>input_sequence_35347
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----------------------------------------------ATGGCTTACTCCCCCAGCACCCCGTCCCCCGGCG
CCGCCTTCGCCGTCGGGTCCTTCCCAGGAGCAGTCTCCGAGGACAGCATGTTCCCCAGACCCCCTCCGCCAACGCCTAAA
GGCCACATGCCGCTCCCCTCCACCGCCGACGCCACGCTCACTGCTCTGTTCGACCGCATGATCCTCTCCCCGCCGGTTCC
AGTCCTCCGCCTAGGCGCCCCCTCTCGCCTCAGAATCCGCTCGTCGGCGACTCCGCTTGTCTTGCTCGACTCCCCTGACT
TGGCCTCCCTTCGCGCCGCCTGCGACGTGGGCTACTTCCACCTCGTCGGCCATGGCATCCCTTCCCAGCTGCCATCCTCT
GCACTCGCTGAGCTGTCTCGCGTCGACGCGTCCGCTATGCGCGCGTCCACTCTTTCCACGCTCGGGTTCTCCGCGGAGGG
TGAGGAAATGGACGCCGGCGTTGAACCCGTCATGGTGTTCGACGTCGACGAGCTGGGGATGGACGCGCTCCCGGCGGCGC
TGGAGTACGCGCGGCTGATGAGGGAGGTGGGTATGCAGGTGGTGGGGCTTTTCTCTGGGGCTGGTGGGGTGGGTTTCGGG
GAGAAGCCGTTCGCGGAGGAGGGGGGAAGGAAGGCGAGGTGCCTGGTGTGGGTCTCCAAGGTCGGCTCGGGCGAGCCGGC
GGTGCCTCCGGCCGCCGGCGACGCAAAGGCGTATCCGTACGTCGTGGGACTCCATTGCGAGTGGGAGCAGGAAGCCGGTG
CATCGAGCTGGGTGATGGACGACAGCGGCGAGTGGAAGGCCGTAGGCGCGAGCGATGGTGCACTCCTGGTCACCATCGGT
GACATTGCTCAGGTATCGCTACAACACCCATCTCTATTGACTTAGTTTTTATTCCCTGGGAAGTGCTTTTGTCTGATCAT
GATAGCATTAGATTATATATAT--------------GTGTAGTGTGTACACAGTCGTGCAAA-CGTTCATTTCATCTACA
--ATATTTAGCAAAGGATAAGCACAAGTACATTGCACAACTATTTCATTCATAAGGGTATGTTTGAATTGAGCGCCCTAC
CAAAAGTTTCGCATATAACCAAACTAAAGGCATGATCAAAAAAATTGACAAGTATATAGCTTATTTGATTGTAACTCTAG
AACCTGCTAAAATATTGG-AAAAATAGCTGGTCTCCATTTGGTTTGCAGCAAATGACCTACATACATGCATATTCGCGCG
CAAATTGCTCGCCGAATTTTTGACGAATGGTTCA-TCCGCCGTCATTTTTCCCGCGCGGTGGCCAAAATTACGTGTGTGG
AGCCATGCAGCTGTCGGCTGCCGAGCGAAAATTGGCGCGCGGATTTTACAACTTGCATTTTGCCATAATAGTAGATATGC
ATTTATTTCATTTTGCTTGATACAATGCACATGCCAGCCATTTTATTGTTATTAATGTGATTAAATACT------AATAA
AAATTATAATATCA---ATACTTATTGACTTACCAAAAAAACATGATTTAATTTGGTAAGCCAATAAGAGATTGGTCAGT
------TGAGCCGGTTCTCAAGAAA-AAACCAGTAAAAAATCAACAAAACCGAAAACGAAGGATGTGGGGTGGGGGTGCA
ATTACATGTTTTTTGAATAGGAGGGATAGGAGAGAAGAGATTGTTCTACTGCCATCAAATTCTAAGTAGTCTATGCAT--
-----------------------------------CACTACTCAACTTGAACCGGGTCAGCTAATTAGGCCGCGTGTCTG
CATCACTGCATGATTGGTCGCCACTGGGTTGAAAACCACATAAATAAAACGAGACAAAGTCCCAAATATCTCGTCTTTTG
AAAACACAAAGCGATCGTC----ATATTTTTTTGCTGCAAAAGTACCTTTCTTTTACCTTTTTTTTATCAGTCTTTATGC
AGTAGCAGTGACACTCATTTTGATGCCGTGGTTCTTTTGTGATGCGTTCTAGGTGTGGAGCAATGGCAAGCTGAAGAAAG
TGAGAGGCATGGCTCGCCCAACTCCTGCCCCCAGCAGCGAGGGTGAAGAGGGCGGGGAGCCAGCCCGCCTGTCCATCACC
GTGCTGATCACACTGCCCCTGGACAGCGTCGTCTCGCCGCTGCTGCCGCTCTCTGGTGCCGGCAAAGACGGCGGCGACGT
GGAGGAGAAGGAGAAGGAGGAGGTCTCTGAAGACGGTGATGAGGATGGATGCAGCTTTCTCCCCATCTCCCTGCAGAGCT
ACGCGTGGGGGCTGTTCCATGATCAGCTTGAGTCCAAGGATCCGCTTGCCCCGTACCGCATATGA---------------
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>chr3B_1_TraesCS3B01G382800
CGCATAATATTCTAAAGAGATGTACCACACTTGTGTGGGTTGACAATAATATGCACCTACACATTTCCATGATCCAAGAG
CCATGACCAAAAAA-GGTGTATAAAGTGAGA-AAAGGGTGACGCTGCACTCTGTTCGGCACTAGTTTAACCGAATCGACA
AAGTGGCGTGTCGTGCCGGAATGGCACGTGTCC------TCGAGCTCGAGCTCGAAGGTCAATGTGTCGAACGACTTGCC
GTGATCAGGCTCGACCAGCAGAAAATCCGTACTATAGATGTGAGATGTCTCGTGCTCTT-GCCATCCA------------
