>input_sequence_35474
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----------------------------------AAACATCAAGGCATCTGCCAATCATACGGTGCAGCGGTACAGAGCA
GCTCGAGCCAAACCACAAATGGCGGCGAAGAAGGGCCTTCTCGCCGCCGTCCTGCTCCTGTCCTTGCTGAGCTCGCCGCT
GCCTTCGCGCGCCCAGGCATCGTCGTCGTTCCCCGTCAATGTCTGGCCCAAGCCGACGTCCATGTCCTGGGCGGAGCCTC
TCGCCGCCATGCCGGTGTCCGCGTCGTTCCGCATCGTCGGGACGTCCGGGAACAGCCCGTACCTCGTCTCCGCCACGCAG
CGCTACACCGCGCTGCTCTTCGCCGAGAGGTACAGGCCCATCGTCCGGCCGGCGGTCAATGTCACCGCCGGGGGCCCCGC
GCTCCAGAGCCTGACCGTGTCCGTGTCCGACCTGTCCGCCCCGCTCCAGGACGGCGTGGACGAGTCCTACGCGCTGGAAA
TCCTCCCCACGGGCGTGGCCACCATCACGGCTGCCACGGTATGGGCCGCCATGCACGGGCTGGAGACGTTCTCGCAGCTC
GCGTGGAGGGGCCGGCAAGGGGAGCTGCTGGTGGCCGCCGGCGTGCGCGTGGAGGACAAGCCTTTGTACCAGCACCGGGG
CCTGATGCTCGATACCGGGAGGACCTACTTCCCCGTCGTGGACATCCTGCGGACGATAGACACCATGGCGGCCAACAAGA
TGAACGTGTTCCACTGGCACATCACGGACTCGCAGTCGTTCCCCATCGAGCTGCCGTCCGAGCCGATGCTCGCGGAGATG
GGCGCGTACGGTGAGGACATGAGGTACACCGTCAAGGACGTCAAGCGCATCGTCGAGTTCGCCATGAGCCGCGGCGTCCG
CGTCGTGCCGGAGATAGACGCGCCGGGTAATTAAGCAC--GCTGACACGGCTGCTATT----------------------
------------------TTTC-CCATTCGGCCTACTAAGCAATGTGCTGACACGGCCCAGTTTTTAAGGTAACACGGCC
CAGTTGATGAACGAGCTAATCT----------TTTCAGGCCACACGGCGTCGTGGGCCGGCGCGTACCCGGAGGCGGTGT
CCTGCGCGGGCAAGTTCTGGCTGCCCGACGCGAGCGACTGGGGCACCAGGCTCGCGGCCGAGCCGGGGTCCGGCCAGCTG
AACCCGCTGGAGCCCAAGACGTACGAGGTGATGACCAACATCATCAACGACCTCACCTCCCTCTTCCCGGAAGGCTTCTA
CCACGCCGGCGCCGACGAGGTGACCCCGGGATGCTGGGAGACGGACCCGTCGATCCAGGCGGACATGGAGAAGGGCGGCA
CCCTGAGCCAGCTCCTGGAGCACTACGTGCGCGCGGTGCACCCACACGTCGTGTCCAAGAACCGGACGGTGGTGTTCTGG
GAGGACGTGCTGCTGGACCTGGAGGTGAACGTGAGTTCGTCGGTGATCCCGCCGGCGACGACCATCCTGCAGACGTGGAA
CAACGGGGCCAACAACACGAAGCTGATCGTGCAGGCCGGGTACCGCGCCATCGTCTCCTCCGCGTCCTTCTACTACCTCG
ACTGCGGCCACGGCGACTTCGTCGGGAACAACAGCGTGTACGACGACCAGAGGAGCGACTACAAGACGGACGGGGGCTCG
TGGTGCGGGCCGTTCAAGACGTGGCAACGGGTGTACGACTACGACATCGCGTACAATCTCACCGCGGAAGAGGCCAAGCT
GGTCATCGGCGGCGAGGTGGCGCTGTGGACGGAGCAGGCCGACTCGACGGTCCTGGACGCCAGGATCTGGCCGCGGGCGT
CGGCCATGGCGGAGGCGCTGTGGTCCGGCAACCGCGACGCGTCCGGGAGGAAGCGGTACGCGGAGGCCACGGACAGGCTC
AACGACTGGCGGCACCGCATGGTGGGGCGAGGGATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCCGCACGCGCCCGGG
AATGTGCGACATGGTTCGGTGAGGGGCCGGCAAGAAGCGGCGCCTGCGTACGCGCCGTTGCGTGTGCCAACTCCGAGCAT
---TACCTTCCATTCATATCAAACGTGTCAAACTAAATTATGTAAGTGAGCTAAAGCATCTATGGTGTTTCCTTTTTGTT
GTGTGGTTGTGCGGAGAATACTACCAGCAGTGCCATTTTTTTGTCAATTTGTTCTTTGTTTGTAAATGTGAAGTGGACGG
CATGTCATGTTATCCAATGCGCAGTTGTACCTTCCTCAAAGCTGGACCTTTTCATGGGACCCATTCGCCAAATGAGTTGC
TT-GTACTGGGGCTTGATTTGATTAAA-----------------------------------------------------
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>chr2B_1_TraesCS2B01G221500
TTTAGCATTTTTCAAATACATATGTTTTGATGTCTATTTTCCATACACATTATACAATTTTCTTATACATTAGATACATT
TTTC-ATACGCGTTTAACATTGTTCTAATGCGGG-TTAATGTTTTTCAAATTTTGCATATAAATTTATTTTTG-AATAGA
TATATTCACAACATTAT-AAATACAAGTAAAATAAAAAAAGTAAAACAAAAAAGGAACGAAAAATATAAAAAAGAATTTT
