>input_sequence_35177
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------------------------------ATGCTGTCATGTTATTGCAGAGCAGGAGGGGGTCAAAGCAGAAGAAGCGC
GATGCAGTGCTTCCGGTTCGCGAGCTGGGACAAGGAGCGGGACAAGGAGGAGCTGCAGGTGCCTGCACGGTCTCAGTCGG
CGCGTTCCAACAGCAGCATCTCCACGGACCATGACGCACGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCC
GAGATCAGCGTCGAGTCCTTTGGCCGGTACCGGCAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCAC
CTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTCAGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACC
GCGGCACCATCCGGAGCACCCTCGAGCCGCGCCGAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAG
GTGACATTCTCTTCTTTTCCGCATGCATTGCTTCCAGCTCCACCCAACTTAGCATAAACATGGTGTCAGAGCTCATCCAT
GGCGGTGATCCGATCATCCACCCGAAAAACCATCCATAATCTGGATGGCTTGATGCAGATGATAACACCAATGTTTTGAT
TCGTCATCCAGGGACATAAGGAATGGGTGACCGAGGTGAACTTTCTTGGGGTGGTGGGTCATCCCAACCTGGTGAAGCTC
ATCGGCTACTGCGCAGAGGACGACGAGAGGGGGATTCAGTTGCTGCTCGTCTACGAATTCATGCCTCACGGAAGCCTAGC
TGATCACCTGTCAACAAGATCACCAAAGCCCGCTTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTC
TCAAGTACCTGCACGAAGATTCTGAATTCAAGGTAAGCATCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTG
ATTGGTGAAAGATAAG-----ATCATAGAAGCATGACCTATTTTGGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATC
TGCCATATATGAATATGTTCTTCCAGATAATATTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAAC
GCAAAACTGTCGGACTTCGGCTTGGCTAGACTGGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGC-
-----------CCATCTTCATTGTCCAGCACCTGATGGGTGATGGCACTATTCTCAATTCCATGGCGCAATGCTGACATA
TTGAATAGCATACTGTGACTTTCAGAGGTAGCTTTGCAAG--TTCACCCAAGTATGATCGGTTCAGTAGGTACTTGGTAG
TCAGTAGCAAGAATAGTTCATATTGTGGCCTTCCGTACTTGTCAGACAAACCCAAAACCAGGAGTGGTTAAAAGAAAACT
CCTCCACG---TGAATGGATGCTTAGCAGTCAGCAAGTACTTCCAAAAGATTATTGGCCTGTGAAATAAGAAATGGACAA
TACCATCATCCTAGATACACAAGCAGAACAAA-GGTAGGCAGTTAGGCACTTCCGGGTTAGTTAACATGCTAGTGTAGGA
AGACCGGTTAGGAAAGTCAGCTAACCCTGCTGGTTGGTTAAAATCAAC---TAACTTTTCTGGCTGATTTCCAATTGTAG
CATTTTATCACATGTGATGACAAATTTGCAAGTAAAAGTAGCCTCTGTTTGCAGCTTAACTCT-GATACCTGACATTTGT
TACCTATAAAA-----AGTTAAATTTCTCTTTTCATTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTC
CTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAATGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACA
GGCCGGAGGCCTCTGGACCGGAACAGACCGAGGGGTGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACAC
CAAGAAGTTTGAAACCATAATGGATCCAAGGCTCGAAGGGAACTACAGCATGAAATCGGCAGTCAGGATTGCCTCGCTGG
CAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGAT
AGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAAGCCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGG
CCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAGCTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGC
TTGTGAGAACACAATGA---------------------------------------------------------------
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>chr1A_1_TraesCS1A01G141300
GTCCATCAAGATGAAAACGACTAAATGGAGAAAATCACAATGTTACTTGGGAAAACATATACAAATGTTGCTTTCTGAGA
