>input_sequence_35099
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-ATGGTGGCGCCACTGGACCAGGCGGCACCGCATGCCACATTGGAACAAGATCAGCGAGACGCCGCCACAGCCACAGAGA
ATAGCGGCAGGGATCACGGAGCTGCCGACATAGCAGATGCTGATCCAGGCGAAGCAATAGGCGCTCCTGGATCCGCACCT
TCTGTCACGTCAAGGATTTCGGTGCAGAAGGTGTGCTCACTCGTGGGCAAGTTTAACAAATTCAAGAGGGATTTGGTCGA
GGAGATAGGCTTTGGTGGGATGCTGGGGATTCAGATGTTGGCAAAGTTGAATTTGAAATTCAGCGCGTGGCTAATGGAAA
GAGTCGACGTCGAGTCGAGTACACTGAAAATAGACGAGCAAAGGGTTCTGCAGATCCAGGACCATGATGTCCAGAAGGTA
TTCAGTCTGCCATGTGGCACCAGATCGATATGCCCCGATACAACCGAGCCATCCGAAGCCTGCAAAGAGTTCATGCGAGC
TTCTGCCTATTTGAGCAAAGGCGCGCATAGTCTAAAGGCCGCGGAGGCTTATCTCCTGAGAGATGACATCAATGCAGATT
CCAGCAAGGTCCAGATAGATTGCTTCAAGATAGCCTTTGTTATTTTTGTTGTTGGGCACCTGTTGGCTCCATCGACTAAG
CATGACTACATCACCATAGATTTCTGGGCTGCACTCAACGATATCTCGCAAGTTAAGGAATTTAATTGGTGTGCTTATGT
ACTCGAGCATTTGAACAGAGCTGTTGGGAAGTTGAAAACTGATATCCGCAACCGGAACATCACTGTACATCTTGTTGGCT
GCCACCTGTTTCTTCAGGTCCTTGTTTCTTCCTATTATTTTTGTGTATCATAATTTTGTACAGCTCAGACCATAATATTT
GAATGTGCAAATGTCGTGCAGGTATTCTACTTGGACAATCTTGATCTTGGTCCACTTTCCAAGACAAAAGACCATCTACC
AAGGATTAGTCTTTTTGACTACGAGTCGGTTAAGAAGATGATAGAAGTGATCACTAGCAACGTGGACGGAGATACATCAT
TCGCTGGAGCTAGTGTGAGACCTCTCCCATTTAAATTTGCATACAGGCAGTATGTGCTTTCACAGAATGACAGAATAGTG
TTCAGTTCAGTAGCTGAACACATGCAGTGGTCATGTACATGTTCATA-TTTTTTATCCCTTCCTGTTTGACATGCCAGTT
TAGGCGCGCTCAAGATGTTTGCTACTCCAGAGTCCACTACGAAAGCCACACTCACCGACCAGATGTAGCTTCTGACCTGC
CCCATCATGCCCCAGGTTTTGTTGGCACAAAGCACCAACACAACCCAATTACTCCCATGCTACGAAGCAGCTTCACTGAA
ACTGGACAAGAAGATTTCTCCAACCATCTCCGACTGAAATACCCGTCATTTGTGAGTCATTAGTTTCTTATTATTAGTTG
TGATTTCTTCATGTTACATCGAATTGCGCTCCTTCTGTTT--GTGTAACTAATAGTGCAAATGCAGGCAGACCACCCGCT
TATGACCATTTTGGAAGAACATAATGCACACATGTTGGAAAATATATCTGAAATTAGGCGAAGTTGCGAAGTGGCGATGT
CTACCTTCGCGGACAAGCTTCTGGGCTATATATCTGAGAACCGCTGTTGCTGCAGAGCGGTGGGACGAACCGATTGTTTA
CTGAGGTCGCCGCACACAATTCATGGTGGGAAGCACTAGAGCTTTTTTGTTTCAGGGTTTCTACCCACTCTTGCA-----
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
AACTAACAAGCAACATTTTTGCTTCTCAAGGGAACACGCTTGGCACACCTACAACACGTCAATCCTGATTTTACTGGGGC
ACGATGTAGTCATAGGGTTTTAAACTTTTAATACATTAGCACTGTTCTTATGGTTCCCTGTTAGTTCACCACCCACCCCC
TCTCCCCCAATTACGGTAGGGTACTGATTTGTTTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CTCGTTGGGTGTACCAGAGAGTTCAACCGAGCAGAATTCA
CTCTCTCACAAACGGGATGCACCTGAGCCCACTGGAGCAGGTAGAGCTTGTACACAGCAGATTTCAGACAATGGTCCATT
