>input_sequence_35609
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-----------------------------------CTGGCTGCGTTGTTGCCACCACCGGCATCTCAGCAATGGCGGCAG
CAAGAGTGCAGCCTCCGCTCGACCCACGAGCGCCGCCGCCTTCCATGGCGGTTCCCACCTCCAACACTCGAAGCCTACAG
GCCACGCCCATCCACACTTCCAGCCCTTCCGTCCGCGCGCTGTTCCTCCGCGCCGTGGACCCCTCCCGTCCTGCCTCCTG
GTCCGCCGCCGTCGCCGACCTCCTTGCTTCCGGAGACGCCGTCGCCGCTCTGGCCACCTTTGCCGCCGCTCTCCGCGCTA
ACCCCGCCGCGCTCCTCCCGGCCCTCCCCCCCGCCTTCCGCGCAGCTGCCGCCGCCACCTCGCTCGCCGCCGGCCGCCAG
CTACACCTCATTGCCCTCCGTTCCGGTCTCTTTCCCTCTGATCCCTTCTCCGCCTCCGCTCTTCTCCACATGTACCACCA
CTGCTGCCGCCCCCTCGACGCCCGCAAGGCGTTCGATGAAATTCCCAGCCCCAACCCCGTCATTATCACAGCCATGTGCT
CTGGCTACCTGCGAAACAATCTAGTCTACCCCTCGCTTGCTCTCTTCCGCGACTTGCTCGCATCTGGTTCTGCCATGGCA
GTGGACGAGGCGGCTGCACTCGTGGCGTTCTCCTCGTCAGCCCGTGTCCCTGCCCGCGGAATTACCGCTAGCCTTCATGC
GCTTATTGTGAAGATTGGCTTGGACGTGGATGCTGGGGTGGTCAACACGATGTTACACGCTTATGCCAAAGGCGGTGGTC
GTGACCTGCCGGCTGCGAGGAAGGTGTTTGATACCATGGAGAAGGATGTCGTGTCCTGGAATACGATGATTGCGCTGTAT
GCTCAGAATGGGTTGTCGGCGGAGGCCCTCGAGCTGTATGGCAAGATGCTGAATGTTGGTGGAGGCATTAGGTACAATGC
TGTGACGTTCTCTGCTGTGTTACTGGCTTGCGCGCATGCTGGGACGATACAGACTGGAAAGCGCATTCATAATCAGGTGG
TAAGAATGGGTTTGGAGGAAAATACCTATGTTGGAACTTCTGTAGTTGATATGTACAGCAAGTGCGGAAGAGTGGAAATG
GCAAGAAAGGCTTTCGGCAAAATTAAGGAGAAGAATGTCCTTTCATGGTCTGCCATGATTACTGGTTATGGTATGCATGG
TCATGGACAAAACGCCCTTGAAGTTTTCAATGAGATGTGCAGATCGGGGCAAAACCCTAACTACATAACTTTTATCTCGG
TTTTAGCTGCTTGCAGTCATGCTGGTCTTTTAGATATGGGCCGTTATTGGTACAAAACCATGAAGAATAAGTTTGGGATT
GAACCTGGAGTGGAACACTACGGATGCATGGTGGATCTTCTTGGCCGCGCCGGTTGTCTTGATGAGGCTTATGGCCTCAT
TAAAGAAATGAAGGTTAAACCTGATGCTGCTATCTGGGGAGCTCTTCTTAGTGCATGTCGAGTCCATAAAAATGTTGAGC
TGGGAGAAATTTCTGCGAAAAGATTGTTTGAGTTGGATGTAACCAACAGTGGGTACTATGTTCTATTGTCCAATATATAT
GCAGAAGCTGGAATGTGGAAAGATGTGGAGAGAATGAGAGTTCTGGTTAAAACAAGAGGAATAGAAAAGCCTCCAGGGTA
TAGCTCAGTTGAATTGAAAGGTAAAACCCATGTGTTTTATGTTGGCGACACGAGTCATCCTCAGCATAAGGAGATCTATT
CTTATTTGGGGAAACTGCTTGACATAGCGCAAAAGGCAGGCTATGTACCAAACACGGGTTCTGTTCATCATGATTTGGAT
GAAGAGGAGAAAGAATCTGCGTTGCGCATCCATAGTGAAAAGCTTGCCGTTGCTTTTGCTCTGATGAACTCTGTCCCGGG
TTCAGTAATCCATGTGATAAAGAATCTCCGGGTCTGTACTGATTGCCATGCAGTAATCAAGTTTATTTCAGAGTCCGCTG
AACGAGAAATTATCGTTAGAGATTTACAGCGCTTTCATCATTTCAAGGATGGATCATGCTCTTGTGGAGATTATTGGTGA
TAGGGTCGTACAAGAGGGCTGAGGTCGTGATACCACCTTCGTTGTCCGTCATACCACCGTTGTATTATGTACAGGTCGAT
TTATTTCCAGGACATAT--TGTTACACCTCATCTTGATTAGGCTAATGACATTGCCTTGCTGCCCTGAACACTGGGAACT
TAGAAGATTTTATAGCTTGGCATAAATCAAAAAGTTACGCCTTT------------------------------------
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>chr4B_1_TraesCS4B01G115900
GTTGTCTGATAGCTTGACACCGCACTGATTAATGACTGGGGTGGAGATAAGGTGGAGCGGTGGCATTTTGGTGAAAGCCT
GGCGACATGGAGCCTGGCGGGTTCTGGTCTTGGCGCCCCCGGAAACCTTGCCGGGGCGAACTGGTCTCGCTCCTCTGGTA
CTGCCTTGACCCGGCCAGGCTCTCCTGCCCAGCAAGGGAGGCTTCCCTGAGGTGGTCTCTTGCTGACTTGCTTCTCTTAA
GTCTAGTCATGCCCAGCAAATGGCAGTTTGCCCGGGAGCCCCCGCAAGCCTGTGCACTAGTCAGGGGGAAACAAATACCC