--------------------ATGGACGCAACGATACCGATCGATGGTTCAGCTCCAGCTTCGGTTGGCCTGTGAACGAAA
GGCTCTGTTGTTTCTAGAAGCCTACAGCTACACGTGTGGGCTCTCGACAGCTGAGGCCAACGATTTGCTTTCTGCAGGAG
TTATGCGAAACGACTCCTTGGCGATCGATCGCCGGAGCGATCGATTCAGATCGCGCTCGTCGCTCCGCCTATTTCCTTTC
CCTTTCTAGCCTTTTTCCTTTTCTGGATTATGACTTTCTTATCGAGGCCATCGCGCATGTACTCT--GGAAATTTGCAGT
GATGCGGAGCCGCACGTGATATTTTTCTTC--CCAAATAAA----------ATCTTTTTCTTTTGGCAAGTCAGCAAGCG
CTGATATCAAATCGAATCTCACAGAATATCTTGCGAGATCTCCCCATAA--ATATTCATTATGGCCTCCATTGCGGCGTG
AAAAAAAAA--CCCTAA----------TTTCGAGGGAGTGGTTCTGCAGGCCTTTG--TTCCGGCCTGCTT---ACCGGT
CCAGGTACGACCCGTCCCCCTCAACTGGCCCACCACACGCTCAGCGACAGGGCCCAAGCGAGGACCCGCGGCGGCTATAA
AAG----------------------------------------------------------------------------T
CGCCTGCTCGCACACGCTCAGAGCACCTGCCCGCCCAGCAACACTACACCGGT---------CTCCCACCCACACCCATC
CCTGTCCGCCGCTCCGC----CCGTCT---CCGCCACCCCACCTCCATGGCTTACTCCCCCAGCACCCCGTCCCCCGGCG
CCGCCTTCGCCGTCGGGTCCTTCCCAGGAGCAGTCTCCGAGGACAGCATGTTCCCCAGACCCCCTCCGCCAACGCCTAAA
GGCCACATGCCGCTCCCCTCCACCGCCGACGCCACGCTCACTGCTCTGTTCGACCGCATGATCCTCTCCCCGCCGGTTCC
AGTCCTCCGCCTAGGCGCCCCCTCTCGCCTCAGAATCCGCTCGTCGGCGACTCCGCTTGTCTTGCTCGACTCCCCTGACT
TGGCCTCCCTTCGCGCCGCCTGCGACGTGGGCTACTTCCACCTCGTCGGCCATGGCATCCCTTCCCAGCTGCCATCCTCT
GCACTCGCTGAGCTGTCTCGCGTCGACGCGTCCGCTATGCGCGCGTCCACTCTTTCCACGCTCGGGTTCTCCGCGGAGGG
TGAGGAAATGGACGCCGGCGTTGAACCCGTCATGGTGTTCGACGTCGACGAGCTGGGGATGGACGCGCTCCCGGCGGCGC
TGGAGTACGCGCGGCTGATGAGGGAGGTGGGTATGCAGGTGGTGGGGCTTTTCTCTGGGGCTGGTGGGGTGGGTTTCGGG
GAGAAGCCGTTCGCGGAGGAGGGGGGAAGGAAGGCGAGGTGCCTGGTGTGGGTCTCCAAGGTCGGCTCGGGCGAGCCGGC
GGTGCCTCCGGCCGCCGGCGACGCAAAGGCGTATCCGTACGTCGTGGGACTCCATTGCGAGTGGGAGCAGGAAGCCGGTG
CATCGAGCTGGGTGATGGACGACAGCGGCGAGTGGAAGGCCGTAGGCGCGAGCGATGGTGCACTCCTGGTCACCATCGGT
GACATTGCTCAGGTATCGCTACAACACCCATCTCTATTGACTTAGTTTTTATTCCCTGGGAAGTGCTTTTGTCTGATCAT
GATAGCATTAGATTATATATAT--------------GTGTAGTGTGTACACAGTCGTGCAAA-CGTTCATTTCATCTACA
--ATATTTAGCAAAGGATAAGCACAAGTACATTGCACAACTATTTCATTCATAAGGGTATGTTTGAATTGAGCGCCCTAC
CAAAAGTTTCGCATATAACCAAACTAAAGGCATGATCAAAAAAATTGACAAGTATATAGCTTATTTGATTGTAACTCTAG
AACCTGCTAAAATATTGG-AAAAATAGCTGGTCTCCATTTGGTTTGCAGCAAATGACCTACATACATGCATATTCGCGCG
CAAATTGCTCGCCGAATTTTTGACGAATGGTTCA-TCCGCCGTCATTTTTCCCGCGCGGTGGCCAAAATTACGTGTGTGG
AGCCATGCAGCTGTCGGCTGCCGAGCGAAAATTGGCGCGCGGATTTTACAACTTGCATTTTGCCATAATAGTAGATATGC
ATTTATTTCATTTTGCTTGATACAATGCACATGCCAGCCATTTTATTGTTATTAATGTGATTAAATACT------AATAA
AAATTATAATATCA---ATACTTATTGACTTACCAAAAAAACATGATTTAATTTGGTAAGCCAATAAGAGATTGGTCAGT
------TGAGCCGGTTCTCAAGAAA-AAACCAGTAAAAAATCAACAAAACCGAAAACGAAGGATGTGGGGTGGGGGTGCA
ATTACATGTTTTTTGAATAGGAGGGATAGGAGAGAAGAGATTGTTCTACTGCCATCAAATTCTAAGTAGTCTATGCAT--
-----------------------------------CACTACTCAACTTGAACCGGGTCAGCTAATTAGGCCGCGTGTCTG
CATCACTGCATGATTGGTCGCCACTGGGTTGAAAACCACATAAATAAAACGAGACAAAGTCCCAAATATCTCGTCTTTTG
AAAACACAAAGCGATCGTC----ATATTTTTTTGCTGCAAAAGTACCTTTCTTTTACCTTTTTTTTATCAGTCTTTATGC
