>input_sequence_35566
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--------------------------------------------------ATGGCCTCCTCCTCC---------------
TCGCCGTCGCCGTCGCCGCCGGCGCAGGCGCGCGTCGGCCGCAACCTCCTAGAGGAGTGGAGCGGGCGTGTGAGGGCGAT
TGAGGCGGGGTTCCGCGCCTGGATGGCGAAGCAGCCCATCCATGTCGAGGCGGCGGTGACCACGGCGGCGGGGGCGGTCC
AGGGCGGGGCGCTCGGGGGCCTCATGGGCTCCATCACCGCCGACGGGGGAGCGTCGTGGGTGCCGCCGCTTCCCCCCAAC
GCCGACCCGCAGGCCATGGCGTCCTTCAAGCAGGCGCAGGTTGCCAACCCTACCTACATACAGCATCCTCCTCTGCTTTT
TTTATCTTATT---TTCTGTTGATGAATTAATTGTCCATGATAACCGGTAACGATTGTGTGTACGATTGGAACATGTTTT
CTCATAATTTATTTGCAATATTGGCTTGTG---------------------ATCTATAGTCAACAACATAGGTTAAGGCC
TGCATTTTCAC-TTGATGACATACCA--AAATGTTGGCCGGACAG----ATATCTCATGAATCCTAAGTTTTGAAATTTC
ACATGATGGTCACCAGCCTGCTATCTTGCCTTTCAGGCTTTAGCTGCTGGGCCATTGGTGCAAGCCCGCAACTTTGCAGT
TATGTCTGGCACAAACGCAGGCATCTCATGTGTTATGAGAAGAATACGCGGAGTAGAGGACATCCAGGGCAGGTGAGGCT
TAGGCATTTCATTTTTATTTGGCAGATTTCAAGGACTATTATAGCTTATATCGTCAGTGTGGTGTCCCGTACATGTGTTT
TA----ATCTTGGCAATGATT-----------------------------------------------------------
----AGGTTTCTGGTTGCTAATTCTTTAACCCCAATTAAGAAATCGATACTTGTCACCTTATGCATGACAGACATCCTAT
TTGTATTTTTTATAGCATGGCAGCCGCTTTTGGTTCCGGTGTTCTCTTCTCTCTAGTGAGTGGAATGGGAACTCCTACTC
CTAATCCGGTCGCAAGTGCAATCACATCCGGTGTTGGTTTTGCGGTGTTTCAGGGTGGCTTTTTCATGGTAATGATCTAA
TCATCTTTGTTGGTTATATTAC---AATTTGGATTCATTTTTCTGTGCAGTCCATCTTGCCACTAAA-TTTCCATGTTGA
TGAAAGGTCAATTTGCTCTTCTGTTGCTATTTCTGG-------------------------TTAATAATTGAGTAAACGG
ATAATGTTTTGCCTGCCATGTGGAGATTACGGTTGCTTCTGTACATTAGACGAATCATGACCAACTTTAAAGTAGATACA
GTATGTGCTTCACCAGATCATTATAAACCGGCATTTACCTTTTAAAATTCATAATTAATTCTATTTTGATGGTATGGCTT
GCATGGAAATGTGGGGCATATAAAAAAAATTCTGATGGCGAGTTTGCTTGAGCACTTCCATGCCTCCTTTTTTTCTTTCA
GTATTATAAACCTCA-GTGAATTATCTCTAGAACATGGCCAGCATGTAGGAATCGCCTGGAGGCTGGGGCCT-TACAGGC
CTTAGGTCTCCAGAAAACAGAAGAGAAGAACCTTGGGCATGGAAGAGCAACTTTTTGTTTCATGGCAGCAGGATGGAATT
TTTTTAAGAAAAAAATGC------TTAGACTTTTGCTAAATTGTGAGTGTAAATACACACACATATTATGCTGATACTAT
TATGGTAAAATCGAAAGGGATGCTTCTCTTTTTTTTTTCCCAAATCTTCTTTGCTTTGATGAAATTACTACGTATTTGGT
TGCCTTGTCATCAACCCACAACTAGCTGATATATGTT----GGTCTGGCATTCATATTATGTAATAAATAATTCTGCTTA
TGGGTATGTAGATTGGGCAGAGGTTCTCAAAACCACAGGGTGTGAGTGAACCTAACTACTATGCCAGGACAAGTAGCATG
TTACAAAATCTGGGCCTCGAGAAATATGAGAAGAATTTCAGGAAGGGTCACCTTACTGATCATACCTTGCCCCTCCTTAC
TGACAGGTAAGTTTATCTAGGTCCAGTTGTGTTCGATACCCT----TTTAGTTATGCATGTAAGATGTATTATTTCATT-
TACTCTACTTCATGTTGCCTCATTAGTGCGTTGAAAGATGTGAAGATCCCCCCTGGCCCCAGATTGATCATACTTGATCA
AATTAAAAGGTTTGGGATCGTTCCACAAGAATTTCATGCTTCTAGATCTATTTTTGCTTACTTGAATTTATTTATTTATT
TATTTTATCTATGTCTGTTTATATTTCCCAGGGATCCTGGGCTGGCGAAAGCACAGTGA---------------------
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>chr3B_1_TraesCS3B01G043100
AGCTACAACCAGTGGACCTCATTAAGGAATAGAAAGTAGAGATTCTAGTACACATGCATCTCGACTTTCTACTCCAACTT