ATGTTTGTGTATCTGAGGTGGTCTCTTGCTGACTTGCTTCTCTTAAGTCTAGTCATGCCCGGGAGGCCCCGCAAACCTGT
GCACTAGTCAGGGGAAACAAATACCTCTATTTATGTACACCGACATCCAAAGTATGAAATAAATC--AAAAAATAACACG
AGCACTGCGTCCACACACACCTTTGAAGGAGAGATTTGTTCATTGCCGATGTACATGCCCTTTTATTGCGTCAAACATCT
TTGAGGGGAAAGGTTTGTTCATTGTGGCTTACACATGCCCTTTTATTACGGATGTGTTTGGATTGTGACCAAAGTGCATC
TTACCAAAATTGTGGTCATGAGT-AAAGATTGGTCTTTATTTGAATGGTTGTCAATTTTTTGGCATGCCAATAAACTCAA
GCTAAGTCTAGTTCATTTTTCTTACCCATGCTGGTCAAATCATGGATAATCAAAACCTCAATCAAAATTTTTGGCTAGCC
AATGCTTCTTTTTTATCATATAAAACACCTTGCATTTC------------------------------------------
----ATTAACCTGTGGA-----------CGCCGGC----------CACACCACGGATTACATCAACGAAAAAATTCGTAA
TCCACAGAGTATTCTTTGGTGAGGCAACCTTGGGCATAAAC---------------------------------------
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----------------------------------------------CAAACACACCCTGCGTTCTTCCTTCTCCCCCGGA
ACCTCTCTCACGAAAGCGCTCATCAACCTCCGTTCCTGGCTGCGTTGTTGCCACCACCGGCATCTCAGCAATGGCGGCAG
CAAGAGTGCAGCCTCCGCTCGACCCACGAGCGCCGCCGCCTTCCATGGCGGTTCCCACCTCCAACACTCGAAGCCTACAG
GCCACGCCCATCCACACTTCCAGCCCTTCCGTCCGCGCGCTGTTCCTCCGCGCCGTGGACCCCTCCCGTCCTGCCTCCTG
GTCCGCCGCCGTCGCCGACCTCCTTGCTTCCGGAGACGCCGTCGCCGCTCTGGCCACCTTTGCCGCCGCTCTCCGCGCTA
ACCCCGCCGCGCTCCTCCCGGCCCTCCCCCCCGCCTTCCGCGCAGCTGCCGCCGCCACCTCGCTCGCCGCCGGCCGCCAG
CTACACCTCATTGCCCTCCGTTCCGGTCTCTTTCCCTCTGATCCCTTCTCCGCCTCCGCTCTTCTCCACATGTACCACCA
CTGCTGCCGCCCCCTCGACGCCCGCAAGGCGTTCGATGAAATTCCCAGCCCCAACCCCGTCATTATCACAGCCATGTGCT
CTGGCTACCTGCGAAACAATCTAGTCTACCCCTCGCTTGCTCTCTTCCGCGACTTGCTCGCATCTGGTTCTGCCATGGCA
GTGGACGAGGCGGCTGCACTCGTGGCGTTCTCCTCGTCAGCCCGTGTCCCTGCCCGCGGAATTACCGCTAGCCTTCATGC
GCTTATTGTGAAGATTGGCTTGGACGTGGATGCTGGGGTGGTCAACACGATGTTACACGCTTATGCCAAAGGCGGTGGTC
GTGACCTGCCGGCTGCGAGGAAGGTGTTTGATACCATGGAGAAGGATGTCGTGTCCTGGAATACGATGATTGCGCTGTAT
GCTCAGAATGGGTTGTCGGCGGAGGCCCTCGAGCTGTATGGCAAGATGCTGAATGTTGGTGGAGGCATTAGGTACAATGC
TGTGACGTTCTCTGCTGTGTTACTGGCTTGCGCGCATGCTGGGACGATACAGACTGGAAAGCGCATTCATAATCAGGTGG
TAAGAATGGGTTTGGAGGAAAATACCTATGTTGGAACTTCTGTAGTTGATATGTACAGCAAGTGCGGAAGAGTGGAAATG
GCAAGAAAGGCTTTCGGCAAAATTAAGGAGAAGAATGTCCTTTCATGGTCTGCCATGATTACTGGTTATGGTATGCATGG
TCATGGACAAAACGCCCTTGAAGTTTTCAATGAGATGTGCAGATCGGGGCAAAACCCTAACTACATAACTTTTATCTCGG
TTTTAGCTGCTTGCAGTCATGCTGGTCTTTTAGATATGGGCCGTTATTGGTACAAAACCATGAAGAATAAGTTTGGGATT
GAACCTGGAGTGGAACACTACGGATGCATGGTGGATCTTCTTGGCCGCGCCGGTTGTCTTGATGAGGCTTATGGCCTCAT
TAAAGAAATGAAGGTTAAACCTGATGCTGCTATCTGGGGAGCTCTTCTTAGTGCATGTCGAGTCCATAAAAATGTTGAGC
TGGGAGAAATTTCTGCGAAAAGATTGTTTGAGTTGGATGTAACCAACAGTGGGTACTATGTTCTATTGTCCAATATATAT
GCAGAAGCTGGAATGTGGAAAGATGTGGAGAGAATGAGAGTTCTGGTTAAAACAAGAGGAATAGAAAAGCCTCCAGGGTA
TAGCTCAGTTGAATTGAAAGGTAAAACCCATGTGTTTTATGTTGGCGACACGAGTCATCCTCAGCATAAGGAGATCTATT
CTTATTTGGGGAAACTGCTTGACATAGCGCAAAAGGCAGGCTATGTACCAAACACGGGTTCTGTTCATCATGATTTGGAT
GAAGAGGAGAAAGAATCTGCGTTGCGCATCCATAGTGAAAAGCTTGCCGTTGCTTTTGCTCTGATGAACTCTGTCCCGGG
