>input_sequence_35111
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--ATGGTGCGGATTGAGCGGTGTGGTGGTAATTGCAGGTCGAGGTCCAACCTCTCCGCAGAGTCCATGTTCAGTGGCCGG
CTGACCCACCTCTCTGGTGATATATAATGCCATTTTCGATGTGCTGCTTGTTGGTGCTTTTCTTTTCTGATGAGCCTGTT
GCTTTGCTTTGTGTGCAGGGGCGCAAGGTCAGGGTGTTCATGTACCCGAGCAGCATCTAAGGTTGGCAATCTATCATCCA
CACCAAACACCATGATGCTTGATAACATAGCTTGAAAAACTTTCTTATATTATGAGACGGAGGGAGTATTTGTGTAGTTG
TCAATAGCTCAGCGGCCATTGCTCCCGGCGGCAGCCACCATCGGCTGCTCCATGGCAAGTCAAGCCTATCTCCTTTGCCT
AATATTTTTTCCCCTAAGAGTTGAACATGAATTTGGTGTATGAATATTAATGTAGGATGCCATTGCTAATTGAATTTGGT
CTAGAAGTAGGACTAGGATATGTTCTGTTCAGAACATTTGAGATGCACC---ATGACCTAAACCTTTGGTTTTGTGCAAG
TTATGTGATCCATATTATATGCCTAATTAGTGATTACTTGGTTATTCGCATGCATATGTGGTATTCAATGCTTGATTGTA
TGTTTACCTTTTCATTTTCTATTGATTTATGCTGAAACGCTAAATTGGGCTCGGCACGACTATAGCGTTTCATAGCTTTT
TCCCCAAGCCGCCGCTAAGAGGCTTGGCGCGCTATTTAAAACTTTGATGCAGAGTCCTAGAAACGCTCCACGGTT----G
CAGCATAAGTAAGATGGCCGTGCTCCCTCGCCACTGCTGCCCTTCCCTCTTCACAGCAGTGATCCTGCTCTTGTTCTGTC
CATCCCCGGCGTCGCCTCATGCTTTCTTCATCTTCGGCGACTCCCTCGTCGACGCGGGGAACAACGACTATCTCGTTACC
CTCTCCAAGGCCAACACCCCGCCATACGGCGTCGACTTCTCGTTTTCTGGCGGCAAGCCGACCGGGAGATTCACAAACGG
CAGGACCATTGCGGATGTCATCGGTAATAGTAGCAAG---TATGAGTTTGCATGAGAAACTTTGTTTAGATCGTCCATAT
TTGATCTGACGAAAATGTCTTGGTGCTATGCTCTCAGGTGAAGCCTTGGGGCAGGAGAGCTTTGCTCCTCCCTACCTGGC
TCCAAACTCTAGTGCTGAAGTGATCAACAGTGGAGCCAACTATGCTTCTGGTTCTTCCGGCATTTTCGACGAGACCGGTT
CCTTTTACGTATGTGATTTTTT--TTTAACTT---GTATAATTCCCTTGGCTTGATTTG---------GTCTGACTTGCA
ATCG-----TGTGAAAATGTGGTTGGGTTGGCAGATTGGAAGGGTGCCACTAGGGCAGCAAATCAGCTACTTTGAGAAGA
CCAGAGCTCAGATACTGGAGACCATGGGGGAGAAAGCCGCGGCCGAGTTCTTGGGGGAGGCGCTCTTCACGGTGGCTGCT
GGATCCAATGACATCCTGGAGTACCTCTCACCTGCAGTGCCATTCTTCGGACGACAGAAGCCCGACCCTGCAGATTTTCA
GGACGCCTTGGTTGCCAAGTTGGCATTTCATCTGAAGGTGCCACTCACCTCTAACTCACTCACTAGTCACC--------A
GCACTGTAATTTTCTTTGCTTTGCTCCCATTCTGAGCTTACCATCTTGCAAATCGCATCCAAAACTAAGCGGCTGAACGA
GCTCGGGGCTAGGAAATTTGTCATCGCCGACGTCGGGCCGCTGGGATGCATACCGTACGTCCGCGCCCTGGAGTTCATCC
CTGCGGGCGAGTGCTCGGCGGCTGTGAACAAGCTCTGCGAAGGCTACAACAAGAGGCTGAAGAGGATGATCGGCAGGCTG
AACCAGGAGACGGGCCCGGAGAGCGCGTTCGTCTACACCAACACCCACGGCATCGTCATGGAGATCATCCGGCAGCACCG
TCAATACGGTAGCAGGATTTTCTTTCTTGCGTGCTGCAGA----TTCGCATTTCGTGGACTGAGAGTTGGATCTGTGT-C
GTAGGTTTCGAGGAGGCGCTGGACCCTTGCTGCGGCGGCAGCTTCCCGCCGTTCCTCTGCACCGGCGTCGCCAACTCGAG
CTCCGCCACCCTGTGCGAGGACCGCTCCAAGTACGTGTTCTGGGACGCGTTCCACCCGACCGAGGCCGTCAACTTCATCG
TCGCCGGCAGGATCGTCGACGGCGGCGCCGCCGATGCGTCGCCCGTCAACGTCCGCGCCTTGTTCCAGCGTCGATACGGA