A-------------------------------------------------------------------------------
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------------------------AAAGCCCTGAAGGCTTGTCCGCGCTGGGAGGCCCAATCGGGCGTCTGCTGAAGCGA
GACCTCCTTCTGTCTCGCG-CAGGCGAGACATAGGGGCGCCCCTCTTTACCACCCCAAATCGACGTGT--------AACT
ATTTTTCAATCGCTTGTGAAATAGCAAATCCGGGCAGCAGATCATG--AGAATCAAACACAGCCGTGAGAGTAGTTAAAG
ACTCTGGTGCTCGTTTTGTGTCTGTTTCG---------------TTCTGAACCAATAAGGCTAGTTGCTAAAATAAAGCC
AAGTCTGGTTCGTCTACCACCATATGGCTCATGCACACTGCTCGAGCCCTACTGCACCTGTGGCGGCATTAAAATAACCG
ACGTGTTATAGTGTTCACCTACGGATCTTATTA---TAG--TACAATCAGCAGGCCGTACACTGCCTGATTAGGGATTAC
GTCCGCCTAAACTTGTACAGCTATTAGTAAACTACTACTGCCGTTGCAGCCGTTCCACTACATCTTTTAGGCCGAGAAAC
CCAATAGAAAACGTGTAGTCATCGCTGGCTAACCGGCAT-----ACATAAGGCAGAACGCCGGCATCGTATAT-------
GAGATAAAACGCCACGAAACCGGAGCTTTCAGAAATGGACGAACGGTAGCGCCAAGGCGCCCTGAAAGAGCCACTTGGAG
TCTTGCGATAAGCGCGCGCGTAGATGACAACAACACGCCGAGCCATGCCGTTGATCACATAGCTAAGCTACGCCTTATAT
AAATCGAATGGCACATTGATGCATACAC----CCAAACATCAAGGCATCTGCCAATCATACGGTGCAGCGGTACAGAGCA
GCTCGAGCCAAACCACAAATGGCGGCGAAGAAGGGCCTTCTCGCCGCCGTCCTGCTCCTGTCCTTGCTGAGCTCGCCGCT
GCCTTCGCGCGCCCAGGCATCGTCGTCGTTCCCCGTCAATGTCTGGCCCAAGCCGACGTCCATGTCCTGGGCGGAGCCTC
TCGCCGCCATGCCGGTGTCCGCGTCGTTCCGCATCGTCGGGACGTCCGGGAACAGCCCGTACCTCGTCTCCGCCACGCAG
CGCTACACCGCGCTGCTCTTCGCCGAGAGGTACAGGCCCATCGTCCGGCCGGCGGTCAATGTCACCGCCGGGGGCCCCGC
GCTCCAGAGCCTGACCGTGTCCGTGTCCGACCTGTCCGCCCCGCTCCAGGACGGCGTGGACGAGTCCTACGCGCTGGAAA
TCCTCCCCACGGGCGTGGCCACCATCACGGCTGCCACGGTATGGGCCGCCATGCACGGGCTGGAGACGTTCTCGCAGCTC
GCGTGGAGGGGCCGGCAAGGGGAGCTGCTGGTGGCCGCCGGCGTGCGCGTGGAGGACAAGCCTTTGTACCAGCACCGGGG
CCTGATGCTCGATACCGGGAGGACCTACTTCCCCGTCGTGGACATCCTGCGGACGATAGACACCATGGCGGCCAACAAGA
TGAACGTGTTCCACTGGCACATCACGGACTCGCAGTCGTTCCCCATCGAGCTGCCGTCCGAGCCGATGCTCGCGGAGATG
GGCGCGTACGGTGAGGACATGAGGTACACCGTCAAGGACGTCAAGCGCATCGTCGAGTTCGCCATGAGCCGCGGCGTCCG
CGTCGTGCCGGAGATAGACGCGCCGGGTAATTAAGCAC--GCTGACACGGCTGCTATT----------------------
------------------TTTC-CCATTCGGCCTACTAAGCAATGTGCTGACACGGCCCAGTTTTTAAGGTAACACGGCC
CAGTTGATGAACGAGCTAATCT----------TTTCAGGCCACACGGCGTCGTGGGCCGGCGCGTACCCGGAGGCGGTGT
CCTGCGCGGGCAAGTTCTGGCTGCCCGACGCGAGCGACTGGGGCACCAGGCTCGCGGCCGAGCCGGGGTCCGGCCAGCTG
AACCCGCTGGAGCCCAAGACGTACGAGGTGATGACCAACATCATCAACGACCTCACCTCCCTCTTCCCGGAAGGCTTCTA
CCACGCCGGCGCCGACGAGGTGACCCCGGGATGCTGGGAGACGGACCCGTCGATCCAGGCGGACATGGAGAAGGGCGGCA
CCCTGAGCCAGCTCCTGGAGCACTACGTGCGCGCGGTGCACCCACACGTCGTGTCCAAGAACCGGACGGTGGTGTTCTGG
GAGGACGTGCTGCTGGACCTGGAGGTGAACGTGAGTTCGTCGGTGATCCCGCCGGCGACGACCATCCTGCAGACGTGGAA
CAACGGGGCCAACAACACGAAGCTGATCGTGCAGGCCGGGTACCGCGCCATCGTCTCCTCCGCGTCCTTCTACTACCTCG
ACTGCGGCCACGGCGACTTCGTCGGGAACAACAGCGTGTACGACGACCAGAGGAGCGACTACAAGACGGACGGGGGCTCG
TGGTGCGGGCCGTTCAAGACGTGGCAACGGGTGTACGACTACGACATCGCGTACAATCTCACCGCGGAAGAGGCCAAGCT
GGTCATCGGCGGCGAGGTGGCGCTGTGGACGGAGCAGGCCGACTCGACGGTCCTGGACGCCAGGATCTGGCCGCGGGCGT
CGGCCATGGCGGAGGCGCTGTGGTCCGGCAACCGCGACGCGTCCGGGAGGAAGCGGTACGCGGAGGCCACGGACAGGCTC
