>input_sequence_35484
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------------------------------------------------------------------------ATGGAGAT
ACAGACTTCAGGGAAGCCCATTGATATGCTGATGGAGAAGGTTCTCTGTATGAATATTCTTTCTTCTGATTACTTCAAGG
AGCTCTACAGGATGAAGACCTATCATGAGGTCATTGACGAGATCTACAACCAAGTTGATCATGTGGAGCCTTGGATGACT
GGCAATTGTAGGGGTCCTTCCACTGCATTTTGTCTCCTCTACAAGTTCTTCACAATGAAGCTTACTGTGAAACAGATGCA
TGGTTTGTTGAAGCATCCTGACTCGCCATACATTAGAGCTGTAAGTTTCTTTGACATAAGTTACTTTTGACAAATACACG
CATCATGGCTGTTGTGTCTACTCGTTACATTTGTTTGTGATTAATGCATGCACTAGGTTGTATGTCAAAGTTGTACGAAA
ACAAAGTGTTAGTATGTTTGCAGTGACAAACTGGTGTTATCAACCTATCCT--------AAGCAATCAACACTTCCATTT
TTTTTATGTTCACTTATTACATTTTGGTTATAACCACTAACAGTCATATGACTTGCTTTCTTGCATGGCCTTGTGTCTTG
ATTTTGGTCCTAGGACACGTGGATGAACAAAGTTTGCAAGCAGTAGTGTACCAGTCTGTGCATTGGATTTGTGAGCATTT
TTTGTTTGTCTTCATTTATCATGTTAGATAATCAGCTGGCTTCTACTAAATAACCAATTGGTGTTTGTTTTTTGCAGATA
GGATTTTTGTATCTTCGATATGTTGCAGATCCAAAGATCCTATGGACATGGTATGAGCCCTACTTGAAGGATGATGAGGT
ATTGCTGTTTTTGAGTTTTCATTTGTATATTTCTTGTACTTTTATGTTTTTTGCTGTTATATGTACTTTCATAAGTCCAT
AAGACCATAACCATATTGAGCTTCCAT---------------------------------TAGAGGAGCTATATGGCCTG
CAACTAGCTTGTTCAAGAAAGATGTGCTAATTGCAGAAGTCATGGTGTACAAACCAAGGAATAGAAGTTTATAATTAATA
AGGAAATATATCAAGTCCATTTGATTTCATCA-TATTAACTAATTAGCTAGTTAGCCATATAATTATTATTTTTGGCTTG
ATGCAGGAATTCTCCCCCGGATCTAATGGTCGCATGACAACCATGGGTGTATATGTGCGTGATCTTATACTTGGACAGGT
CTGCATCTCAAGTTCTTGCTTTCAGAATAAAAATAATTGCACTTGTTTGACA-----TTTTTTTCCTGTTTCTGTCGTTA
TAACTGAAGAATGTTTGTTCCTTTCTCTATTGTCTCACCTTCCTGTAGCCAATCCTTTTAATTCTCATGTGAACTAGATT
ACTATACTACATGAGTTTATTTCTCCATGCTACTTCTCACCTTCTATTTTCTGATGCTGTTAACAGTTTTTAATCTTGTG
TTTATTGTATATATGTTCAGAAACTATGCCAACTAGCTGGACAAATTTCTTAGGCAGGCAAGTCATGGTTCAACAACATA
GCTTGTTCATAGTATATGCTCTTCTCTTTTCCAAGAAGCTGTGTCAAATTCATAGATAGTTGGTTAAAGGTTTATTTGTG
ATTCTCAATGGCCATATCACAAGATTGGATTGAATTGTGTCACCTAATTTGACTTTATGTTAGCAAGTTTATATTGACCA
GCATGTTGCTCTGTTTTCCTTG-GCAGTACTACTTTGATAGTATCCTTCCAAGAGTTCCTGTTCCAGTAGTTCGTCAAGT
AACAACCAATCTTGAGAAGATGAAGCTGCCTACCAAGCTTTCTGGGGTGACTGGAGACAGTCGCCACGGATCAGAGGACA
CTGCCCGTCGCCCCCCTTCTGTTAAAGCTTCTCTGTCGGTTTCTTTTGGACAGCGTGCGCCACACCGTGCTTCCACACGG
GATTCTTCCCCAGTGCGGCGAACAGTCACCCAAGATGATCATCGGAGATCATCTTCACCATTTCGTCGCAGTGTAAGTCG
GGAGGGGCCTT---------------------------------ACAATGACCGTTCAAGTCACGACCGAGAAGGTAACC
GTTCAAGCCGTGACCGAGATACTGACCGTTCAAGCCGTGACCGAGATACTGGCCGTTCAAGCCATGACCGAGATACTGGC
CATTCAAGCCGTCACCGAGAGCGTGATCGTTCAAGCCATGACAGAGAGCGTGATTATGACCGTGACAGCAGGGATTGTGA
CTATTACAGGTCCAGGCATTCAGAAGAAAGAAGGGATTACGGAAGCGAGCGTGACAATAGTAGACA--GACGCTCCAGCT
