>input_sequence_35236
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-------------------------------------------------------GCTCCCCGATATAGCCTGGATCCCA
GATTATTCCTTCCC--------TCGATCGAAGC---CGAGCTCAGCAGGCGCCGGAGCAGGGACGGGGACGCCCGTCGCA
GGCCGCCTCGCCGCCCGAGTTGCCGCCGTCCGGGGCCCTTCTCGCCTGGTGAGCCCCCGTACACAGTTAGGTAGTCTTCC
GAGGAAAGTAGTTCTTGTCGCCCCTCGATTTGGCGAGTTTCTGTTCAGATAACCTCCTTGATTCTTCCAAGGAAGGTAGC
TCTA------GCCGCTCCTTGATCTGGCGAATTTTCTGTTTAGATTTCTTC-CTTCTCCTTCCTTTCCAGTTGTAGGCCG
AATCTTGC-TGTAAAGATTGCCCCTTCGCTTGAGCAATTATAGTTTAACGGACGTTTCCGAAAAAAGTATGTAGTTTAAC
GGAGCGATTAGGGTGTCTGTTCATCGAAT-TTCAGGATTGGCCTGACGGGTTTCTCTGGAGAGATGATTTGCTGTTCTGT
CAAACAAGAGAGGA-TTTTTGATTTGCAACCTATCATGTCGGCCTATTGTCAGGAAATAGCAGC-GCGTTGTTAGTGGAA
TGCTCTGTTTAGTTTTTATTACCACAGGATTCTGTACACGTGATTTCTGTGATAAGCATTGAGTTGTTCTTTCTGGTAGG
AGGAAAAGATGGAGCCTGGAAGGAAACCTC---GTCTTCTGGACCTATGCATCCGGAGCGCCGTCGACAACCTCAGGACC
CTCAACAGCGTGGACATCGTGGCTGAGGAGCTGCTCAAGAGAATCCTGCCCCACTGCACCTTGGAGCAGCTGACCCACAT
AGAGAGCTGCACACATGTATGCTTGCTTCTCGCGGAGCAATTCATCTTCACTTATTTGCAGATCTATCAGGATGTGTTTC
TGATTTCTACTCTTCTACCCCGACAGGCGGACCTTACCGACGTTACCGATGTGCTGTGGAAGAGATTCTTCCAGCGGGAG
TTTGGTGAGGATAATATGAACCTTGCCATCAAGAGGATGAAGGAGAACGGAGTGCGTTACAAATGGAAGAAACTCTTTGA
GGTACAGTAAAAGATTCTCTAGTTGTTTGCTCTT--CTTGCTGTCTGTTTCGTTAAAATTTATGTTGCCTTCATTCTTGA
AATAATTTGACCCTATATAATACGTTTTCAGGCAAGAACAGAAAAGCAAAAGCAAGTTGAAGCAAGAATGTCGGCAGGGC
TGAAAAACAAATATCAAGCAGCAAACGCTGGTAAGTAGATCGGTTGGGTATGGCATGACACCTATAACGTACCAACTTTT
ATTTTCTATAACTTCAACTTATAGCAACTAAAAAACAATGGTTTAGAAAGAAATGTAACATCTAGTTCTTTTTCTGACAG
CCTGGTTTATGATTCACGATCAGTATGACTCATGTGCAATATTACTTTCTGTCCCTTTTTTATCCAGCGAAACAAAGCAA
ACAAATTAAAGTTTGTACGAAGATCCCACCCAACAGCAAAAGAAGTTTTTGGGGAGGTGATTTCCTGTCCCT----CTGC
TGTATTCTCGCCCGTAGTATGCTACACTTTCCACTTTTCCAGTTTCTGATAAGATGCAAACCTTGACAGGAAGTGGATCC
AGCAGCCTATCCAACTCCAGCTACAAGAGCCCTATATTGAAAAAGGCAAGGATGGAGGTTGACAGGTAACTATCACTCTT
GGAATGATGACCCTAAATGAACGCTTCTCAAATTATTGTTTAACACACTATTTCTGTAACAGCCGGGCGAAAATGCAAGC
TGCTATCCAAAGGAACACTTTTGCGAGGTTTGTCACACAGCAATGCGCTCTCATATTACACAATTTTGCCGCAAATTTCA
CCTATATTGTGTTCCTTAAATCCCTTGCAGTTTTTACCTTTCACATT------GTAAACCTTGGCTCTGAATTTACAGGT
CATCACAGCCAGCAAGGCTGACCTTTCCTAGTGAACAGACATCGAGGACGACGACAATTCATCGACCTAATTCAACGATA
ACCATCACCAAACCAACTGGTCCGAACAGGCCGATTCAAAAGCAGAACACCAGACCCAAATTTTAGAGGCCACTGCCATG
GCATCATGC-TTGTGACCGTGGAGTTCGCCATGATTGCGCGGAAATCTTCTTTCCTGTGGACAAGTTGGCACTTCTTGCC
ATTCACCAAGTCTTTGTGAGACAGGAAAGAATCTTGTTTGTAGCTGCCCCAGCTGAGCACTTGTATCTTTAT--AGGGGA