AACGACTGGCGGCACCGCATGGTGGGGCGAGGGATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCCGCACGCGCCCGGG
AATGTGCGACATGGTTCGGTGAGGGGCCGGCAAGAAGCGGCGCCTGCGTACGCGCCGTTGCGTGTGCCAACTCCGAGCAT
---TACCTTCCATTCATATCAAACGTGTCAAACTAAATTATGTAAGTGAGCTAAAGCATCTATGGTGTTTCCTTTTTGTT
GTGTGGTTGTGCGGAGAATACTACCAGCAGTGCCATTTTTTTGTCAATTTGTTCTTTGTTTGTAAATGTGAAGTGGACGG
CATGTCATGTTATCCAATGCGCAGTTGTACCTTCCTCAAAGCTGGACCTTTTCATGGGACCCATTCGCCAAATGAGTTGC
TT-GTACTGGGGCTTGATTTGATTAAAGTAATGCCAAGTTGTTTGTGTCAATCAACTTCTACTTTTTCCTCCTGGAATTT
-CTCCATTATCGCTTATAATTGCTTATTTGGAGATGTCACATGGACAGTAGGGCTTTTTTTTAGCCCAACGGAGCTTCCT
TTGTTGTGAATGAGATGCGTTTCACACTGCAGCATGACATCGGTTGAACTGTAAAAAAAATGA-AATCGGGTGAAATGAA
CGCCGGAAGAGAATATCTAAAATTCTCAGGGCTCCTTTGATTCAAAGGATTTGCATAGCAGTATTAGGGGATTAATCCTT
ATAATTTTTTCCTAGTTGGTCATTCGATTCATATGATTGAATCATATATAGAAATTTTCTCTAAGAAATTCTTTGACCTA
CTT----AGA----------------------------------GTCCTTTGTTTTTCCTATGTTGCAATTAAACAACCC
AAAATCATGCAGGATTGAGATGTTTTGACCTTCTAATCTTATGTT-----------------------------------
------TTTTCTATTCCCATGTTTTTAGAATCCCGCGAATTAAAGAGGCTCTTGCAATCGCATGTTAAAGGCGACTTGAA
ACGTGGATCATCAAAATGGAACTTCTTAAATGTGTGTGGGGATAAGGCGGAGGCAATCCAACGGCAGGTACCGAATGTCC
GCTTTCAATTTATTTTCTTATACCCGAACTATTCAAAACAATCAAAGATGTAATAACATGTTCTTACAACTGAAA-ATAA
ATATTCGAATGCAATAATAATTTGAATTAA-AAAATCCAGACATAAAATTTTGAAATAAAATAGTTTATGCTTAAATTTA
GGGACAATTGCATTTTTGTCCCTATTTAGAACCTACGTGTTGAAATATGAGGGTGGGCCTAGGG----------------
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-----------------------------------------------------CCCATCTAACAAATTCAGAAAATCAAC
CCCTCAAAAGAAACAAATTCAGAAAATCTCCAAAGGCTAATGTGGGTTATATGGCGGTAGCTGTGGTGGGAAGTGTAGTC
CCATACCGGTAGTTGGAGAGGAGTTTGATCTAAGGGATTCTCTTACGCATGCTATTGGA
>chr2A_16
---------------ATACATATGTTTTGATGTCTATTTTTCGTACACATTATACAATTTTCTTATACATTATATACATT
TTTCTATACACGTTTAACATTGTTCTAATGCGGGATTAATGTTTTCCATCAATTATATATAAATTTATTTTTGCAATAGA
TATATTCACAATATTTGCAAATACAAGCAAAGGTAAAAAAC---AAAAAAAATGGAATAAAAATGTAAAAAAAGAATTAA
AAAAACACTAAATGCCTTTTTTTGAACCGGCCTTACCCCTTTCCATTACAAGAACGAAAATACAACTGTTCCAACAACAT
TCAGGAGAAGAGGAAAGAGAGGTAGCGAGCCCAACGCACTGCCAGGAAAACTACTGCCCTTGCTCGCCATCGAAACTAGT
ACTATTGGGCGAAAACCTGACAGCAAAGCACTCAAAGCTTGTCCGCACTGGGT-GCCCAATCGGGCAT---CTGAAGCGG
GGCGTCCTTCTTTCTCGCGTCAGGCGAGACATAGGAGCGCCCCTCTTTACCACCCAAAATCGACTGACAGACATGCAACG
ATTTTTCAGTCGCCTATGAGCTAGCAAATCCGGGCAAACTAGATTAACAGAATCAAGCACAGCCGTGAAAGTAGTAAAAG
ACT-----GCTCAGTTTGTGCATGTTTCGCCTATGCAATTTACTTTCTGAACCAACAAGGCTAGCTGCTAAAATAAAGCC
AAGCCTGGTTCGTCTACCACCATATGGCTCATGCACACTGCG------CTACTGCAACTGTGACGGCATTAAAATAGCCG
ACGTGTTATAGTGTTCGCCTACGGATCTCATTAGTATAG--TACAATCAGCAGGCCGTACACTGTCTGATTAGGGATTAC
GTCTGCCTAAACTTGTACTGGTATTAGTAAACTACTACTGCCGTTGCAGCCGTTCCACTACATCTTTTAGACCAAGAAAC
CCAATAGAAAACGTGTAGTCATCGCTGGCTAACCGGCATACATAACATAAGGCAGAACGCCGGCATCGTATATACAGCAT
GAGATAATACGCCACGAAACCGGAGCTTTCAGAAATGGACGAACGGTAGCGCCAAGGCGCCATGAAAGAGCCACTTGGAG
CCTTGTGATAAGCGCGCGCGTAGATG---ACAACACGCCGAGCAATGTCGTTAATCACATTGTTAAGCTACGACTTATAT