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr2D_1_TraesCS2D01G394700
TCAGTTGAGTAGGTCCATGAGGAAGGCCCCAGACGTGGCTGTGTTTGATGCTCCCAGAGAAGCAAGGCAAGCTTGGGTAT
GATATGGTAGCGAGATAGTAATTGGGATTGTATGTAATGGTAATGGAGTTATTTTTGCTTCT-TTTTTGTTTAGTTGATT
GATTGGCCGTTCCTCTAGTTTGTGTGAGTAGAAACGGTTAGCCAAGCCAATTATAGTTTGTAGGTACTGCAGATTTCAGT
GTACATTATAATCGTTAACTGACGACAGCGTGTGAAAGATTGCATCATGTGGTTCCTATATAAGTGAACGAATAGTCACA
GTGAACTTCGACTAGATTATGTACCTAAAAAGCTAGTGATCCCTGCACTGTTCTTATACAGATTTTATGATAA-------
------GTTATCAGCAAATGGCAGTATATATTCCATTTTTCCAAGGGGGTGCATTCGGTATTGCCAGTGAATGGCTTTAC
AAATGCATTTGCCTTGGTACGGACGCATCTGCCAATGGCTCACAACCATTGATTAGCGTGTCGTGTGCACATCGGGCAGT
AAAGTGTCGTCTGTACAGTCATTTCGTCTCTATTGTCAGTGCAGCTGTGGAAACGTGTTTTATTT--CTTGTTTTTAGGA
CAGATGCGTTCCCCCGTGAGCC-AAAGAAGCT----------AGCATGTCTGACAGCTCGCCTGTACTGCGTCCAACAGA
AAATCATCTCATCCAGGTCCAGCTGGGACAGTTCAAATCTCCCCTTGAAGCAGTCAGACA-TGACCATGTCAAACGGTAC
TAGGGT---GATGCAGCAGGCACGATAAGCATG-------GCAGTGCGCCCCAGTGTACGAGGATGGGATATATGCAGAG
CAAAGATTTAAATACCGGCGCTATACGGGCCTCCCCTTCCCAAGTCAAGTTGTTGTCCTCCTCCTTGGGTCGAGCTGCTC
CTGGTCGCGA----GGAAAGAGGGGTAGCTGAAGTTACTCCCGGTGGAAGGAGGCAGCAGCAGCAGCCGGATCTGGCCAT
TCATGGTGCGGATTGAGCGGTGTGGTGGTAATTGCAGGTCGAGGTCCAACCTCTCCGCAGAGTCCATGTTCAGTGGCCGG
CTGACCCACCTCTCTGGTGATATATAATGCCATTTTCGATGTGCTGCTTGTTGGTGCTTTTCTTTTCTGATGAGCCTGTT
GCTTTGCTTTGTGTGCAGGGGCGCAAGGTCAGGGTGTTCATGTACCCGAGCAGCATCTAAGGTTGGCAATCTATCATCCA
CACCAAACACCATGATGCTTGATAACATAGCTTGAAAAACTTTCTTATATTATGAGACGGAGGGAGTATTTGTGTAGTTG
TCAATAGCTCAGCGGCCATTGCTCCCGGCGGCAGCCACCATCGGCTGCTCCATGGCAAGTCAAGCCTATCTCCTTTGCCT
AATATTTTTTCCCCTAAGAGTTGAACATGAATTTGGTGTATGAATATTAATGTAGGATGCCATTGCTAATTGAATTTGGT
CTAGAAGTAGGACTAGGATATGTTCTGTTCAGAACATTTGAGATGCACC---ATGACCTAAACCTTTGGTTTTGTGCAAG
TTATGTGATCCATATTATATGCCTAATTAGTGATTACTTGGTTATTCGCATGCATATGTGGTATTCAATGCTTGATTGTA
TGTTTACCTTTTCATTTTCTATTGATTTATGCTGAAACGCTAAATTGGGCTCGGCACGACTATAGCGTTTCATAGCTTTT
TCCCCAAGCCGCCGCTAAGAGGCTTGGCGCGCTATTTAAAACTTTGATGCAGAGTCCTAGAAACGCTCCACGGTT----G
CAGCATAAGTAAGATGGCCGTGCTCCCTCGCCACTGCTGCCCTTCCCTCTTCACAGCAGTGATCCTGCTCTTGTTCTGTC
CATCCCCGGCGTCGCCTCATGCTTTCTTCATCTTCGGCGACTCCCTCGTCGACGCGGGGAACAACGACTATCTCGTTACC
CTCTCCAAGGCCAACACCCCGCCATACGGCGTCGACTTCTCGTTTTCTGGCGGCAAGCCGACCGGGAGATTCACAAACGG
CAGGACCATTGCGGATGTCATCGGTAATAGTAGCAAG---TATGAGTTTGCATGAGAAACTTTGTTTAGATCGTCCATAT
TTGATCTGACGAAAATGTCTTGGTGCTATGCTCTCAGGTGAAGCCTTGGGGCAGGAGAGCTTTGCTCCTCCCTACCTGGC