GCAAACAATATCTGTACCCAACATTTTTTTTAAATTTGATTCAATC----------------------------------
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----------------------------
>chr1D_1_TraesCS1D01G044200
TGGAGACGTGGTGGCCCCCGACCCTTGCCAGC-GGGAGGGATCTTGCTTTGTTTTTAGGTGTTTTTTTGAGTTCGTTTAG
GGTCTGTGTCTTGCTCAGGAAGATGAGGCGGTGGTGACCCCCTAAAGATGGAATAAGGTTCTCCCCGCCTAGCCACTGTT
CCGGTGATGGGTGTAGCATCGTCGGATGGCGTGTGGAGGTATGTCTTCGGCAGATCTCGTGGGATTCAGTCGAAGCCGGT
CTTCGGTGGATATGTTTCGATCCAGTCTTCCTTCGTGTGTCTGCAGGTTGGACCCT--CGATCTATACTTCTCTTCGTCG
GCAACA---GTTCTTGTTCTGATGCGCTGGGCCTTAGCACGACGACTTTTCGACTGTCTACTACAACAGGCCCGGCTCCG
ATGAGGGAGGG-TGATGACAAAATCACGCTTGTAGTCGTCGCTAAATGGTCTACGGACATGAATACTTCTTTTTTATTAT
TTGTGTG-TTTTCATACTGCCATACCATGATAAGTATTCTCTCCGTCCTATAATATAAGAGCGTCTTTTACACTACACTA
GTGTCAAAAAGGCTTTTACTCCCTCCGTTCCTAAATGTAAGTCTTTGTAGAGATTCCATTATAA-ACCACATACGGATGT
ATATAGATGCATTTTAAGTTTAGATTCATTCATTTTGCTCCGTATGTAGTCCATTTAG-TGAAATCTCTACAAAGACTTA
CATTTAGGAACGGAGGGAGTAGATCAAAAATTTCCTCGAAGAAAAACATGGCC-GTGAAGCTCTCACGGATCACCTCGAG
TCCTCGAGCTAGGAGAAAAAGGAAAGAT----ACAAATGATAACGGAAATGGAAAGCACTGGAAGCCGTCTTCAACATTA
ATGACGTTAACAGATCGGACGGCCGCGACCCCGGACACGTGGCAGCCGATTAACGGCTCCGGATCCGACCGGGCCGCGGT
CCCCTTTCCCCGACTCCCACTGCAGAACGGTGACGCGTTCTTTTCTCTTTTTATTGCTCCCCGATATAGCCTGGATCCCA
GATTATTCCTTCCC--------TCGATCGAAGC---CGAGCTCAGCAGGCGCCGGAGCAGGGACGGGGACGCCCGTCGCA
GGCCGCCTCGCCGCCCGAGTTGCCGCCGTCCGGGGCCCTTCTCGCCTGGTGAGCCCCCGTACACAGTTAGGTAGTCTTCC
GAGGAAAGTAGTTCTTGTCGCCCCTCGATTTGGCGAGTTTCTGTTCAGATAACCTCCTTGATTCTTCCAAGGAAGGTAGC
TCTA------GCCGCTCCTTGATCTGGCGAATTTTCTGTTTAGATTTCTTC-CTTCTCCTTCCTTTCCAGTTGTAGGCCG
AATCTTGC-TGTAAAGATTGCCCCTTCGCTTGAGCAATTATAGTTTAACGGACGTTTCCGAAAAAAGTATGTAGTTTAAC
GGAGCGATTAGGGTGTCTGTTCATCGAAT-TTCAGGATTGGCCTGACGGGTTTCTCTGGAGAGATGATTTGCTGTTCTGT
CAAACAAGAGAGGA-TTTTTGATTTGCAACCTATCATGTCGGCCTATTGTCAGGAAATAGCAGC-GCGTTGTTAGTGGAA
TGCTCTGTTTAGTTTTTATTACCACAGGATTCTGTACACGTGATTTCTGTGATAAGCATTGAGTTGTTCTTTCTGGTAGG
AGGAAAAGATGGAGCCTGGAAGGAAACCTC---GTCTTCTGGACCTATGCATCCGGAGCGCCGTCGACAACCTCAGGACC
CTCAACAGCGTGGACATCGTGGCTGAGGAGCTGCTCAAGAGAATCCTGCCCCACTGCACCTTGGAGCAGCTGACCCACAT
AGAGAGCTGCACACATGTATGCTTGCTTCTCGCGGAGCAATTCATCTTCACTTATTTGCAGATCTATCAGGATGTGTTTC
TGATTTCTACTCTTCTACCCCGACAGGCGGACCTTACCGACGTTACCGATGTGCTGTGGAAGAGATTCTTCCAGCGGGAG
TTTGGTGAGGATAATATGAACCTTGCCATCAAGAGGATGAAGGAGAACGGAGTGCGTTACAAATGGAAGAAACTCTTTGA
GGTACAGTAAAAGATTCTCTAGTTGTTTGCTCTT--CTTGCTGTCTGTTTCGTTAAAATTTATGTTGCCTTCATTCTTGA
