACTTGGAGTCCCAATCTTACTAACCTCTAGT
TGGCTTGATTGGCATCTGTATCAATCACTCTGGAGCTGGTCCTGAAAACACGTGTGCTGATTGCAACAACTCCAAAGAAA
AGGAGAGTGAATAGCAGCAACATCAACAAGACAACAATGTACATTCACAGTAATATATATGTTGGTAGAGGAAGCTGCAA
CTACCAGCTGTGTGCTGTGCGTAGTATCTAATTACTTTTGAGTAAGATGGTTGGCTGCACTTCATTATGTAATTCATGAA
CAAACAATTAGCTCCTAGACAATTCAAAAATACATAAGTTGGATTTGCTTGAAATATTTGATAATTCATATTTTTATATC
TGCATCCATTGATCAGGTTAACTGGATCCAAGTATTTCTGCTACTACTTGCAATTTCTTTTGGCAGTCCCTATGTATCAG
CTGATTTTGAGTTATTACTTCTGAATTGGGTGTTCATGAATCTAGTTGCGCCCTTTCTTCCTAAAAGGCGATATAATTCA
TGCATATTGCTCTTGCAGTACCGACAGATCCTATACTTCTGATGTGTTGATACTAAGACTCTAAGAGGTAGCCA
>chr3A_1
GACGAGGCCTAGGGCTACAAAGAGACCTAGTTGACTATGGCGGTTGAGGAGCCCTCCTCGAAATTGAAGGTATGCAAATT
ATACTCCATCTTTTTTGGAATATAAGACGCATATGTCTCTAAGATTTGCTTTTGATGAATGATTAGTCTATGGTTTTCCT
AGATAAATTTGATACCACCGAAAAATACTTCTTAATACAAATCCAATTTGTATACTTTTTTCACTATGTATCATGTAGTC
CACTTATTATTGAATAAATTTTGGATCAAAGATAAAGTTTGCAAAGCATATGCACCTTATGCTTTTGGAGAAATGGTGTA
TATATGAACATAAGACCATGATGGTAATGGTTGATGTTAACA----TACATGTTTTATAAAAGTGTTTGAGATTTAATTT
TCAGGTAACCCATGAATAAACAATACGCAAATTTT-AAACCAAACCTCCTATTCGCGGTGAGCAAAAAATACGCTTATCA
TACATTTTTTGTGACAAAATTAAAACAACTAAAATCAATG-TAGAGAAAACCCATGAAAGTTAAAATCGAAAAAGAGCAT
TAGTAAGTACTACGATATCATGATGGTGATGCTAAAACCAGGGTAGGCC-AACGGGCCGACCCGGCCCGGCATGGCCCAA
CCCATCGTAATCGGTCCGGCCCGGCACAGGATGGCCCAACCCATCATAATCGTGCCTGTCACGGCTTGGCTAGGTGTGGC
GCGATTATTAGCCGGGCCATGCCTTTCCGGCCTACGTGTTGGCCCCTCCAGCCCAGGTACAACCCAGAAGCTATGCGAGC
CGGCCCGCGGCATGCCAGGCCTGTTAGGCTGGTGACCTGTTAGGTTGTTATTGGGCTATTTTTCAGCCATATATATTTAA
AAAAATCCTAAATAAGAATTAAATAAATAAATGGGCCGTGTCGTGCTGACCTGTGTGCTCATACTTCAGGCCCAGGCACG
GCCCCTGGCGTGCCGTGCGGGTGTCCTACCGGGCCGGCCCGACTATCCCAGCCCGTTTGCCCAGCTTTGGCTAAAACATC
ATTCTTAAACCCAACTGGTCAAGCCGAATAAGGAAGGATCCTTCAGATATCTAAAGGACAGAATTTGGAAGCGTGTCCAA
GGGTGGATGGAGAAGTGCTTATCAGCGGGAGGTAAAGAAGTGCTAATAAAATCAGTGGCTCAATCTATTCCTACATATTC
GATGGCGTGCTTTAAACTACCACGGGGGCTTTGTGAACACATCAATGGCATAATTCGGAAGTTTTGGTGGGGAAGTAGGA
ATGGACAAAGGAAAACAGCTTGGGTGTCATGAAATACAATGACTAAACCAAAATTTATGGGAGGTTTAGGCTTTCGGGAT
GTCGAGCTTTTCAACTTGGCTCTACTTGCCCGCCAAGCCTGGAGATTATTAAACGAACCTGAGACGTTGAGCGCACGGGT
CCTTAGAGCCCGCTATTACCCTAATGCAAACATCCTTGAAGCTACTTTGGGTCAGCCCCCCTCCTAGGTCTGGCGTTCGC
TTTTGGAAGGGAGGGATGTTTTGTCTCTTGGGCTGATTAAAAGAATTGGTTCAGGTTCGACTACCAGGATCTGGTTTGAC
AACTGGATACCAAGGGACTACAAACTACGACCGATCTGTGCTAAAACAGCTAACCCACCTTTGTTGGTGTCGGAACTCAT
