>input_sequence_35715
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-------------CGCGCC-CCCCAGAAGCCCCGACGCTCAAGCCCCCAGACGCCGCAGCGCCGCCACTCCACCCGCAGC
GGCAACCATGGCGGTCGGCAAGAACAAGCGCATCTCCAAGGGGAGGAAGGGTAGCAAAAAGAAGGCGTGAGTGCCTCCCC
CACCCCGCTCATCCCTTGCAGCATCGTGATCCAGGATCTGTTTCTTCTCCTCTTCTTTCGTCATATGCTGATGTGGTTTC
TTGCCTGGTTTCTCGTGTTTCTGCAGCGTCGATCCGTTCACCAAGAAGCAGTGGTATGACATCAAGGCGCCGCTGCTGTT
CACCAGCCGCAACGTCGGCAAGACCCTCGTGTCCAGGACACAGGGTACCAAGGTATGCTCTACCCGCCCTTGCATCTGTG
CGTGCGGTGTTTGTCACTTTCCTTGATGCCTTCTGTCCCAACGATTAGCTGTTTAGTAGTCTGCCTGCCCTC--ATACGC
GATTGAGATCTATTTAGTCCTATTGGCATGAAACGGATTCAACCATTTTCTCAAAGGTTGCCTTGTTGTGTTAAGCGCTG
CAGGACGTGATAGACTAGCTCTAGAATGCAATCGCTATTTA-------CTG----------------------ATAATTG
ATTTTAGTTCGCGATTTACTATTTTGTCTCACCAATG-TCTCAGTGTTGTAATTTGTGACAA------------------
--------------------------------TTTATTTGTAGTTGTAGTTATAGTCCACTTGTTTTTAAACTAGCACCC
--------------------------AGCATTCAAGTGTTGTTAGTCGTTTGTGTTTGGTCTAACCGATTCCTCTGACTG
TGTTCCTATGTCGTATGTGTAGCAGTAGGCACACTGAATCTCG-TTTTTAAGCCTTTGCATTTACATTCATTTAGGAATT
TGTTCAATGTTTGTTTGTTGTTGTAAAGTTGACTGTATTAGCTAACTGCACAGTTCATCTTTATTTTAGATTGCCTCAGA
GGGTCTGAAGCACAGGGTGTTCGAAGTATCTCTAGCTGATCTTCAGAACGATGAGGACCAGGCCTACAGGAAGATCAGAC
TCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACAAACTTCTGGGTAATGATCTCTCTCGCATTGCCTGAAACCTAA
TGTTGTGTTGTGTTTTTG-CTTTGCTAACCTGTTCTTCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTC
TCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACCACTGACAACTACATGCTCCGCATGTTCA
CCATTGGCTTCACGAAGAGACGCCCAAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAAT
TAGTCCACCTTCCTCCTTTTG-TATCTTTGTATTGATAATGTTTTGGTGATCATTGAGCTGATTGTTAACAACTCTATCT
GTGTTTCTTGCTTGTAGATCCGCCGCAAGATGGTTGAGATCATGGTCAACCAAGCTGCAAGCTGTGACTTGAAGGAGCTT
GTGAACAAGTTCATCCCTGAGGTGATTGGAAAGGAGATTGAGAAGGCCACCTCAAGCATCTTCCCCCTCCAGAACGTGTA
CGTCCGCAAGGTGAAGATCCTGAAGGCCCCCAAGTTTGACCTGGGGAAGCTCATGGAGGTAATTGTCTTGTGGCACCACC
ATGTCTACTGAAAATATT-TTAGCTGGGCAG----------T-GTTAATTGTTGTTCTCCA--GTCTACTGAAGTTCTAA
TGTGACCCATGTTGCCTGTTCCAGGTGCACGGTGACTACAAGGAGGATGTTGGTGTGAAGCTTGACAGGCCTGCTGATGG
AGATGAGGTGATTCCTGGAGCGGAGGAGGTTGCTGCTGCTGAGTAGAAAATAGAAGTCGCTATTTTGCTGCTTCATATCT
AGAAGATGATATATGTGCCACCTGGGTGTCGTGAACTTTGTAGTCAGTTTTGATGGCTGATTTCTTGAGTACTTCTGTCG
ACATTCCTAGCCAGCGTTCAGTTATCTTATTTTGTTCGTGTTACTTT-CTGGATGGAGGTTATGAGTTTAAAACTAAATA
TTTAGTTTATTCCTGCCG-TGTGTGTTTTATGTTTGAATGGAACTTATGCTCTGTTGTTTTGTTAGCTGTATCTCAGTAC
CAACTTTTTGTTCGCGTGCATACGAGATGTTTGCAGCTTGTATGTAATGGCTACAGCTTCTCCTAGCCATGACT-CCCTC
CGTCTTGGAATTACTTGTAGAAGTGACGGGAGGGGAGCATGAAAGTAAAATTAGCAATGTGCT-----------------
