>input_sequence_35541
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-----------------------------------------CCGAAATCGGGGCGGCCCGCCAGCCACAGGATCTTTCCT
CGCTCCCTCCCTCTCTCTC----T--------CGCCGTCGTCGTTGCTTTCCCCCACCCTCTCTCTCTCCCCAGCCCCAC
CCGATTTCCAATCATGGCGCTCGCATCCGGCACCACGGCCCGCCCGCTCCTCGGCCGCCTCCCCGGCACGGCGCGGCCCC
ACCTCGCCGTCTCCCCCTCGCCCTCCGCGCCCGCGTCCTCCGTCCGATTCGCCGCCCGCAGCGGGGGCTCCCGCGCCGTC
TCCCTCCGCGCCTCCGCGCCGCCAGGTCCGTGGTCAAACCAGATGTTAGACGTTCTCCTCCGCGCATATTTTTAAATTGA
AA-TACGTAGGATCGTTTTGGGCTGGAAGGATTCGGATCGAATCCCTTTGCCGGGCCTCTTTTGTTCTTGTGATTTGCGA
GAGCCGGTAAAATGAAGCCGGATTGATGATGCGTAGCTGCCTGCCGTGAGAAATACAGTATGCAGCGATGGCCATAGGG-
----GCTGACCTTGATGTAGCGGTGGTGCGCCTCGTTATCTTGATTCAGGCGGCTGAAAATTGTCTCGATTGGAGTTTGC
TGAACGCGTAGTTGATGGCGTTGCCTGGCCTGTATTGCCTGAGTGAGCTGCTGGTTGCCTGCTCAGTACCGTGTGTGGCA
AATTTGTCCATGTATTGTTGGTGGTTGTCCCCACTAGGCTTGTAATCAGAGCGACCCCATCCTAATTGTAGATCTTCCGT
CCACTGCCCCTAATATTAAACAGTTTAGATAACATGGGTAAAGCAGAGACATGCTC---CTGGACAATCCTATT----TC
TGGTTGCAGTGTCAGCCTATCAGGTGGGAAAGCAGTTACGT---------------------------------------
------------------------------------------------------------------TACGTGTGTGGCAT
GTTTCTGTTTTCTTCTC----TGTG--------CTATTCTGGAGTTTGTTTGTACCAGATAAAATCTTTATATAGGTAAT
AGTGTAATTA-TATACATCTGTTTGATCGTTATATGCTGTATCTGGCATGCCGTATGCAT--------------------
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---------------ATGTCTAGCTATCTGTATCTATCTGG----------AGTAGTTAGGTACTTAGGCCTTGGTTGCA
TTATCCCTATCCATCCAA-GGGGATTAAGCAAAGATGTTGTCTTTATAAGTTCTTTCC-TTGTAAACTTATATATTTTTA
GAAATGTG-------TCACAACTGATGAACAAGATTATTTT------------AGTTGGCTTCAATAACCTGGTCCTTCC
AGTCATCCTACATCACTCATCGGTTCATCTGTCTTGCATGAGCAAGGGAATAGTTGAGGAAACACTGAAGATTTAATGGC
TACAAGATAGTCAGATATATCCTACGATTTTCGGGATTTTAG-ATGCTTCATGCAAATGCTGCAGAATTAGAAAGAATTT
CAGACAAGTTTTGTTCAGCATTAACATAGTAAAATCGTTTACCATACTTTGCAGCAGCTGCAACAGCAACGCCTGGTAGC
ATTGCACCAGCCATCTCATTGACAGAGAAGGCCCTGAAGCATCTGAACAGAATGAGGGCCGAAAAGAATGAAGATCTCTG
TTTGAGGATTGGAGTTAAACAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAGAGCCGAGGAAGCGCCAACC
CTGACGATTCAGTCATCGAGTATGAGGGTTTCACAATAGGTAACTGCTTTGCCTTGAC--TGTATATTCGTTTGAGAGGA
CATGGATTTGCATTTGTGCTCGAGATTAGAGTAACACTTTTGCATTCCAAATAAATCCTTGGAAGGCTTG--AAATAGTC
CACAGGCTGTTGATCACAAGTACATGTGACAACCCATTCTGTTTATTCAGGCCAAACCCACCT------GGTCTACCGGA
ACTCTAACGAGACAATATATTTTGTGCGCCTGCAGTCTGTGACCCAAAGAGCCTTCTCTTCATGTTTGGAATGGAGCTGG
ACTACAGCGACGCTCTCATCGGGGGCGGCTTCAACTTCCAGAACCCAAACGCGACGAAGACGTGCGGGTGCGGCAAGTCG
TTTGCGACCAGCAAGGAAATGCAGAGCACAGCAACTGCCTGCAACAACTGAACTAGAAATATAGTGCCAGGGTGTGATAT
TATCATGCATCTTTGGTTGCTCCTGCATCCGGAAATGGCCGGATGGACAATACCACAGGTTCACAGATATACTCAGAATG
AATGGCTACAATTTGTAATACAGTTCAGTTCAGTGTGTATCAAGATTCCAATGGGGCTTG---TAAGTTGTAACTGCTC-
--AGTAGAATTTTTAAAGATAATCATGTGAAGATAGATA-----------------------------------------
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>chr4A_1_TraesCS4A01G396600
GAACTCAAGGACCGTAAACTATAACAGGAGGTCATCGGTTTGCCAAGGTGGCACTGGAGCGCCTCCCGTACATCTGCATT
CTGCATGATCTTTCTCATGGCGTTGCCTCTGACAGCATTGGTGTTGCGTAGGCTCCTCTAGAGCACATCATCAGCACTAA
CTGATGGTTCGTATTAACCCAAAGATGTAGGCGATGACACTTGGGATCGCCACAGGTAGAGAAAGCGCTAGCCGAGAAGG
TGGAGGTTGCGCCGACTTGGTGACCTCCAGCGCACAATGTCTCGTCCGCCTGACACTTCCATTGTGCCCTTTTGCCTTTC
CATTATGCGTCTTCAAGTACAATCAAACTTCCTTCTTTTTACAGTTCAAAAGTTATCCGTCTTTGGTTCCTCCTCTCCGT
CGCCCTTTGTCTTCTGCACCTCATCTGTCATAGATTCAGCCAGCACCGCCGTGGCACTGCCAATTTAGCAGAAAGAATTT
GATGCACCTAGCGTTGTTGAGAAAGGTGGGTGGGCGTGGAGGCAGCACTTGTGAATTCAGTTTCGGGAGATGGCGATGTT
ACTAGGTCAGATCCAGATGGAGGAAACGTGATGGGATTGAAGAGGATGTAGTTGAGAGAAGAAACAACACATGCAAGATT
