>input_sequence_35171
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--------------------------------------ATGGCGACTGCGGGCCTGCTGCGGAGGGAGAGGGAGCAGTTC
GGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACGACATTGGCGCCACCAAGGT
ACATACATGGCTTGTTAA-----CAATGACAAAACTCGATGGTGCGTGGACGTAATTGGAGTAAAATTGCCAATTCGATG
GAGTTATTACTCATGTAGTA-TTACATACTCCCTCCATTCCACAATGTAGTGCTTCCTCTATCCCCGTGCTTCAACTTTG
ACCGCCAATTTAACTACCAAGACCGATTGCGACGGGAGCAAAAATTATATCAGTGAATTCGTATTCAAAAGAAGTTTTCA
ATTATATATTTTTTTCTCCCGCCGCAGTTGGTCTCGTTGGTTAAACTTATGGTCAAAGTTGGACCTCGAAAAGCGTGGGC
GCACTATATTTTGGAATGGAGGGAGTACAGTTGCAGTTGATTAATTCGTGTGCATCAGGAATCTGCTGCTGCTTATTAAC
AAATGCCAAAACGCACCGTATACAAT--ATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACGACCGCCTGCT
GCTGGAGCTGGTCCCCCGTCTTGGCGCTGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAATCAATCAGTCA
GTCAGTCAAACATACAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTGTACTACTATGTATATTCTGATCGAGATCG
ATCATGTGCATGCGCGCATGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTGCTGCTGCATG
GGATGTCTTCAGGACCATCGACATGGATGTTCAGGTACGCCACCATATAC-----TAGAATACAGT-----ATATACCAG
GCCTAAATGCATGGATGCAGAGATAAATTATA---CCAAGATGTGTGTCTTATCTTCATGTGTCATTTACAGTTGACAAA
TTTTAATGGTGTATAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAACAGTCGTTTGGACG
AAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATTGATCGCCACACTAGAGAAGTTATCAAGAGGAACTTCCTGCCT
GACCTGCTTCGGATGTACGAAGTATGTGTACTGTCTTGTGTTTTCTTCTGAACCTACGTTTTCTGAATCAAATTTATACT
CTCTCCGTCCCAAAATAAGTCTCAACTTTGTATTAAATTTTGTCTTAACTTTAGTACTCCCTCCATTTCAAAATATAGTG
TGCCCACATTTCCCGAGGTTCAACTTTGACCATAAATTTGAACAACGAGACCGACTGCTGCAGGAGCAAAAATTATACAA
TTGAAAAGTTCTTTTGAATATGAATTCATTGGTATGAATTTTGCTACCGCCGCAGTTGGACACGTTGGTTAAATTTATGG
TCAAAGTTGAAGTGCGGAAACCAAGGACGCACTATATTTTGAAACGGAGGGAGTACAGTTTTATACTAAGTTTAGTATAA
AATTGAGACACTTATTTTGAGACGGAGGAAGTACAATGTATTTTCAGCTCTGTGCGTGAATATAT---------------
---AACACATGTAGCTAGTGTTCTTTGAAAACTATGAAATCTTTGGGCAATATTAT-CAAAGTAATTGCAGCAGTTACCC
AACTGGAATAACC-AC----------------------------------------------------------------
-------------------------------------AGTAGTTACCCAACTGGACAGC---------------CATGTC
TATATGAAAAAACTGGAAGCCATGTGCATATTTCTATGTCAGTGTTGATTCCCTGGTTGTTTAGTACAGC----------
-------------------------TAGCATTAAAGTGTCCCCAATTCAATTTTATAGGAACGAGTGAGGGCCTTCATCC
AAGACACGAGGG---------ACTTGCTTGCGCTGGATGTCCAGGACCCGTTCCAGAGGCTGCTCCTACACGGCGTGTGC
GAGGTAACTAAAAACAACTGACGAAAGCCCTGTAGAAGTAAGAAGATGACCTGTC----------------------GAT
CGCCACTTCTTAATTTGCATA---CGCAGCTTCCTGGGCTATAGCTAATTACCTATAGGTAGCGTCGATCAATTTTGAAG
GCTAGACTACTTGTATTGTATCGATCACTCAGCACTC-ACTTGATTTGTATGCTTGCAGTTCTACAATGTGGCATCTGAG
ACGACGAGCAGCACAGTGAGAGAGTACGGCGGGGACAGGCTGTGGAAGACGACGACGATCAGGAAGAGATCGGGCACGGG
CGCTCCACCCAGGATCACCTTGGTTGACTTCCTGACAAGGAAGAAGAATGGATGCCACTGA-------------------
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>chr4B_1_TraesCS4B01G133900
ATTTGAAATTGTGAACAAAATTTTGAGAATGCGAACATTTTTTGAAATTGTGAACAAAATTTTGAAAATGAGAACATTTT