TTTCAGCTTTTTACATCAAACCACATTTTTTCGTTTCAAGCACCCGCCTCCTGCAGAGGATCCCGCTTCCCCATCCGAAT
CTATTTCTCCTGACATCCGATCCTACAAGGCAAGCGGGGCATCACCTTGGGGCTATGCATTGGCCATGTCCTTATCTCTT
CCTCATAGTGACGTCTTTCGCCGCCGTTTTCTGCCTAATTTTTTCCTGGTTTCTCTTTTTGTTATTTCAGTTGCTCTTAG
CTTGGTCTTCTCTTTTATTTTCTCTAATATTTTTTCCAGATTTTTTATTTTCCCTCTTTTGATTTTTATG-------TCA
TTGTTCATTGTTCATTTTATCAATTTATCTTTCTTTTAACAATGAATGAACATTCCTTAAATCCGTGAAGTTTTTTT-TT
AAAATTGTGAACTTTTACTAATTGTGCAGCATCTAATAAAATGTGTGACCCTTTTTAAAATTCATGAACATTTTTGAGAA
TCATTGAACATTATAATAAATTGAATAACACTTTATAATAAATCGATT-ATTTTTTTAATTCGTGATCATTTTCCAAATT
CACAAACGATTTTAATCCGTGTACATTCTTTTTAAAAACTCATGAACGTTTTCTTTACAATAAAGAAGTTATTTTAATGA
TCCTAAAAAAAATTCTATTTTTTTTGAGCGGTTCAAAAAATTTCTATTAATCTGTGAGTGCAGCAGGGATCAATCGACTT
TATTTTTCCTATCAAACAGTACAGCTATTTTTTTTCTGTTACTAAAAAACTATTTTTTTTCTTCCACGAAGAGAGCGCTA
TTTGCGCGGCCCATGTGCGCGATCTGGCAACTATCCTACGCTACATGCGAAGAAAAGTATAGGTTGGCCGTTTTCTAAGG
CGCCGAGACGCGAGGGGAAGGCGAGAGAAGCAGAGGGGA-TTCGGTTGCGATGGCCTCCTCCTCC---------------
TCGCCGTCGCCGTCGCCGCCGGCGCAGGCGCGCGTCGGCCGCAACCTCCTAGAGGAGTGGAGCGGGCGTGTGAGGGCGAT
TGAGGCGGGGTTCCGCGCCTGGATGGCGAAGCAGCCCATCCATGTCGAGGCGGCGGTGACCACGGCGGCGGGGGCGGTCC
AGGGCGGGGCGCTCGGGGGCCTCATGGGCTCCATCACCGCCGACGGGGGAGCGTCGTGGGTGCCGCCGCTTCCCCCCAAC
GCCGACCCGCAGGCCATGGCGTCCTTCAAGCAGGCGCAGGTTGCCAACCCTACCTACATACAGCATCCTCCTCTGCTTTT
TTTATCTTATT---TTCTGTTGATGAATTAATTGTCCATGATAACCGGTAACGATTGTGTGTACGATTGGAACATGTTTT
CTCATAATTTATTTGCAATATTGGCTTGTG---------------------ATCTATAGTCAACAACATAGGTTAAGGCC
TGCATTTTCAC-TTGATGACATACCA--AAATGTTGGCCGGACAG----ATATCTCATGAATCCTAAGTTTTGAAATTTC
ACATGATGGTCACCAGCCTGCTATCTTGCCTTTCAGGCTTTAGCTGCTGGGCCATTGGTGCAAGCCCGCAACTTTGCAGT
TATGTCTGGCACAAACGCAGGCATCTCATGTGTTATGAGAAGAATACGCGGAGTAGAGGACATCCAGGGCAGGTGAGGCT
TAGGCATTTCATTTTTATTTGGCAGATTTCAAGGACTATTATAGCTTATATCGTCAGTGTGGTGTCCCGTACATGTGTTT
TA----ATCTTGGCAATGATT-----------------------------------------------------------
----AGGTTTCTGGTTGCTAATTCTTTAACCCCAATTAAGAAATCGATACTTGTCACCTTATGCATGACAGACATCCTAT
TTGTATTTTTTATAGCATGGCAGCCGCTTTTGGTTCCGGTGTTCTCTTCTCTCTAGTGAGTGGAATGGGAACTCCTACTC
CTAATCCGGTCGCAAGTGCAATCACATCCGGTGTTGGTTTTGCGGTGTTTCAGGGTGGCTTTTTCATGGTAATGATCTAA
TCATCTTTGTTGGTTATATTAC---AATTTGGATTCATTTTTCTGTGCAGTCCATCTTGCCACTAAA-TTTCCATGTTGA
TGAAAGGTCAATTTGCTCTTCTGTTGCTATTTCTGG-------------------------TTAATAATTGAGTAAACGG
ATAATGTTTTGCCTGCCATGTGGAGATTACGGTTGCTTCTGTACATTAGACGAATCATGACCAACTTTAAAGTAGATACA
GTATGTGCTTCACCAGATCATTATAAACCGGCATTTACCTTTTAAAATTCATAATTAATTCTATTTTGATGGTATGGCTT
GCATGGAAATGTGGGGCATATAAAAAAAATTCTGATGGCGAGTTTGCTTGAGCACTTCCATGCCTCCTTTTTTTCTTTCA
GTATTATAAACCTCA-GTGAATTATCTCTAGAACATGGCCAGCATGTAGGAATCGCCTGGAGGCTGGGGCCT-TACAGGC
CTTAGGTCTCCAGAAAACAGAAGAGAAGAACCTTGGGCATGGAAGAGCAACTTTTTGTTTCATGGCAGCAGGATGGAATT