GCAGGAAATCGGCACAACAAGAGCTCCGAGTCTCCAGCCGCCCTGCAACGAATTGACAACCAGAGCAAAGGAACCAGAGC
AAAGGGATCTTGGTGTAATTTTTAGTTTGATGCAACTTTTTGCTGTTCTTTGTTTACTTAAGTTGCTTCAATCCATGGTT
ACCATTCTTGTCGGGACATTATAGCATTTTTATTAATCAATAATAAAGTCAAATGGTTGCTACAAAAATAGTGAATCAAC
TGTATAATTCTGTTTAAATGAAGTTAGTTTTTTTTAGAACTGTTCAAATTAAGTTAGTAAAAGTCCATCTCGAAAAT-AT
ACATAATTGTGGACCGCAGAGAGCCCCGAGCCCACAAGCCACCGAAATCGGGGCGGCCCGCCAGCCACAGGATCTTTCCT
CGCTCCCTCCCTCTCTCTC----T--------CGCCGTCGTCGTTGCTTTCCCCCACCCTCTCTCTCTCCCCAGCCCCAC
CCGATTTCCAATCATGGCGCTCGCATCCGGCACCACGGCCCGCCCGCTCCTCGGCCGCCTCCCCGGCACGGCGCGGCCCC
ACCTCGCCGTCTCCCCCTCGCCCTCCGCGCCCGCGTCCTCCGTCCGATTCGCCGCCCGCAGCGGGGGCTCCCGCGCCGTC
TCCCTCCGCGCCTCCGCGCCGCCAGGTCCGTGGTCAAACCAGATGTTAGACGTTCTCCTCCGCGCATATTTTTAAATTGA
AA-TACGTAGGATCGTTTTGGGCTGGAAGGATTCGGATCGAATCCCTTTGCCGGGCCTCTTTTGTTCTTGTGATTTGCGA
GAGCCGGTAAAATGAAGCCGGATTGATGATGCGTAGCTGCCTGCCGTGAGAAATACAGTATGCAGCGATGGCCATAGGG-
----GCTGACCTTGATGTAGCGGTGGTGCGCCTCGTTATCTTGATTCAGGCGGCTGAAAATTGTCTCGATTGGAGTTTGC
TGAACGCGTAGTTGATGGCGTTGCCTGGCCTGTATTGCCTGAGTGAGCTGCTGGTTGCCTGCTCAGTACCGTGTGTGGCA
AATTTGTCCATGTATTGTTGGTGGTTGTCCCCACTAGGCTTGTAATCAGAGCGACCCCATCCTAATTGTAGATCTTCCGT
CCACTGCCCCTAATATTAAACAGTTTAGATAACATGGGTAAAGCAGAGACATGCTC---CTGGACAATCCTATT----TC
TGGTTGCAGTGTCAGCCTATCAGGTGGGAAAGCAGTTACGT---------------------------------------
------------------------------------------------------------------TACGTGTGTGGCAT
GTTTCTGTTTTCTTCTC----TGTG--------CTATTCTGGAGTTTGTTTGTACCAGATAAAATCTTTATATAGGTAAT
AGTGTAATTA-TATACATCTGTTTGATCGTTATATGCTGTATCTGGCATGCCGTATGCAT--------------------
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---------------ATGTCTAGCTATCTGTATCTATCTGG----------AGTAGTTAGGTACTTAGGCCTTGGTTGCA
TTATCCCTATCCATCCAA-GGGGATTAAGCAAAGATGTTGTCTTTATAAGTTCTTTCC-TTGTAAACTTATATATTTTTA
GAAATGTG-------TCACAACTGATGAACAAGATTATTTT------------AGTTGGCTTCAATAACCTGGTCCTTCC
AGTCATCCTACATCACTCATCGGTTCATCTGTCTTGCATGAGCAAGGGAATAGTTGAGGAAACACTGAAGATTTAATGGC
TACAAGATAGTCAGATATATCCTACGATTTTCGGGATTTTAG-ATGCTTCATGCAAATGCTGCAGAATTAGAAAGAATTT
CAGACAAGTTTTGTTCAGCATTAACATAGTAAAATCGTTTACCATACTTTGCAGCAGCTGCAACAGCAACGCCTGGTAGC
ATTGCACCAGCCATCTCATTGACAGAGAAGGCCCTGAAGCATCTGAACAGAATGAGGGCCGAAAAGAATGAAGATCTCTG
TTTGAGGATTGGAGTTAAACAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAGAGCCGAGGAAGCGCCAACC
CTGACGATTCAGTCATCGAGTATGAGGGTTTCACAATAGGTAACTGCTTTGCCTTGAC--TGTATATTCGTTTGAGAGGA
CATGGATTTGCATTTGTGCTCGAGATTAGAGTAACACTTTTGCATTCCAAATAAATCCTTGGAAGGCTTG--AAATAGTC
CACAGGCTGTTGATCACAAGTACATGTGACAACCCATTCTGTTTATTCAGGCCAAACCCACCT------GGTCTACCGGA
ACTCTAACGAGACAATATATTTTGTGCGCCTGCAGTCTGTGACCCAAAGAGCCTTCTCTTCATGTTTGGAATGGAGCTGG
ACTACAGCGACGCTCTCATCGGGGGCGGCTTCAACTTCCAGAACCCAAACGCGACGAAGACGTGCGGGTGCGGCAAGTCG
TTTGCGACCAGCAAGGAAATGCAGAGCACAGCAACTGCCTGCAACAACTGAACTAGAAATATAGTGCCAGGGTGTGATAT
TATCATGCATCTTTGGTTGCTCCTGCATCCGGAAATGGCCGGATGGACAATACCACAGGTTCACAGATATACTCAGAATG
AATGGCTACAATTTGTAATACAGTTCAGTTCAGTGTGTATCAAGATTCCAATGGGGCTTG---TAAGTTGTAACTGCTC-
--AGTAGAATTTTTAAAGATAATCATGTGAAGATAGATATACTTCTTTCTCATTCTGATTATAAGCTACTCCCTCCGTCC
CATAAGGTAAGACGTTTCTTGGCACTAGTGTAGTGTTAAAAAACATCTTATATTATGGGACAGAGGGAGTAGACGAGTGC
ACACTACGCCTCTCAGTTTGCGAAGTGCTTATTTTTGTAATCTGATGTCGAAAATCAGCCGCAAAAGTAGTAAAAAAA-G
GGATCAAACGAACACCAAAATACACAAAAAGTCGGTTCAACAAATAGGATTATGATAATGCATTTGATATTCTCTAGTTG
CCTGAAAATGAGAGGCCTGTAAGTTGATTTTGGTAGGTGGAGCTGGAGCTGGAGCTGGGGGCGGGGATGACATGGGCGGT
TGTGTCATCGTCGGTAAGGGCGACCCGAGAAATGACTCGGAGATGGGGATTACACGGCTGATCATGGTAAGGGCGACCCG
AGAAATGAGTCGGAGATGGGGATTACACGGCTGATAATGGAGTCACTGGCAAAGCCAAGGCGGAGGTTGATCAGTGTGTG