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>chr4D_1_TraesCS4D01G260400
CAACTAGAAAAACAAAGTCACGACCCATATAAAACAATGCACATATACCCACACTAGCGCATACACGCAAGACAACGAAA
AAACAACCACCAGCACAACACAAAAAAATGGCCTGAAACGACTCA--------------AGGCACAGTGCACACAAGCAA
GACAATTTTGCACGCATCTTACATGCCTTATCGTGTGGTGAACAACTTTGATGCCACATAGTTAAAAATCATATAGATGA
GAATTAATAAATCCAAAAAACAAAGAAAAGTGTAAAGAAAATAAAATTTAG-AAACAAAACAAAAAACATGATTTTGAAA
ACAAATCAATGGAAAAAGAAACAATAAGTAAA-----TAAAAATAAACAAAAATTTGTAAAAACCCAAAAAAAGCAAAGA
--AAAAAACAAAGTACTAGTTGGAAGCTTCTAGCCCAAAACCGGTACATGAGAGGTCGCGACA----CTCCTATAAAACG
-CCGACTCTTCAGTTCTTTCGCCGTGCCACACTTCATTGCAAAAAAATAAAA---ACACAACAACAAGGGGAGAAACACA
CGCAATCCATACAACCCACAAACACACAAAAAAGCCCATGCGAGATGAACACAAAAAGCAAACATGGCCCGCCAGGAGAC
AAACACGCGCCCGACAGCAGAGACAAACCTTTTGCACGTATATAACAACAACTAATTGCGTGGTGAGGAACTTAGATGTG
CAATACTTAATTCTCATTTTAGCCT-AAAAATAATAATTCTCATATGTGATTTAGCAAAACTGTATTTATTTTCGTCTCT
TCCCTTTGTGTGT---------------------GTGGCAGGCAACCAAAAGAAGAGACGGGCCGAGCCCATGCCATACA
CTATTGGGCCGAGCGGAGTCAGAAGCTTCAACGCAATCTACCCGAAGAGCCCACACGGGCTTCCCCGCATCCCATCCGTC
CATCCACCC-GGCATCCTCGCGACCGCAGGATGGAATGGAAACCCTCGAACCGCACTATATATACTCCCCCTCGGCTGTG
TAGGGTTTCCCCTCGCGCC-CCCCAGAAGCCCCGACGCTCAAGCCCCCAGACGCCGCAGCGCCGCCACTCCACCCGCAGC
GGCAACCATGGCGGTCGGCAAGAACAAGCGCATCTCCAAGGGGAGGAAGGGTAGCAAAAAGAAGGCGTGAGTGCCTCCCC
CACCCCGCTCATCCCTTGCAGCATCGTGATCCAGGATCTGTTTCTTCTCCTCTTCTTTCGTCATATGCTGATGTGGTTTC
TTGCCTGGTTTCTCGTGTTTCTGCAGCGTCGATCCGTTCACCAAGAAGCAGTGGTATGACATCAAGGCGCCGCTGCTGTT
CACCAGCCGCAACGTCGGCAAGACCCTCGTGTCCAGGACACAGGGTACCAAGGTATGCTCTACCCGCCCTTGCATCTGTG
CGTGCGGTGTTTGTCACTTTCCTTGATGCCTTCTGTCCCAACGATTAGCTGTTTAGTAGTCTGCCTGCCCTC--ATACGC
GATTGAGATCTATTTAGTCCTATTGGCATGAAACGGATTCAACCATTTTCTCAAAGGTTGCCTTGTTGTGTTAAGCGCTG
CAGGACGTGATAGACTAGCTCTAGAATGCAATCGCTATTTA-------CTG----------------------ATAATTG
ATTTTAGTTCGCGATTTACTATTTTGTCTCACCAATG-TCTCAGTGTTGTAATTTGTGACAA------------------
--------------------------------TTTATTTGTAGTTGTAGTTATAGTCCACTTGTTTTTAAACTAGCACCC
--------------------------AGCATTCAAGTGTTGTTAGTCGTTTGTGTTTGGTCTAACCGATTCCTCTGACTG
TGTTCCTATGTCGTATGTGTAGCAGTAGGCACACTGAATCTCG-TTTTTAAGCCTTTGCATTTACATTCATTTAGGAATT
TGTTCAATGTTTGTTTGTTGTTGTAAAGTTGACTGTATTAGCTAACTGCACAGTTCATCTTTATTTTAGATTGCCTCAGA
GGGTCTGAAGCACAGGGTGTTCGAAGTATCTCTAGCTGATCTTCAGAACGATGAGGACCAGGCCTACAGGAAGATCAGAC
TCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACAAACTTCTGGGTAATGATCTCTCTCGCATTGCCTGAAACCTAA
TGTTGTGTTGTGTTTTTG-CTTTGCTAACCTGTTCTTCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTC
TCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACCACTGACAACTACATGCTCCGCATGTTCA