TTTTTAAGAAAAAAATGC------TTAGACTTTTGCTAAATTGTGAGTGTAAATACACACACATATTATGCTGATACTAT
TATGGTAAAATCGAAAGGGATGCTTCTCTTTTTTTTTTCCCAAATCTTCTTTGCTTTGATGAAATTACTACGTATTTGGT
TGCCTTGTCATCAACCCACAACTAGCTGATATATGTT----GGTCTGGCATTCATATTATGTAATAAATAATTCTGCTTA
TGGGTATGTAGATTGGGCAGAGGTTCTCAAAACCACAGGGTGTGAGTGAACCTAACTACTATGCCAGGACAAGTAGCATG
TTACAAAATCTGGGCCTCGAGAAATATGAGAAGAATTTCAGGAAGGGTCACCTTACTGATCATACCTTGCCCCTCCTTAC
TGACAGGTAAGTTTATCTAGGTCCAGTTGTGTTCGATACCCT----TTTAGTTATGCATGTAAGATGTATTATTTCATT-
TACTCTACTTCATGTTGCCTCATTAGTGCGTTGAAAGATGTGAAGATCCCCCCTGGCCCCAGATTGATCATACTTGATCA
AATTAAAAGGTTTGGGATCGTTCCACAAGAATTTCATGCTTCTAGATCTATTTTTGCTTACTTGAATTTATTTATTTATT
TATTTTATCTATGTCTGTTTATATTTCCCAGGGATCCTGGGCTGGCGAAAGCACAGTGAAAACTTGCCTCTTCTATCTGC
TGGTGCTTCTTTTTTAGTTTTATTATACAGATAGTACCATCCGGAGCTATGTCCGTCTCTGTTTTCATGATAACCTGTCT
GGGCACCGCCACTTAATCTGAAGGCGGGAGTAGTTTTCGTTTGTCTAGTTATTATTAGA--CTGCG-----TTTTGCAGT
TCCTTATTTGATTTCTGGTAACAATTCTTTCGCTGATAACTGATTTCTGGTAATAATTAGTTGCCTGCATCTTTGAGTTC
CAACCCAGTCACTCTACTCTGTAACTCAAATAGCAATGTGTGATTTGTTGAATTTTGCAATAGATCACCGTCTTT--TGG
TAAAAGTCTGCAATCAAAAATGAAATTTCTGTTGAGGTGAATCTGTGGGCATTCACTCCGGCAG---CGGTCAAACAGAC
TCTGTCACCGCCGTGCACTCCGACCCGCCCGTGGGAGGCTCATAGATTTATGACACATTTCATTGCCAAAGTCCAAGAAT
AGCAGCAAAGCCCTCATCCCTGAAGCTGTTGTTGTTGGTAGCGTTCTGAGTAGCCTTGAGTAGCTTGTTTGGTTACTAGA
ACTATCTTTTTTTCTTTTGGCTTTGCTTGCGGGCTGAGTTCAGATATTTGCAGTAACCAAACGAAAATATCTGAAGTCAG
CCCGCAAGCAAAACGAAAACAGAGATAGTTCCAGTAACCAAACAAGCAACTATAGTTTTTTGGTTTCTGCCGAGGCAGTG
TTTCTGCTGGCCCTCCGCATGCTTGTAATTGATGATATGGTTTCGTTGGTAATGGAAAGGAGCCGGGGTCTAC-------
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------------------------------------------GGTATCACTACACCGACAAGATTTTAGCTCGACGAACC
TGATCACGCCATTGCTTATAGTGACGTCGTGGAACGGCTGTGCATAGATATTGTCAACTCCCATGCCGAACTTTGACACC
AGATCGCTAGGGATCGGAACAGGCCATTGGATCAAATGCATGACAGGATATTGGTCGAGCACGTTGCATAGAAGAATGCC
>chr3A_1
AGCTAAAACTAATGGACCTCATCAAGAAATAGAAAGTAGAGATTCTAGTACACATGTATCTCTACTTTTCACTCCAACTT
TTTCAGCTTTTTACATCGAACCACACTTTTTCTCTCCAGGCACCCGTCTCCTGCAGAGGATCCCGTTTTCCCATCCCAAC
CTATTTCTCCTGGTATTCGATCCTACAAGGCATGCGGGGCATCACCTTGGGGCTATGCATTGGCCATGCCCTTATCTCTT
TCTCGTAGTGACGTCTTTCGCCGCCGTTTTCTGCCTGATTTTTTCCTTGTTTCTCTTTTTGTTATTTTAGTTGCTCTTAG
CTTGGTC------------TTCTCTAATATTTTTT-CAGATTTTTTATTTTCCCTCTTTTGATTTTTATTTCATTGTTCA
TTGTTCATTGTTCATTTTATCAATTTATCTTTCTTTTAACAATGAATGAACATTCCTTAAATCCGTGAAGTTTTTTTTTT
AAAATTGTGAACTTTTACTAATTAATTAACA--------------------TTTTTAAAATA------------------
--ATTGAACATTATAATAAATTGAAGAACACTTTATAATAAATCCATGGATTTTTTTAATTCGTGATCATTTTCCAAATT
CACGAACGATTTTAATCCGTGTACATTCTTTTTAAAAACTCATGAACGTTTTCTTTACAATAAAGAAGTTATTTTAATGA
TCCTCA----------------------------AAAAAAGTTCTATTAATCTTTGAATGCAGCAGGGATCAATCGACTT
TATTTTTCCTATCGAACAGTACAGCTATTTTTTT-CTGTTACTAAAAAAAACTATTTTTTCTTCCGCGAAAAGAGCGCAA