TTCAGTAATCCATGTGATAAAGAATCTCCGGGTCTGTACTGATTGCCATGCAGTAATCAAGTTTATTTCAGAGTCCGCTG
AACGAGAAATTATCGTTAGAGATTTACAGCGCTTTCATCATTTCAAGGATGGATCATGCTCTTGTGGAGATTATTGGTGA
TAGGGTCGTACAAGAGGGCTGAGGTCGTGATACCACCTTCGTTGTCCGTCATACCACCGTTGTATTATGTACAGGTCGAT
TTATTTCCAGGACATAT--TGTTACACCTCATCTTGATTAGGCTAATGACATTGCCTTGCTGCCCTGAACACTGGGAACT
TAGAAGATTTTATAGCTTGGCATAAATCAAAAAGTTACGCCTTTTCTGTAAGATCTGCATACTACAATGAATGGCACAAC
AAGTTGGTTCAAGGAGACGCTGATCAGATGGACAAGGCAGCTCGAGGCTGAACCCAGTATGGGAGATCTCCTGTGGAACT
TACATGTCCCCAGCAAGGTATTTTTTTCCCATGGAGGGCTCTTCACAGTGTGATACCGGGGATGATTGTTCTTGCAGGTA
GGCATATCAGGACCTCACCCCAATGTCCCATCTGCTGCTGGGGAGCCAAGGACATAAAGCACCTGATGTTCACGTGCGAC
AAGCACT-----------------------GGGACTTGAGGTGTTCATCAAACAAGCAACGCAGATTGATCAACCACGGG
TCAGTGATGCTTGAGGAAATTTTGAGGAGTACTGTCAAACATTCAGCGGTTAACGCAGATTGATCAACCACGGGTCAGTG
ATGCTTGAGGAAATTTTGAGGAGTACTGTCAAACATTCAGCGGTTAACGCAGATTGATCAACCACGGGTCAGTGATGCTT
GAGGAAATTTTGAGGAGTACTGTCAAACATTCAGCGGTTATGGGTCGGTACGGTGTACAGGAGACGACCGCTGTAGGGGC
ATGGTATATCTTGTGGCAGCGAC-----------------GGAAAGGTGGAACCTGCTCAGTCAACTGTGTTTGCAATTC
AGGCTATTAGCGCGACCTATGCAAAAGCTCTGAGCAGTTCACAACCAGTCCTGATACGATGAGGGAAGCCT-CCTTGGAA
TTCTTATAAACTGAATG-GGATGCATCATCATAC-----TTTGAAAATGGAACAGGGGCAGTGGCTGCGGTCCTCCGCAA
TGATCATGGTGAACCGGTTGCTGGGTTCTTGATCACATGTTGGACTCGGCCACGGTGGAGGCGACCACTATCCAGAAGGG
--------CCCAGAACTGGTTGAAAACTTGGGATGTAAACACCATCATCGTCGAGTCTGACTGCCTGGAAGTGATTCAAG
CGTGCAATGGTTTGTATGGTCAAGGTATTTAAGTGATCATGTTTACCATCATCGTTGAG
>chr4A_1
GTTGTCTGATAGCTTGACACCACATTGATTAATGACTGGGGTGTGATGGCG--------------TTTTGCTGAAAGCCT
GCCGGCAAGGAGCCTGGCGGGTTCTCGTCTTGGCGACCCCGGAAACCTTGCCGGGGCAAACTGGTCTCGCTCTTCTGGTG
CTACCTTGACCTGGCCAGGCTCTCCTTCCCTACAAGGGAGGCTTCCCTGAGGTGGTCTCTTGTTGACTCGCTTCTCTTAA
GTCTAGTCATGCCCGGCAAG-GGCAGTTTGCCCGGGAGGCCCCGCAAGCCTGTGCACTAGTCAGGGGGAAACAAATACCC
CTGTTTGTGTA---------------------------------------------------------------------
-------------------------------------CACCGACGCCAGAAGTCTGAAATAAATC--AAAAAATAACACG
AGCACTACGTCCGCACACACCTTTGAGGGG--------------------------------------------------
---------AATATTTGTTTATTGTGGCTTACACATGCTCTTTTATTACGAGTGTGTTTGGATTGTCGCCAAAGTGCATC
CTACCAAAATTTTAGTCATGAGCGAAAGATTGGTCTTTGTTTAAATGGTTGTCAATTTTTTGGCATGCCAATAAACTTGA
GCCAATTCTAGTTCATTTTTCTTGCCAATGCTAGCCAAATCATGGGCAACC-------------AAAATTTTGGCTAGCC
AATGCTTTTTT------ATGTGAAACAGGTTGCATTCTACTCCCTCCGTCTCATAATATTCTTATATTTTGGGACAGAGG
GAGTATTAACTTGTGGACGTGGCAAGATCGCCGGC----------CACTCCACGAATTACATCAGCGGGAAAATTGGTGA
TCCATAGAG-----TTTGGTGGGGCAACATT-GGCATAAACTAACGGAAATGTTAACGCCCACACGTGTGGGCGTTAGCC
AACTCACCCACACGCCTCCATCACCGTCTAGTAACTTCTGCACGAATCTTGACACGAATTAGCAGATTTTGTATGCCACG
TAGGACAACTCGCGTGTGTGGTGTGTGAGAGAGGTCACCCACACATCTGTTTTACCACACGGAGGGGCCGGTGTGTGGGC
GTTTAGCAGTTCGTCCACACACCAGTTTTCAGTCACGCACAAGGGCTGGTGTGTGGGCGTTTGCCATCTCGCCCACACGC