CCATTGGCTTCACGAAGAGACGCCCAAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAAT
TAGTCCACCTTCCTCCTTTTG-TATCTTTGTATTGATAATGTTTTGGTGATCATTGAGCTGATTGTTAACAACTCTATCT
GTGTTTCTTGCTTGTAGATCCGCCGCAAGATGGTTGAGATCATGGTCAACCAAGCTGCAAGCTGTGACTTGAAGGAGCTT
GTGAACAAGTTCATCCCTGAGGTGATTGGAAAGGAGATTGAGAAGGCCACCTCAAGCATCTTCCCCCTCCAGAACGTGTA
CGTCCGCAAGGTGAAGATCCTGAAGGCCCCCAAGTTTGACCTGGGGAAGCTCATGGAGGTAATTGTCTTGTGGCACCACC
ATGTCTACTGAAAATATT-TTAGCTGGGCAG----------T-GTTAATTGTTGTTCTCCA--GTCTACTGAAGTTCTAA
TGTGACCCATGTTGCCTGTTCCAGGTGCACGGTGACTACAAGGAGGATGTTGGTGTGAAGCTTGACAGGCCTGCTGATGG
AGATGAGGTGATTCCTGGAGCGGAGGAGGTTGCTGCTGCTGAGTAGAAAATAGAAGTCGCTATTTTGCTGCTTCATATCT
AGAAGATGATATATGTGCCACCTGGGTGTCGTGAACTTTGTAGTCAGTTTTGATGGCTGATTTCTTGAGTACTTCTGTCG
ACATTCCTAGCCAGCGTTCAGTTATCTTATTTTGTTCGTGTTACTTT-CTGGATGGAGGTTATGAGTTTAAAACTAAATA
TTTAGTTTATTCCTGCCG-TGTGTGTTTTATGTTTGAATGGAACTTATGCTCTGTTGTTTTGTTAGCTGTATCTCAGTAC
CAACTTTTTGTTCGCGTGCATACGAGATGTTTGCAGCTTGTATGTAATGGCTACAGCTTCTCCTAGCCATGACT-CCCTC
CGTCTTGGAATTACTTGTAGAAGTGACGGGAGGGGAGCATGAAAGTAAAATTAGCAATGTGCTCCCCCAATTAGTCGCAC
AGAAAGTGAAGGGGAAAAGGGC---ATGGATCGAAACAGCCAATTTGGCGTTCGGTCTTTGAGTCAACACTCGTATTTTC
ATGCGGCTTCCATATTTACTCGTCAGAAGCACCAAGTATTTATTTACTGCAAAATTGGATAGAAATTGATGTATCTAGAA
CTTCAAATATGTCTATACATACCGCAAAATGGATAGAAATTGATGTAGCGACAAGTAATTCGTGATGGA-----------
--------------------GGGAGTATTATATTGTGACAAGGGTTCCCAAACTGCTGTTTCATCAGCAGGTTATTTTGA
AGAGATCAAACTGGTAAGCTGCAATG------AAGAAAA-----------TTGGATAAATCAAAGTTTCAATGAAGTGGC
ACTACTGACTCAAGAGCTACTCTCTCCGTTCGGAATTACTTGTCGCGGAAATGGATGTATCAACATATTTTAGTTTTAGA
TACATCCATTTCCGAGACAAGTAATTCAGAACGGAGGGAGTAGATATCTGTGGAAATCTTTACTCCTTTGAAGGTGAAGC
ACTTTATGTGGCTAGCTATGAATGTTCGCATTCAGTCTGCTGCAGAATTAAGTAAACGTCACTGGGATACTGATTGTATA
CTCTGGTAAGAT-GGAGACATCACAAAACACTCTCTTCACTTGTCCACGGCCCCAGTCAGTGTGGTGCATATCCTTTGCT
TGGATAGCTTCATTCACCAATCTATCATGATCGTCTTCCTCCC-TTTCCTCAACTGAACAGATCCAAGCCTAAACCTCCA
CTGCTTCCATCACTTCACAGAGCAGGTCTCGTTTTAAAACTTTTCGGGTTAAGTGCAGAAAACCAATGAAATGTTCCTCA
AAGAAAACCTGGAGATATTCCTATCTGAAATCCAAAGCACTACTACATCAACTACTGCTTTAACAGTAAAAATCAGGGTT
GGCACCAATAGAGGGCGGTTGCACTGATCTTTATGGATGCAGTGATGTAAAAAGAAAAATCGGCATTTTCATCTAA
>chr4B_1
CAATTAGAAAAACAAAGTCACGCCCTATAAAAAACAATGCACATATACCCACACTGGCGCATACACGCAAGACAATGAAA
AAATGGCCACCGACACGACACAGAAAAATGGCCTGAAACGCAAATGCTAGTGTGACATGAGGCACCGTGCACGCGAGCAA
GACAATTTTGCACAAATCTTACATGCCTGATGGCGTGGTGGACAACTTTGATATGACATAGCTAAAAATCATATAGATGA
GAATTAACAAATCCAAAAAACAAA--AAAATGCAAAGAAAATAAAATTTAGAAAACAAAACAAAAAACATGAGTTTGAAA
ACTAATCAATGGGAAAAAGAAACAAGAAACGCCAAATAAAAAAAGAACAAAAATTTGTAAAACCCCCAAAAAAGAAAAGG
AGAAAAAACAAAATACAAGTTGGAAGCTTCTAGCCCAAAATCGTTACATGAGAGGTCGCAGGTACACCTCCTATAAAAGG