GATCCGAACAGCAAGTACATCATGTACGG-AACCATACGCTCCACTGGTGATTACTATTTTGGTAGTCTTTTCTTCTTTT
GAACTTTGATTACTCTTTTAGTTTTACTACCCCACAACCCTGATGAGAGTTCTTGTTCCTGCGA-TTGTCAGTTGCCATT
TCCCTCTCCTCGCC--GTGCTTATTTCAACACCTGCACCCATCACG---------------------ATCCAAACCCTCA
CGTTTCTCTCGCGTCCCCTCCCCTCGTCCCAGCTCCCAAAGCAAGCAAGCGAGCAGCGAGCGACCAACCAAACAGAAAGA
GACAGCCCGAAGCAGGGGCCGGCCATCCATTGACCTACTAACTACGCAATCCAATATCCAAATCCCGTACCCTGAACCAG
AAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGGGAGGCTCAGCTAGGTGGCTTTTGCCCAGGTGAGCAGGAAACG
ACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCATTTCAACTTCTCTTGGGTTGGTTTTGGA----GAAGAA---GGTTGA
GCAGTTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTGCGATTTCTGTCTGGCTGATCGTCTCCATGGGTGTGTGTTCTGG
TCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAGATTGGTGCGTCTTTT-GCATTAGTAATTGATTGATCCAGTAGG
ATCTCATCTTTATTTGAAAAGTGCCAATCTCTTTTGCCTCTTCTGAAACCCCGTTAGTTTTCTTCTTTTGACGCCTTCAA
GGTTTC------------------------TCTCCCTCCCTCCTTCTGGTTGTACTAGAATAATGG-----CGCTGCTTT
CTGCACCTGGTCTTCTTCACAATCCGTG-------CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAACTGAT
TACTATAGTAGCTGAA-GGCTGCACCTTTGATGCTGTCATGTTATTGCAGAGCAGGAGGGGGTCAAAGCAGAAGAAGCGC
GATGCAGTGCTTCCGGTTCGCGAGCTGGGACAAGGAGCGGGACAAGGAGGAGCTGCAGGTGCCTGCACGGTCTCAGTCGG
CGCGTTCCAACAGCAGCATCTCCACGGACCATGACGCACGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCC
GAGATCAGCGTCGAGTCCTTTGGCCGGTACCGGCAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCAC
CTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTCAGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACC
GCGGCACCATCCGGAGCACCCTCGAGCCGCGCCGAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAG
GTGACATTCTCTTCTTTTCCGCATGCATTGCTTCCAGCTCCACCCAACTTAGCATAAACATGGTGTCAGAGCTCATCCAT
GGCGGTGATCCGATCATCCACCCGAAAAACCATCCATAATCTGGATGGCTTGATGCAGATGATAACACCAATGTTTTGAT
TCGTCATCCAGGGACATAAGGAATGGGTGACCGAGGTGAACTTTCTTGGGGTGGTGGGTCATCCCAACCTGGTGAAGCTC
ATCGGCTACTGCGCAGAGGACGACGAGAGGGGGATTCAGTTGCTGCTCGTCTACGAATTCATGCCTCACGGAAGCCTAGC
TGATCACCTGTCAACAAGATCACCAAAGCCCGCTTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTC
TCAAGTACCTGCACGAAGATTCTGAATTCAAGGTAAGCATCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTG
ATTGGTGAAAGATAAG-----ATCATAGAAGCATGACCTATTTTGGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATC
TGCCATATATGAATATGTTCTTCCAGATAATATTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAAC
GCAAAACTGTCGGACTTCGGCTTGGCTAGACTGGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGC-
-----------CCATCTTCATTGTCCAGCACCTGATGGGTGATGGCACTATTCTCAATTCCATGGCGCAATGCTGACATA
TTGAATAGCATACTGTGACTTTCAGAGGTAGCTTTGCAAG--TTCACCCAAGTATGATCGGTTCAGTAGGTACTTGGTAG
TCAGTAGCAAGAATAGTTCATATTGTGGCCTTCCGTACTTGTCAGACAAACCCAAAACCAGGAGTGGTTAAAAGAAAACT
CCTCCACG---TGAATGGATGCTTAGCAGTCAGCAAGTACTTCCAAAAGATTATTGGCCTGTGAAATAAGAAATGGACAA
TACCATCATCCTAGATACACAAGCAGAACAAA-GGTAGGCAGTTAGGCACTTCCGGGTTAGTTAACATGCTAGTGTAGGA