AATAATTTGACCCTATATAATACGTTTTCAGGCAAGAACAGAAAAGCAAAAGCAAGTTGAAGCAAGAATGTCGGCAGGGC
TGAAAAACAAATATCAAGCAGCAAACGCTGGTAAGTAGATCGGTTGGGTATGGCATGACACCTATAACGTACCAACTTTT
ATTTTCTATAACTTCAACTTATAGCAACTAAAAAACAATGGTTTAGAAAGAAATGTAACATCTAGTTCTTTTTCTGACAG
CCTGGTTTATGATTCACGATCAGTATGACTCATGTGCAATATTACTTTCTGTCCCTTTTTTATCCAGCGAAACAAAGCAA
ACAAATTAAAGTTTGTACGAAGATCCCACCCAACAGCAAAAGAAGTTTTTGGGGAGGTGATTTCCTGTCCCT----CTGC
TGTATTCTCGCCCGTAGTATGCTACACTTTCCACTTTTCCAGTTTCTGATAAGATGCAAACCTTGACAGGAAGTGGATCC
AGCAGCCTATCCAACTCCAGCTACAAGAGCCCTATATTGAAAAAGGCAAGGATGGAGGTTGACAGGTAACTATCACTCTT
GGAATGATGACCCTAAATGAACGCTTCTCAAATTATTGTTTAACACACTATTTCTGTAACAGCCGGGCGAAAATGCAAGC
TGCTATCCAAAGGAACACTTTTGCGAGGTTTGTCACACAGCAATGCGCTCTCATATTACACAATTTTGCCGCAAATTTCA
CCTATATTGTGTTCCTTAAATCCCTTGCAGTTTTTACCTTTCACATT------GTAAACCTTGGCTCTGAATTTACAGGT
CATCACAGCCAGCAAGGCTGACCTTTCCTAGTGAACAGACATCGAGGACGACGACAATTCATCGACCTAATTCAACGATA
ACCATCACCAAACCAACTGGTCCGAACAGGCCGATTCAAAAGCAGAACACCAGACCCAAATTTTAGAGGCCACTGCCATG
GCATCATGC-TTGTGACCGTGGAGTTCGCCATGATTGCGCGGAAATCTTCTTTCCTGTGGACAAGTTGGCACTTCTTGCC
ATTCACCAAGTCTTTGTGAGACAGGAAAGAATCTTGTTTGTAGCTGCCCCAGCTGAGCACTTGTATCTTTAT--AGGGGA
GCAAACAATATCTGTACCCAACATTTTTTTTAAATTTGATTCAATCAAATCATTGAAGTCATGAGCTTAAAAAAAATAGT
GATTCTGATGAGAAATCAAGTAATGA---CACATGAACAGTTAACTACTAACAATTGTAGATAGTAATCAGTAAGGGGAA
ATGATGATTAGTAAAGATAAGATGATGTATTCTACTCTCATCTTCTTGATTTTTAAGATAATTTCAGAAAGGAGAACTTC
GTTGAATTTCAGACTAGTATCAACTATTGACTTTTATTTCCACATCAGATGGATATAACGCGTAACTTTAAAAAATTGAA
TTATTTAGATAAGGGTAGGTCTCTGCAATTCATTTTGAAAGAAGAAAAACGCACACGTGTGGCCGGAAGCCCATCATGGA
TAGCTTTGTTTACATCGTTCATGCAATTACACATAGGAAAGCTCAGGGAGCTCATCAAAGACGACAAACAAAAGCTCTCA
AATACTAACTAATCAGATGCAACAGGCAATTAGCTAGTTCTATGACAGATTAATTGATCTGAAAAGAAATACTTTACATG
AGAAAAATCATCCAAGGATCAAAACTTTCTGACGCCCTGCCCTGGCCAGCGATCGAAGCAGAGTAATCTGTTTTCTCTTC
CCTTGTTTTTCAAGATGGTCAGTGATGCGGGCTGGCACAAGAAGCTCTGCTTCCAATTAATTCTGCAAGAACAATTCAGT
TCTCCCTT-GTGTTGCCAGCTGATACTCTGACCTCGGAAGCTTCTGAAT-----ATTTGATATATCAGCAGCTAGCTTAT
CGATTTGTAAGTCAAATAT-------------------------------------------------------------
----------------------AGTATCTGACGAATTAAGTCTCCATCTGAGTTCAAGGTGTTAGCAGTGTCTAAAACAA
AACCAACCTTAATAAGTA---GTACTACTCGTCGTATGTATTTCAAAGTAGAAACTGGTGAAAAGCTTGTTCAAATCAAA
ATGTGGTGACGCATACTGATCAAGATAGCTGCAGCCATTTGCC------CAGCTAGGTAGTCCACCATCCTCTGTCAGTG
GTAC-GAAGATTGAGAAGATGCATATTA
>chr1B_1
TGGAGACGTGGTGGCCCCTGACCCTTGCCAGCGGGGAGGGACCTTGCTTTGTTTTTAGGTGTTTTTTTGAGTTTGTTTAG
GGTCTGTGTCTTGCTCAGGAAGACGAGGCGGTGATGACCCCCTAAAGATGGAATAAGGTTCTCTCCGCCTAGCCACTGTT