TGCTTGTGGTGGAGGGGGTTGGGGTCACCGGAGATGGGGATGACACGGTCGACCATGGGGTCGCTGGCAAAGCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC
AAAGCCGAGTTGGAGGTTGACCGGTGTGTGTGCTTCTGGTGGAGGGGGTTGGGGTCACCGCGCTGCAAAGCCGAGGCGGA
GGTTGATCGGTGTGTGTGCTTGTGATGGAGGGGGTTGGGGTCACCGGGGTATAGGGATGACATGGCCGATCATGGGGTCG
>chr7A_938
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---------------------------------------------------------TAAAAGTTCATCCTGAAAAC-AT
TCATAATTATGGACCGCAGAGAGCCCTGAGCCCACAAGCCACCAAACTCGGGGCGGCCCGCGAGCCACAGGATATTTCCT
CGCTCCCTCCCTCTCTCCCGTCTT--------CGTCGTCGTCGCTGCTTTCCCCCACCCTCTCTC----CCCAGCCCCAC
CCGATTTCCAATCATGGCGCTCGCGTCCGGCACGGCGACCCGCCCGCTCCTGGGCCGCCTCCCGGGCACGGCGCGGCCCC
ACCTCGCCGTCTCCCCCTCGCCCTCCGCCCCGGCCTGCACGGTCCGCTTCGCCGCCCGCAGCGGGGGCTCCCGCGCCGTC
TCCCTCCGCGCCTCCGCCCCGCCAGGTCCGTGGTCAACACATATGTCAGATGTTCTCCTCTACGCATATGC---AATAGA
AT-TAAGTAGGATCGTTTTGGCGTGGATGGATTTGGATTGAATCCCTTTGCCGGGCTTCTTCTG---TTGTGATTCGTGA
GAACCCGTAAAATGAAGCCGGATTGAT---GCGTAGCTGCACACCATGTGAAA-----TTTGCAGCGATGGCCATAGGGC
AGGGGCTGATCTTCATGTATCGGTAGCGCGCATTGTTATCTTGATTCAGGCGGCTGGAAATCGT--CGATTGGAGATTGC
TGAGTGCGTAGTTGATGGCGTTGCCTGGCCTGTATTGCCTAAGTTAGCTGCCTGCT--------AGTAGCTTGTTTGGCA
AA------------------GTGGTTGTCCCCACTAGGCTTATAATCAGAGCGACCCCATCCTAATTGTAGATCTTTCAT
CCACGACCCC---TATTAAACAATTTAGACAACATGGGTAGATCGGACACATGCTC---CTAGGCAATCCTACT----TC
TGGTTGCAGTATCAGCCTATCGGGTGGGAAAGCAGTTACG----------------------------------------
----------------------------------------------------------------------CGTGTGCCAT
GTTTCTCTTTTCTTCTC----TGTGG--------TATTCTGGAGTTTGTTTGTACCAGATAAAAACTTTATACAGATAAC
AATTTAATTGTTATACACCAGTTTGATCATTATATG----------TATGACGTATGCAT--------------------
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---------------ATATCTAGCTATCTGTATCTATCGTTAGTACA------TACTTAGGTACTTGGGCCTTGGTTGCA
TTATTCCTATCCATCCAA-GGGGATTAAGCAAAGATGTCGTCGTTATAAGTTCTTTCC-TTGTAAACTTATATATTTTTA
GTAATGTGTAACAACTCACAACTGATGAACATGACTATCTCGGCATAGATTGAAGTTGGCTTCAATAACCTGGTCCTTCC
AGTCATCCTACATCACTCATAGGTTCGTCTGTCTTGCATGAGCAAGGGAATAGTTGAGGAAACACTGAAGATTTAATGGC
GACAAGATAGTCAGATATATCCTATGATTTTCAGGATGTTAAAATGCTTTATGCAAATGCTGCAGAATT----------T
CAGACAAGTTCTGTTCAGCATTAACTTAGTAAAATCATTTACCATACTTTGCAGCTGCTGCAACAGCAACGCCTGGTAGT
ATCGCACCAGCTATCTCATTGACAGAGAAGGCCTTGAAGCATCTGAACAGAATGAGGTCCGAAAAGAATGAAGATCTCTG
TTTGAGGATTGGAGTTAAACAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAGAGCCGAGGAAGCGCCAACC
CTGACGATTCAGTCATCGAGTATGAAGGTTTCACAATAGGTAACTGATTTGCCTTGACTGTGTATATACGTTTCAGAGGA
CATGGATTTGCATTTGTGCTCGAGATTAGAGTAACACTTTTGCGTTTCAAATAAATCCTT-GAAGGCTTG--AAATAGTC
CACAGGCTGTTGATCACAAGTACATGTGACAACCCATTCTGTTTATTCAGGCCAAACCTCCTGGTCTACGGTCTACCATA
ACTCTAACGAGACAGTATATTTTGTGTGCCTGCAGTCTGTGACCCAAAGAGCCTTCTCTTCATGTTTGGAATGGAGCTGG
ACTACAGCGACGCCCTCATCGGGGGCGGCTTCAACTTCCAGAACCCAAACGCGACAAAAACGTGTGGGTGCGGCAAGTCA
TTCGCAACCAGCAAGGAAATGCAGAGCACAGCAACTGCCTGCAACAACTAAACTAGAAATATAGTGCCAGGATGTGATAT
TACCATGCATCTTTGGTTGCT-CTGCATCCGGAAATGGCCGGATGGACAATACCACAGGTTCACAGATATACTCAGAATG
AATGGCTACAATTTGTAATACAGTTCAGTTCAGTGTGTATCAAGGTTCCAGTGGGACTTG---TAAGTTGTAACTGGTCG
GTAGTAGAATTTTAAAGATAGTCAC---GAAGATAGCTATACTTCTTTCTC-TTCTGATTACAAGGTA------------
------------------------------------------------------------------------ACGAGCGC
ACACTACGCTGCTCAGTTTGTGAAGTGCTTAT-TTTGTAATCTGATGTCGAAAATCAGCCGCAAAAGTAGTAAAAAAAGG
GGATCAAACAAACACCAAAATACACAAAAAGTCGGTTTGACAAATGGGATTATGATAATGCATTTGATATTCTCTAGTTG
CCTGAAAATGAGAGGCCTGTAAGTTGATTCTGGTAGGTG------------GAGATGGAGGCGGGGATGACATGGCCAGC