CTGAAATTCCTGAACTTTTTT-GGAAAATGTGAACAAATTTTTAAAAAGAGAATACCTTTTGAAATTCCTAAACATTTTT
GGGAAAATGTGAACAAATTTTGGAAAAAGGAACACTTTTGAAAATTTTGAACAATATTTAAAG--TTTTAACAAAATAAA
CAGGAAAACCAAAAAACAATAAGAGGAAATAAAAGAAAAGAAACTGGAAAAGGGAAAAATAAAGAAA---AAAGAAAAAA
GAAGAAAAAAGGAAAACCGAAAAACACCAGAAGTAGAAAATCAGAAAGAAAAACCCGGCTCAGGAACCTT-TAGAAGGTT
CCCAAAACCAGTGGAAGTACTCTACAGAAAAAGAAAACTTCGC------TGGGCCGGCCCACTGCATCGTTCGCTCTGGC
AACCC-GTGCGAACCATCGACATTTCGACGCATAGAGCGCCGCATAGGGTTTTCCCGTCGGTCCGCCCTCTCCTCGCCGC
TGTCACTTCCTAACCGGGCCTGGCTTAGGTGCGTGTGGGTGTGCGCATTTGCTCACTATTCCGCGCATTACACTAGGAAA
AAGGATTTGCCGTAAACAAGACCCACCACGATTTTTTTTCGT--TATCATCCTTCTCTGTTTTTTTT-------------
AGGGGTGTCATCCTTCT---------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------CTGGTGAGACAGGCTCGGATTTGTTATGAATTCATATGCG-GCCCAGTACGTATCCGTGCC
GGTTCCGACGTTCCGTGGTCCTCAATCAACCTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCAATCTACCAAAC
CAAACGTGCGCATATAGGGGCCCGGTCGCACCACACTACTCCGCTGCGCCCGCTCTGTCCCGCCGTCTCCGTCTCCGGCC
ACCGAAGCCCTTCCTTC--GCCTGAAAAAGAGAGAGAGAGAGAGA-----------------------------------
---------GAGAGAGCGACAGTTCGTACCAAGGATCCATGGCGACTGCGGGCCTGCTGCGGAGGGAGAGGGAGCAGTTC
GGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACGACATTGGCGCCACCAAGGT
ACATACATGGCTTGTTAA-----CAATGACAAAACTCGATGGTGCGTGGACGTAATTGGAGTAAAATTGCCAATTCGATG
GAGTTATTACTCATGTAGTA-TTACATACTCCCTCCATTCCACAATGTAGTGCTTCCTCTATCCCCGTGCTTCAACTTTG
ACCGCCAATTTAACTACCAAGACCGATTGCGACGGGAGCAAAAATTATATCAGTGAATTCGTATTCAAAAGAAGTTTTCA
ATTATATATTTTTTTCTCCCGCCGCAGTTGGTCTCGTTGGTTAAACTTATGGTCAAAGTTGGACCTCGAAAAGCGTGGGC
GCACTATATTTTGGAATGGAGGGAGTACAGTTGCAGTTGATTAATTCGTGTGCATCAGGAATCTGCTGCTGCTTATTAAC
AAATGCCAAAACGCACCGTATACAAT--ATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACGACCGCCTGCT
GCTGGAGCTGGTCCCCCGTCTTGGCGCTGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAATCAATCAGTCA
GTCAGTCAAACATACAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTGTACTACTATGTATATTCTGATCGAGATCG
ATCATGTGCATGCGCGCATGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTGCTGCTGCATG
GGATGTCTTCAGGACCATCGACATGGATGTTCAGGTACGCCACCATATAC-----TAGAATACAGT-----ATATACCAG
GCCTAAATGCATGGATGCAGAGATAAATTATA---CCAAGATGTGTGTCTTATCTTCATGTGTCATTTACAGTTGACAAA
TTTTAATGGTGTATAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAACAGTCGTTTGGACG
AAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATTGATCGCCACACTAGAGAAGTTATCAAGAGGAACTTCCTGCCT
GACCTGCTTCGGATGTACGAAGTATGTGTACTGTCTTGTGTTTTCTTCTGAACCTACGTTTTCTGAATCAAATTTATACT
CTCTCCGTCCCAAAATAAGTCTCAACTTTGTATTAAATTTTGTCTTAACTTTAGTACTCCCTCCATTTCAAAATATAGTG
TGCCCACATTTCCCGAGGTTCAACTTTGACCATAAATTTGAACAACGAGACCGACTGCTGCAGGAGCAAAAATTATACAA
TTGAAAAGTTCTTTTGAATATGAATTCATTGGTATGAATTTTGCTACCGCCGCAGTTGGACACGTTGGTTAAATTTATGG
TCAAAGTTGAAGTGCGGAAACCAAGGACGCACTATATTTTGAAACGGAGGGAGTACAGTTTTATACTAAGTTTAGTATAA
AATTGAGACACTTATTTTGAGACGGAGGAAGTACAATGTATTTTCAGCTCTGTGCGTGAATATAT---------------
---AACACATGTAGCTAGTGTTCTTTGAAAACTATGAAATCTTTGGGCAATATTAT-CAAAGTAATTGCAGCAGTTACCC