AGTAGCAGTGACACTCATTTTGATGCCGTGGTTCTTTTGTGATGCGTTCTAGGTGTGGAGCAATGGCAAGCTGAAGAAAG
TGAGAGGCATGGCTCGCCCAACTCCTGCCCCCAGCAGCGAGGGTGAAGAGGGCGGGGAGCCAGCCCGCCTGTCCATCACC
GTGCTGATCACACTGCCCCTGGACAGCGTCGTCTCGCCGCTGCTGCCGCTCTCTGGTGCCGGCAAAGACGGCGGCGACGT
GGAGGAGAAGGAGAAGGAGGAGGTCTCTGAAGACGGTGATGAGGATGGATGCAGCTTTCTCCCCATCTCCCTGCAGAGCT
ACGCGTGGGGGCTGTTCCATGATCAGCTTGAGTCCAAGGATCCGCTTGCCCCGTACCGCATATGATTAAGTTCGTTCGTG
ATGGCTCTCTAGCGTTGGATTTTTGTTAGACATGTTCGATTCGTTATAGCTGGACCACAGATGTCATGTGGTCGTTCTCT
AGTGACTTTGTTTGCTGCCTTGCTGGTGCATGCTGCCGTTGGCTTATATCTCTAGAC---TTGAGTTGGTCAGAACGACT
TTGGGTAAACCGTTTATTATAT---TATTATCATTATCAAATGAAATATAGTTATTGTTTGTTTTTATCAAATATAAGTA
TTGAGCAAGTGAGAAGATTGTTTTCCTTATGTTTGCTGGCAAGTCAACCATGTCTGTAGATGGAATTGGAGGCACTATTT
CATCTAAAAATGGGAGCGTCTAATTTTATTTTATTTTTGACACCAAAAACAGTAGGCCTC--TCC--TACTGTGCTGCAT
TCAAACTTATAGAAGAGTTGCGACAAGCCTTGGAAGCAGAACAGAAAGCTACAGGGAATTGACAATAGATGAAATATAAA
GAGGATGCTTTTGAGCAAATAATCTCCCTTAGTTTTTTTT----TCCTGCCACAAGGCTCTAATACCCTTAAATTGAGAT
TATTATGCTCCAATCTCCAAGAATAAACATCGACAGAAAGTGACCTTGGTTTTCTCAATTATAGAAATCCGCAAGGAATT
CGGAGACCATTGGATATTAAATTTAGACCAACAATTGTTGTTGGATGCAAATAAAAGATTAAATGCTCGATGATCTCTTC
GAGAGCAATGCAATTAATAGCATACCTA-GTATAATATAAAAAGATCCGAAAACG-AGATCCAACTAATCTTAGCCATCA
ATCCCTGTCAATCAACGACCTGGATTGCTCCAATATTGAGCACATGTTTAGCGCACGTTTAATAGCATACCTAATATAAA
TGTTTGCATTAATCACCTACTTGGCATTACACGTACTAACCACA--------------CCGACTATGTAGTTGGAATAGC
CTCCTGGATTCCTTCTGCCTATCCTCATTGACGATGTAAGCATTATTTATGACTT
>chr5D_3
--CACAATATTCTAAATAGATGTACCACACT--TGTGGGTTGACAATAATATGCAC-TACACATTTCCATGATCCAAGAG
CCATGACCAAAAAA-GGTGTATAAAGTGAGA-AAAGCGTGACGCTGCACTCTATTCGGCACTAGTTTAACCGGGTTGACA
AAGTGTCGTGTCGTGCCGGAATGGCACGTGTCCTCG------------AGCTCGAAGGTCAATGTGT-------------
------------GATCAGAAGAAAATCCGTGCTATAGATGTGAGATGTCTCGTGCTCTTTGCCATCCAACGGAAGACTCG
AGTCGTTCTCGGTTTGGCTGATGGACGCAACGATACCGATCGATGGTTCAGCTCCAGCGTCGCGTTGTGAACAA---AAA
GGCTCTGTTGTTTCTAGAAGCCTACAGCTACACGTGTGGGCTCTCGACAGCTGAGGCCAACGATTTGCTTTCTGCAGGAG
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---------------------------TTATTACTTTCTTATCGAGGCCATCGCGCACGTACTCAAGG--AATTTGCACT
GATGCGGAGCCGCACGTGATTTTTTTCTTC--CCAAATAAAATAACCTAAAATCCTTTTCTTTTGGCAAGTCAGCAAGCG
CTGATATCAAATCAAATCTCACAGAATATCTTGCGAGATCTCCC-ATAA--ATATTCATTATGGCCTCCATTGCAGCGTG
GAAAAAAA------------CTCACTCTTTCCAGGGAGCGGTTCTGCAGGCCTTTG--TTCCGGCCTGCTT---ATCGGT
CCAGGTACGACCGGTCCCCCTCAGCTGGCCCACCACACGCTCAGCGCCAGGGCCCAAGCGAGGACCCGCGGCGGCTATAA
AAC----------------------------------------------------------------------------T
CGCCTGCTCGCACACGCTCAGAGCACCTGCCCGCCAAGCAACACTACACCGGT---------CTCCCACCCACACCCATC
CCTGTCCGCCGCTCCGGCGGGCCGTCT---CCGCCACCCCACCTTCATGGCTT---------------------------
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----------------------------------TTCCGCCGTCATTTTTCCCGCATGTTGGTAAAAATTACGTG--TGG
CACCATGCAGCTGTCGGCTGGCGAGCGAAAATTGGCGCGCGGATTTTACAACTTGCATTTTGCCATAATAGTAGATATGC
ATTTATTTCATTTTGCTTGATACAATGCACATGCCAGCCATTTCATTGTTATTAATGTGATTAAATACT------AAAAA