TGTGTCATCGTGC-----------------------------------------------------GTAAGGGCGACTCG
AGAAATGAGTCGG-------------------------------------------------------------------
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>chr7D_938
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---------------------------------------------------------TAAAAGTCCATCTCGAAAACAAT
ACATAATTGTGGACCGCAGACAGCCCGGAGCCCACAAGCCACCAAAGTCGGGGCGGCCCGCGAGCCACAGGATCTTTCCT
CGCTCCCTCCCTCTCTTTC----TCTCGGCCGCGTCGTCGTCGCTGCTTTCCCCCACCCTCTCTC----CCCAGCCCCAC
CCAATTTCCAATCATGGCGCTCGCATCCGGCACCACGGCCCCCCCGCTCCTCGGCCGCCTCCCGGGCACGGCGCGCCCCC
ACCTCGCCGTCTCCCCTTCGCCCTCCGCCCCTGTCTCCTCGGTCCGCTTCGCCGCCCGCGCCGGAGGCTCCCGCGCCGTC
TCCCTCCGCGCCTCCGCGCCTCCAGGTCCGTGGTCAAACCAGATGTTAGATGTTCTCCTCCACGCATATTTTTAAATTGA
AAATACGTTGGAGCGTTTTAGCTTGGAACGATTCGGATCGAATCCCCTTGCCAGACTTCTTCTG---TTG-------CGA
GAACCGGTAAAATGAAGCCGGATTGAT---GCGTAGCTGCCTGCCGTGAGAAA-----TATGCAGCGATGGCCATAGGG-
----GCTGATCTTGATGTAGCTGTAGCGCACATCGCTATCTTGATTCAGGCAGCCGGAAATTGT--TGATGGGAGATTGC
TGAGTGCGTAGTTGATGGCGTTGCCTTGCCTGTATTGCCTAAGTTAGTTGCCTTCT--------AGTAACTTGTGTGGCA
AA------------------GTGGTTGTCCCCACTAGGCTTATAATCAGAGCGACCCCATCCTAATTGTAGATCTTCCGT
CCACGACCCC---TATTAAACAATTTAGACAACATGGGTCGATCGGACACATGCTC---CTAGGAAATCCTACT----TC
TGGTTGCAGTATCAGCCTGTCAGGTGGGAAAGCAGTTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAAT
TTTGAACTAAAACCACGACGAGTAATTTGAACTAAAACCACGACGAGTAATTTGGAACGGAGGGAGTACGTGTGTGGCAT
GTTTCTGTTTTCTTCTC----TGTGG--------TATTCTGGAGTTTGTTTGTACCAGATAAAACT----TATAGATAAT
AATGTAATTATTATACATCAGTTTGATCATTATAAGCCATATCTGATATGCCGTATGCAT--------------------
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---------------ATATCTAGCTATCTGTATCTGTCGTTAGTAGATA--AGTAGTTCGGTACTTAGGCCTTGTTTGCA
CGATTCCTATCCATCCAA-GGGGATTAAGCAAAGATGTTGTCGTTATAAGTTTTTTCCCTTGTAAACTTGTATATTTTTA
GAAATGTG-------TCACAACTGGTGAACACGATTATCTCGGCATAGATTGAAGTTGGCTTCAATAACCCGGTCCTTCC
AGTCATCCTACATCACTCATA-GTTCATCTGTCTTGCATGAGCAAGGATTCAGTTGAGGAAACACCGAAGATTTGATGGC
TACTAGATAGTCAGATATATCCTACAATTTTCGGGATGTT-AAATGCTTTATGCAAATGCTGCAGAATT----------T
CAGACAGGTTTTGTTCAGCATCAACTTAGTAAAATCATTTACCATACTTTGCAGCAGCTGCGACCGCAACGCCTGGTAGC
ATTGCACCAGCTATCTCATTGACAGAGAAGGCCTTGAAGCATCTGAATAGAATGAGGTCCGAAAAGAATGAAGATCTCTG
TTTGAGGATTGGAGTTAAACAAGGTGGATGCTCTGGCATGTCTTACACCATGGAGTTTGAGAGCCGAGGAAGCGCCAACC
CCGACGATTCAGTCATCGAGTATGAGGGTTTCACAATAGGTAACTGCTTTGCCTTGACTGTATATA--CGTTTGAGAGGA
CATTGATTTGCATTTCTGCTCGAGATTAGAGTAACAGTTTTGCGGTTCAAATAAATCCTTGAAGGCTTGAAAAAATAGTC
CACAGGCTGTTGATCACAAGTACATGTGACAACCCATTCTGCCTAATCAGGCCAAACCACCTGGTCTACGGTCTACTGGA
ACTCTAATGAGACAGTATATTTTGTGTGCCTGCAGTCTGCGACCCAAAGAGCCTTCTCTTCATGTTTGGAATGGAGCTGG
ACTACAGCGACGCCCTCATTGGGGGCGGCTTCAACTTCCAGAACCCAAACGCGACGAAGACGTGCGGGTGCGGTAAGTCG
TTTGCGACCAGCAAGGAAATGCAGAGCACAGCAACTGCCTGCAACAACTGAACTAGAAATATAGTGCCAGGGTGTGATAT
TACCATGCATCTTTGGTTGCT-CTGCATCCGAAAATGGTCGGATGGACAATACCACAGGTTCACAGATATACTCAGAATG
AATGGCTACGATTTGTAATACAGTTCAGTTCAGTGTGTATCAAGGTTCCAGTGGGGCTTGTACTAAGTTGTAACTGCTC-
--AGTAGAATTTTAACGATAATCAC---GAAGATAGCTATACCTCTTTCTC-TGCTGATTATAAGCTAGAT---------
--------------------------------------------------------------------------GAGTGC
ACGCTACGCTGCTCAGTTTGTGAAGTGCTTAT-TTTGTAATCTGATGTTGAAAATCAGCCGCAAAAGTAGTAAAAAAAG-
GGATCAAACAAACACCAAAATACACAAAAGGTCGATTCAACAAATAGGATTATGATAATGCATTTGATATTCTCCAGTG-
-----------GAGGCCTGTAAGTTGATTTTGGTAGGTG------------GAGCCGGAGGCGGAAATGACATGGCCGGC
TGTGTCATCGT-----------------------------------------------------TGGTAAGGGCGACTCG