AGACCGGTTAGGAAAGTCAGCTAACCCTGCTGGTTGGTTAAAATCAAC---TAACTTTTCTGGCTGATTTCCAATTGTAG
CATTTTATCACATGTGATGACAAATTTGCAAGTAAAAGTAGCCTCTGTTTGCAGCTTAACTCT-GATACCTGACATTTGT
TACCTATAAAA-----AGTTAAATTTCTCTTTTCATTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTC
CTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAATGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACA
GGCCGGAGGCCTCTGGACCGGAACAGACCGAGGGGTGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACAC
CAAGAAGTTTGAAACCATAATGGATCCAAGGCTCGAAGGGAACTACAGCATGAAATCGGCAGTCAGGATTGCCTCGCTGG
CAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGAT
AGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAAGCCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGG
CCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAGCTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGC
TTGTGAGAACACAATGACTCAAAATATGGATGAGATGTTCCTCTTTATGACTTTGACATCCAGAGATATTAGCA-AAAAC
AGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTACCATACAATTCAGAGAACATGATAACTAAAAACAGGAGATTTGGC
AAGCGGCAAGCCTAATGCTATCATCACTAAATAATGGCTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTT
GCCACATAGTTCGGCATTACATGTTTTCACAAGAGCTGGAAAATCAAAACTGAAGAAGTCCTTTTTGAAGTAGAAATATT
GGTGTACAGTTTAACATGGAATTCGCATTTTTGCTGACTGAATTTTGAATTGTTTCTAGTGCCAAATAAGAATTTTAAGG
AGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTT
CTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCC
ATAAAAAATAGAATTAATGTGTTCTAACTTTTACAAAATTAAATTGATAATGTGAAGA-GAGGTTATTATAAAACAAGAA
AAAAAGGAGAAAATGTGGGG--AAAAAGGTGGATTCACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTGTAT
TAAACAAAACATTGTTTCTTTAGTAAAGTACCATATGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCAT
ATGAAATATAGCATGCTCCGGATGTTTGGCCTGATAGAAATATATAACTAAGCAACACGAATTTTGGGAACCAAGATTAA
AAAAATAAAATAGGAATAAGTGCAGTGTGGTTTCACCTTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAG
CTCAGCACAGGCTACATACACAGTTCTGGCACATGATCCTAGCAATTGGTACATTTCTACA
>chr1B_1
GTCCATCAAGATGAAAACGACTAAATGGAGAAAATCACTATGTTACTTGGGAAAACATATACAAAAGTTGCTTTCTGAGA
GATCTGTACAGCAAGTACACCATGTACGGCAACCATAC---------GTGATTACTCTTTTAGTAG--TTTTCTTCTTTT
GAACTTTGATTACTCGTTAAGTTTTACTACCCCACAACCCTGATGAAAGTTCTTGTTCCTGCGATTTGTCAGTTGCCATT
TCCCTCTCCTCGCC--G--CTTATTTCAACACCTGCACCCATCACCATACTCGTCTCGCCTCTCGCCATCCAAACCCTCA
CGTTTCTCTCGCGTCCCCTC-----GTCCCAGCTCCCAAAGCAAGCGAGC----AGCGCGCGACCAACCAAGCAGAAAGA
GACAGCCCGAAGCAGGAGCCGGCCATCCATTGACCTGCTAACTAGGCAATCCAAT--CCAAATCCCGTACCCTGAACCAG
AAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGGGAGGCTCAGCTAGGTGGCTTTTGCCCAGGTGAGCAGGAAACG
ACCCGCCCCGTGAAGAGAGCTTGGTGTC-----TTTCAACTTCTATTGGGTTGGGTTTGGACTTTGGAGAACAAGGTTGA
GCGGTTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTGCGGTTTCTGTCTGGCTGATCGTCTCCATGGGTGTATGTTCTGG
TCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAGATTGGTGCGTC-TTT-GCATTGGTAATTGATTGATCCAGTAGG
ATCTCATCTT-ATTTGAAAAGTGCATATCCCTTTTGCCTCTTTTGAAACCCCTTTAGTTTTCTTCTTTTGATGCCTTCAA
GGTTTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTGGTTGTAGAATAATGGCTCTTTTCCGCTGCTTT
CTGCACCTAGTCTTCTTCACAATCAGTGCTTCCAACTTCCAAGATCCGAGAGCTTGCCTTTACCGCAGTCTGAAACTGAT
TACTATAGTAGCTGAAAGGTTGCGCCTTTGATGCTGTCATGTTATTGCAGAGCAGGAGGGGGTCAAAGCAGAAGAAGCGC
GATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAAGGAGCGGGA---GGAGGAGCTGCAGGGGCCTGCACGGTCTCAGTCGG
CGCGTTCCAACAGCAGCATCTCCACGGACCGTGACGCGCGGCGGTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCG
GAGATCAGCGTCGAGTCCTTCGGCCGGTACAGGCAGCTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCAC
CTTCCACGAGCTCAAGAGCGCCACCCGGAGCTTCAGCCGTGCACTTATGATCGGTGAGGGCGGTTTTGGCTGCGTCTACC
GCGGCACCATCCGGAGCACCCTCGAGCCGCGCCGAAGCCTCGATGTCGCCATCAAGCAGCTCGGACGCAAAGGCCTCCAG
GTGACATTCTCTTTTTTTCCTCATGCATTGCTTCCAGCTCCACCCAACTCGGCATAAACATGGTGTCAGAGCTCATTCAT
GGAGGCGATCCGATCATCAACCCGAACAACCATCGGTAATCTGGATGGCTGGATCCAGATGATAACACCAATGCTTTGAT
TCGTCATCCAGGGGCATAAGGAATGGGTGACCGAGGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTC
ATCGGCTACTGCGCAGAGGACGACGAGAGGGGGATTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGC
TGATCACCTGTCAACAAGATCACCAAAGCCCGCTTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACAGCTCGTGGTC
TCAAGTACCTGCACGAAGATTCCGAATTCAAGGTAAGCTTCGTCATAGGCATGCGGCAACTCATTCAAATGCTATGATTG
C----TGAAAGATAAG-----ATCATAGAAGCATGACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATTGTC
TGCCATCTATGAATGTATTCTTCCAGATAATATTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAAC
GCGAAACTGTCGGACTTCGGCTTGGCTAGACTGGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCA
GCCAAAAAAGCCCATCTTCTTTGTCCAGCACCT-------GATGGCACTATCCTCAATTCCATGGCGCAATGCTGACATA
TTGAATAGCATACTGTAACTTTCAGAAGCAGCTTTGCAAG--TTCACCCAAGTATGATCAGTTCAGTAGGTACTAGGTAG
TCAGTAGCAAGAATAGTTCATATTGTGGCCTTCCGTACTTGTCAGACAAACCCAAAACTAGGAGTGGTTAAAAGAAA---
-CTCCACG---TGAATGGATGCTTAGCAGTCAGCAAGTA---------GATTATTGGCCTGTGAAATAAGAAATGGACAA
TACCATCATCCTAGATACACAAGCAGAACGAAGGGTAGGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGA
AGACCGATTAGGAAAGCCAGCTAGCCCTGCTGGTTGGTTGAAATCAGC---TAACTTTTCTGGCTGATTTCCAATTGTAG
TATTTTATCACATGTGATGATAAATTTCCGAGTAAAAGTAGCCTCTGTCTGTACATTAACTCTAGATACCTGACATTTCT
TACCTATAAAA-----AGTTAAGTTTCTCTTTTTATTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTC
CTGAGTATATCCATACGGGACGCCTCAGCAGTAAGAATGACATATGGAGCTATGGAGTAGTTCTCTACGAACTCCTCACA
GGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGGTGAACAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACAC
CAAGAAGTTTGAGACCATAATGGATCCAAGGCTCGAAGGGAACTACAACCTGAAATCGGCAGTCAGGATTGCCTCGCTGG
CAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACCTAAGATGAGCGAGGTGCTGGAGATGGTGCAGAAGATTGTCGAT
AGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAAGTCATTCAAAAGAATTGGCTAGTGATGAGAAAAAAAGGAAAGG
CCTTGATCTGAAGAGGAGGATCGCTGGTATTAAAGCTGGAGATGGTAGATGGCTTACATGGCACAAGTGGACACCCAAGC
TTGTGAGAACACAATGACTCAAAACATGGATGAGATGTTCCTCTTTATGACTTTGACATCCAGAGATATTTGCAAAAAAC
AGCAACGGCTGAAATGCCACTTGAGTTGCTGTTTACCATACAATTCAGAGAACATGATAACTAAAAACAGGAGATGT---