TTTGCGCGGCCCATGTGCGCGACCTGGCAACTATCCTACGCTAC-TGCGAAGAATAGGC-----TGGCCGTTTTCTAAGG
CGCCGAGACGCGAGGGGAAGGCGA--GAAGCAGAGGGGA-TTCGGTTGCGATGGCCTCCTCCTCGCCGTCGCCGTCGCCG
TCGCCGTCGCCGTCGTCGCCGGCGCAGGCGCGCGGCGGCCGCAACCCGCTGGAGGAGTGGAGCGGGCGCGTGAGGGCGCT
GGAGGCGGGGTTCCGCGCGTGGATGGCGAAGCAGCCCATCCATGTCGAGGCGGTGGTGACCACGGCGGCGGGGGCGGTCC
AGGGCGGGGCGCTCGGGGGCCTGATGGGCTCCATCACCGCCGACGGGGGAGCGCCGTGGGTGCCGCCGCTCCCTCCCAAC
GCCAACCCGCAGGCCATGGCCTCCTTCAAGCAGGCGCAGGTTGCGAACCCTA----CATACGGCACCCTCCTCTGCTTAT
TTTATCTTATTATTTCCTGTTGATGAATTAATTGTCCGTGATAACCGATAACGATTATGTGTACGATTGGAACATGTTTT
CTCATAATTTATTTGTTATATTGGTTTGTGACCCGTCACTTTTGATTCCTGATCTATAGT-------------TAAGGCC
TGCATTTTCACCTTGATGACATAGTAGCAAATGTTGGCCAGACAGACAGATATCTCATGAATCCTAAGTTTTGAACTTTC
ACATGATGCTCACCAGCCTGCTTTCTTGCCTCGCAGGCTTTAGCTGCTGGACCGTTGGTGCAGGCGCGGAACTTTGCAGT
CATGTCTGGTACAAACGCAGGCATATCATGTGTTATGAGAAGGATACGCGGAGTAGACGACATCCAGGGCAGGTGAGGCT
TAGGTATTCCATTTTTATTTGGCAGATTTCAAGGACTAT---AGCTTATATCATCAGTGGGGTGTCCCATACATGCGTTT
TATTTAATCTTGGCAATGCAAAGATGCAATTGACCTTCCTTTTGGTAATTATTATCCAAAGGATGGTCCTTATTGCACAG
CTTCAGGTTTCTGCTTGTTAATTCTTTAACTCTAATTAAGAAATCCATACTTGTCACTTTATGCATGACAGATATCCTAT
TTGTATTTTTTATAGCATGGCAGCCGCTTTTGGTTCCGGTGTTCTGTTCTCTCTAGTGAGTGGAATGGGAACT------C
CTAATCCGGTCGCAAATGCAATCACATCCGGTGTTGGTTTTGCGGTATTTCAGGGTGGCTTTTTCATGGTAATGATCTAG
TCATCTTTGTTGGTTAT--TAC---AATTTGGATCCATTTTTCTGTGCAGTTCATCTTGCCACTAAATTTTCAATGTT-A
TGAAAGGTCAATCTGCTATTCTGTTGCCTGCTTATGATCTTTTCTGGTTTGGATGTGTACATTAATAATTGAGTAAACGG
ATAATGTTTTGGCTGGCATGTGGAGATGACAGGTTCTTCTGTACATTAGACGAATCATGACCAACTTTAAAGTAGATACA
GCATGTGCTTCACCAGAGCATTTTGAACCGGCATTTACCTTTTAAAATTCATAATTAATTTTATTTTGATGGTATGTCTT
GCCTGGACCT----------------------------------------------------------------------
---------------C-TGAATTATCTCTAGAACATGGCCAGCATGTAGGAATCGCCTGGAGGCTGGGGCCTTTACAGGC
CTTAGGTCTCCAGAAAACAGAAGAGAAGAACCT-GGGCATGGAAGAGCAACTTTTTATTTCATGGCAGCTGGATGGAATT
TTTTTAAGAAAAAATTGC------TT-------TGCTAAATTGTGAGTGTAAACACACAAACACA------------CAT
TATGGTGAAATCGAAAGGGATGCTTCTCTTTTCCCCC-CCCAAATCTTCTTTGCTTTGATGAAATTACTACGTATTTGGT
TGCCTTGTCATCAACCCACAACTAGCTGATATATGTT----GGTCTGGCATTCATATTATGTAATAAATAATTCTGCTTA
TGGGTATGTAGATTGGGCAGAGGTTCTCAAAGCCACAGGGTGTGAGTGAACATAACTACTATGCCAGGACAAGTAGCATG
TTACAAAATCTGGGCCTCGAGAAATATGAGAAGAATTTCAGGAAGGGTCACCTTACTGATCATACCTTGCCCCTCCTTAC
TGACAGGTAAGTTTATCTAGGTCCAGTTGTGTTCGATACCCTTT-TTTTACTTATCCATGTAAGATGTA----TTCATT-
TACTCTACTTCATGTTGCGTTATTAGTGCTTTGAAAGATGTGAAGATCCCCCCTGGCCCCAGATTGATCATACTTGATCA
AATTAAAAGGTTTGGGATCATTCCACAAGAATTTCATGGTTCTAGACCTATTTTTGCTTACTTGAATTAATTTATTTTT-
-------TCTATATCTGTTTATATTTCCCAGGGATCCTGGGCTGGCCAAAGCACAGTGAAAACTTGCCG---CTATCTGC
TGGTGGTTATTTTTTTAGTT--TTATACAGATAGTATCATCCGGAGCTATGTCCATCTCTGTTTTGATGATAACCTGTCT