TAATCCCATGACCCGCTCTTGGGATAGGAAAACCCTCATGGATCAGTTTATTGCTCCGGACATTGAAGTGATCCTCAACA
TACCCATCAGCAATCGGGTTCAGGAGGACTTCTGGGCTTGGCACTATGACCGGTGTGGTGTTTTCTCAGTCCGATCAGCG
TACCGGATGATTACGACAATCAAGGCCCAGAGGAAAGATTGGCTCGAGCACCGGTCGAGACACTCCAACGGTGCAGTTGA
CAGGAGTTCATGGACACAGTTGTGGAAAGTAAAAGTACCATCCAAAATTCGCGTTTTCATGTGGCGGCTCGGGCACACCT
CGCTTCCCACGGGACTGGTCGACACAAGAGGAAGATGGCAGACAACCCTGTCTGTTCTATATGTAATGCGGAGGAAGACT
CATGGAGACACTCACTTGTAAGTTGTTGAGTGGCCAGGTGCGTTTGGGCTCTGGGTGATGATGAACTACTTGAGCATGTG
ATATCGAACCACAACGAAGATGCTAGGCTATGGCTATTCTGGCTTTTCGAGACCACAAACCAACACGACCTTGCGCGCGT
TCTGGTGACCATGTGAGCGATATGGTGGGCTAGATGGAAGGCTATCCATGAAGATGAATTTCAGAGTCCGTTAACAACAA
TGTGTTTCATAAAGAGGTATTTGGAAGACCTAGAGATTGCAGCAGTCAGAACGCCAAGTCGAGAGTTGGGGCGAGTGGAG
CGGCCCCGTGCTAGGGCTTGGCTACCACCGTCGGGTGAGGCTTCAAAGCTGAATTGTGATGGCGCTATTTCCACTTTGGG
AGAAAGAGGAGTTGCTGCAGTGGTTTGTAGGAACAAGGCCGAAAACTATCTGGGAGCCTCAGCAGTGGTGTATGAAGGCT
TGATCGATCCAGCTAGCCTGGAGGCGCTAGCTTGCAGCGAGGCTCTAGCCCTCGCTCGGGACCTAAATTTGCAGGACTTG
GAGATAGCTTCAGACTGTCAGAAAGTGATCTCAAACATCAAGAATGGAGGGTCGCCGGCTTATGCTCCTATTCTTAGGGA
GATTCAATTTAGTAGAATTTTTTCCTGCTGTTATTTTCCGTTTCGAGCATAGGGAGAATAATTTCGAGGCCCACTCGCTA
GGTAAAGGAGCTGCGTCTCTTGTGGTGGGTCGCCATGTGTGGCTAGGGGTTTTGCACGACATCGTTTGTATTCCTCAGTT
TTTGAACTTTGAATAAAACCCCAGTTATCCTAAAAAAAAACTGGTCAAGCCCAAAAAACAAGCCCAACTCGGCAACTCGA
AGTCCCCCCGATATACCCCCCTGCAGCCTTGCTGTAGAATTGTACCCCGTGCTCGTCTCTGTTCTGTTGGCCAGCCGTCC
GCCCGTCACCGGCCCCGCCGGCATGGCGCTCCCGGAACTGCTCTCGCGCCTGCGC-------------------------
--------------------------------------------------------------------------------
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---------------------------CTCGCACCTCTCCACCATCACCTGCGCCGCTCTCTCTCCGCCGTGGCCCCTCT
GCCCCACGAGCCGCCCCCTCCCCATCCCGCCCCACCGCCACAGCCGGCCTCCAATAAGCACAAGCTATTCGTCGCCGGTA
ACACTCCTCCCTCCTGTCCCCGTCTACTTATTCCCCAATCGGCCATTGTCACTCACCTCGGTTTGCCTCGTTTGCTTGCG
AGCATGGACAGGGCTCTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAG
GTAAAAGACCAATCCACATGCAAACCAAAGCCATTTCTCATTTGGTCGGTAGCAATATAACCTCTCGAGTGGTGGGTGCT
GGGCGGGTTCAGATGGTACGCGTGGTAGGTGCTCGACGAAACGGCTCCCAGGCCCTCCTGGACGACCCGGTTCCGCCCAG
CCTCGCGAACTGTTCGACAGAATGCCTGTTAGGGACGTCGTCGCCTGCTCGGCGGCAATCTACCGGAGTGCGAGGGCCGG
GTCGTTCGACGAGGCCGTTGGGCTGTTTGTCGGCATGGTGAGGGCAGGAGTGTGCCCAAACTCGTTCACCTTGGTCGGTG
CATCGCTCGCCGCGGCCGGGCTGGGTGACGCGGTGCTCACCGAGTGCATCCATGGGTGGGTTGTCAAGCTTCGGTTGGAC