CCGGTGATGGGTATAGCATCATCGGATGGCGCGTGGAGGTATGTCTTCGGCAGATCTCGTGGGATTCAGTCGGAGCTGGT
CTTTGGTGGATCTGCTTCGACCCAGTCTTCCTTCGTGTGTCTACATGTTGGACCCTTTCAATCTATACTTCTTTTCCTCG
ACAACA---GTTCTTGTTCTGATGCGCTGGGCCTTAGCACGACGACTTTCCGACTGTCCACTACAACAAGCCCGGCTGTG
CTGAGGGAGGGATGATGACAAAATCGCGCTTGTAGTCATCGCAAAATGGTCTACGAACATGAATGCTTTTTTCTAATTAT
TTTTGTGTTTTTCATACTGCCATATCATGATAAA----------------------------------------------
----------------TACTCCCTCCGTTTCTAAATATTTGTCTTTATAGAGATTTCAACAAGTGACTACATACGAAGCA
AAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCTGTATGTGGTAGTTCATTTTGAATTTCTAGAAAGACAAA
TATTTAAAAACAGAGGGAGTAGATCGAGAATTTCCTCAAAGAAAAACATGGCC-GTGAAGCTCTCACGGGTCACCTCGAG
TCCCCGAGCTAGG--AAAAAGGAAACAC----GCAAATGAAAACGGAAATGGAAAGCATTAGAAGCCGTCTTCAACATTA
ATGACGTTAGCAGATCGGACGGCCGCGACCACGGACACGTGGCAGCCGATTAACGGCTCCGGATCCGACCGGGCCGCGGT
CCCCTTTCCCCG------ACTGCAGAACGGTGACGCGTTCTTTTCTCTTTTTATTGCTCCCCGATATAGCCTGGATCCGA
GATTATTCCTTGCCCTGTCGCCTCGATCGAAGCCGACGAGCTCAGCCGGCGCCGGAGCAGGGACGGGGACGCCCGTCGCA
GGCCGCCTCGCCGTCCGGGTTGCCGCCGTCCGGGGCCCTTCTCGCCTGGTGAGCCCCCGTACCGAGATAGGCAATTTCCC
AAGAAAAGTAGCTCCTGTCGCCCCTTGATTTGGCGAGTTTCTGTTCAGATAACCTCCTTGATTCTTCCAAGGAAGGTATC
TCTAGATAAAGCCGCTCCTTGATTTGGAGAATTTTCTGTTCAGATTTCTTT-CTTCTCCTTCCTTTCCAGTTGTAGGCCG
AATCTTGC-TGTAAAGATTGCCCCTTCGCTTGAGCAATTATAGTTTAACGGACGTTTCAAAAAAAAAA--GTAGTTTAAC
GGAGCGATTAGGGTGTCTGTTCATCGAAAATTCAGGATTGGCCTGACGGGTTTCCCTGGAGAGATGATTTGTTGTTCTGT
CAAACGAAAGAGGA-T-TTTGATTTGCAGCGTATCACGTCGGCGTATGTCAGGAAA------------TTGTTAGTGGAA
TGCTCTGTTTAGTTTTTG--ACAACAGGATTCTGTACATGTGATTTCTGTGATAAGCATTGAGTTGTTCTTTCTGGTAG-
--GAAAAGATGGAGCCTGGAAGGAAACCTCTGAGTCTTCTGGACCTATGCATCCGGAGCGCCGTCGACAACCTCAGGACC
CTCAACAGCGTGGACATGGTGCCTGACGAGCTGCTCAAGAGAATCCTGCCCCACTGCACCTTGGAGCAGCTGATCCACAT
AGAGAGTTGCACACATGTATGCTTGCTTCTCGCGGAGCAATTCATCTTCACTTACTTGCAGATCTATCAGGATGTGTTTC
TGATTTCTACTCTTCTGCCCCGACAGGCGGACCTTACCGACGTTACCGATGTGCTGTGGAAGAGATTCTTCCAGCGCGAG
TTCGGCGAGGATAATATGAACCTCGCCATCAAGAGAATGAAGGAGAACGGGGTGCGTTACAAATGGAAGAAACTCTTTGA
GGTACAAT----GATTCTCTAGTTGTTTGCTCTTTTCTTGATGTCTGTTTCGTTAAAATTCATGTTGCCTTCATTCTTGA
AATAATTTGACCCTATATAATACGTTTTCAGGCAAGAACAGAAAAGCAAAAGCAAGTTGAAGCAAGAATGTCGGCAGGGC
TCAAAAACAAATATCAAGCAGCAAACGCTGGTAAGTAGATCGGTTGGGTATGGCATGACACATGTAACGTACCAACGTTT
ATGTTCTATAACTTCAATTTATAGCAACTAAAAAACAATGGTTTACAAAGAAATGTAACATCTAATTCTTTTTCTGACAG
CCTGGTTTATGATTCACGATCAGTATGACTCATGTGCAATATTACTTTCTGTCTCATTTTTATCCAGCGAAACAAAGCAA