TACAA---TATTGGTATATACTTATTGACTTACCAAAAAAACATGATTTA---------GCCAATAAGAGGTGGGTCAGT
------TCAGCTGGTTCTCAAGGAAAAAACCAGTAATAATCAACAAAACCAAAAAACAAAGGATGT--------------
----------------------GGGATAGGAGAGAAGAGATTGTTCTACTGCCATCAAATTCTAAGTCTTTTTTTTAG--
TTTAAAAAAAAA--CTAAGT-CTTTTTTTGCATCACTCTACTCAACCTGTACCGGGTCAGCTAATTAGGCCGCGTGTCTG
CATAACTGCATGATTGGTCGACACTGGGTTGAAAACCACATAAC-AAAAAGAGACAAAGTCACAGAGACCTCGTCTTTTG
AATACAAAGAGTGATCATCGTGTGTATATTTTTGCTGAAAAGTGAC--------------TTTTTAATCAGTCTTTACAC
AGTAGCAGTAACACCCCTTTTGATGCCGTGCTTCTTTTGTGATGTGTTCTAGGTGTGGAGCAATGGCAAGCTGAAGAAAG
TGAGAGGCATGGCTCGCCCCACTCCTGCCCCCAGCAGCGACGGTGAAGAGGGCGGGGAGCCAGCCCGCCTGTCCATCACC
GTGCTGATCACACTGCCCCTGGACAGCATCGTCTCGCCGCTGCTGCCGCTCTCTGGTGCCGGCGAAGAGGGCGGCGACGT
GGATAAGGAGGAGAAGGAGGAGGTCTCTGAAGACGGTGATGAGGATGGATGCAGCTTTCGCCCCTTCTCACTGGAGGGCT
ACGCGTGGGGGGTGTACCATGAGGGGCTTCAGTCCAAGGATCCGCTAGCCCCGTACCGCATATGATTAAGCTCGTTCGTC
ATGGCTCTCTAGCGTTGGATTTTTGTTAGACATGTTCGATTCATTATAGCTGGACCACAGATGACTTGTGGTTGTTC---
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>chr3A_60
-----------------------------------------------------------CACATTTCCATGATCCAAGAG
CCATGACCAAAAAAAGGTCCATAAAGTGAGAAAAAGCGTGACGCTGCACTCTATTCAGCAGTAGTTTAACCGGATCGACA
AAGTGGCGTGTCGTGCCGGAATGGCACGTGTCCTCGAGCTCGAGCTCGAGCTCGAAGGTCAATGCGTCGAACGACTTGCC
CTGATCAGGCTCGATCAGAAGGAAATCCGTGCTACAGATGTGAGATGTCTCGTGCTCTC-GCCATCCAATGCATGACTCG
AGTCGTTCTCGGTTTGGGTGATGGACGCAACGACACCGACCGATGGTTCAGCTCCAGCTTCGCGTTGTGAACAA----AA
GGCTCTGCTGTTTCCAGAAGCCTACAGCTGCACGTGTGGGCTCTCCACAGCTGAGGCCAACGATTTGCTTTCTGTAGCT-
--------------------------------------------------------------------------------
--------------------------ATTATGACTTTCTTACCGGGGCCATCGCGCAAGTATACTCAGGAAATTTGCAGT
GATGCGGAGCCGCACGTGATAATTTTCTTCTTCCAAATAAAAT-----AAAATCTTTTTCTTTTGGCAAGTCAGCAAGCG
CTGATATCAAATCAAATCTCCCAGAAGATCCTGCGAGATCTTTC-ATAAATATATTCATTATGGCCTCCATTGCAGCGCC
AAAAAAAAA--CCCTAACAGCTCACTGTTTCGAGGGAGTGGTTCTGCGGGCCTTTGTCTTCCGGCCTGCTT---ACCGGT
CCAGGTACGACCCGTCCCCCTCAGCTGGCCCACCACACGCCCAGCGACAGGGCCCAACCGAGGACCCGCGGCGGCTATAA
AAC----------------------------------------------------------------------------C
CGCCTGCTCGCACACCCTCAGAGCACCTGCTCGCCCAGCAACACCTGCAGTCCTGCACCAGCCTCCCACCCACACCCATC
CCTGTCCGCCGCTCCGC----CCGTCTCCGCCACCCCACCACCTCCATGGCTTACTCCCCCTCCACCCCCTCCCCCGGCG
CCGCCTTCGCCGTCGGGTCCTTCCCAGGAGCAATCTCCGAGGACAGCGTGTTCCCCAGACCCCCTCCGCCAACGCCTAAA
GGCCACATGCCGCTCCCCTTCATCGCCGACGCCGAGCTCAATGCTCTGTTCGACCGCATGGTCCTCTCCCCGCCGGTTCC
AGTCCTCCGCCTAGGCGCCCCCTCTCGCCTCAACATCCGCTCGTCGGCGACTCCGCTGGTCTCGCTCGACTCCCCTGACT
TGGCCTCCCTTCGCGCCGCCGGCGACGTGGGCTACTTCCATCTCGTCGGCCATGGCATCCCTCCCCAGCTGCCATCCTCT
GCACTCGCCGAGCTGTCTCGCGTCGACGCGTCCGCTATGCGCGCGTCCATCCTTTCCACGCTCGGGTTCTCCGCGGAGAA
TCAGGGAGTGGACGCCGGCGTCGAACCCGTCATGGTGTTCGACGTCGACGAGCTGGGGATGGACGCGCTCTCGGCGGCGC
TGGAGTACGCGCGGCTGATGAGGGAGGTGGGTATGCAGGTGGTGGGGCTTTTCTCTGGGTCTGGTGGGGTGGGTTTCGGG