TCCAATCCTTTTGTCCGAACCGCGTTGCTTGATTCATATGCGAAGTGCGGCTGCCCCATCAAGGCACGTGCTTTGTTTGG
TGAAATGAGGGATCCAGGTATAGTTACCTGGAATGCGATGATCTCCGGGTTAGTGCATAATGATTTGTTCGAGGAGGCAG
TTCTGGTGTTTAAAAGGTTGCTTCATTCGTTGGGGCCAATTGATAATGTTGTGACTATGATAAGCACTGCTCAAGCTTGT
GCTGGTTGTGGTGATGTTGGACTGTGTGGGACTGCACATGCTTACACGGTCAAGATGGGGCTTGATTTGGATGTATCAGT
GACAAACTCGATACTGGGCATGTACTTGGGTTATGCTAGTCTTGAGATTGGAAGAGAGATTTTCAGGAAGATTCCTGTCA
ACAATGTTGTTAGTTGGACGATGATGATGGGTTTCCTTCTTGAGAAAGGGCATGCCGGTGAAGTTATACATATGTTTGTC
AAGATGAGGTCAAATGGTATAGTTCCTGACATGGTAGCAATGGTTGGTTTGGTGCAAGCTTGTGCACTTATGGGTGATGG
AAGCAGAGGAAAGTTGGTTCATAACCAGATTGTAATCCGTGGGTTTAGTAGAGAGCTTCCTGTAGTGAATTCCTTAATCA
CAATGTATTCCAAATGTAAGGATTTAAGCTCTGCAAAGAAGTTGTTTGATGGAAGAAGAGATAAGAGCTTGGTCTCATGG
ACTGCAATGGTGGCGGCGTGTGTAGAAAATGGAGATGTGCTAGAAGGATTGGATCTCTTTGCTAAGATGAGGCATGGAGG
CTTGTTTGCGATTGATTATGTAACGTTAGTCACCTTATTGCTTGCCTGTTATGTGATTGCTAAGTTTGACCTGTGTGTTC
AGCTTCATGGGTATAGCTACAAGTCAGGTTTGTCTTTGTACAGACCTGTTCTTAACACCCTTATGGCAGTTTATGGTAAG
TGTGGATATGTGGCTCTAGCCCAAAAATTGTTTGATGAGATGATTTGTCGAGATACTGTCTCGTGGAATACTATGATATT
ATCCTTTGGTATAAATGGCCAAGGAGAGGAAGCAATAACACTTTTTAATGAGATGGAGAAATCTAGCGAGGGCCGAGACA
GTGTAACATACTTGAACACATTGCTAGCATGCAGCCATTCTGGCCTGGTGGATGATGGGTTGATCATCTTTAGAAGAATG
ATAAACGATAAGGGCATAAATCCATGTCAGGAGCACATTGGATGCATAGTGGATATGTTAGCAAGAGCTGGCCGCTTGGA
CGAAGCAGCAGGAGTGGCTAGCTTGACTGACAATAAATTGGGACTAAATGCTTGGAAAGCCCTTATGGGAGGGGGTCATT
TGCACAGTGACATGAAGTTCACTAATGTTGCTGCGGAGAAGGTGCTTACAGTGGAATCATTTGATTATGGACACGTGTTG
TTACTTTCTAACACTTATGCATCACTTGGGAAATTCAGTGCTGCTGAATCTGTCAGATCCTGTTATACAAAACAGATCGC
AAAGAAAACTCTGGGGCTTAGTTCAATTTAGGCCATGCCATCCATGATCCATCACAAGGTAGCTGAAGAGTACTTCCCTG
GGAAGGGTAAGG--ATATATCACACAAGGACCACCAGTCTCAAGCTATTGGAATCTATTTTAGGCATTAACGTTTGAATT
TTACTTTGTCAAATGGTT-AGTCTACTGTGAAGTGTGAACAATGGATGAGCATCAGCATTAGGTTTCAAAAGGCTCAGGT
GCAATAGTGGATTGCCTCGGACCCTTGGCCATTGGGTCTTAAGTCTTGTGACTAACAGTCGGCTCAGCCTTTTGACACAT
GAATGTGGAGTTCGTCAGACGGTATTCTGACCACTTAGAAGAGTTGTTAAGCACACCTCAAATTTTCATTACTTTCTTTT
GTTTATGGCCATTTTCCTTTACATATGGGTTGGAATATATCTGGTTAGAACTTGGAGTCCCAATCTTACTAACCTCTGGT
TGGCTTGATTGGCATCTGTATCAATCACTCTGGAGCTGGTCCTGAAAACACGTGTGCTGATTGCAACAACTCCAAAGAAA
AGGAGAGTGAATAGCAGCAACATCAACAAGACAACAATGTACATTCACAGTAATATATATGTTGGTAGAGGAAGCTGCAA
CTACCAGCTGTGTGCTGTGCGTAGTATCTAATTACTTTTGAGTAAGATGGTTGGGTGCACTTCATTATGTAATTCATGAA
