>input_sequence_35366
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---------------------------------------------------------------------------ATGCT
GTCATGTTATTGCAGAGCAGGA--GGGGGTCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAA
GGAGCGGGA---GGAGGAGCTGCAGGGGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCGTG
ACGCGCGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACAGG
CAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCACGAGCTCAAGAGCGCCACCCGGAGCTT
CAGCCGTGCACTTATGATCGGTGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCC
GAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGACATTCTCTTTTTTTCCTCATGCATTGCTT
CCAGCTCCACCCAACTCGGCATAAACATGGTGTCAGAGCTCATTCATGGAGGCGATCCGATCATCAACCCGAACAACCAT
CGGTAATCTGGATGGCTGGATCCAGATGATAACACCAATGCTTTGATTCGTCATCCAGGGGCATAAGGAATGGGTGACCG
AGGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGG
ATTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCCGC
TTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACAGCTCGTGGTCTCAAGTACCTGCACGAAGATTCCGAATTCAAGG
TAAGCTTCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTGC----TGAAAGATAAG-----ATCATAGAAGCA
TGACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATTGTCTGCC-ATCTATGAATGTATTCTTCCAGATAATA
TTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAACGCGAAACTGTCGGACTTCGGCTTGGCTAGACT
GGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCAAAAAAGCCCATCTTCTTTGTCCAGCACC
T-------GATGGCACTATCCTCAATTCCATGGCGCAATGCTGACATATTGAATAGCATACTGTAACTTTCAGAAGCAGC
TTTGCAAG--TTCACCCAAGTATGATCAGTTCAGTAGGTACTAGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTT
CCGTACTTGTCAGACAAACCCAAAACTAGGAGTGGTTAAAAGAAA-CTCCACG---TGAATGGATGCTTAGCAGTCAGCA
AGTA---------GATTATTGGCCTGTGAAATAAGAAATGGACAATACCATCATCCTAGATACACAAGCAGAACGAAGGG
TAGGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGAAGACCGATTAGGAAAGCCAGCTAGCCCTGCTGGTT
GGTTGAAATCAGC---TAACTTTTCTGGCTGATTTCCAATTGTAGTATTTTATCACATGTGATGATAAATTTCCGAGTAA
AAGTAGCCTCTGTCTGTACATTAACTCTAGATACCTGACATTTCTTACCTATAAAA-----AGTTAAGTTTCTCTTTTTA
TTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACGGGACGCCTCAGCAGTAAG
AATGACATATGGAGCTATGGAGTAGTTCTCTACGAACTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGG
TGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTTGAGACCATAATGGATCCAAGGCTCG
AAGGGAACTACAACCTGAAATCGGCAGTCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGA
CCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGAT
AAGTCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAG
CTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGA------------------
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>chr1B_1_TraesCS1B01G157700
ACTATGTTACTTGGGAAAACATATACAAAAGTTGCTTTCTGAGAGATCTGTACAGCAAGTACACCATGTACGGCAACCAT
AC---------GTGATTACTCTTTTAGTAGT--TTTCTTCTTTTGAACTTTGATTACTCGTTAAGTTTTACTACCCCACA
ACCCTGATGAAAGTTCTTGTTCCTGCGATTTGTCAGTTGCCATTTCCCTCTCCTCGCCG--CTTATTTCAACACCTGCAC
CCATCACCATACTCGTCTCGCCTCTCGCCATCCAAACCCTCACGTTTCTCTCGCG-----TCCCCTCGTCCCAGCTCCCA
AAGCAAGCGAGC----AGCGCGCGACCAACCAAGCAGAAAGAGACAGCCCGAAGCAGGAGCCGGCCATCCATTGACCTGC
TAACTAGGCAATCCAAT--CCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGG
GAGGCTCAGCTAGGTGGCT-TTTGCCCAGGTGAGCAGGAAACGACCCGCCCCGTGAAGAGAGCTTGGTGTC-----TTTC
AACTTCTATTGGGTTGGGTTTGGACTTTGGAGAACAAGGTTGAGCGGTTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTG
CGGTTTCTGTCTGGCTGATCGTCTCCATGGGTGTATGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAG
ATTGGTGCGTCT-TTGCATTGGTAATTGATTGATCCAGTAGGATCTCATCTT-ATTTGAAAAGTGCATATCCCTTTTGCC