GAGAATCCGTTCGCGGAGGAGGGGGGAAGGAAGGCGAGGTGCCTGGTGTGGGTCTCCAAGGTCGGCTCGGGCGAGCCGGC
GGTGCCTCCGGCCGCCGGCGACGCAAAGGCGTATCCGTACGTCTTGGGACTCCATTGCGAGTGGGAGCAGGGAGCCGGTG
CGTCGAGCTGGGTGATGGACGACAGCGGCGAGTGGAGGGCCGTAGGCGCCAGCGAGGGTGCACTCCTGGTCACCATCGGT
GACATTGCTCAGGTATCGCTGCAACACCCATCTCTATTGACTTTGTTTTTATTCCCTGGGAAGTGCTTTTGTCTGATCAT
GATAGCATTAGATTATTTATACAGATGTGTAGTGTAGTGTAGTGTGTATACAGTCGTGCAAATCGTTCATTTCATCTACA
--ATATTTAGCAAAGGATAAGCACAAGTGCATTGCACAACTATTTCATTCATAAGGTTATGCTTGCATTGAGCGCCCTAC
CAAAAGTTTAGCATA--ACCAAACAAAAGGCATGATCAAAATT-TTGACAAGTACATAGCTTGTTTGATTGTAACTCTAG
AACCTGCTAAAATATTGGGAAAAAAAGCTGGTCTCCATTTGGTTTGCAGCAAATAACCAACATACATGCATATTGGCGCG
CAATTTGGTCGCCGAATTTTTTGGTGAATGCTTTTTCCGCCGTCATTTTCCCCGCGCGTTGGTAAAAATTACGTG--TGG
CACCATGCAACTGTCGGCTGGCGAGCGAAAATTGGCGCGCGGATTCTACAACTTGCATTTTGCCATAATAGTAGATATGC
ATTTATTTCATTTTGCTTGATACAATGCACATGCCAGCCATTTTATTGTTATTAATGTGATTAATTAAATACTAAAAAAA
TACAATATTATTAGTATATACTTATTGACTTACCAGAAAAACATGATTTA---------GCCAATAAGAGGTGGGTCAGT
ACTAGTTCAGCCGGTTCTCAAGG-AAAAACCAGTAAAAATCAACAAAACCAA-AAACGAAGGATGT--------------
----------------------GGGATAGGAGAGAAGAGATTGTTCTACTGCCATCAAATTCTAAGTCTTTTTTTTTAGT
TTCAAAAAGAAT--CTAAGTCCTTTTTTTGCATCACTCTACTCAACCTGAACCAGGTCAGCTAATTAGGCCGCGTGTCTG
CATCACAGCATGATT-----------GGTTGAAAACCACATAAC-AGAAAGAGACAAAGTCACAAAGACCACGTCTTTTG
AAAACAAAGAGGGGTCATCATGTATATATTTTTGCTGCAAAAGTACCT-----------TTTTTTTATCAGTCTTTACGC
AGTAGCAGTGACACTCATTTTGATGCCGTGGTTCTTTTGTGATGCGTTCTAGGTGTGGAGCAATGGCAAGCTGAAGAAAG
TGAGAGGCATGGCTCGCCCCACTCCTGCCCCCGGCAGCGACGGTGAAGAGGGCGGGGAGCCAGCCCGCCTGTCCATCACC
GTGCTGATCACACTGCCCCTGGACAGCGTCGTCTCGCCGCTGCTGCCGCTCTCTGGTGCCGGTGAAGACGGCGGCGACGT
GGAGAAGGAGGAGAAGGAGGAGGTCTCTGAAGACGGTGATGAGGATGGAGGCAGCTTTCGCCCCTTCTCCCTGGAGAGCT
ACGCGTGGGGGCTGTACCATGATCAGCTTGAGTCCAAGGATCCGCTTGCCCCGTACCGCATATGATTAAGCTCGTTCGTC
ATTGCTCTCTAGCGTTGGATTTTTGCTAGACATGTTCGATTCGTTATAGCTGGACCACAGATGTCATGTGGTCGTTCTCT
AGTTCTTCGT---------TTGCTGGTGCACGCTGCCGTTGAC-----------------TTGAGTTGGTCAGAACGACT
TTGGGTAAACCATTTATTATATTATTATTATCATTATCAAATAAAATATAGTTATTGTTTGTTTTCATCAAATATAAGTA
TTGAGCAAGTGAGAAGATTGTTTTCCTTATGTTTGTTGGCAAATCAACTCTGTCTCTAGATGGAATTGGAGGC---ATTT
CATCTAAAAATGGGATTGTCTTATTTTATTTTGTTTTTGACACTAAAAGCAGTAGGAGAGGATCT--TACTGTGATGCAT
TCAAACATATAGAAGAGTCGCGACAAGCCTTAGAAGCAGAATAG-AAGCTACACGGAGTTGACAATAGACGAAATATAAA
GAGGATGCTTTTGAGCAAATCTGCCTTAG----TTTTTTT----TCCTGTCACAAGGTTCTAATACCCTTAAGTTGAGAT
TGTTATGCTCCAATCTCCAAGAATAAACGT-GACAGAAAGTGACCTTGGTTTTCTCAATTATAGAAATCCGCAAGGTATT
CGGAGACCATTGGATATTAAATTTAGACCAACAGTTGTTGCTGGATGCAAATAAAAGATTAAATGCTCGATGATCTGTTC
GATAGCAATGTAATTAATAGCATACCTA-ATATAATATAAAAAAAATCCAAAAAGAAGATCCAACTAATCTCAGCCATCA
ATCCCTGTCAATCAATGACCTGAATTGCTCCAATATTGAGCACATGTTTAGCGCACATTAAATAGCATACCTAATATAAA
TGTTTGCATTAATCACCTACTTGACATTGCACGTACTAACCATG--------------CCGACTATGTGGTTGGAATAGC
CTCCTGGCTTCCTTCTGCCTATCCTCATTGACGATGTAAGCATTATTTACGACTT
>chr3D_64
---------------------------------------------------------------TTTCCATGATCCAAGAG