AACTGGAATAACC-AC----------------------------------------------------------------
-------------------------------------AGTAGTTACCCAACTGGACAGC---------------CATGTC
TATATGAAAAAACTGGAAGCCATGTGCATATTTCTATGTCAGTGTTGATTCCCTGGTTGTTTAGTACAGC----------
-------------------------TAGCATTAAAGTGTCCCCAATTCAATTTTATAGGAACGAGTGAGGGCCTTCATCC
AAGACACGAGGG---------ACTTGCTTGCGCTGGATGTCCAGGACCCGTTCCAGAGGCTGCTCCTACACGGCGTGTGC
GAGGTAACTAAAAACAACTGACGAAAGCCCTGTAGAAGTAAGAAGATGACCTGTC----------------------GAT
CGCCACTTCTTAATTTGCATA---CGCAGCTTCCTGGGCTATAGCTAATTACCTATAGGTAGCGTCGATCAATTTTGAAG
GCTAGACTACTTGTATTGTATCGATCACTCAGCACTC-ACTTGATTTGTATGCTTGCAGTTCTACAATGTGGCATCTGAG
ACGACGAGCAGCACAGTGAGAGAGTACGGCGGGGACAGGCTGTGGAAGACGACGACGATCAGGAAGAGATCGGGCACGGG
CGCTCCACCCAGGATCACCTTGGTTGACTTCCTGACAAGGAAGAAGAATGGATGCCACTGAA-ATTTCATTTTGTGATCA
G-----GCACCTTCTTTCCTTT-AGATCAGGCACGGGCGCTCCATCCAGGAAGAAGTGGTTGTGCTTGATTTGTAGTACT
ACTCCCTCCGTCCGAAAAAGCTTGTCCCTTAAATGGATGTATCTAGCATCAAGTTAGTGCTAGATACATTCATTTGAGAG
ACAAGTTTGGGACAAGTTTTATCGGACGGAGGGAGTACTAGTATGCCAGCTAGCAATCTAT---------ACTCCTTAAT
TTGAAGTGCTACTCAATCAGTGGAGTAGTA-GCGTACTATTTGATGGTTAA-----TATATGACACTTACTAGCTGTACT
ATGATTGTCGGTCTTTGTCGTTTCATACATGGATCGATCTCGGTTGTAG------------TAGCTGCTACACGACCGCA
CTGCTGGCAATAGTCTTTACTCCTACATCAGTGATTACCTAAATGGTCTGCGTTCACATGGCGTACTGCCTCTGCTGC--
----------TGCTGTTTTCTGTTTTCGAGG---------------------------TCAGTGTACGCGTATGAGGCCC
GCGATATCCTCCGAGGCCCTTTTGAGAGGCTGGAAACAGAGGATAGACTGGACCAACTGGGCTCTCGAGTGTAAACGATA
GATGACGAAGGCCGAAATTGGTTGTGCAGAATTTGGAAGCACACTCAAGGTAATGGGTATGGTCTCTTCGGTATTTTTTT
TGTTCTTTTTAACGGTGAGAAGCTTGAGCCTTTCAGACCAACCAAAGAAATCCGACAGGGAGACCCAATGAAGACCCAAT
TTTCCCCTACTTATTCTTGACTGCAGCAGAGGGTCTTTCGTGCCTCTTGAAATCCAGTTCACAGTCATCACTTGCAGGTA
TTAAGGTGGCTCCGACAACTCCATCCATAAATCACCTTTTGTTTGCAGATGAGAGTCTGCTGCTTTTTAAGGCTAGCGTA
GAGGGATCGGTTGCAGTGTCAAACCTATTGAACACTTATTGCAATGCATCAGGATAGCGTATTAACCATGATAAGTCATC
AATTTTCTTCAGTC
>chr3B_1
ATTTGAAAATTTGAACAAAATTTTGAGAATGCTAACATTTTCTGAAATTGCGAACAAAATTTTGAAAACAAGAACATTTT
TTGTATTTCCTGAACTTGTTTCGGAAAATTTGATCAAATTTTGAAAAAGAGAACACTTTTTGAAATTCCTAAACATTTTT
TTGAAAATGTGAACAAATTTAGGAAAAGAGAACAATTTTTGAAATTCCAGACAAATTTTGAAATTTTTGAACAAAATAAA
CAGGAAAATGAAAAAAG---------------AAAAAAAGAAACAGGAAAAATGAAAAAAAAAGAAAGAAAAAGGAAAAA
AAGGAAAAAAGAAAACACGGAAAACACCAGAAGTAGAAAACCAGAAAAAAAAAG--GGTTCAGGAACCTTCTAGAAGGTT
CCCCAAACCGGTAGAAATACTCTACATAGAAAGATAACTCACCAACAATTGGGCCGGCCCACTGCATCGTTCGCTCTCGC
AACCCTGTGCGAACCATCGACATTATGACGCAAAGAGCGGCACATAGGGTTTTCC-------------------------
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>chr4D_532
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-----------------------------------------------------------------CCCTCTCCTCGCCGC
TGTCACTTCCTAACCGGGCCAGGCTTAGGTGCATGTGGGCGTGCGCATTTGCTCACTATTCCGCGCATTACACTAGGAAA
AAGGATTTGCCGTAAAGAAGGCCCACCATGATTTTTCTTCGTTATATCATCCTTCTCTGTTTTTTTATTTTTGATTGATG
AGGGGTATCATCCTTCTTCTCTCGTGAGTATACCTGGCCATACCTCGGGCCGGGCCTAGCCAAGCCCGACGCAAAAAACC
CAGGCCTGAGCCCGGCCCGGCCGTCGGGCCTGTTTTTTGGGCCCGAGCCCGGCCCGAACACGTAAAAGCCCGTCCGGCTT