CCGTCTCCTCTCCCACACCCAAGCTGCCAGTTGCCATGCGTTTTGCAGTGTACATGGCAACTGCCCTAGTGTGATTGCAA
GCAGATGGCAACTGCCCTAGTGTGATTGCAAGCAGATGGCAACTCTCTCTTTTTTTTACCCGAACATATCAGTTGCCATA
TGTTTTGCATGGTACATGGCAAACTGCCCTAGCGTGCACGTAAGCAGATGGCAACTCTTTTTTTTACATGGCAACTGTCC
TAGCGTGCTTGTGATCACATGGCAACTCTCTCTTTTACCTGAACATGTTTTTTTGCCATGCCTTTTTTTGTAGTGCTGCA
TGGCAACTGCCTAGTGTTAGTAGGTGGCAACTCCTAAAGTTTTGAAATCATGCCAACTGCAGTAGACCAGATCACACATG
GCAACAACTGTAGTTGTCCAAAAAATGGCAATGTGGAACTTTGACCTGAGATGGCAACTGTAGTTGAGCAAACATGGCAA
CTGTAGTTGTCCGACATGGCAACCGCAATTCAGCGACATGGTAACTGCACTTAAACGAACATGGACGAGGGTCCGGCCCA
TGGCAACTGCGGGCGCGCGGTAAAGTGTCACGTGGGGCGTGCGGGACCACGAGGTGCAAGGCCTGATGTACCGGGCATGT
GGGCGTTATCTATTTCGCCCACACGCACGCGTGTAAGAGGGACCAGGAGAAAAAAAAGAAACATATGGATGCTAGTTGTT
TTACCCACACACAGACGTGTGGGCTGGTCCTCTCTGCGTTCTAAACCAAACACACCCTACG-TCTTCCTTCTCCCTCGGA
ACCTCTCTCACGAAAGCGCTCATCAACCTCCGCTCCTGGCTGCGTTGTGGCCACCACCGGCATCTCAGGAATGGCGGCAG
CAAGAGTGCAGCCTCCGCTCAACCCACGAGCGGCGTCGCCTTCCACGGCAGTCCCCGCCTCCAACACTCAAAGCCTACAG
AGCACGCCCATCCACAGTTCCACCCCTTCCGTCCGCGCACTGTTCCTCCGCGCCGTGGACCCCTCCCGTCCTGCCTCCTG
GTCCGCCGCCGTCGCCGACCTCCTTGCTTCCGGAGACGCCGTCGCCGCTCTGGCCACCTTTGCCGCCGCTCTCCGCGCTA
ACCCGGCCGCGCTCCTCCCGGCCCTTCCCCCCGCCTTCCGCGCAGCTGCCGCCGCCACCTCCCTCGCCGCCGGCCGCCAG
CTACACCTCCTTGCCCTCCGTTCCGGCCTCTTTCCCTCTGACCCCTTCTCCGCCTCCGCTCTTCTCCACATGTACAACCA
CTGCTGCCGCCCGCTCGACGCCCGTAAGGCGTTCGATGAAATTCCCAGCCCCAACCCCGTCATTATCACGGCCATGTGCT
CTGGCTACCTGCGAAACAATCTAGTCTACCCCTCGCTTTCTCTCTTCCGCGACTTGCTCGCGTCTGGTTCTGCCATGGCG
GTGGACGAGGCGGCTGTGCTTGTGGCGTTCTCCTCGTCGGCCCGTGTCCCTGTCCGCGGAATTACTGCTAGCCTTCATGC
GCTTATTGTGAAGATTGGCTTGGACGTGGATGCTGGGGTGGTCAACACGATGTTAGACGCTTATGCCAAAGGCGGTGGTC
GTGACCTGCCGGTTGCGAGGAAGGTGTTTGATACCATGGAGAAGGATGTGGTGTCCTGGAATACGATGATTGCGCTGTAT
GCTCAGAATGGGTTGTCGGCGGAGGCCCTGGAGCTGTATGGCAAGATGCTGAATGTTGGTGGAGGCATTAGGTACAATGC
TGTGACGTTCTCTGCTGTGTTACTGGCTTGCGCACATGCTGGGACGATACAGACTGGAAAACGCATTCATAATCAGGTGG
TAAGAATGGGTTTGGAGGAAAATACCTATGTTGGAACTTCTGTAGTTGATATGTACAGCAAGTGCGGAAGAGTGGAAATG
GCAAGAAAGGCTTTCGGCAAAATTAAGCAGAAGAATGTCCTGTCATGGTCTGCCATGATTACTGGTTATGGTATGCATGG
TCATGGACAAGACGCCCTTGAAGTTTTCAATGAGATGTGCAGATCGGGGCAAAACCCTAACTACATAACTTTTATCTCCG
TTTTAGCTGCTTGCAGTCATGCTGGTCTTTTAGATATGGGCCGTTATTGGTACAAAACCATGAGGAATAAGTTTGGGATT
GAACCTGGAGTGGAACACTACGGATGCATGGTGGATCTTCTTGGCCGTGCCGGTTGTCTTGATGAGGCTTATGGCCTCAT
TAAAGAAATGAAGGTTAAACCTGATGCTGCTATCTGGGGAGCTCTTCTTAGTGCATGCCGAGTCCAGAAAAATGTTGAGC
TGGCAGAAATTTCTGCGAAAAGATTGTTTGAGTTAGATGCGACCAACAGTGGGTACTATGTTTTATTGTCCAATATATAT
GCAGAAGCTGGAATGTGGACAGATGTGGAGAGAATGAGAGTTCTGGTTAAAACAAGAGGAATAGAAAAACCTCCAGGGTA
TAGCTCAGTTGAATTGAAAGGTAAAACCCATGTGTTTTATGTTGGCGACACGAGTCATCCTCAGCACAAGGAGATCTATT
CTTATCTGGGGAAACTGCTTGAGATAGCGCAAAAAGCAGGCTATGTACCAAACACGGGTTCTGTTCATCATGATTTGGAT
GAAGAGGAGAAAGAATCTGCGTTGCGCATCCACAGTGAAAAGCTTGCTGTTGCTTTTGCTCTGATGAACTCTGTCCCGGG
TTCAGTAATCCATGTGATAAAGAATCTCCGGGTCTGTACTGATTGCCATGCAGTAATCAAGTTTATTTCCAAGTCCGCTG