TTCATTATTAAGACATGACATAGGATACAAATTATCTTATCTCTTGGTCACAAGTCATGACACCTC-TTTTTTGGGTAGG
ACATCACAAGAAGATCCGGGTGAACCAGCCTCTAGTTGAGACAGACCTTCAAGCAAGTATACCTGGATGCTCAACTAGCA
ACAGCCTACCCCGCAGTCCTTTACAAGTTGACATCAACCTGGCTGCACCGTAG---------------------------
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-------------------
>chr3D_1_TraesCS3D01G242100
GATCTAATCAAGACAGGTATACGGGATCGATCCTGAAAACCGACGGTTATTATACCGGATGACCCGGTTTGTAGGATCTG
CTAGAGATGCTCTTATCATTTGGGATGCCCTGATATAGGTGGACAAACGGGCCAGGATAAAACGAGCAAGCCCGCGAGTA
CGCCGGCACGGCCCGCCATGGGCCAGGCATGACACGGGCTAAACGGGACGTGCCCGGCACGCGGCATGCATTGGGCCATG
CCTGGGCCTGGAGCCTGGGCACGCGGGCCGGCACGTCACGGCCCGTTTATTTTTTTATATAATTCTTAATTTTTTTTATA
TATGTATACCTAAAATATAGTCCAATAGGCCTAAAAATCAGCCCAACATGCTGAAAATATGCGGCCCAGCATGCTAAACG
GGCCAACGTGCTGGCCCGTTTACTAACTGGGCCGTTCCTGGCCCTGGAGGCTTAGCACGCGGGCCGGCACGGCACGGCCC
GTATAGTAATCGTGCCCTGGCGGGCCATGCCGGGCCAGGCACGATTACGATGGGCCGACCCGTTTGGCCAGGTCTGTGCC
CTGAGGGCTTAACCCCCACAAGTGTATGATCCAACAATTATTACGGTGGTTCTCCAACCCCCATCTGTCCACCCACCCTC
---CACAC---CACACACCCCTGCTCGCAAC---------------------CCATGGCAATTGAGTTACGGAGAACTCA
GTGAGGGGTGGTCACT-GGCTCAAGGTGGTGAGTCGGAGACGCCGGCGGATCTGCTTCCTAGGCCAGTTACGGCCCCGGC
CCCCTTCAGGTACTCACGGTCT--TACGAATCGAAGTAGGTTCTTACTGCCGGGTATGAGAAATGCTCTCTGTCCATTTG
TTCAGAGTTCCTCCTTACG-------TTATCAGCTAGTTTAAACTTGAAACCAATGGATCGATCACACGCCCACCCGTAA
ATCCTTTTTTTGCAGCGCCTTGTTCTAGAGGAGTAGGCAAAATTTACTTGTGTG----CCGTCTGTTTGTTAGTTCATCA
CATGGTGGCGCCACTGGACCAGGCGGCACCGCATGCCACATTGGAACAAGATCAGCGAGACGCCGCCACAGCCACAGAGA
ATAGCGGCAGGGATCACGGAGCTGCCGACATAGCAGATGCTGATCCAGGCGAAGCAATAGGCGCTCCTGGATCCGCACCT
TCTGTCACGTCAAGGATTTCGGTGCAGAAGGTGTGCTCACTCGTGGGCAAGTTTAACAAATTCAAGAGGGATTTGGTCGA
GGAGATAGGCTTTGGTGGGATGCTGGGGATTCAGATGTTGGCAAAGTTGAATTTGAAATTCAGCGCGTGGCTAATGGAAA
GAGTCGACGTCGAGTCGAGTACACTGAAAATAGACGAGCAAAGGGTTCTGCAGATCCAGGACCATGATGTCCAGAAGGTA
TTCAGTCTGCCATGTGGCACCAGATCGATATGCCCCGATACAACCGAGCCATCCGAAGCCTGCAAAGAGTTCATGCGAGC
TTCTGCCTATTTGAGCAAAGGCGCGCATAGTCTAAAGGCCGCGGAGGCTTATCTCCTGAGAGATGACATCAATGCAGATT
CCAGCAAGGTCCAGATAGATTGCTTCAAGATAGCCTTTGTTATTTTTGTTGTTGGGCACCTGTTGGCTCCATCGACTAAG
CATGACTACATCACCATAGATTTCTGGGCTGCACTCAACGATATCTCGCAAGTTAAGGAATTTAATTGGTGTGCTTATGT
ACTCGAGCATTTGAACAGAGCTGTTGGGAAGTTGAAAACTGATATCCGCAACCGGAACATCACTGTACATCTTGTTGGCT