TCTTTTGAAACCCCTTTAGTTTTCTTCTTTTGATGCCTTCAAGGTTTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCCTTCTGGTTG---TAGAATAATGGCTCTTTTCCGCTGCTTTCTGCACCTAGTCTTCTTCACAATCAGTGCTTCCAA
CTTCCAAGATCCGAGAGCTTGCCTTTACCGCAGTCTGAAACTGATTACTATAGTAGCTGAAAGGTTGCGCCTTTGATGCT
GTCATGTTATTGCAGAGCAGGA--GGGGGTCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAA
GGAGCGGGA---GGAGGAGCTGCAGGGGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCGTG
ACGCGCGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACAGG
CAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCACGAGCTCAAGAGCGCCACCCGGAGCTT
CAGCCGTGCACTTATGATCGGTGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCC
GAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGACATTCTCTTTTTTTCCTCATGCATTGCTT
CCAGCTCCACCCAACTCGGCATAAACATGGTGTCAGAGCTCATTCATGGAGGCGATCCGATCATCAACCCGAACAACCAT
CGGTAATCTGGATGGCTGGATCCAGATGATAACACCAATGCTTTGATTCGTCATCCAGGGGCATAAGGAATGGGTGACCG
AGGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGG
ATTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCCGC
TTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACAGCTCGTGGTCTCAAGTACCTGCACGAAGATTCCGAATTCAAGG
TAAGCTTCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTGC----TGAAAGATAAG-----ATCATAGAAGCA
TGACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATTGTCTGCC-ATCTATGAATGTATTCTTCCAGATAATA
TTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAACGCGAAACTGTCGGACTTCGGCTTGGCTAGACT
GGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCAAAAAAGCCCATCTTCTTTGTCCAGCACC
T-------GATGGCACTATCCTCAATTCCATGGCGCAATGCTGACATATTGAATAGCATACTGTAACTTTCAGAAGCAGC
TTTGCAAG--TTCACCCAAGTATGATCAGTTCAGTAGGTACTAGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTT
CCGTACTTGTCAGACAAACCCAAAACTAGGAGTGGTTAAAAGAAA-CTCCACG---TGAATGGATGCTTAGCAGTCAGCA
AGTA---------GATTATTGGCCTGTGAAATAAGAAATGGACAATACCATCATCCTAGATACACAAGCAGAACGAAGGG
TAGGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGAAGACCGATTAGGAAAGCCAGCTAGCCCTGCTGGTT
GGTTGAAATCAGC---TAACTTTTCTGGCTGATTTCCAATTGTAGTATTTTATCACATGTGATGATAAATTTCCGAGTAA
AAGTAGCCTCTGTCTGTACATTAACTCTAGATACCTGACATTTCTTACCTATAAAA-----AGTTAAGTTTCTCTTTTTA
TTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACGGGACGCCTCAGCAGTAAG
AATGACATATGGAGCTATGGAGTAGTTCTCTACGAACTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGG
TGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTTGAGACCATAATGGATCCAAGGCTCG
AAGGGAACTACAACCTGAAATCGGCAGTCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGA
CCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGAT
AAGTCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAG
CTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAACATGGATGAGA
TGTTCCTCTTTATGACTTTGACATCCAGAGATATTTGCAAAAAACAGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTA
CCATACAATTCAGAGAACATGATAACTAAAAACAGGAGATGT-------GGCAAGCCTGATGCTATCATCACTAAATAAT
GGCTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTCGCCACATAGTTCGGCATTACATGTTTTCACAAGAG
CTGGAAAATCAAAACTGAAGCAGTCTTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCACATTTTTGCT
GACTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAA
GATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTT
TCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAATAATAGAATCAATGTGTTATAACTTTTACA
TAATTAAATGGATAATGAGAAGAGGAGGTTATTATAAAACAAGAAGAAA-GGAGAAAATGTGGGGGGAAAAAGGTGGATT
CACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTTTATATTAAACAAAACATTGTTTCTTCAGTAAAGTACCATA
TGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATAGGAAATATAGCATGCTCCGGATGTTTGGCATGAT