CCATGACCAGAAAA-GGTGTGTAAAGTGAGA-AAAGCGTGACGCTGCACTCTATTCGGCACTAGTTTAACCGAATCGACA
AAGTGGCGTGTAGTGCCGGAATGGCACGTGTC------CTCGAGCTCGAGCTCGAAGGTCAATGTGTCGAACGACTTGCC
GTGATCAGACTCGATCAGAAGAAAATCCGTGCCACAGATGTGAGATGTCTCGTGCTCTTTGCCATCCAACGGAAGACTCG
AGTCGTTCTCGGTTTGTCTGATGGACGCAACGATACCGATCGATGGTTCAGCTCCAGCTTCGCGTTGTGAACAA----AA
GGCTCTGTTGTTTCTAGAAGCCTGCAGCTACACGTGTGGGCTCTCGCCAGCTGAGGCCAACGATTTGCTTTCTGCAGCT-
--------------------------------------------------------------------------------
--------------------------ATTATGACTTTCTTATCGAGGCCGTCGCGCACGTACTCG--GGAAATTTGCACT
GATGCGGAGCCGCACGTGATATTTTTCTTC--CCAAATAAAAT-----AAAATCTTTTTCTTTTGGCAAGTCAGCAAGCG
CTGATATCAAATCAAATCTCACAGAAGATCCTGCGAGATCTCCC-ATAAATATATTCATTATGGCCTCCATTGCTGCGTG
AAAAAAAAAAACCCTAACAGCTCACTGTGTCGAGGGAGTGGTTCTGCAGGCCTTTGT--TCCGGCCTGCTTACCACCGGT
CCAGGTACGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CGCCTGCTCGCACACGCTCAGAGCACCTGCCCGCCCAACAACACCTGCAGTCCTGCACCAGCCTCCCACCCACACCCATC
CCTGTCCGCCGCTCCGGCCGTC--TCT---CCGCCACCCCACCTCCATGGCTTACTCCCCCTCCACCCCCTCCCCCGGCG
CCGCCTTCGCCGTCGGGTCCTTCCCAGGAGCAATCTCCGAGGACAGCGTGTTCCCCAGACCCCCTCCGCCAACGCCTAAA
GGCCACATGCCGCTCCCCGCCATCGCCGACGCCGCGCTCACTGCTCTGTTCGACCGCATGGTCCTCTCCCCGCCGGTTCC
TGTCCTCCGCCTAGGCGCCCCCTCTCGCCTCACAATCCGCTCGTCCGCGATTCCGCTGGTCTCGCTCGACTCCCCTGACT
TGGCCTCCCTTCGCGCCGCCGGCGACGTGGGCTACTTCCACCTCGTCGGCCATGGCATCCCTTCCCAGCTGCCATCCTCT
GCACTCGCTGAGCTGTCTCGCGTCGACGCGTCCGCTATGCGCGCGTCCATTCTTTCCACGCTCGGGTTCTCCGCGGAGGC
TGAGGGAGTGGACGCCGGCGTCGAACCCGTCATGGTGTTCGACGTCGACGAGCTGGGGATGGACGCGCTCCCGGCGGCGC
TGGAGTACGCGCGGCTGATGAGGGAGGTGGGTATGCAGGTGGTGGGGCTTTTCTCTGGGTCTGGTGGGGTGGGTTTCGGG
GAGAAGCCGTTCGCGGAGGAGGGGGGAAGGAAGGCGAGGTGCCTGGTGTGGGTCTCCAAGGTCGGCTCCGGCGAGCCGGC
GGTGCCTCCGGCAGCCGGTGACGCAAAGGCGTATCCGTACGTCCTGGGACTCCATTGCGAGTGGGAGCAGGAAGCCGGTG
CGTCGAGCTGGGTGATGGACGACAGCGGCGAGTGGAGGGCCGTAGGCGCCAGCGAGGGTGCACTCCTGGTCACCATCGGT
GACATTGCTCAGGTATCGCTGCAACACCCATTTCTATTGACTTAGTTTTTATTCCCTGGGAAGTGCTTTTGTCTGATCAT
GATAGCATTAGATTAGTATATAGAT------GTGTAGTGTAGTGTGTACACAATCGTGCAAATCGTTCATTTCATCTACA
ATATATTTAGCAAAGGATAAGCACAAGTGCATTGCACAACCTTTTCATTCATAAGGGTATGTTTGAATCGAGCGCCCTAC
CAAAAGTTTAGCATATAACCAAACTAAAGGCATGATCAAAATT-TTGACAAGTATATAGCTTGTTTGATTGTAACTCTAG
AACCTGCTAAAATATTGGG-AAAAAAGTTGGTCTTCATTTGGTTTGCAGCAAATAACCAACATACATGCATATTCGCGCG
CAATTTGGTCGCCGAATTTTTTGGTGAATGGTTTTTCCGCCGTTATTTTTCCCGCGTGTTGGTAAAAATTACGTG--TGG
CACCATGCAGCTGTCGGCTGGCGAGCGAAAATTGGCGCGCGGATTTTACAACTTGCATTTTGCCATAATAGTAGATATGC
ATTTATTTCATTTTGCTTGATACAATGCACATGCCAGCCATTTTATTGTTATTAATGTGATTAAGTACT-----AAAAAA
TACAA---TATTGGTATATACTTATTGACTTGCCAAAAAAACATGATTTA---------GCCAATAAGAGGTGGGCCAGT
ACTAGTTCAGCCGGTTCTCAAGGAAAAAACCAGTAAAAATGAACAAAACCAA-AAACAAAGGATGT--------------
----------------------GGGATAGGAGAGAAGAGATTGTTCTACTGCCATCAAATTCTATGTCTTTTTTTTAG--
TTTCAAAAAAAAATCTAAGT-CCTTTTTTGCATCACTCTACTCAACCTGAACCGGGTCAGCTAATTAAGCCGTGTGTCTG
CATCACTGCATGATTGGTTGACGCTGGGTTGAAAACCACATAAC-AAAAAGAGACAAAGTCACAAAGACCACGTCTTTTG