CATGTCATAG----------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G138200
GATTCCGAGTCGTACGCGACTCTCCCACACCTCCACAAATCCACAGCCTCCCCTCCCCTCCCCTCCC--TCACCCATCTC
CAGCTACCTCCCAGCTACCGACGAATCCCAACCATCTCACCCGCCGCCGCCGCCGCCGT---CGAAGCCGATACGAGTTC
ATCCTCTACCTAGCGTCGTCATCCCGTCTGCTTTGGGG-TCTCCGCGAGCCGCCCGCGCTC---GAAGCCGAGGAGGTCC
TAGGGTTCGCCATCCTGCGTGTGAGTATCTCT-TCTGTCTCTGCGTACATAGATTCATCTCGCCAGTTATTAGTTAAGTA
GAGGC-AATTACTAGTTTGAGACCTTTTTTGCTATTATATTAGGTGCGGAATAGATGAGAATGTACTCTGGCGAAATCGT
GTACGTTAACGATAGGGTTTCCGATGAATCT-TGTGATTAAAGGCGACGGAAAATTCTTTGTGTAAAA-TAGTTCTAGTC
TAGTTCTACTTGGCCCCATAGAAATACAAGTGTATGGTGGGTTGCATTTATCCGCATCAGCGATTTGGAGGGATTAAGTT
ATTGGGGTTATTGGGGGGGAATCCTTAGGCTAGATAGTGGAAAAGGCTCAGTGCAGGTTGTCTGGACATCACAGTTGGGA
CTCTCTTAATTGAGT-----ACATGGTAAAACTATCAGCCACTCTCGGGGTTTGCTTGCGTGCCATTACTTGTCACTTGT
CAGACGCACTGATGGTAACATAGTAGAATTTGCC--------GAGCTTAATTGGGCATTTCATGGGTAGTAAGGGACACA
TGAATTTTCAGCCATTTGAGGTAAAGACTGATCTACATTTTTCTCAGGTGGCAATACATCTGTAAATATTTGCGTAATAT
TTCTATCAGAACTAAATCCAGTTTTCTTCGTATTTTGGGAAAAGGTTCATTATATTATACTTTTC---TACTTGTGTGTG
ACATAAGCTTTGAGGCTTTAAGCTG---AGAGGATCCCTCTGTTTTTGGTCCAGGTTTGTGTTCGCTGAAATATGGAGAT
ACAGACTTCAGGGAAGCCCATTGATATGCTGATGGAGAAGGTTCTCTGTATGAATATTCTTTCTTCTGATTACTTCAAGG
AGCTCTACAGGATGAAGACCTATCATGAGGTCATTGACGAGATCTACAACCAAGTTGATCATGTGGAGCCTTGGATGACT
GGCAATTGTAGGGGTCCTTCCACTGCATTTTGTCTCCTCTACAAGTTCTTCACAATGAAGCTTACTGTGAAACAGATGCA
TGGTTTGTTGAAGCATCCTGACTCGCCATACATTAGAGCTGTAAGTTTCTTTGACATAAGTTACTTTTGACAAATACACG
CATCATGGCTGTTGTGTCTACTCGTTACATTTGTTTGTGATTAATGCATGCACTAGGTTGTATGTCAAAGTTGTACGAAA
ACAAAGTGTTAGTATGTTTGCAGTGACAAACTGGTGTTATCAACCTATCCT--------AAGCAATCAACACTTCCATTT
TTTTTATGTTCACTTATTACATTTTGGTTATAACCACTAACAGTCATATGACTTGCTTTCTTGCATGGCCTTGTGTCTTG
ATTTTGGTCCTAGGACACGTGGATGAACAAAGTTTGCAAGCAGTAGTGTACCAGTCTGTGCATTGGATTTGTGAGCATTT
TTTGTTTGTCTTCATTTATCATGTTAGATAATCAGCTGGCTTCTACTAAATAACCAATTGGTGTTTGTTTTTTGCAGATA
GGATTTTTGTATCTTCGATATGTTGCAGATCCAAAGATCCTATGGACATGGTATGAGCCCTACTTGAAGGATGATGAGGT
ATTGCTGTTTTTGAGTTTTCATTTGTATATTTCTTGTACTTTTATGTTTTTTGCTGTTATATGTACTTTCATAAGTCCAT
AAGACCATAACCATATTGAGCTTCCAT---------------------------------TAGAGGAGCTATATGGCCTG
CAACTAGCTTGTTCAAGAAAGATGTGCTAATTGCAGAAGTCATGGTGTACAAACCAAGGAATAGAAGTTTATAATTAATA
AGGAAATATATCAAGTCCATTTGATTTCATCA-TATTAACTAATTAGCTAGTTAGCCATATAATTATTATTTTTGGCTTG
ATGCAGGAATTCTCCCCCGGATCTAATGGTCGCATGACAACCATGGGTGTATATGTGCGTGATCTTATACTTGGACAGGT
CTGCATCTCAAGTTCTTGCTTTCAGAATAAAAATAATTGCACTTGTTTGACA-----TTTTTTTCCTGTTTCTGTCGTTA