AACGAGAAATTATTGTTAGAGATTTACAGCGCTTTCATCATTTTAAGGATGGATCATGCTCTTGTGGAGATTATTGGTGA
TAGGGTCGTGCAAGAGGGCTGAGGTCGTGATACCATCTTCGTTGTCCGTCATACCACCATTGTATTATGTACATGCCAAT
TTATTTCCAAGACATAT--TGTTACACCTCATCTCGATTAGGCTAATGACATCGCCTTGCTGCCCTGAATACTGGGAACT
TAGAAGATTTTATAGCTTGGCATAAATAAAAAAATTACGCCTTTTCTGTAAGATCTGCATACTATAATGAATGGCACAAC
AAGTTGGTTCAAGGAGACGTCGATCGGATGGACAAGGCAGCTCGAGGCTGAACCCAGTATGGGAGATCTCCTATGGAACT
TACATGTCCCCAGCAAGGTATTGTTTCCT-ATGGAGGGCTCTTCACAGTGTGATACCGGGGATGATTGTTCTTGCAGGTA
GGCATATCAAGACCTCACCCCAATGTCCCATCTGCTGCTGGGGAGCCAAGGATATAAAGCACATGATGTTCACGGGAGGC
GTGGCATGCGAGGAAGGTTTGGCAAGCGCAGGGACTTGAGGTGTTCATCAAACAAGCAATGCAGATTGATCGATCACGGG
TCAGTGATGCTTGAGGAAACTTTGAGGAGTACTG----------------------------------------------
--------------------------------------------------------------------------------
----------------------TCAAACATTCAGCGTTTATGGGTCGGTATGGTGTACAGGAGACGATCGCCGTAGGGGC
ATGGTATATCCTGTGGCAGCGACGGGAGGTTGTTAATCGAGGAGAGGTGGAACCTGCTCAGTCAACTGTGTTTGCAATTC
AGGCTATTGGCGCGAACTATGCAAAAGCTCTGAACAGTTCACAACCAGTCCTGATATGATGAGGGAAGCCT-CA-TGGAA
TTATTATAAACTGAATGTGGATGCATCATCATCATACTTTTTGAAAATGGAACAGGGGCAGTGGCTGCGGTCCTCCGCAA
TGATCATGGTGAACCGGTCGCTGGGTTCTTGATCACATGTTGGACTCGGCCACGGTGGAGGCGACCGCTACCCAGAAGGG
CCCGGAGCCCCGGAACTGGTTGAAAACTTGGGATGTAA-CACCATCATCGTCGAGTCTGACCGCCTGGAAGTGATTCAAG
CATGCAACGGTTTGTTTGGTCAAGGTATGGAAGTGATTATGTTTA--------------
>chr4D_2
-TTGTCTGATAGCTTGACAACGCACTGATTAATGACTAGGGTGCTATGGTG--------------TTTTGGTAAAAGCCT
GCCGGCAAGGAGCCTAGCGAGTTGTCGTCTTGGCGGCCCCGGAAAGCTTGCCGGGGCAAACTGGTCTCGCTCCTCTGGTG
CTGCCTTGACCCGGCCAGGCTCTCCTGGCCGGCAAGGGAGGCTTCCCTGAGGTGGTCTCTTGTTGACTTGCTTCTCTTAA
GTCTAGTCATGCCCGGCAAG-GGCAGTTTGCCCGGGAGGCCCCGCAAGCCTGTGCACTAGTCAAGGGGAAACAAATACCC
CTGTTTGTGTA---------------------------------------------------------------------
-------------------------------------CACCGACACCAGAAGTCTGAAATAAATAAAAAAAAATAACACG
CGCACTACGTCCGCACACACCTTTGAGGGG--------------------------------------------------
---------AAGATTTGTTTATTGTGGCTTACACATGCCCTTTTATTACGAGTGTGTTTAGATTGTCGCCAAAGTGCATC
CTACCAAAATTTTGGTCATGAGCGAAAAATTAGTCTTTATTTGGATAGTTGCCAATTTTTTGGCATGCCAATGAACTCGA
GCCAATTCTAGTTCATTTTT-TTGACAATGCTGGCCAAATCATGAACAATC-------------AAAATTTTGGCTAGCT
AATGCTTTTTTT-----ATCTGAAACACCTTGCATTTC------------------------------------------
----ATTAACCTGTGGA-----------CGTGGCAAGATCGCCAGCACTCCACGGATTACATCAGCGGGAAAATTCGTGA
TCCATCGAG-----TTTGGTGGGGCAACCTT-GGCATAAAC---------------------------------------
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----------------------------------------------CAAACACACCCTACG-TCTTCCTTCTCCCTCGGA
ACCTCTCTCACGAAAGCGCTCATCAACCTCCGCTCCTGGCTGCGTTGTTGCCACCACCGGCATCTCAGCAATGGCGGCAG
CAAGAGTGCAGCCTCCGCTCAACCCACGAGCGGCGTCGCCTTCCACGGCAGTCCCCACCTCCAACACTCAAAGCCTACAG
AGCACGCCCCTCCATACTTCCACCCCTTCCGTCCGCGCGCTGTTCCTCCGCGCCGTGGACCCCTCCCGTCCTGCCTCCTG