AAAACAAAGAGGGATCATCATGTATATATTTTTGCTGAAAAAGTGACT-----------TTTTAATCAG-GTCTTTTTGC
AGTAGCAGTAACACCCCTTTTGATGTCGTGCTTCTTTTGTGATGCGTTCTAGGTGTGGAGCAATGGCAAGCTGAAGAAAG
TGAGAGGCATGGTTCGCCCCACTCCTGCCCCCGGCAGCGACGGTGAAGAGGGCGGGGAGCCAGCCCGCCTGTCCATCACC
GTGCTGATCACACTGCCCCTGGACAGCGTCGTCTCGCCGCTGCTGCCGCTGTCTGGTGCCGGCGAAGAGGGCGGCGACGT
GGAGAAGGAGGAGAAGGAGG---TCTCTGAAGACGGTGATGAGAATGTAGGCAGCTTTCGCCCCTTCTCCCTGGAGAGCT
ACGCGTGGGGGCTGCACCATGATCAGCTTGAGTCCAAGGATCCGCTTGCCCCGTACCGCATCTGATTAAGCTCGTTCGTC
ATGGCTCTCTAGCGTTGGATTTTTGTTAGACATGTTCGATTCGTTATAGCTGGACCACAGATGTCTTGTGGTTGTTCTCT
AGTTCTTCGT---------TTGCTGGTGCATGCTGTCGTTGGCTTATATCTCTCTAGACTTTGAGTTGGTCAGAACGACT
TTGGGTAAACCGTTTATTATATTATTATTATCATTATCAAATAAA-TATAGTCATTGTTTGTTTTTATCAAATATAAGTA
TTGAGCAAGTGAGAAGACTGTTTTCCTTATGTTTGCTGGCAAGTCAACCATGTCTGTAGATGGTATTGGAAGCACTATTT
CATCTAAAAATGGGAGCGTCTAATTTTATTTTATTTTTGACACTAAAAACAGTAGGAGAGGTTCTCCTACTATGCTGCAT
TCAAACATCTAGAAGATTTGCGACAAGCCCTAGAAGCATAACAGAAAGCTACAAGGAGTTGACAATAGATGAAATATAAA
GAGGATGCTCTTGAGCAAATCTGCCTTAG----TTTTTCTTTTCTCCTGCCACAAGGCTCTAATACCCTTAAGTTGAGAT
TATTATGCTCCAATCTCCAAGAATAAACATCGACAGAAAGTGACCTTGGTTTTCTCAATTATAGAAATCCGCAAGGTATT
CGGAGACCATTGGATATTAAATTTAGACCAACAATTGTTGCTGGATGCAAACAAAAG-----------------CTCTTC
GAGAGCAATGTAATTAATAGCATGCCTAAATATAATATAAAAAGATCCAAAACCG-AGATCCAACTAATCTCAGCCATCA
ATCTCTGGCAATCAACAACCTAGATTGCTCCAATATTGAGCACATGTTTAGCACACATTTAATAGGATACCTAGTATAAA
TGTTTGCATTAATCACCTACTTGACATTGCACGTACTGACCAGGCTAGTATTGATCCCCCGACTATGTGGTTGGAATAGC
CTCCTGGATTCCTTCTGCCTATCCTCATTGACGATGTAAGCATTATTTACGACT-
>SNPs
SS--S-----------S--------------SS-----------------------S-----------------------
------------------------------------S---------------S---------------------------
--------------------------------------------------------------------------------
--------------S---S-----------S-------------------------------------------------
--------------------------------------------------------------SS-S-SSSSSS-SSS---
--------------------------------------------------------------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S----------------------
--------------------------------------------------------------------------------
-------------S------------------------------S-----------------------------S-----
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------SS------S----------
--------------------------------S--------------S--------------------------------
----------------------S----------S--------------------------S-------------------
--------------------------------S------------------------S----S-----------------
--------------------S-----------------------------------------------------------
-------------------------------------------------S-----------------------------S
-----S-S-------------S----------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-S----------------------------------S------------S-----S------------------------