TAACTGAAGAATGTTTGTTCCTTTCTCTATTGTCTCACCTTCCTGTAGCCAATCCTTTTAATTCTCATGTGAACTAGATT
ACTATACTACATGAGTTTATTTCTCCATGCTACTTCTCACCTTCTATTTTCTGATGCTGTTAACAGTTTTTAATCTTGTG
TTTATTGTATATATGTTCAGAAACTATGCCAACTAGCTGGACAAATTTCTTAGGCAGGCAAGTCATGGTTCAACAACATA
GCTTGTTCATAGTATATGCTCTTCTCTTTTCCAAGAAGCTGTGTCAAATTCATAGATAGTTGGTTAAAGGTTTATTTGTG
ATTCTCAATGGCCATATCACAAGATTGGATTGAATTGTGTCACCTAATTTGACTTTATGTTAGCAAGTTTATATTGACCA
GCATGTTGCTCTGTTTTCCTTG-GCAGTACTACTTTGATAGTATCCTTCCAAGAGTTCCTGTTCCAGTAGTTCGTCAAGT
AACAACCAATCTTGAGAAGATGAAGCTGCCTACCAAGCTTTCTGGGGTGACTGGAGACAGTCGCCACGGATCAGAGGACA
CTGCCCGTCGCCCCCCTTCTGTTAAAGCTTCTCTGTCGGTTTCTTTTGGACAGCGTGCGCCACACCGTGCTTCCACACGG
GATTCTTCCCCAGTGCGGCGAACAGTCACCCAAGATGATCATCGGAGATCATCTTCACCATTTCGTCGCAGTGTAAGTCG
GGAGGGGCCTT---------------------------------ACAATGACCGTTCAAGTCACGACCGAGAAGGTAACC
GTTCAAGCCGTGACCGAGATACTGACCGTTCAAGCCGTGACCGAGATACTGGCCGTTCAAGCCATGACCGAGATACTGGC
CATTCAAGCCGTCACCGAGAGCGTGATCGTTCAAGCCATGACAGAGAGCGTGATTATGACCGTGACAGCAGGGATTGTGA
CTATTACAGGTCCAGGCATTCAGAAGAAAGAAGGGATTACGGAAGCGAGCGTGACAATAGTAGACA--GACGCTCCAGCT
CATGTCATAGGAGCAGAAGCCGGAGTCGTAGCAGGAGCAGGAGCCGGAGTCGGAGCAAGAATGAGCATCGATCTAGTCCT
TTTGGGGATACAAGCAAAGAGAAGGCTGCTGCTGCCTCGAGCAACCTAGCTAAGCTGAAAGACCTGTACGGCGACGTAAC
TGAGAAGAAGGATGACAGTGATGCCAGGTGGCTTCACCATGATTCATGTGCCGAGGAGGTTATCAGGTTGGGAGGCCCTA
GGTGGAGATAAATTTGAACCGCCGACTCTGTCATCAAGGTCATGTTACTCCACCGTTTGATCTACCGGCTTCTGCATTGG
CATTAGTGAGAGTTTAGTCTTTGTAAACACTTGTACTTTATGTTGGTTCATCAATCCATGTCTTTCGGACGTGCAGTCAG
TCTACCAAATTCATCAACACAACGTTATCATGTTAGGCTGAATGTTTGACGTGTACCAACTGGGTTACATGATGTCTGGC
ACTAGAGCAAAAATGAAGAATGCAATGATACATCTCTTTCATTTGAAGAAAGAATCATACATCTCT---GCGTAAGATTG
AAATCTTT-TCATGTCATTTGAAAGCCATGTGCTAATGAGTTGCATTCAACTGCCTTGAAAATGTATCTCAGAGTGGTTT
TGCTAAATCTCAGGTGCCTGAGATTTTAGTTTGTGTTAGTAAGTTTCTGCATTGCTCGGGGCTGGTGGTGGGACAACGTG
AGGAGCGGCACGCCGAGGCTGAGCCAAAGACGATTGCGGCATCCACC---------------------------------
----------GAGGCGAGGAAGAAACTTTAGGGCATCTACGATGATGG-----------TACGGTCCGGACATGTGCCAA
CGAACGGGGATAGTACGGTCCGGACATGTGCTAACGAATGCGGGCATGTATCGGTCCACTTGGCGGTCCGAACGCACACT
TTCCCGCAAACTGAAGACAAGATAGCAGTTACGGTCCGCGTCTGACTAACCCGGTCTACAAAAAAAAACTCCTTTGCCCC
CGCACCTTCCCGCCGGAACAGTCGGCGT
>chr1A_1
GATTCCGAGTCGTACGCGACTCTCC--CACCTCCACAAATCCACAGCCTCCCCTCCCCTCCCCTCCCCCTCATCCATCTC
CGGCGACCTCCAAGCTACCGACGAATCCCAACCATCTCGCCCGCCGCCG---------AAGCCGAAGCCGATACGAGTTC
ATCCTCTACCGAGCGTCGTCATCCCGTCTGCTTTGGGG-TCTCCGCGAGCCGCCCGCGGTCTTGGAAGCCGAGGAGGTCC
TAGGGTTGGCCATCCTGCGTGTGAGTATCTCTCTCTGTCTCTGCGTACATAGATTCATCTCGCCAGTTATTAGTTAAGTA