ACAAATTAAAGTTTGTACCAAGATCCCACCCAACAGCAAAAGAAGTTTTTGGGGAGGTGATTTGCTGTCCCTTTTTCTGC
TGTATTCTCTCCCTCAGTATGCTACGCTTTCCACTTTTCCAGTTTTTGATAAGATGCAAATCTTGACAGGAAGTGGATCC
AGCAGCCTATCCAACTCCAGCTACAAGAGCCCTATACTAAAAAAGGCAAGGATGGAGGTTGACAGGTAACT-TCACTCTT
GGAATGATGACCCTAAATGAACGCTTCTCAAATTATTGTTTAACACACTATTTCTGTAACAGCCGGGCGAAAATGCAAGC
TGCTATCCAAAGGAACACTTTTGCAAGGTTTGTCACACAGCAATGCACTCTCATGTTACGCAATTTTGCCACATATTTCA
CCTATAGTGTGTTCCTTAAATCCCTTGCAGTTTTTACCTTTCACATTGTATCAGTAAACCTTAGCTCTGAATTTACAGGT
CATCACAGCCAGCAAGGCTGACCTTTCCTAGCGAACAGACATCAAGGACGACGACAATTCATCGACCTAATTCAACAATA
ACCATCACCAAACCAACTGGCCCAAACAGGCCGATTCAAAAGCAGAACACCAGACCCAAATTTTAGAGGCCACTGCCATG
ACATCATGCTTTGTGACCGGGGAGTTCGCCATGATTGCGCGGAAATCTTCTTTCCTGTGGACAAGTTGGCACTGCTTGCC
ATTCACCAAGTCTTTGTGAGACAGGAAAGAATCTTGTTTGTAGTTGCCCCAGCTGAGCACCTGTATCTTCCTTCAGGGGA
GCAAACAATATCTGCACCAAACATTTTTTTTAATA-TGATTCAATCAAATCATTGAAGTGTCG--------AAAAATTGT
GATTCTGATGAGAGATCCAGTAATAATGGCACATGACGAGTTAACTACTAACAATTGCCATCTCG---------------
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------------------------------------------AGCTCTCCTTACAGTTAATTCTGCAAGAACAATTCAGT
TCTCCCTTTGTGTTGCCAGCTGATACTCTGACCTCAGAAGCTTCTGAAT-----ATTTGATATATCAGCAGCTAGCTTAT
CGATTTGTAAGTCAAATATAGTACTCCCTCTGTAAACTAATATAAGAGTGTTTAGATCACTACTTTAGTGATCTAAACAC
TCTTATATTAGTTTACGGAGGGAGTATCTGACAAATTAAGTCTCCATCTGAGTTCAAGGTGTTAGCAGTGTCTAAAACAA
AACCAACCTTAATAAGTA---GTACTTGCT---GTATGTATTTCAGAGTAGAAAATGGTGAAAAGCTTGTTCAAATAAAA
ATGTGGTGATGCATACTGATCAAGATAGCTGCAGCCATCTGCC------CAGCTAGCTAGTCCACCAAGCTCTGTCAGTG
GTACTGAAGATTGAGAAGATGCATATTA
>chr1A_1
TGGAGACGCGATGG-CCCCGACCCTTGCCAGT-GGGAGAGATCTTGCTCC-TTTTTAGGTGTTTTTGTGAGTTCGTTTAG
GGCCTATGTCTTGCTCAGGAAGACGAGGCGGTGGTGTCCCCTTGAAGATGGAATAAGGTTCTTCCCGCCTAGCCCTCGTT
TTGATGA----TGTGTCATCGTCGGAGGGTGTGTGGAGGTGTGCCTTCTGCAGATCTTGCGGGATTCGGTCGGTGCTAGT
CTTCGGTGGATCTGCTTTGATCCATGCTTCGTTATTGTGTCTACAGGTTGGATTCTTCCGATCTGTACTTCTCTTCATTG
GCAATTGTTGTTGTTGTTCTGACGCGCTGGGCCATAGTACGACGACTTTCCGACCGTTTACTACAACAGGCCCGACTCTG
ACGAGGGAGGGATGGTGACGAAATCACGCTTGTAGTCGTCGCTAAATGGTCTATGATCATGAATGCAATTATT--ATTAT
TATCGTGTTTCTCATACTGCCATACCATGATAAGTA--------------------------------------------
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------------------GTAGACCGAAATTTCCCTCAAAGAAAAAACATGACGGTGAAGGTCTCACGGATCACCTCTAG
TCCCCGAGCTATG--AAAAAGGAGGAAAACATGCAAATGATAACGGAAATGGAAAGCATTGGAAGCCGTCTCCAACATTA
ATGACGTTAACAGATCGGACGGCCGCGACCCCGGACACGTGGCAGCCGATTAACGGCTCCTGATCCGACCCGGCCGCGGT