TCCAAACTCTAGTGCTGAAGTGATCAACAGTGGAGCCAACTATGCTTCTGGTTCTTCCGGCATTTTCGACGAGACCGGTT
CCTTTTACGTATGTGATTTTTT--TTTAACTT---GTATAATTCCCTTGGCTTGATTTG---------GTCTGACTTGCA
ATCG-----TGTGAAAATGTGGTTGGGTTGGCAGATTGGAAGGGTGCCACTAGGGCAGCAAATCAGCTACTTTGAGAAGA
CCAGAGCTCAGATACTGGAGACCATGGGGGAGAAAGCCGCGGCCGAGTTCTTGGGGGAGGCGCTCTTCACGGTGGCTGCT
GGATCCAATGACATCCTGGAGTACCTCTCACCTGCAGTGCCATTCTTCGGACGACAGAAGCCCGACCCTGCAGATTTTCA
GGACGCCTTGGTTGCCAAGTTGGCATTTCATCTGAAGGTGCCACTCACCTCTAACTCACTCACTAGTCACC--------A
GCACTGTAATTTTCTTTGCTTTGCTCCCATTCTGAGCTTACCATCTTGCAAATCGCATCCAAAACTAAGCGGCTGAACGA
GCTCGGGGCTAGGAAATTTGTCATCGCCGACGTCGGGCCGCTGGGATGCATACCGTACGTCCGCGCCCTGGAGTTCATCC
CTGCGGGCGAGTGCTCGGCGGCTGTGAACAAGCTCTGCGAAGGCTACAACAAGAGGCTGAAGAGGATGATCGGCAGGCTG
AACCAGGAGACGGGCCCGGAGAGCGCGTTCGTCTACACCAACACCCACGGCATCGTCATGGAGATCATCCGGCAGCACCG
TCAATACGGTAGCAGGATTTTCTTTCTTGCGTGCTGCAGA----TTCGCATTTCGTGGACTGAGAGTTGGATCTGTGT-C
GTAGGTTTCGAGGAGGCGCTGGACCCTTGCTGCGGCGGCAGCTTCCCGCCGTTCCTCTGCACCGGCGTCGCCAACTCGAG
CTCCGCCACCCTGTGCGAGGACCGCTCCAAGTACGTGTTCTGGGACGCGTTCCACCCGACCGAGGCCGTCAACTTCATCG
TCGCCGGCAGGATCGTCGACGGCGGCGCCGCCGATGCGTCGCCCGTCAACGTCCGCGCCTTGTTCCAGCGTCGATACGGA
TGAACGAGGAGGTCGCCTTGCGTGCGTGCGTGCGTGCATGCACCGCATCGCGGAATATCTCCTCCTTCCCTCGCGCAGCA
CTTGCTGCACGTCTTCAAACGTGTAGAACGTGACGGGCGACGGTGACTTTGACGCGCGGCATTTTTTCTTTTCTTTTTCC
TTGTCT-CTGCTGTTGCCTTTGGCTCCTTTGTGAAGGCCGGAAAGAAGATCGCTGTTGTCGAAAGGAACAATTCGGAACG
AC---CGACGGACGGTAATATATACTGGCGTACGTGCGGTCTACAGAGGCGCATAAGTGCGGAGCAGTAGAGACTAGAGA
CTGGTAGCGCACGTTTTTTTACGGGACTGTTCTGCACAGCGCCGCCGGTGCAGCTTCCAGCCACGCCACGCCACGCCA--
------CGCGGGTATATATGCGTGCAACACTTGGACTCGATCTGTTGACGGCGGCCGGGCGGTGCCAGGCACGTACGTAG
CCTTCCATGGAGGCGGGTGCGGGGCCTCCGAAGCCCGCGGCCACGGCGAAGGTGGCGTCGTCGTCGTCGTCGTGGTGCTC
GTCCGTGGCCGCCACGGCGGCGAGCCTGGTGGCGGTGGGCCTGGGCGGCGCGGCGCTGCTGGTGTGGTGGGCGCTGGCGT
TCCACCCGGCGCACGCGCGGCTCTGGATGGTGCCCGCGGGGCTGGTCCTCCTCGGCACGCCCGTCCTCGCCTGGCTCTCC
CTCTTCGCCTCCGGCCCGTGCCGCTGCGGCCGCCGCC---CGGTCGACGCGCCGGAGCCTCCGGCGCCGGGCGCACACGC
AGCCGCTTAGCGACCTGCTT----GTACGTAGCTTGCAGTTGCTTCACCTGCCGAAT-CCATTCTTCCGTACGCATGCAG
TAGCTTCTCTTCTCTCGGCACGTACGTGCGTGTTTAATTAGTTTGCTCTGCTGCTTCTTGCTCGCTCCGGGATCAGATCG
GACCTGACCAGATGTACACAGCCA---TACATATGTTCAGCTTTTGTTTCTATGTCCAGGATCACT
>chr2B_1
TCAGTTGAGTAGGTCCATGAGGAAGGCCCCAGACGTGGCTGTGTTTGATGCTCCCAGAGAAGCAAGACAAGCTTGGGTAT
GATATGATAGTGAGATAGTA--TGGGATTGTATGTAATGGTAATGGAGTTATTTTTGCTTCTTTTTT-GTTTAGTTGATG
GATTGGCCGTTCCTCTAGTTTGTGTGAGTAGAAACGGTTAGCGAAT-------TAGTTTGTAGGTACTGCAGATTTCAGT