----GGCAAGCCTGATGCTATCATCACTAAATAATGGCTATGCCTGGGTTTGTGAGGTCACGCACAGGCAGTGTCCACTC
GCCACATAGTTCGGCATTACATGTTTTCACAAGAGCTGGAAAATCAAAACTGAAGCAGTCTTTTTTGAAGTAGAAATATT
GGTGTACAGTTTAACATGGAATTCACATTTTTGCTGACTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGG
AGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATTTTT
CTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCC
ATAAATAATAGAATCAATGTGTTATAACTTTTACATAATTAAATGGATAATGAGAAGAGGAGGTTATTATAAAACAAGAA
GAAA-GGAGAAAATGTGGGGGGAAAAAGGTGGATTCACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTTTATAT
TAAACAAAACATTGTTTCTTCAGTAAAGTACCATATGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCAT
AGGAAATATAGCATGCTCCGGATGTTTGGCATGATAAAAATATATAACTAAGCAACACTAATTTTGGGAACCAAGATT-A
AAAAATAAAATAGGAATAAGTACAGTGTGGTTTCACCTTTGAGCGCTATACACAACCAGAGATCTCGTTAACGGGCAAAG
CTCAGCACAGGCTACATACGCAGTTCTGGCACATGATCCTAGCAATTGGTACATTTTTACA
>chr1D_1
GTCCATCAAGATGAAAACGACTAAATGGAGAAAATCGCTATGTTACTTCGGAAAACATATACAAAGGTTGCTTTCTGAGA
GATCTGTACAGTGAGTACATCATGTACGGCAACCATACGCTCCACTGGTGATTACTCTTTTAGTAG--TTTTCTTCTTGT
GAACTTTGATTACTCTTTTAGTTTTACTACTCCACAACCATGATGAAAGTAATTGTTCCTGCGATTTGTGAGTTGCCATT
TCCCTCTCCTCGCCGTG--CTTATTTCAACACCTGCACCCATCACT---------------------ATCCAAACCCTCA
CGTTTCTCTCGCGTCCCCTC-----GTCCCAGCTCCCAAAGCAAGCAA------------CGACCAACCAAGCAGAAAGA
GACAGTCCGAAGCAGGAGCCGGCCATCCATTGACCTACTAACTACGCAATCCAAT--CCAAATCCCGTACCCTGAACCAG
AAGCAGCCGCGTCTTCTTCCTCCCAACCCCATGTGGGGGAGGCTCAGCTAGGTGGCTTT-GCCCAGGTGAGCAGGAAACG
ACCCGTCCCGTGAAGAGAGCTTCGTGTCTTTCATTTCAACTTCCCTTGGGTTGGTTTTGGACTTTGAAGAA---GGTTGA
GCAATTGGTTGGTCGGTTGTTGGCTTGAAAGATCTTGCGGTTTCTGTCTGCCTGATCGTCTCCATGGGTGTATGTTCTGG
TCCTGGTGGCTTCCTTTCGTCGACCGTCCTTGTTTAGATTGGTGCGTC-TTTTGCATTGGTAATTGATTGATCCAGTAGG
ATCTCATCTTTATTTGAAAAGTGCCAATCTCTTTTGCCTCTTCTGAAACCCCTTCAGTTTTCTTCTTTTGACGCCTTCAA
GGTT------------------------TCTCTCTCTCCCTCCTTCTGGTTGTAGAATAATGGC--------GCTGCTTT
CTGCGCCTGGTCTTCTTCCCAATCAGTG-------CTTCCAAGATCCGAGAGCTTGCCTTTACCGCCGTCTGAAATTGAT
TACTATAGTAGCTGAAAGGCTGCGCCGTTGATGCTGTCATGTTATTGCAGAGCAGGAGGG--TCAAAGCAGAAGAAGCGC
GATGCAGTGCTTCCGGTTCGCGAGCTGGGAGAAGGAGCGGGACAAGGAGGAACTGCAGGTGCCTGCACGGTCTCAGTCGG
CGCGTTCCAACAGCAGCATCTCCACGGACCATGACGCGCGGCGCTCGGGCTCAGAGTGCTGCTCGCTCACCGTCTCGTCG
GAGATCAGCGTCGAGTCCTTCGGCCGGTACCGGCAGTTGTCGCTGCCGCAGCGGCCCAACAATGACCTCCGCATCTTCAC
CTTCCAGGAGCTCAAGAGCGCCACCCGGAGCTTCAGCCGTGCACTCATGATCGGCGAGGGCGGTTTTGGCTGCGTCTACC
GCGGCACCATCCGGAGCACCCTCGAGCCGCGCCGAAGCCTTGATGTTGCTATCAAGCAGCTCGGACGCAAAGGCCTCCAG
GTGCCATTCTCTTCTTTTCCTCATGCATTGCCTCCAGCTCCAGCCAACTCAACATAAACATTGTGTCAGAGCTCATCCAT
GGCGGTCATCCGATCATTGACCCGAACAACCATCCGTAATCTGGATGGCTTGATGCAGGTGATAACACCAATACTTTGAT
TCGTCATCCAGGGACATAAGGAATGGGTGACCGAGGTGAACTTTCTTGGGGTGGTGGATCATCCCAACCTGGTGAAGCTC
ATCGGCTACTGCGCAGAGGACGACGAGAGGGGGATTCAGTTGCTGCTCGTCTACGAGTTCATGCCTCACGGAAGCCTAGC
TGATCACCTGTCAACAAGATCACCAAAGCCTGCTTCATGGGCAATGAGGCTGAGAGTAGCACTCGACACTGCTCGTGGTC
TCAAGTACCTGCACGAAGATTCTGAATTCAAGGTAAGCCTCATCACAGGCATGCAGTAACTCATTCAAATGCTATGATTG