--------------------S-----------------------------------------------------------
----------------S----S----------------------------------------------------------
----------------------------S---------------------------------------------------
---------S-------------------------------SSS------------------S-----------------
------------------------S-----------------------------S---S---------------------
---S---S-------------SSSSS-SS-S-SS------------------------S---SS-----------SS---
SS------------------S-----------------------------------------------------------
-----------------------------------------------------------------------------S--
S-SSSSSSSSS-SS------------------------------------SSSSSSSSS-----------S-S-------
-------S--------------S----------------SSS-SS---S-SS--------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------------------------------SS-S-S-SS-S--
------------------------------------S---------S---------------------------------
--------------------S----------------------SS----S-----------S----S-S-----------
------S-S--S----S----------S--------------------SSSSSSSSSSS---------------------
--------------------------------------------------------------------------------
-------------------S--------------------S---------------------------------------
---------------------------------------------------------------S----------------
----S--S---------------------------------------------------S----S--------S------
---------------S------------------------------------------------------S--------S
--------------------------------------------------------------------------------
---SSS-SSSSSSSSSSSS----------------------------------SS-S-----------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------SSSS----S---------------
------S------------------------S---------------------S---S----------------------
--------------------SSS-SSSSSSSSS---------------------------------------S-------
----------------------------------------------------------------------------S---
----------------------------------------S---------------------------------------
----------S------------------S------------------S----------------------S--------
--------------------------------------------------------S-----------------------
-----------------------S----S-------------SS------------------------S-----------
-------------------------------------------------S-----
>forward_558
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GTCGCTCCGCCTATTTCCTT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CATCCGCCGTCATTTTTCCC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_2425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGCTCGCCGAATTTTTGACG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_3520
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATGGCTCTCTAGCGTTGGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