GTACATTATAATCGTTATAACT-GACGACGTGTGAAAGATTGCAT---GTGGTTCCTATATAAGTGAACGAATAGTCACA
GTGAACTTCGACTAAATTATGTACCTCAAAAGCTAGTGATCCCTGCACTGTTCTTATACAAATTTTATGATAAGTTATTG
TGGAATGTTATCAGCCAATGGCAGTATATATTCCAACTTTTCAAGGGGATGCATTCAGTATTGCCAGTGAATGGCTTTAT
AAATGCATTTGCCTTGGTACGGATGCATCTGCCAT---------------------------------------------
--------------------------TCTCTATTGTCAGTGCAGCTGTGGAAACATACTGTATTTATTTATTTTTCAAGA
CAGATGCATTCCCCCGTTAGCT-GAACAAGCTAGCAGCCATTAGCATGTCTGACAGCTCGCCTGTACTGCGCCCAACAGA
AAACCATCTCATCCAGGTCCAGTTGGGACAGTTCAAATCTCCTCTTGAAGCAGTCAGACA-TGACCATGTCAAACGGTAC
TAGGGT---GATGCAGCAGGCACGATAAGCATG-------GCAGTGCGCCC-AGTGTACGAGGATGGGATATATGCAGAG
CAAAGATTTAAATAGCGGCGCTATACGGGCCTCCCCTTCCCAAGT-----TGTTGTCCTCCTCCTTGGGTCGAGCTGCTC
CTGGTGGCGAGGAAGGAAGGAGGGGTAGCTGAAGTTACTCCCGGTGGAAGGA---AGCAGCAGCAGCCGGATCTGGCCAT
TCATGGTGCGGATTGAGCGGTGTGGTGGTAATTGCAGGTCCAAGTCCAACCTCTCCGCAGAGTCCATGTTC---------
---------CTCTCTGGTG----ATAATACCATTTTCGATGTGCTGCTTGTTGGTGCTTTTCTGATGAGG-----CTGTT
GCTTTGCTTTGTGTGCAGGGGCGCAAGGTCAGGGTGTTCATGTACCCAAGCAGCATCTAAGGTTGGCAATCTATATCATC
CACTCCATGCTTGA----------------------------------------------------TATTTGTGTAGTTG
TCAATAGCTCAGCGGCCACTGCTCCCGGCGGCGGCCACCATCGGCTTCTCCATGGCAAGTCAAGCCTATCTCCTTTGCCT
A---------CCCCTAAGAGTTGAATATGAATTTGGTGTATGAATATTAATGTAGGATGCCATTGCTAATTGAATTTGGT
CTGGAAGTAGGACTAGGATATGTTCTGTTCAGAATATTTGAGATGCACTATGATGACCTAAACCTTTGGTTTTGTGCAAG
TTATGTGATCCATAC--TATGCCTAATTAGTGATTACTTGGTTATTCGCATGTATATGTGATATTCGATGCTTGATTGTA
TGTTTACCTTTTCATTTTCTATTGATTCATGCTGAAACGCTAAATTGGGCTTGGCACG-CTATAGCGTCTCATAG-TTTT
TCCCCAAGCCGCTGCTAAGAGGCTTGGCGCGCTATTTAAAACTTTGATGCAGAGTCCTAGAAACGCTCCACGGTTTGTTG
CAGCATACGTAAGATGGCCGTGCTCCTTCGCCACTGCTGCCCTTCCCTCTTCACAGCAGTGATCCTGCTCTTGTTCTGTC
CATCTCCGGCGTCGCCTCATGCTTTCTTCATCTTCGGCGACTCCCTCGTCGACGCGGGCAACAACGACTATCTCGTGACC
CTCTCCAAGGCCAACACCCCGCCATACGGCGTCGACTTCTCGTTTTCTGGCGGCAAGCCGACCGGGAGATTCACAAACGG
CAGGACCATTGCGGATGTCATCGGTAATAGTAGCAAGCAGTATGAGTTTTCATGAGAAACTTTGTTTAGACTGTCCATGC
TTTATCTGACGAAAATGTCTTGGTGCTATTCCCTCAGGTGAAGCCTTGGGGCAGGAGAGCTTTGCTCCTCCCTACTTGGC
TCCAAACTCTAGTGCTGAAGTGATCAACAGTGGAACCAACTATGCTTCTGGTTCTTCCGGCATTTTCGACGAGACCGGTT
CCTTTTACGTATGTGATTTTTA--TTTTGCAGTTGGTATACTTCCCTTGGCTTGCTTTG---------GTCTGAACTCTG
AATTGCAACTGTGAAAATGTGGTTGGGTTGGCAGATCGGAAGGGTGCCACTCGGACAGCAAATCAGCTACTTTGAGAAGA
CCAGAGCTCAGATACTGGCGACCATTGGGGAGAAAGCCGCGGCCGACTTCTTGGGGGAGGCGCTCATCACGGTGGCTGCT
GGATCCAATGACATTTTGGAGTACCTCTCACCTTCAGTGCCATTCTTCGGACGACAGAAGCCTGATCCTGCAGATTTTCA