C----TGAAAGATACTGTAACATCATAGGAGCATGACCTATTTTAGAGTCTCTTGCCTTTTACCCAGTCCTGATATCATC
TG-CATCTATGAATATGTTCTTCCAGATAATATTCCGTGATCTGAAGCCTTCAAACATCCTGCTCGACGAGAACTGGAAT
GCAAAACTGTCGGACTTCGGCTTGGCTAGACTGGGGCCGCAAGAGGGAAGCCATGTTTCAACAGCGGTATGTAACGAGCA
GCCG--AAAGCCCATCTTCTTTGTCCAGCACCC-------GATGGCACTATTCTGAATTCCATGGCGCAATGCTGACATA
TTGAACAGCATACTGGGACTTTCAAAGACAGCTTTGCGAGTTTTCACCTAAGTATGATCGGTTCAGTAGGTACTTGGTAG
TCAGTAGCAAGAATAGTTCATATTGTGGCCTTTCGTACTTGTCAGACAAACCGAAAACCAGGAATGGTTAAAAGAAA---
-CTCCTCGACATGAATGGATGCTTAGCAGTCAGCAAGTACTTTTAAAAGATTATTGGCTTGTGAAATAAGAAATTGACAA
TACCATCATCCTAGATGAACAAGCAGAACAAA-GGTAGGCAGTTAGGCACTTCCGGGTTAGTCAACATGCTAGTGCAGGA
CGACCGGTTAGGAAAGCCAGCTAACCCTGCTGGTTGGTAAAAATCAGCTAGTAACTTTTCTGGCTGCTTTCCAATTGTAG
AATTTGATCACATGTGATGATAAATTTCCAAGTAAAAGTAGCCTCAGTTTGCAGCTTAACTCTAGATACCTGACATTTGT
TACATATAAAAGGTAGAGTAAAATTTCTCTTTTCATTTGACATACCAAACAGGTGGTGGGTACTATAGGGTATGCAGCTC
CTGAGTATATCCATACAGGACGCCTCAGCAGTAAGAATGACATATGGAGCTATGGAGTGGTTCTCTACGAGCTCCTCACA
GGCCGGCGGCCTCTGGACCGGAACAGGCCGAGGGGTGAGCAGAACCTTGTGGAATGGGTGAAGCCCTACTCCTCCGACAC
CAAGAAGTTGGAGACCATAATGGACCCAAGGCTTGAAGGGAACTACAGCCTGAAGTCGGCAGCCAGGATTGCCTCGCTGG
CAAACAAGTGCCTGGTGCGCCATGCAAGGTATAGACCTAAGATGAGTGAGGTGCTGGAGATGGTGCAGAAGATTGTCGAT
AGCAGTGACCTTGGAACACCAGAGCATCCCCTGATAAGCCATTCAAAAGAACTGGCTAGTGATGAGAAAAAAAGGAAAGG
CCTTGATCTGAAGAGGAGGATCGCAGATATTAAAGCTGGAGATGGTAGATGGTTTACATGGCACAAGTGGACACCCAAGC
TTGTGAGAACACAATGACTCAAAATATGGATGAGATGTTCCTCGTTATGACTTTAACATCCAGAGATATTAGC-AAAAAC
AGCAACAGCTGAAATGCCACTTGAGTTGCTGTTTACCATACAATTCAGAGAACATGATAGCTAAAAACAGGCGACTT---
----GGCAAACCTAATGCTATCATCACTAA--------------------------------------------------
-----ATAGTTCAGCATTACATGTTTTCACAAGAGCTGGAAAATGAAAACTGAAGCAGTCCTTTTTGAAGTAGAAATATT
GGTGTACAGTTTAACATGGAATTCGCATTTTTGCTGACTGAATTTTGAGTTGTTTCTAGTGCCAAATAAGAATTTTAAGG
AGGTGCATGTAGCTTATTGGTTCCTGTGTTTGCAAGATTTGCACCCTGTATGCATCTCTCTGATGAACTTAATTATCTTT
CTGCACTGACACAGCTGATATGTAAAGTTCCCTTTTCAGTACTAGATCAATTGGGAGGTAGAATTTGCCTGTGTATATCC
ATAAAAAATAGAATCAATGTGTTATAACTTTTACATAATTAAATTGATAATGAGAAGATGAGGTTATTATAAAACAAGAA
AAAA-GGAGAAAATGTGGGGGAAAAAGGC-GGATTCACAGGTCATGTTATTTTGCTAACTGCTCTTTGTGTACTCTATAT
TAAACAAAACATTGTTTCTTTAGTAAAGTACCATATGACTTTCAGGAAAATAATTTCACTATTCATAGCACAAATCGCAT
ATGAAATATAGCGTGCTCCGGATGTTTGGCATGACAAAAATATATAACTAAGCAACACTAATTTTGGGAACTAAGATT-A
AAAAATAAAATAGGAATAAGTACAGTGTGGTTTCACCTTTGAGCGCTATACACAACCAGAGATCTGGTTAACGGGCAAAG
CTCAGCACAGGCTACATACGCAGTTCTGGCACATGATCCTAGCAATTGGTACATTTTTACA
>SNPs
--------------------------------------S--------------------------S--------------
----S-S-------------------------------------------------S----S----SS------------
----------------------------------------------S---------------------------------
-----------------SS--------------------------S----------------------------------
--------------------SSSSS-------------------------SSSS----S------------S--------