TCCGACTCTTCAGTTCATTCGTCGTGCCACACTTCGTTGCAAA---AAGAAAAACCCACAACAACAAGGTGAGCAACACA
TGCAACCCATATAACCCACAAA-ACACAAAAATGCCCATGCGAGATGAACACAAAAAGCAAACATGGCCCGCCAGGATAC
AAACACGAGCCCGACAGCAGAGGCAAACCTTTTGCACGAATCTAGCAATAACTAATTGCGTGGCGACGAACTTAGATGTG
CAATACTTAATTCTCATTTTAGCCT-AAAAAC-CTAATTCTCATATGTGCTTTAGCAAAACTGTATTTTTTTAGACAAGT
ATTTATTTTTGTCCAGCCCAAGCTCCCCTCGTGCGTGGCAGGCAACCAAAAGAAGAGACGGGCTGAGCCCATGCTATACA
CTGTTGGGCCGAGCGGAGTTAGAAGCTTCAACGCAATCTCTCCGAAGAGCCCACATGGGCTTCCCCGCATCCCATCCGTC
CATCCACCC-GGCATCCTCGCGACCGCACGATGGAATGGAAACCCTCGAAGCGCACTATATATAC---CTCTCGCCTGTG
TAGGGTTTCCACCCCTCGCGCCCCAGAAGCCCCGACGCTCAAGCCCCCAGACGCCGCAGCGCCGCCACTCCACCCGCAGC
GGCAACCATGGCGGTCGGCAAGAACAAGCGCATCTCCAAGGGGAGGAAGGGTAGCAAGAAGAAGGCGTGAGTGCCTCCCC
CACCCCGCTCATCCTCTGCACCATCGTGATCTGGGATCTGTTTCTTCTTCTCCTCATTCGTCATGTGCTGATGCGGTTTC
TTGCCTGGTTTCTCGTGGTTTTGCAGCGTCGATCCGTTCACCAAGAAGCAGTGGTATGACATCAAGGCGCCGCTGCTGTT
CACCAGCCGCAACGTCGGCAAGACCCTCGTGTCCAGGACACAGGGTACCAAGGTATGCTCTCCCCGGCCTTGCATCTGCG
CTTGCGGTGTTTGTCACTTCCATTGATGTCTTCTGTCCCAGGGATTAGCTGTTTAGTAGTCTGCCTGGTCTCATATATGC
GATTGTGATCTATTTAGTCCTGTTGGCATGAAATGGATTCAACCTTTTTCTCA-AGGTTGCCTTGTTGTGTTAAGAGCTG
AAGGACGTGATAGA------CTAGAATGCAATCGCTATTATTACCCTGCTG----------------------ATAATTG
ATGTTACTTCAGATTTACTATTTTTGTCTTACATATGTTCTCAGTGCTGTAATTTGTA--------------TATGAAAC
GATATCATGCATCTTGTTTCACTCTTGCACAATTTATG------TGTTGTTATGGCCCACTTGTTTTAAAGCTAGCACTG
CGTCTGTTGATTAGAATCAGTAGCTCAGCAT--AAGTACTGTCAGTCGTTTGTGTTTTGTCCAACTGTGTGTCTATGTTG
TAGCTCTTGTTATCCCTAGGCCT-------------------------------TTTGATTTTACATTCATTTAGCAACG
TGTTTAATGCTTGCGTTTGTAGAGATTATA-ACAGTATTAGCTGACTGCACATTTCATTTTTGTTTTAGATTGCCTCAGA
GGGTCTGAAGCACAGGGTGTTTGAAGTATCTCTAGCTGATCTTCAGAACGACGAGGACCAGGCCTACAGGAAGATCAGAC
TCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACCAACTTCTGGGTAATGATTTCTCTGGCATTGCCTTTAACATGA
TGTTATATTGTGTTTTTG-CTTTGCTAACCTGTTCCTCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTC
CCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACAACTGACAACTACATGCTTCGCATGTTCG
CCATTGGCTTCACCAAGAGACGCCCGAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAAT
TAGTCC----TCCTCCTTTTG-TATCTTTGTATGGATAATGTTTTGGTGATCATTGAGGTGATTGTTAACAACTCTATCT
GTGTTTCTTGCTTGTAGATCCGCCGCAAGATGGTTGAGATCATGGTCAACCAAGCTGCAAGCTGTGACTTGAAGGAGCTT
GTGAACAAGTTCATCCCTGAGGTGATCGGAAAGGAGATTGAGAAGGCTACCTCAAGCATCTTCCCCCTCCAGAACGTGTA
CGTCCGCAAGGTGAAGATCCTGAAGGCCCCCAAGTTCGACCTGGGGAAGCTCATGGAGGTAATTGTCTCATGGCACAACC
ATGTCTACTGAATATAGTGTTAGCTGGGCATTAGATAATATT-GTTAATTGTTTGTTCTCCATGTCTACTGAAGTTCTAA
TGTGACACATGTTGCCTGTTCCAGGTTCACGGTGACTACAAGGAGGATGTTGGTGTGAAGCTTGACAGGCCTGCTGATGG