CAAACAATTAGCTCCTAGACAATTCAAAAATGCATAAGTTGGATTTGCTTGAAATATTTGATAATTCATATTTTTATATC
TGCATCCATTGATCAGGTTAACTGGATCCAAGTATTTCTGTTGCTACTTGCAATTTCTTTTGACAGTCCCTATGTATCAG
CTGATTTTGAGTTATTACTTCTGAATTGGGTGTTCATGAATCTAGTTGCGTCCTTTCTTCCTAAAAGGCGATATAATTCA
TGCATATTGCTCTTGCAGTACCGACAGATCCTATACTTCTGATGTGTTGATACTAAGACTCTAAGAGGTAGCCA
>chr3B_334
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-------------GACAATGGTGGTAATGATTGATATTAACA----TACATGTTTTATAAAAGTGTTTGAGATTTATTTT
TCATGCAACCCATGAATAAACAATACGCAAATTTT-AAACCAAACCTACGGTTCGCGGCGAGCAAAAAATACGCTTATCA
TACATTTTTTTA-ACAAAATTAAAACCACTAAAATCAATG-TAGAGAAAACCCATGAAAATTAAAACCGAAAAAGAGCAT
TAAGAAGTACTACGACATCATGATGGTGATGCTAAAACCAGAGCTGGCCAAACAGGCCGGCCCGGCACGGCATGGCCCAG
CCCATCGTAATTGGGCCGGCCCGGTACAGGATGGCC--ACCCATCGTAATCGTGCCTGACACGGCCTGGCCAGCCATGGC
ACGATTATTAGCCTGGGCGTGCCGTGCCGGCCCACGTGTTGCCCCCTCCAGCCTAGGTACGACCTAGAAGCTATGCGGAC
CGACTCGCAGCATGCCAGGCCTGTTAGGCTGGCGGCCTGCTAGGTTGTTATTGGGCTATTTTTCGGCCATATATATTAAA
CAAAATCTTAAATTAAAATTAAATAAATAAATGGCCCGTGCCGTGCCGGCCCGCGTGCTCATCCTTGAGGCCCATGCACA
ACCCCTGGCGTGCTGTGCGGGCATCCTATCGGGCCGGCCCTGCTACCCCAGCCCGTTTGGCCAGTTTTGGCTAAAACATT
GTTCTTAAACCCAACTGGTCAAGCTA------------------------------------------------------
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----------------------------------------------------AAAAAACAAGCCCAACCCGTCAACCCGT
CAACCCGTCAGCCC-----------------------AATTCTACACCGTGCTCGTCTCTGTTCTGTTGGCCAGCCGTCA
GCCCGTCACCGACCCCGCCGGCATGGCGCTCCTGGAACTGCTCTCGCGCCTGCGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CTCGCACCTCTCCACCATCACCTCCGCCGCTCTCTCTCCGCGGCCGCCCCTCC
ACCACACGAGCCGCCCCCTCCCCATCATGCCCCACCGTCACAGCCGGCCTCCAACAAGCACAAGCTCTTCGTCGCCGGTA
ACACTCTTCCCTCCTGTTCCCCTTTACTTATTCCCCAATCATTCCCTGGCTCTCACCTCAGTTTGCCTCGTTTGCTTGCG
AGCATGGGCAGGGCTCTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAG
GTAAAGGACCAACCCACATACTAGCTAAAGCCATTCCTCATTTGGTCGGTAGCAATATAACCTCTCGCGTGGTGGGTGCT
GGGCGGGTTCAGATGGTGCGCGTGGTAGGTGCTCGACGAAACGGCTCCCAGG---TCCTGGACGACCTGGTTCCGCCCAG
CCTCGCGAACTGTTCGACAGAATGCCTGTTAGGGACGTGGTTGCCTTCTCGGCGGCAATCTACCGGAATGCGAGGGCCGG
GTCGTTCGACGAGGCCGTTGGGCTGTTTGTCGGCATGGTGAGGGCAGGAGTGTGCCCAAACTCGTTCACCTTGGTCGGTG
CATCGCTCGCCGCCGCCGGGCTGGGTGACGCCGTGCTCACCGAGTGCATCCATGGGTGGGTTGTCAAGCTTCGGTTGGAC
TCCAATCCTTTTGTCCGAACCGCGTTGCTTGATTCATATGCGAAATGCGGTTGCCCCATCAAGGCACGTGCTTTGTTTGG
TGAAACGAGGGATCCAGGTATAGTTACCTGGAATGCGATGATCTCCGGGTTAGTGCACAATGATTTGTTCGAGGAGGCAG