CGGGCCGTCCCGGCCCGTCCTTCAGAAAAACGCGAAAACGATGGGCCCGGGCTCGGCCCGGCCCGGTCTTCGGGCTCAAA
ATCTAGGCCCGAGCCCGGCCCGGGAGCGGTGTCGGGCTGGGCCGGGTCAGGCTTTTTCGGGCCGGGCCGTTCGGGCCGGG
CTGCCCATGGCCAGGACTACTGGTGAGACAGGCTCGGATTTGTTATGAATTCATAGGCG-GCCCAGTACGTATCCGCGCC
GT--------TTCCGTGGTCCTCAATCAACGTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCAATCTACCAAAC
CAAACGTGCGCATATAAGGGCCCGGTCGCACCACACTACTG-GCTGCGCCCGCTCTGTCCCGCCGTCTCCGTCTCCGGCC
ACCGAAGCCCTTCCTTCTCGCCGGAAAAAAGAGCGC-------GA-----------------------------------
---------GAGAGAGCGACAGTTCGTGCCAAGGATCCATGGTGACTGCGGGCCTGCTGCGGAGGGAGAGGGAGCAGTTC
GGCTCTTCCCCCTTCACTGGACAGACGATGATCGAAAGCAAGATCCAGGCCCTGGAAGACGACATTGGCGCCACCAAGGT
AC--ACATGGCTT-----GTTAACAATGTCAAAACTCGATGGCGCGTGAACGTAATTGGAGCAAAATTGCCAATTCGATG
GAGTTATTACTCATGTGGTA-TTACATAC---------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------AGTTGCAGTTGATTAATTCGTGTGTATCAGGAATCTGCTG---CTAATTAAC
AAATGCCAAAACGCACCGTATATAAC--ATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACGACCGCCTGCT
GCTGGAGCTGGTCCCCCGTCTTGGCGCCGACGAGATCAAAGGCCTCTTCGCTCCGCCACCGTGGGGTAATCGATCAGTCA
GTCAAACAAATAT--AAATTCTGGTCCATAGCGGACCTCACAGCTCAGTTGTAGTACTATGTATGTTCTAATCGATCATG
CGCATC--------CGCATGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTGCTGCTGCATG
GGATGTCTTTAGGACCATCGACATGGATGTTCAGGTATGCCACCGTATAC-----TAGTAGAATACAGTACATACACCAG
GCCCAAATGCATGCGTGTAGAGATAAATTATA---CTAAGAGGTGTGTCTTATCTTCATGGGTCATTTACAGTTGACAAA
TTTTAATGGTGT-TAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAACAGTCGTTTGGACG
AAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATTGATCGCCAGACAAGAGAAGTTATCAAGAGGAACTTCCTGCCT
GACCTGCTTCGGATGTACGAAGTATGTGTACCGTCTTGTGTCT---------CCTATGTTTTCTGTTTTCCCAACCAAAT
ATAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------AGTACGTACAGTGCATTTTCAGCTCTGTGTGCGAACATGCTTAGGAAGA---TAG
TACAACACATGTAGCTAGTGTCCTTTGAAAACTCTGAAATCTTTCAGCAATGTTACCCAAAGTAACTGCATTAGTTACCC
AATTGGAGTAAATTATACTCCCTCCGTCCCAAAATAAGTGACTCAATTTTATACTAACTTTGTAACCTTACAAAGTTAAT
ATAAAGTTGAGTCACTTATTTTGGGGACGGAGGGAGTAGTAGTTATCC--------------------------------
----------AACTGGAAGCCATGTGCATATTTCTGTGTCAGTGTTGATTCCATGGTTGTTTAGTGTAGGGTTTTTTTTT
CAGGGAGGTTGTTTAGTATACTAGTTAACATTAAAGTGTCTCGGATTCAATTTTGCAGGAACGAGTGAGGGCCTTCATCC
AAGACACGAGGGGCGACAAGGACTTGCTTGCGCTGGATGTCCAGGACCCGTTCCAGAGGCTGCTCCTACACGGCGTGTGC
GAGGTAACTAAAAACATCTGACGAAAGCCGTGTAAAATTTAAGACTTGACCTGTCCATCATGAAGGATACTTTGCTTGAT
CGCCACTTCATAATGTGCATAGTACGCAGCCTCCTGCGCGGCAGTGTACTAC------GTAGCGTCGAACGATTTTGAAG
GTTAGCCTACCTGTATCAATCAATCA---AAAATAAGAACTTCATTCGTATGCCTGCAGTTCTACAATGTGGCATCTGAG
ACGAGGAGCAGCACCGTGAGAGAGTACGGCGGGGACAGGCTGTGGAAGACGACGACGATCAGGAAGAGATCGGGCACGGG
CGCTCCACCCAGGATCACCTTGGTTGACTTGCTGACAAGGAAGAAGAATGGGTGCCACTGAATATTTCACTTTGTGCCAC
TAG-TAGCACCTTCCCTCA--T-AGATCAGGCACGGGCGCTCCATCCAGGAA--AGTGTTTGTGCTTGATTT--------
--------------------------------------------------------------------------------
----------------------------------GTACTAGTATGCCAGCTAGCAATCTACACTACTAGCACTCCTTAAT