GGACGAGGTCATTCCTGGTGCGGAGGAGGTTGCTGCTGCTGAGTAGAGAATAGAAGTCGCTATTTTGCTGCTTCATATCT
AGAAGATGATATATGTGCCACTT-GGTGTCGTGAACTTTGTAGTCAGTTTTGATGGCTGATTTCTTGAGTACTTGTGTCG
ACATTCCTAGCCAGCGTTCAGCTATCTTATTTTGTTCGTGTTACTTTTCTGGATGGAGGTTATGAGTTG-AAACTAAATA
TTTAGTTTATTCCTGCCGGTGTGT-TTTTATGTTTGAATAGAACTTATGCTGTGTTGTTTTGTTAGTTGTATCTCAGTAC
CAACTTTTTGTTCGCGTGCATACGAGATGTTTGCAGCTTGTATGTAATGGCTACAGCTTCTCCTAGCCAAGGTAGTACTC
CGTCTT-GAATTGCTTGTAGAAGTGACGGGA-------------------------------------------------
----------------------------------AACAGCCAATTTGGCGTTCATTCATCGAGTC-------------TC
ATGCGGCTTTCCATATTAAATGGAT-------------------------------------------------------
------------------------------------AAAATCATGTAGCGACATGTAATTTGGGATGGATCCACCTCCGC
CACAAGTAATTTGGGACGGAGGGAGTATTATATTGTGACAAGGGTTCCAAAACTGCTGTTGCATCAGCAGGTAATTTTGA
AGAGATCAAACTGGTAAGCTGCAATG------AAGAAAATATTGTTGGCATT------ATCAAAGTTTCAATGAAGTGGC
AGTACTGACTTAAAGA----------------------------------------------------------------
-------------------------------------------------GTGGAAATCTCTACTCCTTTGAAGGTGAAGT
ACTTCATGTGGCTAGTTTTGAATATTG-----------------------AGTAAACGTCACTGGGATACTGATTGTAAA
CTCTGGTAAGATGGGAGACATCACAAAACATTCTCTTCACTTGTCCACTGCCCAT-TCAGTGTGGTGCATATCCTTTGCT
TGGATAATTTCACTCACCAGTCTATCATGATCGTCTTCCTTCCATTTCCTGAACTGAACAGATCCAAGCCTAAACCTCCA
CTGCTTCCATCACTTCACAGAGCAGGTTTTGTTTTAAAACTT--CGGGTTAAGTGCAGAAAACCAATGTAATGTTCCTCA
AAGAAAAGCTGGAGATATTCCTATCTGAAATCCCAAGTACTACTACATCAACTACTGCTTTAACAGTAAAAATCAGGGTC
GGCGCCAATAGAGGGCGGTTGCACTGATCTTTATGGATGCAGTCATGTAA----AAAAGTCGGCATTTTCATCTAA
>chr4A_223
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----------------------------------------------------------------------------ATGA
GAATTAATAAATCCAAAAAACAAA--AAAGTATAAAGAAATTAAAATTTAGAAACAAAACAAAAAATCATGATTTTGAAA
ACAAATCGATGGAAAAAGAAACAGTAAAT--A-----AATAAAATAACAAAAGATTGTAAAAA-CCCAAAATAGCAAAGG
AGAAAAAACAAAATACTAGTCGGAAGCTTCTAGCCCAAAACCGGTACATGAGAGGTTGT-GGCACTCCTCCTATAAAAGG
-CTGACTCTTCAGTTCTTTCGCCGTGTCATACTTCATTGCAAAAAAAAAACATACACACAACAACAACAACAACAACACA
CGCAATTCATAAAACCCACAAA-ACATAAAAAAGCCCATGCGAGATGAACACAAAAAGCAAACATGGCCCGCCAGGAGAC
AAACATGCGCCTGATAGCAGAGACGAACCTTTTGCACGTATCAAACAACAACTAATTAGGTGGTGACGAACTTAGATGTG
CAATACTTAATTCTCATTTTAGCCTAAAAAAC-ATAATTCTCATATGTGCTTTAACAAAACTGTATTTATTTCCGTCTCT
TCCCTTTTTTTAGGAGTCTTTCCGTCTCTTCCCCTTTTT----AACCAAAAGAAGAGACGGCCCGAGCCCATGCCATACA
CTATTGGGCC------------AAGCTTCAACACAATCTCCCCGAAGAGCCCACATGGGCTTCCCCGCATCCCATCCGTC
CATCCACCCGGGCATCCTCGCGACCGCACGATGGAATGGAAACCCTCAAAGCGCACTATATATAC---CCCTCGCCTGTG
TAGGGTTTCATCCCCTCGCGCCCCAGAAGCCCCGACGCTCAAGCCCCCAGACGCCGCAGCGCCGCCACTCCACCCGCAGC