GCCACCTGTTTCTTCAGGTCCTTGTTTCTTCCTATTATTTTTGTGTATCATAATTTTGTACAGCTCAGACCATAATATTT
GAATGTGCAAATGTCGTGCAGGTATTCTACTTGGACAATCTTGATCTTGGTCCACTTTCCAAGACAAAAGACCATCTACC
AAGGATTAGTCTTTTTGACTACGAGTCGGTTAAGAAGATGATAGAAGTGATCACTAGCAACGTGGACGGAGATACATCAT
TCGCTGGAGCTAGTGTGAGACCTCTCCCATTTAAATTTGCATACAGGCAGTATGTGCTTTCACAGAATGACAGAATAGTG
TTCAGTTCAGTAGCTGAACACATGCAGTGGTCATGTACATGTTCATA-TTTTTTATCCCTTCCTGTTTGACATGCCAGTT
TAGGCGCGCTCAAGATGTTTGCTACTCCAGAGTCCACTACGAAAGCCACACTCACCGACCAGATGTAGCTTCTGACCTGC
CCCATCATGCCCCAGGTTTTGTTGGCACAAAGCACCAACACAACCCAATTACTCCCATGCTACGAAGCAGCTTCACTGAA
ACTGGACAAGAAGATTTCTCCAACCATCTCCGACTGAAATACCCGTCATTTGTGAGTCATTAGTTTCTTATTATTAGTTG
TGATTTCTTCATGTTACATCGAATTGCGCTCCTTCTGTTT--GTGTAACTAATAGTGCAAATGCAGGCAGACCACCCGCT
TATGACCATTTTGGAAGAACATAATGCACACATGTTGGAAAATATATCTGAAATTAGGCGAAGTTGCGAAGTGGCGATGT
CTACCTTCGCGGACAAGCTTCTGGGCTATATATCTGAGAACCGCTGTTGCTGCAGAGCGGTGGGACGAACCGATTGTTTA
CTGAGGTCGCCGCACACAATTCATGGTGGGAAGCACTAGAGCTTTTTTGTTTCAGGGTTTCTACCCACTCTTGCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
AACTAACAAGCAACATTTTTGCTTCTCAAGGGAACACGCTTGGCACACCTACAACACGTCAATCCTGATTTTACTGGGGC
ACGATGTAGTCATAGGGTTTTAAACTTTTAATACATTAGCACTGTTCTTATGGTTCCCTGTTAGTTCACCACCCACCCCC
TCTCCCCCAATTACGGTAGGGTACTGATTTGTTTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CTCGTTGGGTGTACCAGAGAGTTCAACCGAGCAGAATTCA
CTCTCTCACAAACGGGATGCACCTGAGCCCACTGGAGCAGGTAGAGCTTGTACACAGCAGATTTCAGACAATGGTCCATT
TTCATTATTAAGACATGACATAGGATACAAATTATCTTATCTCTTGGTCACAAGTCATGACACCTC-TTTTTTGGGTAGG
ACATCACAAGAAGATCCGGGTGAACCAGCCTCTAGTTGAGACAGACCTTCAAGCAAGTATACCTGGATGCTCAACTAGCA
ACAGCCTACCCCGCAGTCCTTTACAAGTTGACATCAACCTGGCTGCACCGTAGTCCGGATGAGCGTCTGTATTTTGCGTT
CAGCATCAACTTTCATGCTGTACGTAACACTGGATCAGCAGCCCTCATGTCATCAGAAATGTCCGTTGTCTTCGTAGCAT
AGTGTCTTAGGCTTTCATCACCAACTTGCACGATATATGTGAACTCTGATTGTTCACGGCTTAGTTT-GCTGCATACGGT
CTTAAGCGATCGTTTGGTGCGCATTCTCTAGGGTCCCGAAGAAATTCCCGATAATGCTGTAAACTCTAGCCAGGCTAACA
TGTTTCTCCCTGAGTTGCTTAACCAATTAAGTCTTTTGTGCAATTGCCAATGTCCCGGTGAGATTGCTAACACAACACCT
CTCCGCAAGTTT-GGACATGGTCAGCATGATTGAGGCTTATTCTGTGTTCACTAATG----TACTGTCCACTATCATCGG
ACCTATCTTTATATTCTTTTCTTTCTTTTCTTTTTTGAGAAAAGGCCCAGCCTGCAATTATATTACCACTGAGGAGATAA
TACAATCCTCCATGAGGAGGGATTTAAGAGTGAGGGGGACATCTCCTATACATTTATAATCTCCATGTATTCTAGCAAGA
GCAGCAAGCTCATGTGCTAGGTTGTTGCTGGATCTTCTCACGGCTTTGATGGTGACTTCACTGAACATTTTCATGAGGTC