TTGCAGTGCTACTTAATCACTGGAGTAGTAAGCT---TATTTGGTGATAAA-----TATATGACAC-TACTAGCTGTACT
ATGATTGTCGGTCTTTGTCGTTTCATACATGGATCGATCTCGGCTGCAGTA-----------------------------
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>chr4A_695
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---GGTATCATCCTTCT---------------------------------------------------------------
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-------------------CTGGTGAGACAGGCTCGGATTTGTTATGAATTCATAGGCGGGCCCAGTACGTATCCGTGCC
GT--------TTCCGTGGTCCTCAATCGACCTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCAATCTACCAAAC
CAAACGTGCGCATATAAGGGACCGGTCGCACCACACTACTC-GCTGCGCCCGCTCTGTCCCGCCGTCTCCGTCTCCGGCC
ACCCAAGCCCTTCCTTCTCGCCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGG
AGGGAGAGGGAGAGGGAGAGAGTTCGTGCCAAGAATCCATGGCGACTGCGGGCCTGCTGCGGAGGGAGAAGGAGCAGTTC
GGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACCACATTGGCGCCACCAAGGT
ACGTACATGGTTTGTTAAGTTAACAATGTCAAAACTCGATGGCGCGTGAACGTAATTGGAGCAAAAGTAACAACTCGATG
GAGTTAACACTCATGTAGTATTTACATAC---------------------------------------------------
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----------------------------AGTTGCAGTTGATTGATTCGTGTGCGTCAGGAATATGCTG---CTTATTAAC
AAATGCCAAAACGCACCGTATATGAATAATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACGACCGGCTGCT
GCTGGAGCTGGTCCCCCGTCTTGGCGCCGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAATCCA----TCA
GTCAGTCAAACAAATAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTCTAATACTATGTATATTCTGATCGATCATG
TGCATGCGCATGCGCGCTTGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTGCTGCTGCATG
GGATGTCTTCAGGACCATCGACATGGATGTTCAGGTATGCCGCCATATACTGGAGTAGAATACAGT-----ATATACCAG
GCCCAGATGCATGGATGCAGAGATAAATTATAGTACTAAGATGTGTGTCTTATCTTCATGGGTCATTTACAGTTGACAAA
TTTTAATGGTGTCTAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAGCAGTCGTCTGGACG
AAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATCGGTCGCCAGACAAGAGAAGTTATCAAGAGGAACTTCCTGCCT
GACCTGCTTCGGATGTACGAAGTATGTGTACCGTCTTGTGTCTTCTACTGAACCTATGTTTTCTGTTTTCTCAACCAAAT
ATAT----------------------------------------------------------------------------
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-------------------------AGTACGTACAATGCATTTTCAGCTCTGTGTGTGACCATGCTTAGGAAGATAGTAG
TACAACACATGTAGCTAGTGTCCTTTGAAAACTCTGAAATCTTTCAGCAATGTCACCCAAAGTAACTGCAGTAGTTACCC
AATTGGAGTAAATTAC----------------------------------------------------------------
-------------------------------------AGTAGTTATCCAACTGGAAGCCATGTGCGGATGTGCGCATGTC
TATATGAAAAAACTGGAAGCCATGTGCATATTTCAGTGTCAGTGTTGATTCCATGGTTGTTTAGTATAGT-TTTTTTTTG
CGGGGAG----------------GTTAACAGTAAAGTGTCTCGGATTCAATTTGGCAGGAACGAGTGAGGGCCTTCATCC
AAGACACGAGGG---------ACTTGCTTGCACTCGATGTCCAGGACCCATTCCAGAGGCTGCTCCTACACGGCGTGTGC
GAGGTAACTAAAAACATCTGACGAAAGCCGTGTAAAATTCAAGACTTCATAATTTGGACAG------------------T
CGCCACTTCATAATTTGGA--------------------------GTACTAC------GTAGCGTCGATTGATTTTGAAG
GCTAGCCTACTTGTATCAATCATCAATCTAAAATAAGAAGTTAATTTGTGTGCCTGCAGTTCTACAATGTGGC-------