AAAAATATATAACTAAGCAACACTAATTTTGGGAACCAAGATT-AAAAAATAAAATAGGAATAAGTACAGTGTGGTTTCA
CCTTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAGCTCAGCACAGGCTACATACGCAGTTCTGGCACATG
ATCCTAGCAATTGGTACATTTTTACAACTGC
>chr1D_2
-CTATGTTACTTCGGAAAACATATACAAAGGTTGCTTTCTGAGAGATCTGTACAGTGAGTACATCATGTACGGCAACCAT
ACGCTCCACTGGTGATTACTCTTTTAGTAGT--TTTCTTCTTGTGAACTTTGATTACTCTTTTAGTTTTACTACTCCACA
ACCATGATGAAAGTAATTGTTCCTGCGATTTGTGAGTTGCCATTTCCCTCTCCTCGCCGTGCTTATTTCAACACCTGCAC
CCATCACT---------------------ATCCAAACCCTCACGTTTCTCTCGCG-----TCCCCTCGTCCCAGCTCCCA
AAGCAAGCAA------------CGACCAACCAAGCAGAAAGAGACAGTCCGAAGCAGGAGCCGGCCATCCATTGACCTAC
TAACTACGCAATCCAAT--CCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGG
GAGGCTCAGCTAGGTGGCT-TT-GCCCAGGTGAGCAGGAAACGACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCATTTC
AACTTCCCTTGGGTTGGTTTTGGACTTTGAAGAA---GGTTGAGCAATTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTG
CGGTTTCTGTCTGCCTGATCGTCTCCATGGGTGTATGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAG
ATTGGTGCGTCTTTTGCATTGGTAATTGATTGATCCAGTAGGATCTCATCTTTATTTGAAAAGTGCCAATCTCTTTTGCC
TCTTCTGAAACCCCTTCAGTTTTCTTCTTTTGACGCCTTCAAGGTT------------------------TCTCTCTCTC
CCTCCTTCTGGTTG---TAGAATAATGGC--------GCTGCTTTCTGCGCCTGGTCTTCTTCCCAATCAGTG-------
CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAATTGATTACTATAGTAGCTGAAAGGCTGCGCCGTTGATGCT
GTCATGTTATTGCAGAGCAGGA--GGG--TCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAA
GGAGCGGGACAAGGAGGAACTGCAGGTGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCATG
ACGCGCGGCGCTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCGGAGATCAGCGTCGAGTCCTTCGGCCGGTACCGG
CAGTTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTT
CAGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCC
GAAGCCTTGATGTTGCTATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGCCATTCTCTTCTTTTCCTCATGCATTGCCT
CCAGCTCCAGCCAACTCAACATAAACATTGTGTCAGAGCTCATCCATGGCGGTCATCCGATCATTGACCCGAACAACCAT
CCGTAATCTGGATGGCTTGATGCAGGTGATAACACCAATACTTTGATTCGTCATCCAGGGACATAAGGAATGGGTGACCG
AGGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGG
ATTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCTGC
TTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTCTCAAGTACCTGCACGAAGATTCTGAATTCAAGG
TAAGCCTCATCACAGGCATGCAGTAACTCATTCAAATGCTATGATTGC----TGAAAGATACTGTAACATCATAGGAGCA
TGACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATCTG-C-ATCTATGAATATGTTCTTCCAGATAATA
TTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAATGCAAAACTGTCGGACTTCGGCTTGGCTAGACT
GGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCAGCCG--AAAGCCCATCTTCTTTGTCCAGCACC
C-------GATGGCACTATTCTGAATTCCATGGCGCAATGCTGACATATTGAACAGCATACTGGGACTTTCAAAGACAGC
TTTGCGAGTTTTCACCTAAGTATGATCGGTTCAGTAGGTACTTGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTT
TCGTACTTGTCAGACAAACCGAAAACCAGGAATGGTTAAAAGAAA-CTCCTCGACATGAATGGATGCTTAGCAGTCAGCA
AGTACTTTTAAAAGATTATTGGCTTGTGAAATAAGAAATTGACAATACCATCATCCTAGATGAACAAGCAGAACAAAGG-
TAGGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGACGACCGGTTAGGAAAGCCAGCTAACCCTGCTGGTT
GGTAAAAATCAGCTAGTAACTTTTCTGGCTGCTTTCCAATTGTAGAATTTGATCACATGTGATGATAAATTTCCAAGTAA
AAGTAGCCTCAGTTTGCAGCTTAACTCTAGATACCTGACATTTGTTACATATAAAAGGTAGAGTAAAATTTCTCTTTTCA
TTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACAGGACGCCTCAGCAGTAAG
AATGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACAGGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGG
TGAGCAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTGGAGACCATAATGGACCCAAGGCTTG
AAGGGAACTACAGCCTGAAGTCGGCAGCCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGA
CCTAAGATGAGTGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGAT
AAGCCATTCAAAAGAACTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCAGATATTAAAG
CTGGAGATGGTAGATGGTTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAATATGGATGAGA
TGTTCCTCGTTATGACTTTAACATCCAGAGATATTAGC-AAAAACAGCAACAGCTGAAATGCCACTTGAGTTGCTGTTTA
CCATACAATTCAGAGAACATGATAGCTAAAAACAGGCGACTTGGCAAA-------CCTAATGCTATCATCACTAA-----
--------------------------------------------------ATAGTTCAGCATTACATGTTTTCACAAGAG
CTGGAAAATGAAAACTGAAGCAGTCCTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCGCATTTTTGCT
GACTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAA
GATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATCTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTT
TCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAAAAATAGAATCAATGTGTTATAACTTTTACA
TAATTAAATTGATAATGAGAAGATGAGGTTATTATAAAACAAGAAAAAA-GGAGAAAATGTGGGGGAAAAAGGC-GGATT
CACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTATATTAAACAAAACATTGTTTCTTTAGTAAAGTACCATA
TGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATATGAAATATAGCGTGCTCCGGATGTTTGGCATGAC
AAAAATATATAACTAAGCAACACTAATTTTGGGAACTAAGATT-AAAAAATAAAATAGGAATAAGTACAGTGTGGTTTCA
CCTTTGAGCGCTATACACAACCAGAGATCTGGTTAACGGGCAAAGCTCAGCACAGGCTACATACGCAGTTCTGGCACATG
ATCCTAGCAATTGGTACATTTTTACAACTGC
>chr1A_4
---ATGTTACTTGGGAAAACATATACAAATGTTGCTTTCTGAGAGATCCGAACAGCAAGTACATCATGTACGG-AACCAT
ACGCTCCACTGGTGATTACTATTTTGGTAGTCTTTTCTTCTTTTGAACTTTGATTACTCTTTTAGTTTTACTACCCCACA
ACCCTGATGAGAGTTCTTGTTCCTGCGA-TTGTCAGTTGCCATTTCCCTCTCCTCGCCGTGCTTATTTCAACACCTGCAC
CCATCACG---------------------ATCCAAACCCTCACGTTTCTCTCGCGTCCCCTCCCCTCGTCCCAGCTCCCA
AAGCAAGCAAGCGAGCAGCGAGCGACCAACCAAACAGAAAGAGACAGCCCGAAGCAGGGGCCGGCCATCCATTGACCTAC
TAACTACGCAATCCAATATCCAAATCCCGTACCCTGAACCAGAAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGG
GAGGCTCAGCTAGGTGGCTTTT-GCCCAGGTGAGCAGGAAACGACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCATTTC
AACTTCTCTTGGGTTGGTTTTGGA----GAAGAA---GGTTGAGCAGTTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTG
CGATTTCTGTCTGGCTGATCGTCTCCATGGGTGTGTGTTCTGGTCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAG
ATTGGTGCGTCTTTTGCATTAGTAATTGATTGATCCAGTAGGATCTCATCTTTATTTGAAAAGTGCCAATCTCTTTTGCC
TCTTCTGAAACCCCGTTAGTTTTCTTCTTTTGACGCCTTCAAGGTT------------------------TCTCTCCCTC
CCTCCTTCTGGTTGTACTAGAATAATGGC--------GCTGCTTTCTGCACCTGGTCTTCTTCACAATCCGTG-------
CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAACTGATTACTATAGTAGCTGAA-GGCTGCACCTTTGATGCT
GTCATGTTATTGCAGAGCAGGAGGGGG--TCAAAGCAGAAGAAGCGCGATGCAGTGCTTCCGGTTCGCGAGCTGGGACAA
GGAGCGGGACAAGGAGGAGCTGCAGGTGCCTGCACGGTCTCAGTCGGCGCGTTCCAACAGCAGCATCTCCACGGACCATG
ACGCACGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCCGAGATCAGCGTCGAGTCCTTTGGCCGGTACCGG
CAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCACCTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTT
CAGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACCGCGGCACCATCCGGAGCACCCTCGAGCCGCGCC
GAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAGGTGACATTCTCTTCTTTTCCGCATGCATTGCTT
CCAGCTCCACCCAACTTAGCATAAACATGGTGTCAGAGCTCATCCATGGCGGTGATCCGATCATCCACCCGAAAAACCAT
CCATAATCTGGATGGCTTGATGCAGATGATAACACCAATGTTTTGATTCGTCATCCAGGGACATAAGGAATGGGTGACCG
AGGTGAACTTTCTTGGGGTGGTGGGTCATCCCAACCTGGTGAAGCTCATCGGCTACTGCGCAGAGGACGACGAGAGGGGG
ATTCAGTTGCTGCTCGTCTACGAATTCATGCCTCACGGAAGCCTAGCTGATCACCTGTCAACAAGATCACCAAAGCCCGC
TTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTCTCAAGTACCTGCACGAAGATTCTGAATTCAAGG
TAAGCATCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTGATTGGTGAAAGATAAG-----ATCATAGAAGCA
TGACCTATTTTGGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATCTG-CCATATATGAATATGTTCTTCCAGATAATA
TTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAACGCAAAACTGTCGGACTTCGGCTTGGCTAGACT
GGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGC------------CCATCTTCATTGTCCAGCACC
TGATGGGTGATGGCACTATTCTCAATTCCATGGCGCAATGCTGACATATTGAATAGCATACTGTGACTTTCAGAGGTAGC
TTTGCAAG--TTCACCCAAGTATGATCGGTTCAGTAGGTACTTGGTAGTCAGTAGCAAGAATAGTTCATATTGTGGCCTT
CCGTACTTGTCAGACAAACCCAAAACCAGGAGTGGTTAAAAGAAAACTCCTCCACGTGAATGGATGCTTAGCAGTCAGCA
AGTACTTCCAAAAGATTATTGGCCTGTGAAATAAGAAATGGACAATACCATCATCCTAGATACACAAGCAGAACAAAGG-
TAGGCAGTTAGGCACTTCCGGGTTAGTTAACATGCTAGTGTAGGAAGACCGGTTAGGAAAGTCAGCTAACCCTGCTGGTT
GGTTAAAATCAAC---TAACTTTTCTGGCTGATTTCCAATTGTAGCATTTTATCACATGTGATGACAAATTTGCAAGTAA
AAGTAGCCTCTGTTTGCAGCTTAACTCT-GATACCTGACATTTGTTACCTATAAAA-----AGTTAAATTTCTCTTTTCA
TTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTCCTGAGTATATCCATACAGGACGCCTCAGCAGTAAG
AATGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACAGGCCGGAGGCCTCTGGACCGGAACAGACCGAGGGG
TGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACACCAAGAAGTTTGAAACCATAATGGATCCAAGGCTCG
AAGGGAACTACAGCATGAAATCGGCAGTCAGGATTGCCTCGCTGGCAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGA
CCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGATAGCAGTGACCTTGGAACACCAGAGCATCCCCTGAT
AAGCCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGGCCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAG
CTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGCTTGTGAGAACACAATGACTCAAAATATGGATGAGA
TGTTCCTCTTTATGACTTTGACATCCAGAGATATTAGC-AAAAACAGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTA
CCATACAATTCAGAGAACATGATAACTAAAAACAGGAGATTTGGCAAGCGGCAAGCCTAATGCTATCATCACTAAATAAT
GGCTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTTGCCACATAGTTCGGCATTACATGTTTTCACAAGAG
CTGGAAAATCAAAACTGAAGAAGTCCTTTTTGAAGTAGAAATATTGGTGTACAGTTTAACATGGAATTCGCATTTTTGCT
GACTGAATTTTGAATTGTTTCTAGTGCCAAATAAGAATTTTAAGGAGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAA
GATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTTCTGCACTGACACAGCTGATATGTAAAGTTCCCTTT
TCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCCATAAAAAATAGAATTAATGTGTTCTAACTTTTACA
AAATTAAATTGATAATGTGAAGA-GAGGTTATTATAAAACAAGAAAAAAAGGAGAAAATGTGGGG--AAAAAGGTGGATT
CACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTGTATTAAACAAAACATTGTTTCTTTAGTAAAGTACCATA
TGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCATATGAAATATAGCATGCTCCGGATGTTTGGCCTGAT
AGAAATATATAACTAAGCAACACGAATTTTGGGAACCAAGATTAAAAAAATAAAATAGGAATAAGTGCAGTGTGGTTTCA
CCTTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAGCTCAGCACAGGCTACATACACAGTTCTGGCACATG
ATCCTAGCAATTGGTACATTTCTACAACTGC
>SNPs
S----------------------------S---------------------------------S----------------
-----------------------------------------------------------S--S-----------------
--------------------------------------------------------------------------------
-------SSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
--------S-----------S---------------------------------------------------------S-
------S-------------------------------------------------------------------------
----------------------S-------------------------S----------------S--------------
-------S---------S-----------S----SSS--------S----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SS---S--------
----S----------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSS----------