GAGGC-GATTACTAGTTTGAGACCTTTTTTTGCTATTAAA---GTGCGGAATAGACGAGAATGTCCTCTGACGAAATCGT
GTACGTTAACGATAGGGTTTCCGATGAATCTGTGTGATTAATGGCCATGGAAAATTCTTTGTGT-AAA-TAGTTCTAGTC
TAGTTCTACTTGGCCCCATAGAAATACAAGTGTATGGTGGGTTGCATTTATTCGCATCAGCGATTTGGAGGGATTAAGTT
ATTGGGGAAAG----------TCCTTAGGCTAGATAGTGGAAAAGGCTCACTGCAGGTTGTCTGGACATCACAGTGGGGA
CTCTCTTAATTGAGTTATATACATGGTAAAACTATCAGCCGCTCTCGAGGTTTGCTTCCGTGCCATTACTTGTTG-----
--GACACACTTATAGTAACATGGTAGAATTTGTCGACCTTGAGAGCTTAATTGGGCATTTCATGGTTAGTAAGGGACACA
TGAATTTTCAGCCATTTGAGGTAAAGACTGATCTACATTTGTCTCAGGTGGCAATATATCTGCAAATATTCG--------
----------------------------CGTATTTTGGGAAAAGGTTCATTATATTATACTTTTCAACTACCTGCATGTG
ACATAAGCTTTGAGGCTTTAAGCTAATAAGAGGATCCCTCTGTTTTTGGTCCAGGTTTGTGTTCGCTGAAATATGGAGAT
ACAGACTTCAGGGAAGCCCATTGATATGCTGATGGAGAAGGTTCTCTGTATGAATATTCTTTCTTCTGATTACTTCAAGG
AGCTCTACAGGATGAAGACCTATCATGAGGTCATTGACGAGATCTACAACCAAGTTGATCATGTGGAGCCTTGGATGACT
GGCAATTGCAGGGGTCCTTCCACTGCATTTTGTCTCCTCTACAAGTTCTTCACCATGAAGCTTACTGTGAAACAGATGCA
TGGTTTGTTGAAGCATCCTGACTCCCCATACATTAGAGCTGTAAGTTTCTTTGACATAAGTCACTTTTGACAAATACACG
CATCATGGTTGTTGTGTCTACTCGTTATATTTGTTTGCGATTAATGCATGCACTAGGTTGTATGTCAAAGTTGTACGAAA
ACAAAGTGTTAGTATGTTTGCAGTGACAAACTGGTGTTATCAACTTATCCT--------AACT--------CTTCCATTT
TTTTTACGTTCACTTATTACATTTTGGTTATAACCACTAACAGTCATATGACTTGCTTTCTTGGATGGCCTTGTGTCTTG
ATTTTGGTCCTAGGACACGTGGATGAACAAAGTTTGCAAGCAGTAGTGTACCAGTCTGTGCATTGGATTTGTGAGCATTT
TTTGTTTGTCTTCATTTATCGTGTTAGATAATCAGCTGGCTTCTACTAAATAACCAATTGGTGTTTG-TTTTTGCAGATA
GGATTTTTGTATCTTCGATATGTTGCTGATCCAAAGATCCTATGGACATGGTATGAGCCCTACTTGAAGGATGATGAGGT
ATTGCTGTTTTTGAGTTTTCATTTGTATATTTCTTGTACTTTTATGTTTTTTGCTGTTATATGTACTTTCATAAGTCCAT
AAGACCATAACCATATTGAGCTTCCATTTAATTTCCAAATAATAAGTGGATACGGTCCATTAGAGGAGCTATATGGCCTG
CAACTAGCTTGTTCAAGAAAGATGTGCTAATTGCAGAAGTCATGCTATACAAACCAAGGAATACAAGTTTATAATTAATA
AGGAAATATATCGAGTCCATTTGATTTCATCATTATTAACTAATTAGCTAGTTAGCCATATAATTATAATTTTTGGCTTG
ATGCAGGAATTCTCCCCTGGATCTAATGGTCGCATGACAACCATGGGTGTATATGTGCGTGATCTTATACTTGGACAGGT
CTGCATCTCAAGTTCTTGCTTTCAGAATAAAAATAAGTGCACTTGTTTGTTTGACATTTTTTTTCCTGTTTATGTCGTTA
TAACTGAAGAATGTTTGTTCCTTTCTCTATTGGCTCACCTTCCTGTAGCTAATTCTTTTAATTCTCATGTGAACTAGATT
ACTATACTACATGAGTTTATTTCTCCATGCTACTTCTCACCTTCTATTTTCTGATGCTGTTAACAGTTTTTAATCTTGTG
TTTATTGTATATATGTTCAGAAACTATGCCAACTAGCTGGACAAATTTTTTAGTCAGGCAAGTCATGGTTCAACAACATA
GCTTGCTCATAGTATATGCTCTTCTCTTTTCCAAGAAGCTGTGTCAAATTCATAGATAGTTGGTTAAAGGTTTATTTGTG
ATTCTCAATGGCCATAGCACAACATTGGATTGAATTGTGTCGCCTAATTTGACTTTATGTTTGCAAGTTTATATTGACAA
GCATGTTGCTCTGTTTTCCTTGTGCAGTACTACTTTGATAGTATCCTTCCAAGAGTTCCTGTTCCAGTAGTTCGTCAAGT