---AGGAGCAGCACCGTGAGAGAGTACGGCGAGGACAGGCTGTGGAAGACGACGACGATCAGGAAGAAACCAGGCACGGG
CGATCCACCCAGTATCACGTTGGTTGACTTCCTGACAAGGAAGAAGAATGGGTGCCACTGAA-ATTTCATTTTGTGCCAC
TAGCTAGCACCTTCCTTCCTTTGAGATCAGGCACGGGCGCTCCATCCAGGAAGAAGTGGTTGTGCTTGATTT--------
--------------------------------------------------------------------------------
----------------------------------GTACTGGTATGCTAGCTAGCCATCTAT---------ACTCCTTAAT
TTGAAGTGCTACTTAATCACTGGAGTAGTA-GCT---TATTTGATGATTACTACAGTATATGACAC-TACTAGCTGTACT
ATGATTGTCGGTCTTTGTCGTTTCATACATGGATGGATCTGGGTTGTAGTACTACGCACACTAGCTGCTACACGACCGCG
CTGCTGGCAACAGTGTTTAC------ATCAGTGATTAAGTAAATGGTCTGCGTATACATGGCGTACTGCCAACGTACTAC
TGTACGTGCTTGCTGTTTTCTGTTTTTGAGGTCAGTGTACGAGTCCCGAATAAAAAGATCAGTGTACGCGTATGAGGCCC
GCGTATCCTCGGAAGGCCCTTTTGAGAGGCTGTA---AGAGGAGAGACTGGACCAGCTGGGCTCTCGAGTGTAAACG-TA
GATGACGGAGGCCGA-----------------------------------------------------------------
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--------------
>SNPs
--------S-S---------------------S--------S--------S-----------------SS----------
S--S-S-----------S-----------S---S--------S----------S--S-----------------------
SS------------------S------SS-----S----SS-----SSSS----SS---S--S-----S-----------
--------SS------SSSSSSSSSSSSSSSS--S---------S------SS------S--------------S-----
S-S--------S---SS--S--------------------S------S-----SSS--S---------------------
---S-----S--S---S---------S-S-----S----SSS-----------------------------------S--
------------------------SS------S------S-S-------------SSSSSSSSSS---------------
--------------------S-----------S------S----------------------------------------
----------------S---S-------S-------S-----------------------------S-------------
------S-------------------------------------------------------------------------
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-------------------------------------------------------S------------------------
-SSSSSSSSS----------------------------------------------------------------------
----------------S------------------------S--------------------------------------
----------------------S---------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--S-------------------------S-------------S-----S------------S------------------
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------SSS---------
----------------------S--S------------------------------------------------------
---------------------------S-------------------------------------------S--------
--------------S--------------------------------------S---------------------SSSS-
SS----S-------------------------------------------------------------------------
-------------------------------------S------------------------------------------
---S--------------------------------S-----------------------S-------------------
------------S-------------------------------------------------------------------