GGGCACCACCACTTAATCTGAAGGCGGAAGTAGTTTT-GTTTGTCTAGTTATTATTAGA--CTGTGAGCGCTTTTGCAAT
TCCTTATTCGATTTCTGGTAATAATTTTTTCATTGATAACTGATTTCTGGTAATAATTAGTTGCCTGCATCTTTGAGTTC
TCCACCACTCATTCTACTCTGTAACTCAAGTAGCAAAGTGTGATTTGTTGAATTTTGTAATAGATCACAGTTTTT--GGG
TAAAAATCTGCAATGAAGAATGAAATTTATGTGGAGGTGAATTTGTCAGCATTTGCTCCGGCAG---CGGTCAAACGGCC
TCTGTCACCACCGTG-----------------------------------------------------------------
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>chr3D_847
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-------------------------------------------------------TTTTTCGTCCGCGAAGAGAGCGCTA
TTCGCGCGGCCCATGTGCGCGACCTGGCAACTATCCTGCGCTACATGCGAAGAATAGGC-----TGGCCGTTTTCTAAGG
CGCCGAGACGCGAGGGGAAGGCAA--GAGGCAGAGGGGATTTCGGTTGCGATGGCCTCCTCCTCGCCGTCGCCGTCGCCG
------------------CCGGCGCAGGCGCGCGGCGGCCGCAACCCGCTGGAGGAGTGGAGCGGGCGCGTAAGGGCGCT
GGAGGCGGGTTTCCGCGCGTGGATGGCGAAGCAGCCCATCCACGTCGAGGCGGCGGTGACCACGGCGGCGGGGGCGGTCC
AGGGCGGGGCGCTCGGGGGCCTCATGGGCTCCATCACCGCCGACGGGGGAGCGCCGTGGGTGCCGCCGCTCCCTCCCAAC
GCCAACCCGCAGGCCATGGCGTCCTTCAAGCAGGCGCAGGTTGCCAACCCTATATACATACGCCATCCTCCTCTGTTTAT
TCTATCTTATT---TCCTGTTGATGA----ATTGTTCATGATAACCGATAACGATTATGTGTATAATTGGAACATGTTTT
CTCATAATTTGTTTGTAATATTGGCTTGTGACCCGTCACTTTTGATTCCTGATCTATAGTCAACAACATAGGTTAAGGCC
TGCATTTTCACCTTGATGACAG---AGCAAACGTTGGCCTGATAGAT--ATATCTCACGAATCCTAAGTTTTGAACTTTC
ACATGGTGGTCATCAGCCTGCTTTCTTGCCTCGCAGGCTTTAGCTGCTGGACCGTTGGTGCAAGCGCGCAACTTTGCAGT
TATGTCTGGTACAAACGCAGGCATATCATGTGTTATGAGAAGGATACGCGGAGTAGATGACATCCAGGGCAGGTGAGGCC
TAGGTATTTCATTTTTATTTGACAGATTTCAAGGATGCAATC--------------------------------------
-----------------------------------------------------ATCCAAAGGATGGTCCTTATTGCACAG
CTTCAGGTTTCTGGTTGTTAATTCTTTAATTCCAATTAAGAAATCGATACTTGTCACTTTATGCATAACAGACATCGTAT
TTGTATTTTTTATAGCATGACAGCCGCTTTTGGTTCTGGTGTTCTGTTCTCTCTAGTGAGTGGAATGGGAACT------C
CTAATCCGGTCGCAAATGCCATTACATCTGGTGTTGGTTTTGCGGTATTTCAGGGTGGCTTTTTCATGGTAATGATCTAA
TCATCTTTGTTGGTTAT--TACTAGAATTTGGATTCATTTTTATGTGCAGTCCATCTTGCCGCTAAATTTTCAATGTCGA
TGAAAGGTCAATTTGCTGTTCTGTTGCCTGCTTATGATCTTTTGTGGTTTGGATGGGTACATTAATAATTGAGTAAACGG
ATAATGTTTTGCCTTGCATGTGGAGATGACAGTTGCTTCTGTACATTAGACGACTCATGACCAACTTTAAACTAGATACA
GCATGTGCTTCACCAGAGCATTATGAACCGGCATTTACCTTTTAAAATTCATAATTAATTTTATTTTGATGGTACTGCCT
GCATGAAAATGTTGGGCATATCAAAAATATTCTGATGGCGAGTTTGCTTGAGCTCTTCCATGCCTCCTTTTTTCCTTTCA
GTATTATAAACCTCAC-TGAATTATCTCTAGAACATGGCCAGCAAGTAGGAAAAGCCTGGAGCCTGGGGCCT-TGCAGGC
CTTAGGTCTCCAGAAAACAGAAGAGAAGAACCTCGGGCATGGAAGAGCAACTTTTTGTTTCATGGCAGCTGGATGGAATT
TTTTTAAGAAAAAATTGCTTGACTTT-------TGCTAAATTGTGAGTGTAAACACATGCACATATTATGCTGATGCCAT
TATGTTGAAATC-AAAGGGATGCTTCTCCTTTTT-TTTCCCAAATCTTCTTTGCTTTGATGAAATTACTACGTATTTGGT
TGCCTTGTCATCAACCCACAACTAGCTGATATATGATTGTCGGTCTGGTATTCATATTATGTAATAAATAATTCTGCTTA