GTCCGCCGCCGTCGCCGACCTTCTTGCTTCCGGAGACGCCGTCGCCGCTCTGGCCACCTTTGCCGCCGCTCTCCGCGCTA
ACCCGGCCGCGCTCCTCCCGGCCCTTCCCCCCGCCTTCCGCGCAGCTGCCGCCGCCACCTCGCTCGTCGCCGGCCGCCAG
CTACACCTCCTTGCCCTCCGTTCCGGTCTCTTTCCCTCCGATCCCTTCTCCGCCTCCGCTCTTCTCCACATGTACCACCA
CTGCTGCCGCCCCCTCGACGCCCGCAAGGCGTTCGATGAAATTCCCAGCCCCAACCCTGTCATTATCACAGCCATGTGCT
CTGGCTACCTGCGAAACAATCTAGTCTACCCCTCGCTCGCTCTCTTCCGCGACTTGCTCACATCTGGTTCTGCCATGGCG
GTGGACGAGGCGGCTGCACTCGTGGCGTTCTCCTCGTCGGCCCGTGTCCCTGTCCGCGGAATTACTGCTAGCCTTCATGC
GCTTATTGTGAAGATTGGCCTGGACGTGGATGCTGGGGTGGTCAACACGATGTTAGACGCTTATGCCAAAGGCGGTGGTC
GTGACCTGCCGGCTGCGAGGAAGGTGTTTGATACCATGGAGAAGGATGTCGTGTCCTGGAATACGATGATTGCGCTGTAT
GCTCAGAATGGGTTGTCGGCGGAGGCCCTCGAGCTGTATTGCAAGATGCTGAATGTTGGTGGAGGCATTAGGTACAATGC
TGTGACGTTCTCTGCTGTGTTACTGGCTTGCGCGCATGCTGGGACGATACAGACTGGAAAGCGTGTTCATAATCAGGTGG
TAAGAATGGGTTTGGAGGAAAATACCTATGTTGGAACTTCTGTAGTTGATATGTACAGCAAGTGCGGAAGAGTGGAAATG
GCAAGAAAAGCTTTCGGCAAAATTAAGGAGAAGAATGTCCTTTCATGGTCTGCCATGATTACTGGTTATGGTATGCACGG
TCATGGACAAGACGCCCTTGAAGTTTTCAATGAGATGTGCAGATCGGGGCAAAACCCTAACTACATAACTTTTATCTCGG
TTTTAGCTGCTTGCAGTCATGCTGGTCTTTTAGATATGGGCCGTTATTGGTACAAAACCATGAAGAATAAGTTTGGGGTT
GAACCTGGAGTGGAACACTACGGATGCATGGTGGATCTTCTTGGCCGCGCCGGTTGTCTTGATGAGGCTTATGGCCTCAT
TAAAGAAATGAAGGTTAAACCTGATGCTGCTATCTGGGGAGCTCTTCTTAGTGCATGTCGAGTCCATAAAAATGTTGAGC
TGGCAGAAATTTCTGCGAAAAGATTGTTTGAGTTGGATGCAACCAACAGTGGGTACTATGTTTTATTGTCCAATATATAT
GCAGAAGCTGGAATGTGGAAAGATGTGGAGAGAATGAGAGTTCTGGTTAAAACAAGAGGAATAGAAAAGCCTCCAGGGTA
TAGCTCAGTTGAATTGAAAGGTAAAACCCATGTGTTTTATGTTGGCGACACGAGTCATCCTCAGCACAAGGAGATCTATT
CTTATTTGGGGAAACTGCTTGACATAGCGCAAAAGGCAGGCTATGTACCAAACACGGGCTCTGTTCATCATGATTTGGAT
GAAGAGGAGAAAGAATCTGCGTTGCGCATCCATAGTGAAAAGCTTGCCGTTGCTTTTGCTCTGATGAACTCTATCCCGGG
TTCAGTAATCCATGTGATAAAGAATCTCCGGGTCTGTACTGATTGCCATGCAGTAATCAAGTTTATTTCCAAGTCCGCTG
AACGAGAAATTATTGTTAGAGATTTACAGCGCTTTCATCATTTCAAGGATGGATCATGCTCTTGTGGAGATTATTGGTGA
TAGGGTCGTGCAAGAGGGCTGAGGTCGTGATACCATCTTCGTTGTCCGTCATACCACCGTGGTATTATGTACAGGTCGAT
TTATTTCCAAGACATATTTTGTTACACCTCATCTCGATTAGGCTAATGACATTGCCTTGCTGCCCTGAACACTGGGAACT
TAGAAGATTTTATAGCTTGGCATAAATCAAAAACTTACGCCTTTTCTGTAAGATCTGCATACTATAATGAATGGCACAAC
AAGTTGGTTCAAGGAGACGTCGATCGGATGGACAAGGCAGCTTGAGGCTGAACCCAGTATGGGAGATCCCCTATGGAACT
TACATGTCCCCAGCAAGGTATTTTTTCCT-ATGGAGGGCTCTTCACAGTGTGATACCGGGGATGATTGTTCTTGCAGGTA
GGCTTATCAAGACCTCACCCCAATGTCCCATCTGCTGCTGGGGAGCCAAGGATATAAAGCACCTGATGTTCACGGGCGGC
GTGGCATGCGAGGAAGGTTTGGCAAGCGCAGGGACTTGAGGTGTTCATCAAACAAGCAACGCAGATTGATCGATCACGGG
TCAGTGATGCTTGAGGAAATTTT---GAGTACTG----------------------------------------------
--------------------------------------------------------------------------------
----------------------TCAAAGATTCAGCGGTTATGGGTCTGTACGGTGTACAGAAGACGATTGCTGTAGGGGC
ATGGTATATCTTGTGGCAGCGACAGGAGGTTGTTAATGGAGGAAAGGTGGAACCTGCTAAGTCAACTGTGTTTGCAATTC