----------------S--------------------------------------SS-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-------------------------------S--------
------------------------------------------------S---------S---------------------
----------------------------------------------------S---------------------------
----------------------------------S-------------------SS-S---SSSSS--------------
------------------------S-------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------S-----------------------------------------S
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S----------------------------S------------------------------
------------------S-------S--------S-------------------------------------S------
---------------------------------------------------------S----------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
SSSSS---------------------------------------S-----------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------SSSSSSS----------------------------------------
----------------------------S---------------------------------------------------
-----------------------------------------------------------------------------SSS
S-----------------------------------------SS------------------------------------
--------------------------------------------------------------S------------S----
----------------S-----------------------------S---------------------------------
S-------------------S------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------S-----------------------------------------------------
------------S------------------------------------S------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------SSS
SSSS---------------------------------------------------------------------------S
-------------------------------------------------------S------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S--------S-----------S----------------S---------------------------
----S-----------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------------------------------S-----S---------------------S-------------------S-
---------------------S----------------------------------------------------------
-------------------S------------------------------------S----
>forward_853
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---------------------------------TTGCCTCTTCTGAAACCCCG---------------------------
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>reverse_2260
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-------------------ATTGTCCAGCACCTGATGGG-----------------------------------------
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>forward_1738
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AACTTTCTTGGGGTGGTGGG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_3519
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GC
AAGCGGCAAGCCTAATG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