CCCCTTTCCCCG------ACTGCAGAACGGTGACGCGTTCTTCTCTCTTTTTATTGCTCCCCGATATAGCCTGGATCCGA
GATTATTCCTTCCCCTGTCGCCTCGATCGAAGCCGACGAGCTCAGCCGGCGCCGGAGCAGGGACGGGGACGCCCGTCGCA
GGCCGCCTCGCCGCCCGAGTCGCCGCCGTCCGGGGCCCTTCTCGCCTGGTGAGCCCCCGTACACAGATAGGTAGTTTTCC
GAGGAAAGTAGTTCTTGTCGCCCCTCGATTTGGCGAGTTTCTGTTCAGATAACCTCCTTGATTCTTCCAAGGAAGGTA--
-------------GCTCCTTGATTTGGCCAATTTTCTGTTTAGATTTCTTTTCTACTCCTTCCTTTCCAGTTGCAGGCTG
AATCTTAGATGTAAAGATTGCCCCTTCGCTTGAGCAATTATAGTTTAACGGACGTTTCCGAAAAAAGTATGTAGTTCAAC
GGAGCGATTAGGGTGTCTGTTCATCGAAGATTCAGGATTGGGCTGACGGGTTTCTCTGGAGAGATGATTTGTTGTTCTGT
CAAACGAGAGAGGAAT-TTTGATTTGCAACCTATCATGTCGGCCTATTTGTCAGGAAAAATAGCAGCGTTGTTAGTGGAA
TGCTCTGTTTAGTTTTTATTACAACAGGATTCTGTACACGTGATTTCTGTGATAAGCAGCGAGTTGTTCTCTCTGGTAGG
AGGCAAAGATGGAGCCTGGAAGGAAACCTCTGAGTCTGCTGGACCTATGCATCCGGAGCGCCGTCGACAACCTCAGGACC
CTCAACAGCGTCGACATCGTGCCTGACGAGCTGCTCAAGAGAATCCTGCCCCACTGCACCTTGGAGCAGCTGAGGCACAT
CGAGAGTTGCACACATGTATGCTT----CTCGCGGAGCAACTCATCTTC-----TTTGCACATCTATCAGGACGTGTTTG
TGATTTTTACTCTTCTGCTCCGACAGGCGGACCTTACCGACGTTACAGATGTGCTGTGGAAGAGATTCTTCCAGCGCGAG
TTCGGTGAGGAAAATATGAACCTTGCCATCAAGAGAATGAAGGAGAACAGGGTGCGTTACAAATGGAAGAAACTCTTTGA
GGTACAAT----GATTCTCTAGTTGTTTTCTCTT--CTTGCTATCTGTTTCGGTAAAATTTATGTTGCCTTCATTCTTGA
AATAATTTGACCCTATA-----CGTTTTCAGGCAAGAACAGAAAAGCAAAAGCAAGTTGAAGCAAGAATGTCGGCTGGGC
TGAAAAACAAATATCAAGCAGCAAACGCTGGTAAGTAGATCGGTTGGGTACGGCATGACACCTATAACGTACCAACATTT
ATATTCTATAAACAGCA--TATAGCAACTAAAAAACAATGGTTTAGAAAGAAATGTAACATCTAATCATTTTTCTGACAG
CCTGGTTTATGATTCACGATCAGTATGACTCATGTGCGATATTACTTTCTGTCTCTTTTTTATCCAGCGAAACAGAGCAA
ACAAATTAAAGTTTGTACGAAGATCCCACCGAACAGCAAAAGAAGTTTTTGGGGAGGTGATTTCCTGACCCTTTTTCTGC
TCTATTCTCGCCAGCAGTATGCTACACTTTCCACTTTTCCAGTTTCTGATAATATGCAAATCTTGACAGGAAGTGGATCC
AGCAGCCTAGCCAACTCCAGCTACAAGAGCCCTATATTGAAAAAGGCAAGGATGGAGGTTGACAGGTGACTATCACTCTC
GGAATGATGCCCATAAATGCTCAAAGTATCGTTTAA--TTTAACACACTATTTCTGTTACAGTCGGGCGAAAATGCAAGC
TGCTATCCAAAGGAACACTGTTGCAAGGTTTGTCACACAGCAATGCGCTCTCATGTTGCACAATTTTGTCACAAATATCA
CCTATATTTTGTTCCTTCAATCCCTTGCAGTTTCTACCTTTCACACTGTATCAGTAAACTTTGGCTCTGAATTTACAGGT
CATCACAGCCAGCAAGGCTGACCTTTCCTAGCGAACAGACATCGAGGACGACGACAATTCATCGACCTAATTCAACGATA
ACCATCACCAAACCAGTTGGTCCGAACAGGCCCATTCAAAAGCAGAACACCAGACCCAAATTTTAGAGGCCACTGCCATG
ACATCATGC-TTGTGACCGTGGAGTTCGCCATGATTGCGCGGAAATCGTAGTTCCTGTGGA------------------C
ATTCAACAAGTCTTTGTGAGACAGGGAAGAGTCTTGTTTGTAGTTGCCCCAGCTGAGCACTTGTATCTTT----AGGGGA
GCAAACAATATCTGCACCAAACATTTTTTCAAAATTAGATTCAATCAAATCATTGAAATGCATGAGCTTCGAAGAATTGT