AGAAACGAGTCGGAGATGGGGATGCCGCTGCTGATCATGG----------------------------------------
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>chr6D_1140
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--------------------------------CCATGGCCCGCCCGCTCCTCGGCCGCCTCCCGGGCACGGCGCGCCCCC
ACCTCTCCGTCTCCCCCTCGCCCTCCGCCCCCGCCAACTCGGCCCGCTTCACCGCCCGCAGCGGCGGCTCCCGCGCCGTC
TCCCTCTGCGCCTCCGCGCCGCCAGGTCCGTGGTCAAACCAGATGTTGGATGTTCTCCTCCACGCATATTTTTAAAGTGA
AA-TACGTAGGATCGTTTTATCTTGGAAGGATTCGGATCGAATCCCCTTGCCAGACTTCTTCTG---TTG-------TGA
GAACCGATAAGATGAAGCCGGATCGAT---GTGTAGCTGCATACCATGTGAAA-----TATGCAGCGATGGCCATAGGG-
----GCTGATCTTGATGTAGCGGTGGCGCGCCTCGTTATGTTGATTCAGTCAGCTGAAAATTGT--CGATTGGAGATTGG
TGAGTGCGTAATTGATGGCGTTGCCTGGCCTGTATTGCCTAGGTTAGTTGCCTGCT--------GGTAGCTTGTGTGCCA
AA------------------GTGGTTGTCCCCACTAGGCTTATAATCAGTGCGACCCCATCCTAATTTCAGATCTTCCAT
CCACGACCCC---TATTAAACAATTTAGACAACATGGGTAGATCGGACACATGCTCCCACTAGGCAATCCTACT----TC
TGGTTGAAGTATCAGCCTATCAGGTGGGAAAGCAGTTATGT---------------------------------------
------------------------------------------------------------------TACACGTGTGGCAT
GTTTCTGTTCTCTTCTC----TGTGGCATTGTGGCATTCTGGAGTTTGTTTGTACCAGATAAAAACTT-AAATAGATAAT
AATGTAATTGTTATACATTAGTTTGATCATTATATGATGTATTTGGTATGCGGTATGCAT--------------------
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---------------ATATCTTGCTATATGTATCTATCGTTAGTAGATACTAGTAGTTAGGTACTTAGGCCTTGGTAGCA
TTATTCCTATCCATCCAA-GGGGATTAAGCAAAGATGTTGTCATTATAAGTTCTTTCC-TTGTAAACTTAT---------
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>chr2B_1140
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--------------------------------CCACGGCCCGCCCGCTCCTCGACCGCCTCCCTGGCACGGCGCGCCCCC
ACCTCTCCGTCTCCCCCTTGCCCTTCGCCCCCGCCAACTCGGTCCGCTTCGCCGCCCGCAGCGGTGGCTCCCGCGCCGTC
TCCCTCTGCGCCTCCGTGCCGCCAGGTCCGTGGTCAAACCAGATGTTGGATGTTCTCCTCCACGCATATTTTTAAAGTGA
AA-TATGTAGGATCGTTTTATCTTGGAAGGATTCAGATTGAATCCCCTTGCCAGACTTCTTCTG---TTG-------TGA
GAACCGATAAACTGAAGCCAGATCGAT---GCATAGATGCATACCATGTGAAA-----TATGTAGCGATGGCCATAGGG-
----GCTGATCTTGATGTACCAGTGGCGTGCCTCATTATGTTGATTCAGTCAGCTGAAAATTGT--CGATTGGAGATTGG
TGAGTGCGTAATTGATGGCGTTGCCTGGCCTGTATTGCCTAAGTTAGTTGCCTGCT--------AGTAGCTTGTGTGCCA
AA------------------GTGGTTGTCCCCACTAGGCTTATAATCAGCGCGACCCCATCCTAATTGCAGATCTTCCAT
CCACGACCCC---TATTAAACAATTTAGACAACATGGGTAGATCGGACACATGCTCCCACTAGGCAATCCTACT----TC
TGGTTGCAGTATCAGCCTATCAGGTGGGAAAGCAGTTATGT---------------------------------------
------------------------------------------------------------------TACGCGTGTGGCAT
GTTTCTGTTCTCTTCTC----TGT--------GGCATTCTGGAGTTTGTTTGTACCAGATAAAAACTT-AAATAGATAAT
AATGTAATTGTTATACATTAGTTTGATCATTATATGATGTATCTGGTATGCGGTATGCAT--------------------
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---------------ATATCTTGCTATCTGTATCTATCGTTAGTAGATACTAGTAGTTAGGTACTTAGGCATTGGTTGTA
TAATTCCTATCCATCC-A-GGGGATTAAGCAAAGATGTTGTCATTATAAGTTCTTTCC-TTGTAAACTTAT---------
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>chr4A_1612
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------------------------------TGTATTGCCTAAATTAGTTGTTT-TTGTCTGCTCAGTTCTGTGCGTTGCA
TATTTGTTCATAGAGGC-TGGTTGTTGTCCTTGCTAGA-TTATAATCAGAGCTACTCCATCTTAATAGTTGACATTCCAG
CCCTGACACT---TACTAGACAATTAAAC-----TCGGTAGAGCGGACAAATGCTCCTAGACAAATCTACTTCTGGACTC
TGGTTGCAG--------TATCAGGTGGGAAAGCAGTTTGTCA--------------------------------------
-----------------------------------------------------------------------GTGTGACCC
ATTCTTGTTTTCTTTGTGGTTTGT--------GCTATTCTGGAGTTGGTTTGTACCAGGTAATTTTTT-ATATAGATAAT