CCTACTGTCCGTGACAAGGGGGAAAAGGGCAGACTGATTGTGTAATTTGAAGTCCAGTAGTGCTGGAATGGATGCACAGT
CCGTTTCCACACATAGAGGTCCGAGGTATATTTTACTTACGACAGAGAGTCCGTGTAATACCGCAGCTAGTTCGGCTTCT
TCCGGGTCTTTGCACGACTGCAGACGATTTCCACCTGAGACCGCAACAAGCCCCCTGTAGTCTCTGACTATGAATCCAGC
TGCGGACTCCCCCGTGCTCGGTATGAATGATGCATCAGTATTCAGCTTCCAGGTTCCTGCAGTCGGAGGGGGCCATCGTC
TCTGTCATTGACGGGCAGG
>chr3B_565
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----GGGCTTAACCCCCACAAGTGTATCATCCAACAATTATTACGGTGGT--TCCAACCCCCATCTGTCCACCCACCCTC
ATATCACACCACACACACCCCTGCTCGCAAACCCCTCTCATCTGCTCGCAATCCATGGCAGTTGAGCTACGGAGAACTTA
GTGAGGTGTGGTCGCCCGGCTGAAGGTGGTGATTTGGAGACGCCGGCGCGACTGCTGCCTTGGCCAGGTACGTCCCCGGT
CCCCTTCAGGTACTCATGGTCT--TACGAATCTAAGTAGGTTCTTACTGCCGGGTATGAGAAATGCTCTCTGTCCATTTG
TTCAGAGTTCCTCCTTTCG-------TTATCAGCTAGTTTAAACTTCAAACCAATGGACCGATCACACGCCCACTCGTAA
ATCCTTTTTTTGCAGCGCCTTGTT-TAGAGGAGTCAGCAAAATTTACTTGTGTGCTGTCCGTCTGTTAGTTAGTTCATCA
CATGGTGGCGCCACTGGAGCAGCCGGCACCGCATGCCACCTTGGAACAAGACCAGCGAGACGCCGCCACAGCCACAGAGA
ATAGCGGCAGGGATCACGGAGCTGCCGACATAGCAGATGCTGATCCAGGCGAAGCAATATGCGCTCCTGGATCCGCACCT
TCTGTCACGTCAAGGATTTCGGTGCAGAAGGTGTGCTCGCTCGTTGGCAAGTTTAACAAATTTAAGAGGGATTTGGTCGA
GGAGATAGGCTTTGGTGGGATGCTGGGGATCAAGATGCTGGCAAAGTTGAATTTGAAGTTCAGCGCGTGGCTAATGGAAA
GAGTCGACGTCGAGTCGAGTACACTGAAAATAGACGAGCAAAGGGTTCTGCAGATCCAGGACCATGATGTCCAGAAGGTA
TTCAGTCTGCCATGCGGCACCAGATCGATATGCCCCGATACAACCGAGCCGTCTGAAGCTTGCAAAGAGTTCATGCGAGC
TTCTGCCTATTTGAGCAAAGGTGCGCATAGTCTAAAGGCCGCGGAGGCTTATCTCCTGAGAGATGACATCAATGGAGATT
CCAGCAATGTCCAGATAGATTGCTTCAAGATAGCCTTTGTTATTTTTGTTGTTGGGCACCTCTTGGCTCCATCAACTAAG
CATGACTACATCACCATAGATTTCTGGGCCGCACTCAACGATATCTCGCAAATTAAAGAATTTAATTGGTGTGCTTATGT
ACTCGAGCATTTGAACAGAGCTGTTGGGAAGTTGAAAACTGATATCCGCAACCGGAACATCACTGTACATCTTGTTGGCT
GCCACCTGTTTCTTCAGGTCCTTTTTTCTTCCTATTATTTTTGTGTATCATAATTCTCTTCAGCTCAGACCATAATATTT
GAATGTGCAAATGTCGTGCAGGTATTCTACTTGGACAATCTTGATCTTGGTCCACTTTCCAAGACAAAAGACCATCTACC
AAGGATTAGTCTTTTTGACTACGAGTCAGTTAAGAAGATGATAGAAGTGATTACTAGCAACGTGGATGGAGATACATCAT
TCGCTGGAGCTAGTGTGAGACCTCTCCCATTTAAATTTGCATACAGACAGTATGTGCTTTCACTGAATGACAGAATAGTG
TTCGGTTCAGTAGTTGAACACATGCAGTGGTCATGTACACGTTCATA-TTTTTTATTCCTTCCTGTTTTACATGCCAGTT
TAGGCGCGCTCAAGATGTTTGCTACTCCAGAGTCCACTGTGAAAGCCACACTCACCGAGCAGATGTAGCTTCTGACCTGC