GGACGCCTTGGTTTCCAAGTTGGCATTTCATCTGAAGGTGCCACTCACCCCTAACTCACAGTGTTCCTAGCTAGTGAGTA
GTACTGTAATTTTCTTTGGTTTGCTCCCATTCTGAGCTTACCATCTTGCAACTCGCTTCCAAAACGAAGCGGCTGAACGA
ACTCGGGGCTAGGAAATTTGTCATCGCCGACGTCGGGCCGCTGGGCTGCATACCGTACGTCCGCGCCCTGGAGTTCATCC
CTGCCGGGGAGTGTTCCGCAGCTGTGAACAAGCTCTGCGAAGGCTACAACAAGAGGCTGAAGAGGATGATCGGCAGGCTG
AACCAGGAGATGGGCCCGGAGAGCGCGTTTGTCTACACCAACACCCACGGCATCGTCATGGAGATCATTCGGCAGCACAG
TCAATACGGTAGTAGGATTTTCTTTCTTGCGTACTGCAGGCGGGTTCGCATTCCGTGGACTGAAACTTGGTCATGCGCAC
GTAGGTTTCGAGGAGGCGCTGGACCCTTGCTGCGGCGGCAGCTTCCCGCCGTTCCTCTGCATCGGCGTCGCCAACTCGAG
CTCCGCCACCCTGTGCGAGGACCGCTCCAAGTACGTGTTCTGGGACGCGTTCCACCCGACCGAGGCCGTCAACTTCATCG
TCGCCGGCAGGATCGTCGACGGCGGCGCCGCCGATGCGTCGCCCGTCAACGTCCGCGCCTTGTTCCAGCGTCGATACGGA
TGAACGAGGAGATCGCCTTGT--------GTGCGTGCGTGCACCGCATCGTGGAATATCTTCTCC---CCCCGCGCAACA
CTTTCCGCACGTCTTCAAACGTGTAGAACGTGACGGGCGACGGTGACTTTGACGCGCGGCAA-TTTTCTTTTCTTTTTCC
TTCTCTGCTGTTGTTGCCTTTGGCTGCTTTGTGAAGGCCGGAAAGTAGATCGCTGTTGTAGAAAGGAACAATTCGGAACG
ACGACCGACGGACGGTAATATATACTGGCGTACGTGCGGTCTACAGAAGTGCATAAGCGCGAAGCAGTAGAGAGGAGTAG
TAGCGCACATGCATA-TTTGACGGGACTATTCTGCACACCGCCGCCGGTGCAGCTTCCAGCCACGCCACGCCACGCCAG-
-------GCGGGTATATATGCGCGCAACACTTGGACTCGATCTATTGACGACGGCCGGGCGGTGCCAGGCGCGTACGTAA
CCTTCCATGGAGGCGGGTGCGGGGCCACCGAAGCCCGCGGCCACGGCGAAGGTGGCGTCGTCGTCGTCGTCGTCGTTCTC
GTCCGTGGCCGCCACGGCCGCGAGCCTGGTGGCGGTCGGTCTGGGAGGCGCGGCGCTGCTGGTGTGGTGGGCGCTGGCGT
TCCACCCGGCGCACGCGCGGCTCTGGATGGTGCCCGCGGGGCTGGTCCTCCTCGGCACGCCCGTCCTCGCCTGGCTCTCC
CTCTTCGCCTCCAGCCCGTGCCGCTGCGGCCGCCGCC---CGGTCGAGGC------GCCTCCGGCGCCGGGCGCACACGC
AGGCGCTTAGCGACCCGCCTCC----ACGTAGCTTACAGCTTG---------------CCATTCTTCCGTGCGCATGCAG
TAGCTTCTCTTCTCCCGACACGTACGTGCCTGTTTAATTAGTTTGCTCTGCTGCTTCTTGCTCGCTCCGGGATCAGTTGA
GATCATACCACATGTACACAGCCA---TACATATGTTCAGCTTTTGTTTCTATGTCCAGGATCACT
>chr2A_1
TCAGTTGAGTAGGTCCATGAGGAAGGCCCCAGACGTGGCTGTGTTTGATGCTCCCAGAGAAGCAAGACAAGCTTGGGTAT
GATATGATAGCGAGATAGTA--TGGGATTGTATGTAATGGTAATGGAGTTATTTTTGCTTCTTTTTTTGTTTAGTTGATT
GATTGGCCGTTCCTCTAGTTTGTGTGAGTAGAAACGGTTAGCCAAGCCAATTATAGTTTGTAGGTACTGCAGATTTCAGT
GTACATTATAATCGTTAACTGACGACAACGTGTGAAAGATTGCATCATGTGGTTCCTATATAAGTGAACGAGTAGTCACA
GTGAACTTCGACTAGATTATGTACCTAAAAAGCTAGTGATCCCTGCACTGTTCTTATACAAATTTTATGATAAGTCATTG
TGGAACGTTATCAGCAAATGGCAGTATATATTCCATTTTTCCAAGGGGATGCATTCGGTATTGCCAGTGAATGGCTTTAT
AAATGCATTTGCCTTAGTACGGATGCATCTGCCAT---------------------------------------------