GGCAACCATGGCGGTCGGCAAGAACAAGCGCATCTCCAAGGGGAGGAAGGGAAGCAAGAAGAAGGCGTGAGTGCCTCCCC
CACCCCGCTCATCCGTTGCAGCGTCGTGATCTAGGATCTGTTTCATCTCCTCTTCCTCCTTCATGTGCTGATGCGGTTTC
TTGCCTGCTTTCTCGTGGTTTTGCAGCGTCGATCCGTTCACCAAGAAGCAGTGGTATGACATCAAGGCGCCGCTGCTGTT
CACCAGCCGCAACGTCGGCAAGACCCTCGTGTCCAGGACGCAGGGTACCAAGGTATGCTCTCCCCTGCCTTGCATCTGCG
CGTGCAGTGTTTGTCACATCCATTGATGTCTTGTGTCCCATGGATTAGCTGTTTGGTAGTATGCCTGCTCCTATATACGC
GATTGTGATCTATATAGTCCTATTGGCATGAAACGGATTGAACCATTTTCTGA-AGGTTGCGTTGTCGTGTTAAGTGCTG
AAAGGCGTGATACACTAGCACTAAAATGCAATCGCTATTATTTATAAACTATACTTTGTGTACCCTACTGATAATAATTG
ATTTTATTTCGGGATTTACCATTTTGTCTCACCAATG-TCTC--TGGTGCAATTTGTGAATCAGCCCTTAAGTATGAAAC
CAAATCATGCATCTTGTTTCACACTTGCACAGTTTATTTGTAGTTGTAGTTATAGTCCACCTGTTTTTAAACTAGCACCC
AGTCTGTTGATTAGAATCAACAATCAAGCATTCAAGTGTTGTTAGTAGTTTGTGCTTGGTCTAACTGATTCTTCTAACTG
TGTTCCTATGTCGAATGTGTAGCATTTGACACACTGAATCTTTATTTCTAAGCCTTTCCATTTACATTCATCTAGGAATG
TGTTTAATGTTTGTTGTTGTAAGTTGAC-------TATTAGCTGACTGCACATTTCATTTTTATTTTAGATTGCCTCAGA
GGGTCTGAAGCACAGGGTGTTCGAAGTATCTCTAGCTGATCTTCAGAACGATGAGGACCAGGCCTACAGGAAGATCAGAC
TCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACAAACTTCTGGGTAATGATCTCTTTGGCATTGCCTGAAACCTGA
TGTTATGTTGTGTTTTTTCCTTTGCTAACCTGTTCTCCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTC
TCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACCACTGACAACTACATGCTCCGCATGTTCG
CCATTGGCTTCACCAAGAGACGCCCAAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAAT
TTGTTCACCTTGCTCTTTTTTCTATCTGTTTATGTATTAAGTTCTGGTGATCATTGAGCTGATTGTTAACAATTCTATCT
GTGTTTCTTGCTTGTAGATCCGCCGCAAGATGGTTGAGATCATGGTCAACCAAGCTGCAAGCTGTGACTTGAAGGAGCTT
GTGAACAAGTTCATCCCTGAGGTGATTGGAAAGGAGATTGAGAAGGCCACCTCAGGCATCTTCCCCCTCCAGAACGTGTA
CGTCCGCAAGGTGAAGATCCTGAAGGCCCCCAAGTTCGACCTGGGGAAGCTCATGGAGGTAATTGTCTTGTGGCACCACC
ATGTCTACTGAAAATATT-TTAGCTGGGCATTGGATAGACAGCGTTAATTGTTGTTCTCCA--GTCTACTCAAGTTCTAA
TGTGACCCATGTTGCCTGTTCCAGGTTCACGGTGACTACAAGGAGGATGTTGGTGTGAAGCTTGACAGGCCTGCTGATGG
AGATGAGGTGATTCCTGGAGCAGAGGAGGTTGCTGCTGCTGAGTAGAGGATAGAAGTTGCTATTTTGCTGCTTCATATCT
AGAAGATGATATATGTGCCACCTGGGTGTCGTGAACTTTGTAGTCAGTTTTGATGGCTGATTTCTTGAGTACTTCTGTCG
ACATTCCTAGCCAGTGTTCCGCTATCTTATTTTGTTCGTGTTACTTT-CTGGATGGAGGTAATGAGTTGAAAACTAAATA
TTTAGTTTATTCCTGTCC-TGTGT-TTTTATGTTTGAATAGAACTTGTCCTCTGTTTTGTTAGTT----TATCTCAGTA-
CAACTTTTTGTTTGCGTGCATACAAGATGTTTGCAGCTTGC----AATGGCTCCAGCTCCTCCGAGCCAAGATAGCCCTC
CGTCTTATTTGTA--------------------GGAGTATGAAAGTAAAATTAGCAATGTGCTCCCCCAGTTAGTGGCAC
AGAAAGTGAAGATGCGGAAAAGAAAATGGATCGTAACAGCCAATTTGGCGTTCGATTTTTGAGT----------------
----------------------------------AGTATTTATTGACTGCAATATGTACATACGCA--------------