TGTTGGTGTTTAAAAGGTTGCTTCGTTCGTTGGGGCCAATTCATAATGTTGTGACTATGATAAGCACTGCTCAAGCTTGC
GCTGGTTGCGGTGATGCTGGACTATGTGGAACTGCACATGCTTACACGGTCAAGATGGGGCTTGATTTGAATGTATCAGT
GACAAACTCGATACTGGGCATGTACTTGGGTTTTGCTAGTCTTGAGATTGGAAGAGAGATTTTCAGGAAGATTCCTGTCA
ACAATGTTGTTAGTTGGACGATGATGATGGGTTTCCTTCTTGAGAAAGGGCATGCTGGTGAAGTTATATGTATGTTTGTC
AAGATGAGGTCAAACGGTATAGTTCCTGACATGGTATCAATGGTTGGTTTGGTGCAAGCTTGTGCACTTATGGGTGATGG
AAGCAGAGGAAAGTTGGTTCATAACCAGATTGTAATCCGTGGGTTTAGTAGAGAGCTTCCTGTAGTGAATTCATTAATCA
CAATGTATTCCAAATGTAAGGATTTAAGCTCTGCAAGGAAGTTGTTTGATGGAAGAAGGGATAAGAGCTTGGTCTCATGG
ACTGCAATGGTGGCGGCGTGTGTAGAAAATGGAGATTTGCTAGAAGGATTGGATCTCTTTGCTAAGATGAGGCATGGAGG
CTTGTTTGCGATTGATTCTGTAACGTTAGTCACCTTATTGCTCGCATGTTATGTGATTGCTAAGTTTGACCTGTGTGTTC
AGCTTCATGGGTATAGCTACAAGTCAGGTTTGTCTTTGTACAGACCTGTTCTTAACACCCTTATGGCAGTTTATGGTAAA
TGTGGATATGTGGCTCTAGCCCAAAAATTGTTTGATGAGATGATTTGTCGAGACACTGTCTCATGGAATACTATGATATT
ATCCTTTGGTATAAATGGCCAAGGAGAGGAAGCAATAACACTTTTTAATGAGATGGAGAAATCTAGCGAGGGCCGAGACA
GTGTAACATACTTGAACACATTGCTAGCATGCAGCCATTCTGGCCTGGTGGATGATGGGTTGATCATCTTTAGAAGAATG
ATAAACGATAAGGGCATACATCCATGTCAGGAGCACATTGGATGCATAGTGGATATGTTAGCAAGAGCTGGCCGCTTGGA
CGAAGCAGCAGGAGTGGCTAGCTTGACTGACAATAAATTGGGACTAAATGCTTGGAAAGCCCTTATGGGAGGGGGTCATT
TGCACAGTGACATGAAGTTCACTAACGTTGCTGCGGAGAAGGTGCTTACAGTGGAATCATTTGATTCTGGACACGTGTTG
TTACTTTCTAACACTTATGCATCACTTGGGAAATTCAGTGCTGCTGAATCTGTCAGATCCTGTTATACAAAACAGATCGC
AAAGAAAACTCTGGGGCTTAGTTCAATTTAGGCCATGCCATCCAT-------CACAAGGTAGCTGAAGAGTACTTCCCTG
GGAAGGGTAAGGATATATATCACACAAGGACCACCAGTCTCAAGCTATTGGAATCTATTTTAGGCATTAACGTTTGAATT
TTACTTTGTCAAATGGTTAAGTCTACTGTGAAGTGTGGACAATGGATGAGCATCAGCATTAGGTTTCAAAAGGCTCAGGT
GCAATAGTGGATTGCCTCGGACCCTTGGCCATTGGGTCTTAAGTCTTGTGACTAACAATCGGCTCAGCCTTTTGACACAT
GAATGTGGAGTTTGTCAGACGGTATTCTGACCACTTAGAAGAGTTTTTAAGCACACCTCAAATTTTCATTACTTTCTTTT
GTTTATGCCCATTTTCCT-TACATATGGGTTGGAATATATCTGGTTAGAACTTGGAGTCCCAATCTTACTAACCTCTGGT
TGGCTCGATTGGCATCTGTATCAATCACTCTGGAGCTGGTCCTCAAAACACGCATGCTGATTGCAACAACTCCAAAGAAA
AGGAGAGTGAATAGCAGCAACATCAACAAGACAACAATGTACATTCACAGTAATATATATGTTGGTAGAGGAAGCTGCAA
CTACCAGTTGTGTGCTGTGCGTAGTATCTAATTACTTTTGAGTAAGATGGTTGGTTGCACTTCATTATGTAATTCATGAA
CAAACAATTAGCTCCTAGACAATTCAAAAATACATAAGTTGGATTTACTTGAAATATTTGATAATTCATATTTTTATATC
TGCGTCCATTGATCAGGTTAACTGGATCCAAGTATTTCTGCTACAACTTGCAATTTCTTTTGGCAGTCCCTATGTATCAG