--------------------------TCTCTATTGTCAGTGCAGCTGTGGAAAC-----TTATTA--TTATTTTGTAAGA
CAGATGCATTCCCCCGTTAGCGGGAACAAGATAGCAGCAATTAGCATGTCTGACAGCTCGCCTGTACCGCGCCCAA----
---TCTTCTCATCCAGATTCAGTTGGGACAGTTC-AATCTCCTCTTGAAGCAGTCAGACAATGACCTTGTCAAACGGTAC
TACGGATACGATGCAGCAGGCACCATAAGCATGCAGCATGGCAGTGCGCCC-AGCGTACGAGAATTGGATATATGCAGTC
CTA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------CCTAGAGACGTTCCACGATTCAGCA
---------TAGGATGGCCGTGCTCCCTCCCCGCTGCTGCCCCTCCCTCTTCACAGCAGTGATCTTGCTCCTGTTTCGCC
CATCTCCGGCATCGCCTCATGCTTTCTTCATCTTCGGCGACTCCCTCGTCGACGCGGGGAACAACGACTATCTCGTGACC
CTCTCCAAGGCCAACACCCCGCCATACGGCGTCGACTTCTCGTTTTCTGGCGGCAAGCCGACCGGGAGATTCACAAACGG
CAGGACCATTGCGGATGTCATTGGTAATAGTAGCAA---GTATGAGTTTTCATGAGAAACTTTGTTTAGACTGTCCATGT
TTTATCTGACGAAAATGTCTTGGTGCTATTCCCTCAGGTGAAGCCTTGGGGCAGGAGAGCTTTGCTCCTCCCTACTTGGC
CCCAAACTCTAGTGCTGAAGTGATCAACAGTGGAGCCAACTATGCTTCTGGTTCTTCCGGCATTTTCGACGAGACCGGTT
CCTTCTATGTAAGTGATTTTTCTGTTCAACTT---GTATACTTCCCTTGGCTTGATTTCTGTCTGTCTGTCTGAATTGCA
ATTG-----TGTGAAAATGTGGTTGGGTTGGCAGATCGGAAGGGTGCCACTAGGACAGCAAATCAGCTACTTTGAGAAGA
CCAGAGCTCAGGTACTGGAGACCATGGGGGAGAATGCCACGGCCGACTTCTTGGGGAACGCGCTCTTCACGGTGGCTGCT
GGATCCAATGACATCCTGGAGTACCTCTCACCTGCAGTGCCATTCTTGGGACGACAGAAACCTGACCCTGCAGTTTTCCA
GGACGCCTTGGTTGCCAAGTTGGCATTTCATCTCAAGGTGCCACTCGATCACCTCTAACTCGCTAGTCACC--------A
GCACTGTAATTTTCTCTGCTTTGCTCCCGTTCTGAGCTCACCATCTTGCAATTCGCTTCCAAAACGAAGCGGCTGAACGA
GCTCGGGGCTAGGAAATTTGTCATCGCCGACGTCGGCCCGCTGGGCTGCATACCGTACGTGCGCGCCCTGGAGTTCATCC
CTGCGGGCGAGTGTTCGGCGGCTGTGAACAGGCTCTGCGAAGGCTACAACAGGAGGCTGAAGAGGATGATCGGCAGGCTG
AACCAGGAGACGGGCCCGGAGAGCGCGTTCGTCTACACCAACACCCACGGCATCGTCATGGAGATCATCCGGCAGCACCG
TCAATACGGTAGCAGGATTTTCTTTCTTGCGTGCTGCAGGCAGGTTCGCATTTCGTGGACTGAGAGTTGGATCTGTGT-C
GTAGGTTTCGAGGAGGCGCTGGACCCTTGCTGCGGCGGCAGCTTCCCGCCGTTCCTCTGCATGGGCGTCGCCAACTCGAG
CTCCGCCACCCTGTGCGAGGACCGCTCCAAGTACGTGTTCTGGGACGCGTTCCACCCGACCGAGGCCGTCAACCTCATCG
TCGCCGGCAGGATCGTCGACGGCGGCGCCGCCGATGCGTGGCCCGTCAACGTCCGCGCCTTGTTCCAGCGTCGATACGGA
TGAACGAGGAGATCG----------------GCGTGCATGCACCGCATCGCGGAATATCTCCTCC---CCG-GCGCAACA
CTTGCTGCACGTCTGCAAACGTGTAGAACGTGACGGAGGACGGTGACTTTGACGCGCGGCAA-TTTTCTTTTCTTTTTCC
TTCTCTCCGCTGTTTGCCTTTGGCTCCTTTGTGAAGGCCGGAAAGTAGATCGCTGTTGTCGAAAGGAACCATTCGGAG--
-CGACCGACGGACGGTAATATATACCGGCGTACGTGCGGTGTACAGAGGTGCATAAGTGCGAAGCAGTAGAGAGTAGAGA
CTGGTAGCGCACG-TTTTTTACGGGACTGTTCTGCGCAGCGCCGCCGGTGCAGCTTCCGGCCACGCCACGCCACGCCACG
CGCCCACGCGGGTATATATGCGCGCAACACTTGGACTCGGTCTGTTGACGACGGCCGGGCGGTGCCAGGCGCGTACGTAG