TGGGTATGTAGATTGGGCAGAGGTTCTCAAAGCCACAGGGTGTGAGTGAACATAACTACTATGCCAGGACAAGTAGCATG
TTACAAAATCTGGGCCTCGAGAAATATGAGAAGAATTTCAGGAAGGGTCTCCTTACTGATCATACCTTGCCCCTCCTTAC
TGACAGGTAAGTTTATCTGGGTCCAGTTTGTGTTCGGTAATACCCTTTTAGTTATGCATGTAAGATGTA----TTCATGA
TACTCTACTTCATGTTGCCTTATTAGTGCTTTGAAAGATGTGAAGATCCCCCCTGGCCCCAGATTGATCATACTTGACCA
AATTAAAAGGTTTGGGATCATTCCACAAGAATTTCATGGTTCTAGATCTATTTTTGCTTACTTGAATTTATCTATTTG--
------ATCTATATCTTTTTGTATTTCACAGGGATCCTTGGCTGGCGAAAGCACAGTGAAAACTTGCCG---CTATCTGC
TGGTGCTTC-TTTTTTAGTT--TTATACAGATAGTATCATCCGGAGCTATGTCCATCTCTGTTTTGATGATAACCTGTCT
GGGCACCGCCACTTAATCTGAAGGCGGAAGTAGTTTTTGTTTCTCTAGTTATTATTAGACTCTGCG-----TTTTGCAAT
TCCTTATTTGATTTCTGGTAATAATTTTTTCGCTGATAACTGATTTCTGGTAATAATTAGTTGCCTGCATCTTTGAGTTC
CAACCCAGTCATTCTACTCTGTAACTCAAATAGCAATGTGTGATTTGTTGAATTTTGTAATAGATCACAGTTTTTTTTGG
TAAAAACCTGCAATCAAGAATGAAATTTCTGTGGAGGTGAATCTGTGAGCATTCGCTCCGGCAGCAGCGGTCAAACAGAC
TCTGTCACCGCCGTGCACTCCGACCCG-CCGTGGGAGGCTCATAGATTTATGACACATTTCATAGCCAAAGTCCAAGAAT
AGCAGCAAAGCCCTCATCCCTGAAGCTGTTGTTGTTGGTAGCGTTCTGAGCAGCCGGGGTCT------------------
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---------------------------------------------TTGGTAATGGAAAGGAGCCGGGGTCTTTGGCACTT
TCTCTCTAGAAGAAAGAAAGAAAGAAAGTCGTCTCTACAATCTCCCCGTCAGCCCAACGCCTCTCGCTCGGCAGTCAATC
GTAGTCATAGGCTTGAACCGTGTTAAACGACTTGTAGTGTGCCTTCGGTACTGAACTCAGCCGTGTAGGATACTGAACTT
GTGCAGATAACTTGCTATGAAGAAGACCTGGGACTGATTTGCAGGCTGAAGCCTTTGTACTCTCCAAGCTAAGTTAGTTT
TTCTGTTGTCGGCATTAGCTATGCAGTCATGTAAACTGCAAGAAAAGAAAAGAGAAACCGGTTGTACTCGATCAGTTGTC
CCTCCCTTCTGTAGCCGATCAAAGCTTTAGCCCAAACTAAATTAGTTAATTGGTCTGTTACTTTGTTCCCAGTTCTAGGA
TAATTGCTCAGGCATCATAAATGAGCTCTGAACCGACACTCATCTTCCAGCTGAGTTAATAGATATACGAGGTGGAAGAA
GCATTGTTGTCAATTGCAACTGATGTTCAGCCGCAAAGAGTTTGCACTACCAACATTATTCCTATGTTGCAACGAGTTCG
TCTGATGACAATAAGGCATATAGCAAAAAAGAGATAGGAGTTTCGGATATTCCTGTTCATGTCAATTTCTCGTAACTCAA
CTCGACTCATAAAGAAAGACCACACATCAATAAGAAGCACATGTAACCCTATCATCGCTGAGGAATAAACTCGTTGTTTG
ATCGTGATAAAACTGAATAAGAAGCACGTACATGCTATAAAGTTGGCAAGCTATAAATCATGAATCAAGATTGCTAATAC
AAGTACTTATATCCGACTTCTCCATAGTTTCCCTCCAAGGTCCCCTTTCTCATCACCTTTTCCGCTGCTTGAGGTAGTCG
GACAAGGCACATTGAACATAAGTCGGTTCAAGGCCGGGCATCTTTTCAGTAGAACACTGCTTGATCGCTGCTAGTGTTCC
CTCTCTAATGTTAATGGCAAGCATCCATGCAACCGTGGGGCGGATGTCCAGTCTAGCCATAATGTAGACGACATCTTCGT
CACACAAGCTAAGAGTGGGCGCACCGTGAACCACCTTGTCCCAGCTCAACCTCTTGCCACCCAATACGTTAGGGTAACTT
GAATCAGTGACAGGCACATTATCAGCCTTGACAGTGAACTTTTTGTTCCACTTATTTGAGAAGATTGCCCTGCTCCATGT
CGTGATCGTCCAGCCTTGGCCAATGACCCCTTTCTCATTACGGGTATCACTACACCGACAGGATTTTAGCTCGACGAACC
TTATCACGCCATTGCTTATTGCGATGTCGCGGAACGGTTGTGCATAGATATTGTCGACTCCAATGCCGAACTTTGACACC
AGATCGCTAGGGATTGGAACTGGCCATTGGATCAAACGCATGACAGGATATTGGTCAAGCACGTTGCATAGAAGAATGCC
>chr3B_1804
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------GTTTCTTGTTGTTAGTTCATTAATTCCAATTAATAAATAGATACTCGTTACTTGATGCATGAAAAACATTCTAG