AATGCAATTATGATGGATTTGTTTGAGCATTATATGCTGTATGTG-------GTATGCAT--------------------
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---------------ATATCTAGCTATCTGTATCTATCATTAGTAGATAGTC------AGGGACTTAGGCCTTGGTTGCA
TTACTCCTATCCATCC-ATGGGTATTAAGTGTAGATGG-GTCGTTATAAGTTATTTCC-TTGTAAACTAATATATTTTTA
GAAATGTG-------TCACAACTGATGAACAAGACTAT------------------------------------------
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>chr6B_1757
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---------------TTAAACAATTTAGACAACATGGGTAGATCGGACACATGCTCCTACTAGGCAATCCTACT----TC
TGGTTGCAGTATCAGCCTATCAGGTGGGAAAGCAATTATGT---------------------------------------
------------------------------------------------------------------TACGCGTGTGGCAT
GTTTCTGTTCTCTTCTC----TGT--------GGCATTCTGGAGTTTGTTTGTACCAGATAAAAACTT-AAATAGATAAT
AATGTAATTGTTATACATTAGTTTGATCATTATATGTTGTATCTGGTATGCGGTATGCATATATCTATTGGGGAACATAG
TAATTTCAAAAAAAATTCTACGTACACGCAAGATCATGGTGATGCATAGCAATGAGAGGGGAGAGTATCGTTTACGTACC
CTCATAGACCGTCAGCGGAAGCGTTATATCAACGCGGTTGATGTAGTCAAAAGTCTTCACGATCCGACCGATCCAATTAC
CGAAAGCACGGCACCTCCGCATTCGGCACACGTTCAGCTCGATGACGTCCTTGCCTTCTCGATCCAGCAAGAGGGGTGAA
GTAGTAGATGAGTTCCGGTAGCACAATGGCGTGGTGATGGTGTTGGTGAAGAACAATCTCCGCAGATCTTCGCCTAAGCA
CTACGAAAACTATGACGGAGGATAAACTAGAGGGGACGGGGTTGCCAGCACACGGCTTGGTGTTTCTTGATCTGTCTTGG
GTGCTAGCCCTACCCCTTTATTTATATGTTGAGCCTTGGGATCGAAACTTGGAGTAAAAGCCTCCACAAAGTCAGTTTCA
CCCGAAAGGCAAGAGTCCTTCTCGGACTCCAGGGCCAGACGCCAGGGTTCCCGGCGTTTGGACCCAAACGGCAGGGACCC
TGGCGTCTGGCCCCTGGACTCCGCAAAACTTCCTTTTGTGCTTTCCAAAAACCTTGTGGGTTTTCCCCTTTGGCCGAGAT
AAAGTGTTTTCGTGCCCAAACATTTCGGGAAACATCCGGAACCCCTTCCGATGGATTCCGGAACCCTTCCGGAGATCAAA
CACTACTATCCACATATCAATCTTTACTTCCGGACCATTCCGGAGTACCTCGTCATATCCGTGATCTCATCCGAAACTCC
GAACAACATTCGGTCACCAACAAACATAACTCATAGTACTATATCGTCAACGAACGTTAAGCGTACGGACCCTACGGGTT
CGAGAACTATGTAGACATGACCGAGACACCTCTCTGGTTAATAACCAATAGCGGAACCTGGATGCCCATATTGGCTCCTA
CATATTCTACGAAGATCTTTATCGGTCAGACCGCATAACAACATATGTTGTTCCCTTTGTCATCGGTATGTTACTTGCCC
GAGATTCGATCGTCGGTATCTCAATACCTAGTTTAATCTCGTTACCGGCAAGTCTCTTTACTCGTTCCGTAATACATCAT
CCCACAACTAACTCATTAGTCACAATGCTTGCAAGGCTTATAGTGATGTGCATTACCGAGAGGGCCCACAGATACCTCTT
CGACAATCGGAGTGACAAATCCTAATATCGAAATATGCCAACCCAACAAGTACCTTCGGTGACACCTGTAGAGCACCTTT
ATCATCACCCAGTTACGTTGTGACGTTTGGTAGCACACAAAGTGTTCCTCCGGTAAACGAGAGTTGCATAATCTCATAGT
CATAGGAACATGTATAAGTCATGAAGAAAGCAATAGCAACATACTAAACGATCAAGTGCTAAGCTAACGGAATGGGTCAG
GTCAATCACATCATTCTCCTAATGATGTGATCCCGTTAATCAAATGATAACTCATGTCTATGGCTAGGAAACATAACCAT
ATTTGACTAACGAGCTAGTCAAGTAGAGGCATACTAGTGACACTCTGTTTGTCTATGTATTCACACATGTATTATGTTTC
CGATTAGTACAATTCTAGCATGACTAATAAACATTTATCATGAAATAAGGAAATAAATAATAACTTTATTATTGCCTCTA
GGGCATATTCCTTCAATATCTTGCTATCTGTATCTATCGTTAGTACATACTAGTAGTTAGGTACTTAGGCCTTGGTTGCA
TTATTCCTATCCATCC-AGGGGGATTAAGCAAAGATGTTGTCATTATAAGTTCTTTCC-TTGTAAACTTAT---------
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>chr6B_1757
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---------------TTAAACAATTTAGACAACATGGGTAGATCGGACACATGCTCCTACTAGGCAATCCTACT----TC
TGGTTGCAGTATCAGCCTATCAGGTGGGAAAGCAATTATGT---------------------------------------
------------------------------------------------------------------TACGCGTGTGGCAT
GTTTCTGTTCTCTTCTC----TGT--------GGCATTCTGGAGTTTGTTTGTACCAGATAAAAACTT-AAATAGATAAT
AATGTAATTGTTATACATTAGTTTGATCATTATATGTTGTATCTGGTATGCGGTATGCATATATCTATTGGGGAACATAG
TAATTTCAAAAAAAATTCTACGTACACGCAAGATCATGGTGATGCATAGCAATGAGAGGGGAGAGTATCGTTTACGTACC
CTCATAGACCGTCAGCGGAAGCGTTATATCAACGCGGTTGATGTAGTCAAAAGTCTTCACGATCCGACCGATCCAATTAC