AACAACCAATCTTGAGAAGATGAAGCTGCCTACCAAGCTTTCTGGGGTGACTGGAGACAGTCGCCACGGATCAGAGGACA
CTGCCCGTCGCCCCCCATCTGTTAAAGCTTCTCTGTCGGTTTCTTTTGGACAGCGTGTGCCGCACCGTGCTTCCACACGG
GATTCTTCCCCAGTGCGGCGAACAGTCACCCAAGATGATCATCGGAGATCATCTTCACCATTTCGTCGCAGTGTAAGTCG
GGAGGGGCCTT---------------------------------ACAATGACCGTTCAAGTCACGACCGAGAAGGTAACC
GTTCAAGCCGTGACCGAGATACTGACCGTTCAAGCCGTGATCGAGATACTGACCATTCAAGCCGTGACCGAGATACTGGC
CGTTCAAGCCGTCACCGAGAGCGTGATCGTTCAAGCCATGACAGAAAGCGTGATTATGACCGTGACAGCAGGGATTGTGA
CTATTACAGGTCCAGGCATTCAGAAGAAAGAAGGGATTACCGAAGCGAGCGTGACAATAGTAGACACAGACGCTCCAGCT
CATGTCATAGGAGCAGAAGCCGGAGTCGTAGCAAGAGCAGGAGCCGGAGTCGGAGCAGGAATGAGCATCGATCTAGTCCA
TTTGGGGATATAAGCAAAGAGAAGGCTGCTGCTGCCTCGAGCAACCTAGCTAAGCTGAAAGACCTGTACGGCGACGTAAC
TGAGAAGAAGGATGACGGTGATGCCAGGCGGCTTCACCATGATTCATGTGCCGAGGAGGTTATTAGGCTGGGAGGCCCTA
GGTGGAGATAAATTTGAACTGCCGACTCTGTCATCAAGGTCATGTTACTCCACCGTTTGATCTACCGGCTTCTGCATTGA
CATTAGTGAGAGCTCAGTCTTTGTAAACGCTTGTACTTTATGTTGGTTCATCAATCCATGTCTTTCGGACGTGCAGTCAG
TCTACCAAATTCATCAACACAACGTTATCATGTTAGGCTGAATGTTTGACGTGTACCAACTGGGTTACATGATGTCTGGC
ACTAGAGCAAAAATGAAGAATGCAATGATACATCTCTTTCATTTGAAGAAAGAATGATACATCTCTAACGCGTAAGATTG
AAATCCTTGTCATGTCATTTGAAAGCCATGTGCTAATGAGTTGCATTCAACTGCCTTGAAAATGTATATCAGAGTGGTTT
TGCTAAATCT----------------------------------------------------------------------
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>chr1D_1
GATTCCGAGTCGTACGCGACTCTCC--CACCTCCACAAATCCACAGCCGACCCTCCCCTCCCCTCCC--TCATCCATCTC
CGGCTACCTCCCAGCTACCGACGAATCCCAACCATCTCACCCGCCGCCGCCGCCGCCGAAGCCGAAGCCGCCACGAGTTC
ATCATCTACCGAGCGTCGTCATCCCGTCTTCTTTGGGGGTCTCCGCGAGCCGCCCGCGCTCTTGGAAGCCGAGGAGGTCC
T-GGGTTCGCCATCCTGCGTGTGAGTATCTCTTTCTGTCTCTGCGTACATAGATTCATCTCGCCAGTTATTAGTTAAGTG
GAGGCAAATTACTATTTTGAGACCCTTTTTGCTATTA-----GGTGCGGAATAGATGAGAATGTACTCTGACGAAATCGT
GTACGTTAACGATAGGGTTTTCGATG-ATCTGTGTGATTAATGGCCATGGAAAATTCTTTGTGT-AAAATAGTTCTAGTC
TAGTTCTACTTGGCCCCATAGAAATACAAGTGTATGGTGGGTTGCATTTATCCGCATCAGCGATTTGGAGGGATTAAGTT
ATCGGGG----------GGAATCCTTAGGCTAGATAGTGGAAAAGGCTCAGTGCAGGTTGTCTGGACATCACAGTGGGGA
CTCTCTTAATTGAGT-----ACATGGTAAAACTATCAGCCACTCTCGAGGTTTGCTTGCGTGCCATTACTTGTCACTTGT
CAGACGCACTGATAGTAACATAGTAGAATTTGTCGACCTTGAGAGCTTAATTGGGCATTTCATGGGTAGTAAGGGACACA
TGAATTTTCAGCCATTTGAGGTAAAGACTGATCTGCATTTTTCTCAGGTGGC---ATGTCTGTAAATATTTGCGTAATAT
TTCTATCAGAACTAAATCAAGTTTTCTTCGTATTTTGGGAAAAGGTTCATTATATTATACTTTTC---TACTTGTGTGTG
ACATAAGCTTTGAGGCCTTAAGC---TAAGAGGATCCCTCTGTTTTTGGTCCAGGTTTGTGTTCGCTGAAATATGGAGAT