S----------------------------SSSSSSSS----------------S-------------------SSSSSSS
-------------------------------S--------------------------------S---------------
---------------------------SS---------------------------------------------------
--------------------------S--------------------------------------------------S--
-----------------------------------------------------------------------------S--
-----------------------------------------------------S--------------------------
------------S--------S----------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------S-------------------------S-----S--S------------S--------------
-S---------------S---S--------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------------------------------S----------
-----S--------------------------------------------------------------------------
-------------------------------------------SS----S------------S-S---------------
--------------------------------------------------S-----------------------------
---------------------------------------------------SSS--------------------------
-------------------S--------------------------------------------S---------S-----
---------------------------S--------------S-------------------------------------
--------------------------S-----------------------S-----------------------------
--------------------------------------------------------------------------S----S
---------------------------------------------------S----------------S-----------
----S----------------------------------------S----------------------------S-----
-------------S--S-SS-----------------------S-----------------------S----------S-
-------------------------------------------------------------S------------------
-----------------------S-----------S--------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------------------S--S-----------------------------------------
----------------------------------------S-----------------S---------------------
--------------------------------------------S-----------------------------------
-------------------------S-------------------------------------------S----------
--------------------------------------------------------------------------------
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--------------------------------------------------S-----------------------------
---------S-------------S---------------------S--------------------S-------------
---------------------------------------S-------------------------S--------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>forward_264
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----CACCATACTCGTCTCGCCTC--------------------------------------------------------
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>reverse_1570
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-------------------------------------------------AGGCGATCCGATCATCAACC-----------
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>forward_1334
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCCGCATCTTCACCTTCCAC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2260
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCTCAATTCCATGGCGCAAT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_2212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGGTATGTAACGAGCAGCCA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_4127
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GGAAATATAGCATGCTCCGGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