TTGTA-TTTATGTAGCATAGCAGCCGCTTTTGGTTCGGGTTCTCTGTTCTCTCTAGTGAGTGGAATGGGAACT------C
CTAATCCGGTCTCAAGTGCCATTACA-CTGGTGTGGATTTTGCGGTATTTTGGGGTAGCCTTTTCATGGTAATGATCTAG
ACATCTTTGTTGGTTAT--TTC---AATTTGGATTCATTTTTCTATGCAGTTCATCTTGCCACTATTATTTCATAACTGA
TGAAGGGTCAAATTGTTGTTCTGTTGCCTTCTTGTGATGTTTTGAGGTTTGTATTGGAATAT---TAATTAAGTGAACGA
ATGATGTTTTACCTTTCATGTAGAGATGGCGGTTTCTAATGTATATTAGACGAAGCATGATCAACTTTAAATTAGCTACA
ACATGTCCTTCACAGGAGCATTATGAACCGGCATTTACCTTTTGAAATTCATAATTAATTTTATTTGGATGGTATGGATT
GCAGTGAAATGTTGTGTATGTAAAAACAATTTTGATGACAAGTTTGCTTCCGCTCTTCCATGTCTCCTTTCCCTTTCATG
GTTACAAATTCTCACTGTGAAACGTCTCTAGAACATG-------------------------------------------
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>SNPs
-----S---S-S----------S---S-----------------------------S-----S-----SS----------
-----------------S-------S------SS-S--S-------S------------------S--S-------S--S
------------SS--S---------------S-----------------------------------S-----------
S---S-------------------------------S----------S-------------------S------------
-------SSSSSSSSSSSS----------------S---------------------------------S----------
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-----------------------SSSS-S--SSSSSSSSSSSSSSSSSSSS----------SSSSSSSSSSSSSSSSSSS
SS-----------------------S------------------S--S--------------------------------
---S----------------------------------------------------------------------------
----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS------S------------S---S----------------------
-------------S--------------------S--------------SSS-S-----------S--------------
----------------------S-------------------------------S--SSSSSSS----------------
------------------------SS--------------------------------------S---------------
---------------S------------------S-----------SS--S-----------------S---------S-
S-----------------S-------------------------------------------------------------
-----------------------------------------------------S----------------S--S------
---S------------------------------------------------SS-------S----------------S-
---------------S-------------------------------S--------S-----------------------
---------------S----------------------------------------------------------------
-----------------------SS--------------S-----------------------------------S----
----------------------S--------SS-----------------S--S-----------S--------------
---------S--------------S-----------------S--------------S----------------------
----S----------------------------------SSS----------S------S--------S------S----
------------------SSS-----------------------------------------------------------