AAATCGAATGGCACATCGATGCGTACAC----C----CATCAAGGCATCTCCCAATCATACGGTGCAGCGGCACAGAGCA
GCTCGAGCCAAACCACAAATGGCGGCGAAGAAGGGCCTTCTCGCCGCCGTCCTGCTCCTGTCCTTGCTGAGCTCCCCGCT
GCCGTCGCGCGCCCAGGCATCGGT---GTTCCCCGTCAATGTGTGGCCCAAGCCGACGTCCATGTCCTGGGCGGAGCCGC
TCGCGGCCATGCCGGTGTCCGCGTCGTTCCGCATCGTCGGCACGTCCGGGGACAGCCCGTACCTCGTCTCCGCCACGCAG
CGCTACACCGCGCTGCTCTTCGCCGAGAGGTACAGGCCCATCGTCCGGCCGGCGGTCAATGTCACCGCCGGGGGCCCCGC
GCTCCAGAGCCTGACCGTGTCCGTGTCCGACCTGTCCGCCCCGCTCCAGGACGGCGTGGACGAGTCCTACGAGCTGGAAA
TCCTCCCCACGGGCGTGGCCACCATCACGGCTGCCACGGTATGGGCCGCCATGCACGGGCTGGAGACGTTCTCGCAGCTC
GCGTGGAGGGGCCGGCAAGGGGAGCTGCTGGTGGCCACCGGCGTGCGCGTGGAGGACAAGCCTTTGTACCAGCACCGCGG
CCTGATGCTCGACACCGGGAGGACCTACTTCCCCGTCGTCGACATCCTGCGGACGATAGACACCATGGCGGCCAACAAGA
TGAACGTGTTCCACTGGCACATCACGGACTCGCAGTCGTTCCCCATCGAGCTGCCGTCCGAGCCGATGCTCGCGGAGATG
GGCGCGTACGGCGAGGACATGAGGTACACCGTCAAGGACGTCAAGCGCATCGTCGAGTTCGCCATGAGCCGCGGCGTCCG
CGTCGTGCCGGAGATCGACGCACCGGGTAA----GCAAAAGCTGACACGGCTGCTATTTCCCCCGCAAAAAGAAAAGAGA
AAAAGACATGGCTGCTATTTTTGCCATTCGGCCCACTAAGCAATGTGCTTACACGGCTCAGTTTCTAAGGTAATACGGCC
CAGTTGATGAACGAGCTAATCTGTTGCCATA-TTTCAGGCCACACGGCGTCGTGGGCCGGCGCGTACCCGGAGGCGGTGT
CCTGCGCGGGCAAGTTCTGGCTGCCCGACGCGAGCGACTGGGGCACCAGGCTGGCGGCGGAGCCGGGGTCCGGGCAGCTG
AACCCGCTGGAGCCCAAGACGTACGAGGTGGTGGCCAACATCATCGACGACATCACCTCCATGTTCCCGGAGGGCTTCTA
CCACGCCGGCGCCGACGAGGTGACGCCGGGATGCTGGGAGACGGACCCGTCGATCCAGGCGGACATGGAGAAGGGCGGCA
CCCTGAGCCAGCTCCTGGAGCGGTACGTGCGCGCGGTGCACCCGCACGTGGTGTCCAAGAACCGCACGGTGGTGTTCTGG
GAGGACGTGCTGCTGGACGTGGAGGTGAACGTGAGCGCGTCGGTGATCCCGCCGGCGACGACCATCCTGCAGACGTGGAA
CAACGGGGCCAACAACACGAAGCTGATCGTGCAGGCCGGGTACCGCGCCATCGTCTCCTCGGCCTCCTTCTACTACCTCG
ACTGCGGCCACGGCGACTTCGTCGGGAACAACAGCGTGTACGACGACCAGAGGAGCGACTACAAGACGGACGGGGGCTCC
TGGTGCGGGCCGTTCAAGACGTGGCAGCGGGTGTACGACTACGACGTCGCGTACGGGCTCACCGCGGAGGAGGCCAAGCT
GGTCATCGGCGGCGAGGTGGCGCTGTGGACGGAGCAGGCCGACGCGACGGTCCTGGACGCCAGGATCTGGCCGCGGGCGT
CGGCCATGGCGGAGGCGCTGTGGTCCGGCAACCGCGACGCGTCCGGCAGGAAGCGGTACGCGGAGGCCACGGACAGGCTC
ACCGACTGGCGGCACCGCATGGTGGGGCGAGGGGTCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCCGCACGCGCCCGGG
AATGTGCGACCTGGTTCGGTAGCGACCCGACAAGGAGCGGCGCGCGCGTACGCGCCGTTGCGTGTGCCAACTCTGAGCAT
CATTACCTTTCATTCATATCAAACGTGTCAAACTAAATTATGTAAGTGAGCTAAAGCATGTATGGTGTTTCCTTTTTGTT
GTGTGATTGTGCGGAGAATACTACCAGCAGTGCCATTTTTTTGTCAACTTGTTCTTTGTTTGTAAATGTGAAGTGGACGG
CATGTCATGTTATCCAATGCGCAGTTGTACCTTCCTCAAAGCCGGACCTTTTCATGGGACCCATTCGCCAAATGAGTTGC
TT-GTACTGGGGCTTGATTTGATTAAAGTAATGCCAACTTGTTTGTGTCAATCAACTTCTACTTTTTCCTCCTGGAATTT
CCTCCATTATCGCTTA--ATTGCTTATTTTGAGATATCACATGGACAATAGAGTTTTTCTTTAGCCCAATAGAGCTTCCT
TTGTTGTGAATGAGATGCGTTTCACACTGCAGCATGACATCGGCTGAAGTGTAAAACAAAAAGGCATTGGGTGAAGTGAA
CGCCGGAAAAGAATATCTAAAATTCTCAGGGCTCCTTTGATTCAGAGGATTTGCATAGCAGTTTTAGGGGATTAATCCTT
ATAATTTTTTCCTAGTTGGTTATTCGATTCATATGATTGAATCATATGTAGAAATTTTCTCTAAGAAATTCTTTGAACTA
CTTCCCTTAGTAGTTCCAGCATCCACTTAAACCACTTAGAAAGGGTCCTTTGTTTCTTCTATGTTGCAATCAAACAACCC