-------------------------AAAATGGATAGAAATTGATGTAGCGACAAGTAATTTGGGACGAAG----------
-----------------------------ATATTGTGACAAGGGTTCCAAAACTGTTGTTGCATCAGCAGGTAATTTTGA
AGAGATCAAACTGGTTGGCATTAGATAAATCAAAGAAAATGTTGTTGGCTTTAGATAAATCATAGTTTCAATGAAGTGGC
ACTACTGACTTAAGGGC---------------------------------------------------------------
----------------------------------------TAGATATCTGTGGAAATCTCTACTCCTTTGAAGGTGAAGC
ACTTTATGTGGCTAGTTATGAATGTTCGCATTCAGTCTGCTGCAGAATTAAGTAAACGTCACTGGGATACTGATTGTAAA
CTCTGGTAAGAT-GGAGACATCACAAAACATTCTCTTCACTTGTCCACTGCCTATCCAGC--------------------
-------CTTCATTCATCAATCTATCATGATCGTCTTCCTTCCCTTTCCTCAACTGAACAGATCCAAGCCTAAACCTCCA
CTGCTTCCATCACTTGGCAGAGCAGGTCTTGTTTTAAAACTTTTCAGGTTAAGTGCAGAAAACCAATGAAATGTTCCTCA
AAGAAAAGCTGGAGATATTCCTATCTGAAATCCAAAGCACTACTGGATCAACTACTGCTTTAACAGTAAAAATCAGGGTT
GGCACTAACAGAGGGCGGTTGCACTGGTCTTTATGGATGCAGTGATGTAAAA------------------------
>SNPs
---S------------------S--S---S-------------------------S-------------------S----
---SSS-----SS---S-----S-----------------SSSSS--------------------S------S-S-----
-------------SS-------------S--S-S------S-----------SSS------S------------------
------------------------SS------------------------------------------------------
---------------------------S-SS------S-----SS---------------------S------------S
------------S----------------------------------------------SSSS---------------S-
-----------------------------------------------S---------------------S---S------
-----------S----------S---------------------------------------------------------
-----------------------------------------S------------------------S-------------
-------------------------------SS----------------S----------------------S-------
-------S-S-SS-------------------------------------------------------------------
-------------------S-------------------S---------------S------------------------
----------------------------S---------------------S--------------SSS------S-----
----------S-S-SSSS--------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------S----------------S-----------------------S--------S--------S------
-----------------S--S-----------------------------------------------------------
-------------------------------------------------------------S----S-----------S-
-------------------S-S------S-----------SS--------------------------S-----------
-----S-----------------------------------------------S---------------------S----
S------------------S-------------------SS---------------------------------------
------S----S-------S--------------------------S------------SSS------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-----S---S----