AGGCTATTAGCGGGAACTATGCAAAAGCTCTGAGCAGTTCACAACCAGCCCTGATACGATGAGGGAAGCCTCCA-TGGAA
TTCTTATAAACTGAATGTGGATGCATCATCATAC-----TTTGAAAATGGAACAGGGGCAGCAGCTGCGGTCCTCCGCAA
TGATCATGGTGAACCGGTCACTGGGCTCTTGATCACATGTTGGACTCGGCCACGGTGGAGGCGACCGCTATCCAGAAGGG
--------CCCGGAACTGGTTGAAAACTTGGGATGTAA-CACCATCATCGTCGAGCCTGACTGCCTGGAAGTGATTCAAG
CATGCAATGGTTTGTTTGGTCAAGGTATTTAAGTGATCATGTTTA--------------
>SNPs
-------------------------------------------SSSSSSS-SSSSSSSSSSSSSS---------------
-S--S--S-----------------S---------S---------------------S---------------------S
------------------------------S-------------------------------S-----------------
--------------S----SS-----------------S-----------------------------------------
S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-SS----S--------------------------
------S-----S-------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---S------S------------------------------SS--------------SS------------
S----------S----------S-------------------------------------------------------S-
--S--S-----------------S--S-------S-----------S----SSSSSSSSSSSSS---S------------
-------S----SSSSS--S-S----------------------------------------------------------
------------------------------------------------S---------------S--SS---------S-
----S----SSSSS-------S---------S------------------------------------------------
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----------------------------------------------------------S--S-------------S----
--------------------------------S-----------------------------------------------
--------------------S-----------S--S---------S---S--S----------------S----------
SS--------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------S------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------S-------------S------------S--------------
-------------------------------------------------------S------------------------
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----------S---------------------------------------------------------------------
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---S-----------------------------------S----------------------S-----------------
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------------------------------------------------------------------S-------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------SS---------
-------------S------------------------------------------------------------------
---------S-------------------------S--------------------------------------------
---------S------------------------S---------------------------------------------
---------------------------------S------------------------------S---------------
-------------------SS----S----------------------------------------------S-------
--------------------------S-SS--------------------------------------------------