CGAAAGCACGGCACCTCCGCATTCGGCACACGTTCAGCTCGATGACGTCCTTGCCTTCTCGATCCAGCAAGAGGGGCGAA
GTAGTAGATGAGTTCCGGTAGCACAATGGCGTGGTGATGGTGTTGGTGAAGAACAATCTCCGCAGATCTTCGCCTAAGCA
CTACGAAAACTATGACGGAGGATAAACTAGAGGGGACGGGGTTGCCAGCACACGGCTTGGTGTTTCTTGATCTGTCTTGG
GTGCTAGCCCTACCCCTTTATTTATATGTTGAGCCTTGGGATCGAAACTTGGAGTAAAAGCCTCCACAAAGTCAGTTTCA
CCCGAAAGGCAAGAGTCCTTCTCGGACTCCAGGGCCAGACGCCAGGGTTCCCGGCGTCTGGACCCAGACGGCAGGGACCC
TGGCGTCTGGCCCCTGGACTCCGCAAAACTTCCTTTTGTGCTTTCCAAAAACCTTGTGGGTTTTCCCCTTTGGCCGAGAT
AAAGTGTTTTCGTGCCCAAACATTTTGGGAAACATCCGGAACCCCTTCCGATGGATTCCGGAACCCTTCCGGAGATCAAA
CACTACTATCCACATATCAATCTTTACTTCCGGACCATTCCGGAGTACCTCGTCATATCCGTGATCTCATCCGAAACTCC
GAACAACATTCGGTCACCAACAAACATAACTCATAGTACTATATCGTCAACGAACGTTAAGCGTACGGACCCTACGTGTT
CGAGAACTATGTAGACATGACCGAGACACCTCTCTGGTTAATAACCAATAGCGGAACCTGGATGCCCATATTGGCTCCTA
CATATTCTACGAAGATCTTTATCGGTCAGACCGCATAACAACATATGTTGTTCCCTTTGTCATCGGTATGTTACTTGCCC
GAGATTCGATCGTCGGTATCTCAATACCTAGTTTAATCTCGTTACCAGCAAGTCTCTTTACTCGTTCCGTAATACATCAT
CCCACAACTAACTCATTAGTCACAATGCTTGCAAGGCTTATAGTGATGTGCATTACCGAGAGGGCCCACAGATACCTCTT
CGACAATCGGAGTGACAAATCCTAATATCGAAATATGCCAACCCAACAAGTACCTTCGGTGACACCTGTAGAGCACCTTT
ATCATCACCCAGTTACGTTGTGACATTTGGTAGCACACAAAGTGTTCCTCCGGTAAACGAGAGTTGCATAATCTCATAGT
CATAGGAACATGTATAAGTCATGAAGAAAGCAATAGCAACATACTAAACGATCAAGTGCTAAGCTAACGGAATGGGTCAG
GTCAATCACATCATTCTCCTAATGATGTGATCCCGTTAATCAAATGATAACTCATGTCTATGGCTAGGAAACATAACCAT
ATTTGACTAACGAGCTAGTCAAGTAGAGGCATACTAGTGACACTCTGTTTGTCTATGTATTCACACATGTATTATGTTTC
CGATTAGTACAATTCTAGCATGACTAATAAACATTTATCATGAAATAAAGAAATAAATAATAACTTTATTATTGCCTCTA
GGGCATATTCCTTCAATATCTTGCTATCTGTATCTATCGTTAGTACATACTAGTAGTTAGGTACTTAGGCCTTGGTTGCA
TTATTCCTATCCATCC-AGGGGGATTAAGCAAAGATGTTGTCATTATAAGTTCTTTCC-TTGTAAACTTAT---------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S---
--------------------------S----------------S--S--------------S------------------
----------------------------------S--------S---------------------SSSS-----------
---------------------------------------------------------------S----------------
----------------------------S-----S-----S-----S---------------------------------
--------------------------------------------------S----------S------------------
---------------------SS---------------------------------S----S--SSS--------S----
--S------------------------SSS-----------------------SSSSS----------------------
---------S----------------S-------------------------------------SS---------S----
---SS-----------------------------------S---S-------S----S----------------------
-------S---SS-SSSS-----------------------S--------------------------------------
----SS----SSS---------S------S----------S---S--S-------------S----------S-------
----------S---------------------------------------------------------------------
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---------------------------------------------------------------------------S----
-S--------------------------S-----------------S---------------------------------
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-----------------S--------------------SSS---------------------------------------
----S-------------------------------------S-------------------------------------
--------------------------------------S-S---------------------------------------
--------------------S-----------------------------------------------------------
-------------------------------------S---S-------S-------------------SSSSSSSSSS-
-------------------------S----------S-------------------------------------------