ACAGACTTCAGGGAAGCCCATTGATATGCTGATGGAGAAGGTTCTCTGTATGAATATTCTTTCTTCTGATTACTTCAAGG
AGCTCTACCAGATGAAGACCTATCATGAGGTCATTGACGAGATCTACAACCAAGTTGATCATGTGGAGCCTTGGATGACT
GGCAATTGCAGGGGTCCTTCCACTGCATTTTGTCTCCTCTACAAGTTCTTCACAATGAAGCTTACTGTGAAACAGATGCA
TGGTTTGTTGAAGCATCCTGACTCCCCATACATTAGAGCTGTAAGTTTCTTTGACATAAGTTACTTTTGACAAATACGCG
CATCATGGTTGTTGTGTCTACTCGTTACATTTGTTTGTGATTAATGCATGCACTAGGTTGTATGTCAAAGTTGTACGAAA
ATGAAGTGTTAGTATGTTTGCAGTGACAAACTGGTGTTATCAACCTATCCTAAGCAATCAACT--------CTTCCATTT
TTTTTACGTTCACTTATTACATTTTGGTTATAACCACTAACAGTCATATGACTTGCTTTCTTGGATGGCCTTGTGTCTTG
ATTTTGGTCCTAGGACACGTGGATGAACAAAGTTTGCAAGCAGTAGTGTACCAGTCTGTGCATTGGATTTGTGAGCATTT
TTTGTTTGTCTTCATTTATCGTGTTAGATAATCAGCTGGCCTCTACTAAATAACCAATTGGTGTTTG-TTTTTGCAGATA
GGATTTTTGTATCTTCGGTATGTTGCAGATCCAAAGATCCTATGGACATGGTATGAGCCCTACTTGAAGGATGATGAGGT
ATTGCCGTTTTTGAGTTTTCATTTGTATATTTCTTGTACTTTTATGTTTTTTGCTGTTATATGTACTTTCATAAGTCCAT
AAGACCATAACCATATTGAGCTTCCATTTAATTTCCAAATAATAAGTGGATACAATCCATTAGATGAGCTATATGGCCTG
CAACTAGCTTGTTCAAAAAAGATGTGCTAATTGCAGAAGTCATGGTGTACAAACCAAGGAATACAAGTTTATAATTAATA
AGGAAATATATCGAGTCCATTTGATTTCATCATTATTAACTAATTAGCTAGTTAGCCATATAATTATTATTTTTGACTTG
ATGCAGGAATTCTCCCCTGGATCTAATGGTCGCATGACAACCATGGGTGTATATGTGCGTGATCTTATACTTGGACAGGT
CTGCATCTCAAGTTCTTGCTTTCAGAATAAAAATAAGTGCACTTGTTTGTTTGACAT-TTTTTTCCTGTTTATGTCGTTA
TAACTGAAGAATGTTTGTTCCTTTCTCTATTGGCTCACCTTTCTGTATGTAATCCTTTTAATTCTCATGTGAACTAGATT
ACTATACTACATGAGTTTATTTCTCCATGCTACTTCTCACCTTCTATTTTCTGATGCTGTTAACAGTTTTTAATCTTGTG
TTTATTGTATATATGTTCAGAAACTATGCCAACTAGCTGGACAAATTTCTTAGTCAGGCAAGTCATGATTCAACAGCATA
GCTTGTTCATAGTATATGCACTTCTCTTTTCCAAGAAGCTGTGTCAAATTCATAGATAGTTGGTTAAAGGTTTATTTGTG
ATTCTCAATGGCCATATCACAAGATTGGATTGAATTGTGTCACCTAATTTGAC--TATGTTAGCAAGTTTATATTGACCA
GCATGTTGCTCTGTTTTCCTTGTGCAGTACTACTTTGATAGTATCCTTCCAAGAGTTCCTGTTCCAGTAGTTCGTCAAGT
AACAACCAATCTTGAGAAGATGAAGCTGCCTACCAAGCTTTCTGGGGTGACTGGAGACAGTCGCCACGGATCAGAGGACA
CTGCCCGTCGCCCCTCTTCTGTTAAAGCTTCTCTGTCGGTTTCTTTTGGACAGCGTGCGCCACACCGTGCTTCCACACGG
GATTCTTCCCTAGTGCGGCGAACAGTCACCCAAGATGATCATCGGAGATCATCTTCACCATTTCGTCGCAGTGTAAGTCG
GGAGGGGCCTTACAATGACCGACAGAGAAGCACGGTGTGGCCTTACAATGACCGTTCAAGTCACGACCGAGAAGGTAACC
GTTT---------------------------AAGCCGTGACCGAGATACTGGCCGCTCAAGCCATGACCGAGATACTGGC
CGTTCAAGCCGTCACCGAGAGCGTGATCGTTCAAGCCATGACAGAGAGCGTGATTATGACCGTGACAGCAGGGATTGTGA
CTATTACAGGTCCAGGCATTCAGAAGAAAGAAGGGATTACCGAAGCGAGTGTGACAACAGTAGACACAGACGCTCCAGCT
CATGTCATAGGAGCAGAAGCCGGAGTCGTAGCAGGAGCAGGAGCCGGAGTCGGAGCAAGAATGAGCATCGATCTAGTCCA
TTTGGGGATACAAGCAAAGAGAAGGCTGCTGCTGCCTCGAGTAACCTAGCTAAGCTGAAAGACCTGTACGGCGACGTAAC