-------------S----------S-S-S------------SS----S-------------------------------S
----S-----------S-SSSS---S-S-SS--S---------S--------S-----S---------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S----------------S-
----S---------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------S------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
------------------------------S-------------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------S-----------
------------------------S--------------S--------------------------S-------------
---------------------------------------------------------------------S--SS------
------S------------------------SS----S-------------------------------S-----S----
-----------SS-SSS-SSSS-----------S--------------------S----------SSSSSSSSSSSSS--
---------S-SSSS---SSS-SSSSSSSSSSSS----------S-------S--SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S-S-----------------
------------------------------------------------S-----------S-----------S-------
----------------------------------------------------S---------------------------
----------S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S--------------------
---------------S--------------------------------------------------------------S-
------------------------------S-----------------S----SSS------------------------
------S---------------------------------S---------------------------------------
-----------------------------S--------------------------------------------------
-------S------------------------------------------------------------------------
----------------------------------------------------SS----S-----------------
>forward_462
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------------------------------------------GGTACATGAGAGGTCGCGAC------------------
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>reverse_1460
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-------------------TCCTTGATGCCTTCTGTCCC-----------------------------------------
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>forward_1178
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGGGGAGGAAGGGTAGCAAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2907
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCACGGTGACTACAAGGAGG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGTGCGGTGTTTGTCACTTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3452
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GGGAAAAGGGCATGGATCGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