-----------------S------------S--------------------------S----------------------
---------------------------------------------S---------------------------SSSSSS-
----------------------------------------------S---------------------------------
-----------------SS-----------------------------------------------------S-------
-----------------S---------SS-S-SSS---------------------------------------------
---------------S-----------S----------------------------------------------------
-S---------------S------S-----------------------------------S-------------------
------------S----------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------------------------------S-----------------------------------S----------
--------------S-----------SSSSSSS--------------------S---------------------S-S--
------S---------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S-------------------S----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------SSSS-------
--------------------S--------S--------------------------------------------------
-------------------S------------------S--------------------------------------S-S
SSSSSS------S-------------------------------------------------------SSSS--------
---------------SSS--SS--------------S-----------------S----------S--------------
---------------------------S---------S----------------------------------------S-
---------------------S----S-----------------------------------------------------
-----------S---------------------------------------------S----------S--S--------
-----S-----------S--------------S--------------S------S-------------------------
---------------------------S-----------------------------------S----------------
--------------------------------------------------S----SS-SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------SS-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-S-----------------S-S--S----S-------S-----------------S-----S------------------
--------------S-----S---------------S-------------------S-----------------------
>forward_127
--------------------------------------------------------------------------------
---------------------------TTTTCGTTTCAAGCACCCGC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2079
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
CTAATCCGGTCGCAAGTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1836
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GTGTGGTGTCCCGTACATGT----
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>reverse_3868
--------------------------------------------------------------------------------
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---------------------------CCCGTGGGAGGCTCATAGAT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