---------S------------------------------------------S---------------------S---S-
SS-SSS-----------------------------------------------------------------S-S------
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------------------------------S------------
--------------------------------------------------------------------------------
---------------S---------------------------------------------------------SS-----
--------------------------------------------------------------------------------
------------------S-----------------------------------------------S-------------
-----------S--------------------------S-----------------------------------------
-S-------------S-----------------------------SSSSSSSSSSSSSS
>forward_542
--------------------------------------------------------------------------------
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------------------------------------------TTGCCGATGTACATGCCCTT------------------
--------------------------------------------------------------------------------
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>reverse_3640
--------------------------------------------------------------------------------
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---------------------------------------TAACCAACAGTGGGTACTATGTTCT----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_2076
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--------------------------------------------------------CTGCGTTCTTCCTTCTCCCC----
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>reverse_4070
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---------------------------------------------------------------------AGAGTCCGCTG
AACGAGAAA-----------------------------------------------------------------------
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-----------------------------------------------------------
>forward_2230
--------------------------------------------------------------------------------
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--------------------------------------------------GTTCCCACCTCCAACACTCG----------
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>reverse_4170
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---------ACAAGAGGGCTGAGGTCGT----------------------------------------------------
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>forward_3827
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----------------------------------------------GACACGAGTCATCCTCAGCAT-------------
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>reverse_4781
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------------------------------------------------------------TGATCAACCACGGGTCAGTG
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