AAAATCCTATAGGATTGAGATGTTTTGACCTTCTAATCCTATGCCTTTTCTGAAAAAGAGATGTTTTGACCTTCTAATCC
TATGCCTTTTCTATTCCCAAGTTTTTAGAATCCTGCAAATCAAAGAGGCCCTTGCAATCGCATGTTAAAGGCAACTCGAA
ATGTGGGTCACCAAAATGGAACTTCTTAAATGTCTGTGGGGATAGGGTGGAGGCAATCCGACGACAAGTACCGAATGTCC
GCTTTCAATTTATTTGTTTATACCCGAACTATTCAAAACAATCAAAGATATAATAACATATTCTTACAATTGAAAGATAA
ATATTCGAATGCAACAATAATTTGAATTAG-AAAATCCAAACATAAAATTTTGAAATAAAATAGTTTATGCTTAAATTTA
GGGACAATTGAATTTTTGCCCCTAGTTGGAACCTACCTGTTGAAATATGAGGGTGGGCCTAGGG----------------
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-----------------------------------------------------CCCATCTAACAAATTCAGAAAATC---
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>chr2D_237
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A-------------------------------------------------------------------------------
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------------------------AAAGCACTCAAAGCCTGTCCGCACTGGGTGGCCCAATCGGGCAT---CTGAAGCGG
GACGTCCTTCTGTCTCGCGTCAGGCGAGACATA-------CCCTCTTTACCACCCAAAATCGACTGACA----TGCAACG
ATTTTTCAGTCGCCTGTGAGCTAGCAAATCCGGGCAAACTAGATTAACAGAATCAAGCACAGCCGTGAAAGTAGTAAAAG
ACC-----GCTCAGTTTGTGCCTGTTTCGCCTATGCAATTTACTTTCTGAACCAACAAGGCTAGCTGCTAAAATAAAGCC
AAGCCTGGTTCGTCTACCACCATATGGCTCATGCACACTGCG------CTACTTCACCTGTGACGGCATTAAAATAGCAG
ACGTGTTATAGTGTTCGCCTACGGATCTTATTA---TAGTATACAATCAGCAGGCCGTACACTGTCTGATTAGTGATTAC
GTCTGCCTAAACTTGTACTAGCAA---TAAACTACTACTGCCGTTGCAGCCATTCCACTACATCGTTTAGGCCAAGAAAC
CCAATAGAAAACGTGTACTCGTCGCAGTCTACCCGGCAT-----ACATAAGGCATAACGCCGGCATCGTATATACAGTAT
GAGATAATACGCCACGAAACAGTAGTTTTCAGAAATGGACGAACGGTA------AGGCGCCCTGAAAGAGCCACTTGGAG
CCTTGTGATAAGCGCGCGCGTAGATGACAACAACACGCCGAGCGATGCCGTTAATCACATAGCTAAGCAACGTCTTATAT
AAATCGAATGGCGCATTGATGCATACACCCATC----CATCAAGGCATCTGCCAATCATACGGTGCAGCGGCACAGAGCA
GCTCGAGCCAAAGCACAAATGGCGGCGAAGGAGGCCTTTCTCGCCGTCGTCCTGCTCCTGTCCTTGCTGAGCTCGCCGCT
GCCGTCGGGCGCCCAGGCATCGGT---GTTCCCCGTCAATGTCTGGCCCAAGCCGACGTCCATGTCCTGGGCAGAGCCTC
TCGCCGCCATACCGGTGTCCGCGTCGTTCCGCATCGTGGGGACGTCCGGGAACAGCCCGTACCTCGTCTCCGCCACGCAG
CGCTACACCGCGCTGCTCTTCGCCGAGAGGTACAGGCCCATCGTGCGGCCGGCGGTCAATGTCACCGCTGGGGGCCCCGC
GCTCCAGAGCCTGACCGTGTCCGTGTCCGACCTGTCCGCCCCGCTCCAGGACGGCGTGGACGAGTCCTACGAGCTGGAAA
TCCTCCCCACGGGCGTGGCCACCATCACGGCGGCCACGGTGTGGGGCGCCATGCACGGGTTGGAGTCGTTCTCGCAGCTC
GCGTGGAGGGGCCGGCAAGGGGAGCTGCTGGTGGCCGCCGGCGTGCGCGTGGAGGACAAGCCTTTGTACCAGCACCGTGG
CCTGATGCTCGACACCGGGAGGACCTACTTCCCCGTCGTCGACATCCTGCGGACCATCGACACCATGGCGGCCAACAAGA
TGAACGTGTTCCACTGGCACATCACGGACTCGCAGTCGTTCCCCATCGAGCTGCCGTCCGAGCCGATGCTCGCTGAGATG
GGCGCGTACGGTGAGGACATGAGGTACACCGTCAAGGACGTCCAGCGCATCGTCGAGTTCGCCATGAGCCGCGGCGTCCG
CGTCGTGCCGGAGATCGACGCACCTGGTAA----GCAA--GCTGACACGGCTGCTATTGCCCCCGCAAAAAAAAAGAGAG
AAAAAACATGGCTGCTATTTTC-CCATTCGGCCCACTAAGCAATGCGCTGACACGGCCCAGTTTCTAAGGTAATACGGCC
CAGTTGATGAACGAGCTAATCTGTTGCCATCGTTTCAGGCCACACGGCGTCGTGGGCCGGCGCGTACCCGGAGGCGGTCT
CCTGCGCGGGCAAGTTCTGGCTGCCGGACGCGAGCGACTGGGGCAGCAGGCTCGCGGCCGAGCCGGGGTCCGGCCAGCTG