TGAGAAGAAGGATGACGGTGATGCCAGGCGGCTTCACCATGATTCATGTGCCGAGGAGGTTATTAGGCTGGGAGGCCCTA
GGTGGAGATAAATTTGAACCGCCGACTCTGTCATCAAGGTCATGTTACTCCACCGTTTGATCTACCGGCTTCTGCATTGA
CATTAGTGAGAGCTCAGTCTTTGTAAACACTAGTAC--------------------------------------------
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>chr1D_3588
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----------------------GTAAAGACTAGTACTTTATATTGGTTCATCAATCCATGTCCTTCGGACGTGCA-----
-----------CATCGACACAACGTTATCATGTTAGGCTGAATGTTTGACGTGTACCAACTGGGTTACACGATGTATGGC
ACTAGAGCAAAAATGAAGAATGCAATGATACATCTCTTTCATTTGAAGAAAGAATCATACATCTCTAACGCTTAAGATTG
AAATCTTT-TCATGTCATGTGAAAGCCATGTGCTAATGAGTTGCATTCAACTGCCTTGAAAATGTATACCAGAGTGGTTT
TGCTAAATCTCAGGTGCCTGAAATTTTAGTTTGTGTCCGTAAGTTCCTGCATTGCACGGGGCTGGTGGTGGGACAACGTC
AGGAGCGGCACGCCGAGGCTGAGCCAA-GACCATTGCGGCGTCTCAGGTGGAGGCGAGGAAGAAACTTAAGGGCATCTCC
GTCTCAGGTGGAGGCGAGGAAGAAACTTAAGGGCATCTCCGATGCCGACCATTAAATCATACGGTCCGGACATGTGCCAA
CGAACGGGGAT-GTACGGTCCGGAAAAGTGCCAACGAACGCTGGCCTGTATCGGTCCACTTGACAGTCCGGATGCACA--
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>SNPs
-------------------------SS---------------------------------------------S-------
-S--------------------------------------------------------S---------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-SSS----------------------------S---------
-----------------------------------------S---S-S----------------S---------------
--------------------------------------------------------------------------------
-------SS-SSSSSSS----------------------------------------------------------S----
-----------------------------------------------S--------------------------------
-------------S------------------S-----------------------------------------------
--------------------------------------------------------S-----------------------
------------------S-------------------------------------------------------------
------------------------S-------------------------------------------------------
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--------S-----------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------S-----------------------------------------------------------------------
-------------------------------------------------------------SSSSSSSSSS---------
------S--------------------------------------------------------S----------------
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--------------------S----------------------------------------------S------------
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---------------------------------------------------------------S----------------
------------S-------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------------------S------------SSS-------------------S--------
--------------------------------S----------------S------------------------------
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-----------------------------------------------------S--------------------------
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-S------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
-------------------------------------------------------------------------------S
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----------------S-----------S----------------------------------S---S------------
-------------------------------------------------------------------------------S
------------S-S-----------------------------------------------------------------
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-------------------------------------------------------------------S------------
---------------------S--------------SS-------S---------S-----------------------S
---------------------------S---S--------S--SSSS---------------------------------
----------------------------S---------S-----SS-S--------------------------------
-----------S------------S-S----S------S--S---S----------------S-S-----S-S-----SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_82
---------------------------------------------------------------CCTCCCTCACCCATCTC
CA------------------------------------------------------------------------------
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>reverse_1209
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--------TAGGGGTCCTTCCACTGCAT----------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_636
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGGTTGTCTGGACATCACAGTT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_2534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GCAGGCAAGTCATGGTTCAA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_2178
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
ATGCAGGAATTCTCCCCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_4265
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CATGTGCTAACGAATGCGGG------------------------------------
--------------------------------------------------------------------------------
----------------------------