GATTCTGATGAGAAATCCAGTAATAATGGCACATGACGAGTTAACTACTAACAATTGCCATCTCG---------------
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------------------------------------------AGCTCTCCTGCCAATTAATTCTGCAAGAACAATTCAGT
TCCCCCTTCGTGTTGCCAGCTGATACTCTGACCTCAGAAGCTTCTGAATATTTGATTTGATATATCAGCAGCTAGCTTAT
CGATTTGTTCGTGAAAC---------------------------------------------------------------
----------------------AGTATCTGACGAACTAAGTCTCCATCTGAGTTCAGAGTGTTGGCAGTGTCTAAAACAA
TACCAACCTTAATAAGTAGTAGTACTTGCT---GCATGTATTTCAGAGTAGAAAATGGTGAAAAGCTTGTTCAAATAAAA
ATGTGGTGATGCATACTGATCAAGATATCTGCAGCCATTTGCCCAGCTACAGCTAGCTAGTCCACCAAGCTCTGTCAGTG
GTACTGAAGATTGAGAAGATGCATATTA
>SNPs
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------------------------------------------------------S---S---
-----------S--S---------------------------S---------------------------------S---
-------------------------------------------------S----------------------------S-
-------------------------------------------------------S--------S---S-----S-----
--S---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------S------S-SS------S--------S--SS-SSS---S-------S-SSS
-S--SSS--S--S-SS-S-S--S-S-SSS--SS-S-S-SS-SSSSSSS-SSSS--S-S--SS---S----S------SS-
S-----SS---S-------------S-----------S------------------------------------------
---S---------SS----------S-S----S-------------------------S---------------------
--------------------------------------------------------------------------------
------------SSSSSS------------------------------------------------------------S-
----------------------------------------------S---------------------------------
------------------------------------------------------------------S--------S----
------------------------------------------------------------------------------S-
-----------------------S--------------------------S-----------------------------
--------------------------------------------------------------------------------
----------------------------S------------------------------------------S--------
-----S----------S-------------------------------SSSS-----S-SS-------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----S----------------------------------------------S------
------S-------------------------------------------------------------------------
----------------S-----------------------------------------------------------S---
--S--------------------------------S--------------S-----------------------------
------S-SSSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--S--------------S----------------------------------------------S---------------
-----------------------------------------------------S--------------------------
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--------------S---------------------------------------------S-------------------
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------------------------S-----------------------------S---------------S---------
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-------------------------------S------------------------------------------------
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S------------------------------------------------------------------------S------
-------------------------------------------S--------------------------S---------
--------------S---S----------------------------------------SSS-SSSS-SSS------S--
-----------------S------S-----------SS-------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-------------------------------
-----------------------------------S--------------------------------------------
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--------------------------SSSSSSS------------S--------S---------------------S---
---------S----------------------------------------------S----------SS-----------
----------------------------
>forward_804
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----------------------------------------------------------------CACGGATCACCTCGAG
TCCT----------------------------------------------------------------------------
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>reverse_1834
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-------------------------------------------------------------------------CCCACAT
AGAGAGCTGCACA-------------------------------------------------------------------
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>forward_1304
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----GCTCTAGCCGCTCCTTGATC--------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3121
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GCATCATGCTTGTGACCGTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGCTGACCCACAT
AGAGAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAAACTTTCTGACGCCCTGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