-----------S---------------------S-----------------------S----------------------
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-------------------------------------------------------------------S------------
-------------------------------------------S--S---------------------------------
----------------------------------------------------------SS-SS-----------------
--------------S-----------S-----------------------------------------------------
-------------S------------------------------------------------------------------
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--S------------------S----------------------------------------------------------
--------------------------------------------S-----S-----------------------------
-------------S--SSSS-SSSSSSS--------S--------------S----------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------SS---------S-----------S-----------------------------------------------
---------S----------------------------------------------------------------------
---------------------------------------SSSSSSSSSSSS-------S----------------S---S
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--
-----------------------SS-S-S------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_212
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--------------------------------GATGACACTTGGGATCGCCA----------------------------
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>reverse_1427
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------------------------------------------------------------------CTTGTGATTTGCGA
GAGCCG--------------------------------------------------------------------------
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>forward_536
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------------------------------------TGGAGGCAGCACTTGTGAAT------------------------
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>reverse_1436
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---------------------------------------------------------------------------TGCGA
GAGCCGGTAAAATGA-----------------------------------------------------------------
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>forward_557
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---------------------------------------------------------CAGTTTCGGGAGATGGCGAT---
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>reverse_1494
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-----------------------------------------------------TACAGTATGCAGCGATGGCC-------
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>forward_676
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----------------ACAAGAGCTCCGAGTCTCCA--------------------------------------------
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>reverse_1658
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---------------------------------------------------------CCTGCTCAGTACCGTGTGTG---
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>forward_1547
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-------GACCTTGATGTAGCGGTGGT-----------------------------------------------------
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>reverse_5256
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-------------------------------------------------------TGGGACAGAGGGAGTAGACG-----
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