AACCCGCTGGAGCCCAAGACGTACGAGGTGGTGGCCAACATCATCAACGACATCACCTCCATGTTCCCGGAGGGCCTCTA
CCACGCCGGCGCCGACGAGGTGACGCCGGGATGCTGGGAGACGGACCCGTCGATCCAGGCGGACATGGAGAAGGGCGGCA
CCCTGAGCCAGCTCCTGGAGCGGTACGTGCGCGCGGTGCACCCGCACGTGGTGTCCAAGAACCGCACGGTGGTGTTCTGG
GAGGACGTGCTGCTGGACGTGGAGGTGAACGTGAGCTCGTCGGTGATCCCGCCCGCCACCACCATCCTGCAGACGTGGAA
CAACGGGGCCAACAACACGAAGCTGATCGTGCAGGCCGGTTACCGCGCCATCGTCTCCTCGGCCTCCTTCTACTACCTCG
ACTGCGGCCACGGCGACTTCGTCGGGAACAACAGCGTGTACGACGACCAGAGGAGCGACTACAAGACGGACGGGGGCTCC
TGGTGCGGGCCGTTCAAGACGTGGCAGCGGGTGTACGACTACGACATCGCGTACGGGCTCACGGCGGAGGAGGCCAAGCT
GGTCATCGGCGGCGAGGTGGCGCTGTGGACGGAGCAGGCCGACTCCACGGTGCTGGACGCCAGGATCTGGCCGCGGGCGT
CGGCCATGGCGGAGGCGCTGTGGTCCGGCAACCGCGACGCGTCCGGCCGGAAGCGGTACGCGGAGGCCACGGACAGGCTC
AACGACTGGCGGCACCGCATGGTGGGGCGAGGGATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCCGCACGCGCCCCGG
AATGTGCGACCTGGTTCGATGAGGGCCCGACAAGAAGCGGCGCGTGCGTACGCGCCGTTGCGTGTGCCAACTCTGAGC--
-ATTACCTTTCATTCATATTGAACGTGTCAAACTAAATTATGTAAGTGAGCTAAAGCATGTATGGTGTTTCCTTTTTGTT
GTGTGATTGTGC---------------------CATTTTTTTGTCAATTTGTTCTTTGTTTGTAAATGTGAAGTGGACGG
CATGTCATGTTGCCCAATGCGCAGTTGTACCTTCTTCAAAGCCGGGCTTTTTCATGGGACCCATTCGCCAAATGAGTTGC
TTTGTACCGAGGCTTGATTTGATTAAAGTAATGCCAAGTTGTTTGTGTCAATCAACCTCTACTTTTTCCTCCGGGAATTT
CTTC-----------ATTATTGCTTATTTGGAGATATCACATGGACAATAGAGTT-TTCTTTAGCCCAATAGAGCTTCCT
TTGTTGTGAATGAGATGCGTTTCATACTGCAGCATGACATCGGCTGAAGTGTAAAAAAA--GA-CATAGGATGAAGTGAA
CGCCGGAAAAGAATATCTAAAATTCTCAGGGCTCCTTTGATTCAAAGGATTTGCATACCAGTTTTAGGGGATTAATCCTT
ATAATCTTTTCCTAGTTGGTTATTCGATTCATATGATTGAATCATATATATAAATTTTCTCTAAGAAATTCTTTGAACTA
CTTAGAAAGA----------------------------------GTCCTTTGTTTTTCCTATGTTGCAATTAAACAACCC
AAAATCATGTAGGATTGAGATGTTTTGACCTTCTAATCCTATGTT-----------------------------------
------CTTTCTATTCCCATGTTTTTAGAATCCCGTGAATCAAAGAGGCCCTTGCAATTGCATGTTAAAGGCGACTCGAA
ATGTGGATCATCAAAATGGAACTTCTTAAATGTGTGTGGGGATAGGGCGGAGGCAATCCATCAACGGGTACCGAATGTCC
GCTTTCAATTTATTTTTTTAGACCCGAACTATTCTAAACAATCAAAGATATAATAACATGTTCTTACAATTGAAAGATAA
ATATTCGAATGCAATAATAATTTGAATTAAAAAAATCCAAACATAAAATTTTGAAATAAAATAGTTTATGCTTAAATTTA
GGGACAATTGCATTTTTGCCCCTAGTTAGAACCTACGTGTTGAAATATGAGGGTGGGCCTAGGGTTAAGTAAATATGCCC
TAGAGGCAATAATAAAGTTGTTATTTATATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAAC
CGGAAACTTAGTACATGTGTGAATACATGGACAAAACAGAGTGTCCCTAATATGCCTCTACTTGACTAGCTCATTAATCA
AAGATGGTTAAGTTTCCTGACCATAGACATGTGTTGTCATTTGATGAACGGGATCACATCATTAGAGAATGATGTGATGG
ACAAGACCCATCCGTTAGCTTAGCGTTATGATCGTTTAGTTTTATTGCTATTGCTTTCTTAATGACTTATACATGTTCCT
CTGACTATGAGATTATGCAACTCCCGAATACCGCAGGAACACCTTGTGTGCTATCAAACGTCACAACATAACTAGGTGAT
TATAAAGATGCTCTACAGGTGTCTCCGAAGGTGTTTGTTGGGTTGGCATAGATGATTTGTCACTCCGTGTATCGGAGAGG
TATCTCTGGGCCCTCTCGGTAATGCACATCACTATAAGCCTTGCAAGCAATGTGACTAATGAGTTAGTTGCGGGATGATG
CATTGCGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATGTGGATACGGGCAGTCGAATCTCGGGCAA
GTAACATACCGATGACAAAGGGAATGACGTATGTTGTTATGCGGTTTGACCGATAAAGATATTCGTAGAATATGTAGGAA
CCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACTGGAGATATGTCTCGGTCATGTCTACATAGTTCTTGAACCCG
TAGGGTCCGCACGCTTAACGTTCGATGACGATTTGTATTATGAGTTGTGTGTTTTGGTGACCGAAGTTTGTTCGGAGTCC
CGGATGAGATCACAGACATGACGAGGAGTCCCGAAATGGTCGAGAGGTAAAGATTCATATATTGGAAGGTTGTATTCGGA
CATCGAAATTGTTCCGAGTGATTCGGGTATTTTACCGGAGTACCGAGGGGTTACCGGAACCCCCCGGGGGAAATATTGGG
CCTTAGTGGGCCTTAGTGGAGAGAGAGGAGGGCCGCAAGGGGTGGCCATGCGCCCCCCATGGCAGTCCGAATTGGACTAG
GGGAGGGGGAGGCGCCCCCTTTCCCTCTCCCTCTCCCTCTCCTTCCTTTTCCCTCCGATGGAGAAAGGAAAATGGGGGGG
GGGGAGGGTGAATCCTACTAGGACTAGGAGACCTAGTAGGACTCCCCCCCATGGCGCGCCCCTCCTGACCGTCGGCCTCC
TCCTCCCCTCCTTTATATACGGGGGCAGGGGCACCCCAAAGGCACATCAATTGTTCTCTTAGCCGTGTGCGGTGCCCCCT
CCACAGTTTACTCCTTCGGTCATAGCGTCGTAGTGCTTAGGCGAAGCCCTGCGCAGATCACATCACCATCACCGTCACCA
CACCGTCGTGCTGACGAAACTCTCCCACGACCCTCTGCTGGATCAAGAGTTCGAGGGACGTCGTCGAGCTGAACGTGTGC
TGAACACGGAGGTGCCGTACGTTCGGTACTAAGATCAGTTGGATCGTGAAGTCGTTCGACTACATCAACCGCGTTAAACT
AACGCTTCCGCTTTCGGTCTACGAGGGTACGTGGACACAATCTCCCCCTCTTGTCGCTATGCATCTCCTAGATAGATCTT
GCGTGATCGTAGGAATTTTTTTGAAATTGCATGCTACGTTCCCCAACATAGGGCCCATCTAACAAATTCAGAAAATCAAC
CACTAAAAAAAT--AAATTCAGAAAATCTCTAAAGGCCAATGTGGTTTATATGGTAGTAGGTGTGGTGGGAAGTTTAGTC
CCATACTGGTAGTTGGAGAGGAGTTTGACCTAAGGGATTCTCTTCCACATGCTATT---
>SNPs
SSSSSSSSSSSSSSS-------------------------S-S-----------------------------S-------
---------S-----------------------------------S--SSSS--SS------------------------
-----------S---SS----------S---SSS------SSSS--S-----S----SS----SSSS-----------SS
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--S--S----------S-----S-------------S-SSS--------S
---S-------------------------------S-------------------S--------SSSS-----------S
--------S----S-----SS---------------SSSS-SSS-S----------S-----------S------S----
---SSSSS----SS------S----------------------------------S--------S---------------
---S-------------------------------------SSSSSSS--------------S-------------S---
----------------S-----------------------------------------------S---------------
---S--------------S-S----------------------------------------------------S------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
S----S-------------------------------------S--------S-------------------S-------
---------------------------------SSSS----------------------------------S--------
--------------------------------------------------------------------------------
---S------------------SSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------S--------------------------S----------------------------------------
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---------------S-----S--------SSSS---S------------------------------------------
---------------------------------S------------------------------S--------S------
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--------------------------------------------------------------------------------