CCTTCCATGGAGGCGGGTGCGGGGCCTCCGAAGCCCGGGGCCGCGGCGAAGGTGGCGTCGTCGTCGTCGTCGT---TCTC
GTCCGTGGCCGCCACGGCGGCGAGCCTGGTGGCGGTGGGCCTGGGCGGCGCGGCGCTGCTGGTGTGGTGGGCGCTGGCGT
TCCACCCGGCGCACGCGCGGCTCTGGATGGTGCCCGCGGGGCTGGTCCTCCTCGGCACCCCCGTCCTCGCCTGGCTCTCC
CTCTTCGCCTCCGGCCCGTGCCGCTGCGGCCGCCGCCGCCCGGTCGACGCGCCGGAGCCTCCGGCGCCGGGCGCACACGC
AGCCGCTTAGCGACCTGCTTACTTGTACGTAGCTTGCAGTTGCTTCACCTGCCGAATACCATTCTTCCGTGTGCATGCAG
TAGCTTCTCTTCTTTCGACACGTACGCGCCTGTCTAATTAGTTTGCTCTGCTGCTTCTTGCTCGCTCCGGGATCAGATGA
GATCAGACCAGATGTACACAGCCATACTACATATGTTCACCTTTTGTTTCTATGTCCAG-------
>SNPs
------------------------------------------------------------------S-------------
------S-------------SS----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------------------------------------S-------------------
------------------------------------------------S------------------------------S
-----------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S-SS---------S-SS------S--
-------S---------S---S-S--S--------------------------------------------S--------
----------------------S-------------------S-------------------------------------
---------------------------------------------------S----------------------------
--------------S------------------------------SSSSS------------------------------
-----S------------S---------------------------------SSS-------------------------
----------------------------------------S-S----------------------------SSSSSSSSS
SSSSSSSSS----------SSSS-----S----------------------------------SS-SS-SSSSSS-----
-----------------------------------------------S--------------------------SSSSSS
---SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
------------------S-------------S-------------S---------------------------------
-SSSSSSSSS---------------S------------------------------------------------------
--S-------------------------------S-------------S-------------------------------
--------------SSS-----------------------------------S-------S-----S-------------
---------------------------S-----------------------S------S---------S------S----
------------S-------------------------------------------------------------------
-------S------------------------------------------------------------------------
----S-----------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------------------------S--------------------SS------S-
--S--------------------------S-S-------------------------------------------S----
--------------------------------------------------------------------------------
---------------------S------------------S---------------------------------S-----
--S---------------------------------S-----------------S-------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------S-----------S------------------
---------------------------------------------------S----S--------S--------------
---------------------------------------------S----------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------SSSSSSSSS------------------------------------SSS--S------S--
-------------------------------------------------------------SS-----------------
--S-------S----------------------------------S----------------------------------
-------------------------------------------------S-----------S-----------S------
--------------------------------------------------------------------------------
----------------------S---------------------------S-------------------S---------
-------------------------------------------------------------------------S--S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-----------------S-----------S------------------------------------------------SS
--S-S-------------------------------------------------------------
>forward_565
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-----------------------------------------------------------------TGCACATCGGGCAGT
AAAGT---------------------------------------------------------------------------
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>reverse_1997
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TACC
CTCTCCAAGGCCAACA----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_1114
--------------------------------------------------------------------------------
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------------------------------------------------------CCGCAGAGTCCATGTTCAGT------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_2623
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CGACCCTGCAGATTTTCA
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_2437
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TGTGGTTGGGTTGGCAGATT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3674
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTAGAGA
CTGGTAGCGCACG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