----------------------------------------------S--S------------------------------
-------------------------------S---------S----S---------S--------SS-SSSSSSSSS-S-
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--S-S--------S---------------S-----S--SS---------------
---------------------S-----------S----------SS-----S---S---------S-----S--------
--S----S---SS-------------------------------------------------------------------
---------------------------------------------S---------SSS----------------------
-----------------------------------S----------------S-------------S--S----------
---------------------------S------------S-SS----------SS------------------------
--------------------------------------------------------------------------------
----------------S------------S----S--S-S-SS-SS----------------------------------
---------S--------------------S-----S--SSS--SSS-S---SSSSSS------------S---------
-----S----------SSSSSSSSSSS--S-SSSSSS-----S----------S--------------------------
----S---------S-----------------------------------------------------------------
---------------------------------------------------S------------------------SSSS
S-------------S---------------------------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
-------------S-----S-------------SSSS---------S-------------------S-------------
-------------------------------------------------------------------------------S
----------S---S-----SSSSSS-----------SS--------------SS---------------SSS-SSSS--
--------------------------S-----------------------------------------------------
---SSSS-SSSSS-------------------S-SSS------S-----------S---------------------S--
-------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_1242
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-----------------------GGTCGCACCACACTACTCC--------------------------------------
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>reverse_3415
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------------------------------------------------------ATAGGAACGAGTGAGGGCCT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>forward_1668
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGTGCTTCCTCTATCCCCGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>reverse_3563
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AAGATGACCTGTCGATCGCC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>forward_1674
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TCCTCTATCCCCGTGCTTCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>reverse_3765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CGAGCAGCACAGTGAGAGAG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>forward_2742
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CCCACATTTCCCGAGGTTCA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>reverse_4568
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAGGCCGAAATTGGTTGTGC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