------------------------------S--S-----------------S--------S-S--------S--------
------------------------S-------------------------------------------------------
---------------------SS--------------------S-----S--------------S---------------
------------------S----------------S--------------------------------------------
------------------------------------------------------------S--S----------------
-------------------------------------------------------------------------------S
--------------------------S---------------------------SSS-----------S-----------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------S--------------S---S-------------S-----------------------------S------
---------S-------------------------------------------------S--------------------
-----S--------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------------S-----------------S-----------S---S-S----S----------SS---------
-------------------------------------------S----S-----------S---S--S-------S----
--------S-----------------------------------------------------S-----------------
--------------------S-------------------------------------------------------S---
--------------------------------------------------------------------------------
---------S----------------------------S-----------------------------------------
----------------------------------------S--------S--------------------------S---
-S------------------------------------------S------------------S----------------
----------------S--------------------------------S-------------------S----------
---------------------------------------S----------------------------------------
------------------S-----S-------------------------------------------------------
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-S--S----S-SSS----------------S------S-------S--------SS----S-------------S-----
------S---------------------S---------------S-S---------SSS
>forward_1126
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------------------------------------------------------------------AGAGCCACTTGGAG
TCTTGC--------------------------------------------------------------------------
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>reverse_2463
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--------------------------------------------------------------CTTCCCGGAAGGCTTCTA
CC------------------------------------------------------------------------------
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>forward_2461
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-----------------------------------------CATCAACGACCTCACCTCCC-------------------
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>reverse_6296
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-------------------------------------------------------GGTAGCTGTGGTGGGAAGTG-----
-----------------------------------------------------------