CTGATTTTGAGTTATTACTTCTGAATTGGGTGTTCATGAATCTAGTTGCGTCCTTTCTTCCTAAAAGGCGATATAATTCA
TGCATATTGCTCTTGCAGTACCGACAGATCCTATACTTCTCATGTGTTGATAGTAAG-----------------
>SNPs
-------------------------------S------------------------------------------------
-----------SS----S--------S--------------------------------S---S----------------
------S--------------------------------------------------------S----------------
--------------------S--------------------S----------------------S----S---S------
--------------------S---------------------SSSS----------------------------------
----------S-----S---S-----S--------S--------------------------------------------
-------------------------------------SSSS------S--------------------SS----------
-------S----S---------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
S------S--------S------------S--------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------------------------------------------------------S---
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-S--S-----------------------------
----------------------------S------S---S------------------------------S---------
-------------------------------------------S-----------------S------------------
-----------------------S--------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------S-----------------------------------------------------S--------S---------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------S--------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------
>forward_589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCACTATGACATCATGATGGTGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_4444
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------AAAAGGGCATGCTGGTGAGG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_3470
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTCCTGCCCCCGTTTACTTC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_4870
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTGTGTGTTC
AGCTTCATGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_4286
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGGGACTGCACATGCTTACG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_5998
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGT
TGGCTTGATTGGCATCTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