CCCATCATGCCCCAGGTTTTGTTGGCACAAAGCACCAACACAACCCAATTACTCCCATGCTACGAAGCAGCTTCACTGAA
ACTGGACAAGAAGATTTCTCCAACCATCTCCGATTGAAATACCCGTCACTTGTGAGTCATTAATTTCTTATTGTTAGTTG
TGATTTCTTCATGTTACATCGAGTTGTGCTCCTTCTGTTT--ATGTAACTGATAGTGCAAACGCAGGCAGACCACCCGCT
TATGACCATTTTGGAAGAACATAATGCACACATGATGGAAAATATATCTGAAATTAGGCGAAGTTGCGAAGTGGCGATGT
CTACCTTAGCGGACAAGCTTCTTGGCTATATATCTGAGAATCGCTGTTGCTGCAGAGCGGTGGGACGAACCGATTGTTTA
CTGAGGTCACCGCACACAATTCATGGTGAGAAGCACTAGAGCTTTTTTGTTTCAGGGTTTCCACCCCCTCTTGTGTAACT
AACAACAACAACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTCGC
AACCAACTCATGGCTCTGGCACAGAAAATCTTTTGGGTTTCATCTCCATAAGAGTGGCTGAGTTTTTACGTTGGCTCGCC
AAGCCTATCACAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCTATGTTGAGACAACATAGGCGGAGTTCCTCTTGTGT
AACTAACAAGCAACATTTTTGCTTCTCAAGGAAACACGTTTGGCATACCTACAACACGTCAATCCTGATTTTACTGGGGC
ACAATGTAGTCATAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGTTGGGTGTACCAGAGAGTTCAACCGAGCAGAATTCA
CTCTCTCACAAACGGGATGCACCTGAGCCCACTGGAGCAGGTAGAGCTTGTATACCGCAGATTTCAGACAATGGTCCATT
TTCATTATTAAGACATGACATAGGATACAAATTATCTTATCTCTTGGTCACAAGTCATGACACCTCTTTTTTTGGGTAGG
ACATCACAAGAAGATCCGGGTGAACCAACGTCTAGTTGAGACAGACCTTCAAGCAAGTATACCTGGATGCTCAACTAACA
ACAGCCTACCCTGCAGTCCTTTACAAGTTGACATCAACCTGGCCGCACCTTAGTCCAGATGAGCATCTTTATTTTGCTTT
CAGCATCAACTTTCACGCTGTATGTAACACTGGATCAGCAGCCCTCATGTCATCAGAGATGTCCGTTGTCTTCGTAGCAT
AGTGTCTTAGGCTTTCATCACTAACTTGCACGATATATGTGAACTCTGATTGTTCACGGCTTAGGTT-GCTGCATACTGT
CTTAAGCGATCGTTTGGTGCGCATTCTCTAGGGTCCCAAAGAAATTCCCGATAATGCTGTAAACTCTAGCCAGGCTAACA
TGTTTCTCCCTGAGTTGCTTAACCAATTAAGTCTTTTGTGCAATTGCCAATGTCCCGGTGAGATTGCTAACACAACACCT
CTCCACAAGTTTTGGACATGGTCCGCATGATTGAGGCTTATTCTGTGTTCACTAATGTACTTACTGTCCATTATCATTGT
ACCTATCTTTATATTCTTTTC-----------------------------------------------------------
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-------------------
>chr3A_593
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--------------------------------AACAATTATTACGGTGGTTCTCCAACCCCCATCTGTCCACCCACCCTC
CATCACAC---GACACACCCCTGCTCGCAAACCCCTCTCATCTTCTCGCAATCCATGGCAATTGAGCTACGGAGAACTTA
GTGAGGGGTGGTCG-CCGGCTCAAGGTGGTGATTTGGAGACGCCGGCGGATCTGCCGCCTAGGCCAGTTACGGCCCCGGC
CCTCTTCAGGTACTCACGGTCTTATACGAATCTAAGTAGGTTCTTACTGCCGGGTATGAGAAATGCTCTTTGTCCATTTG
TTCAGAGTTCCTCCTTTCGATCCCCGTTATCAGCTAGTTTAAACTTGAAACCAATGGATCGATCACACGCCCACTGGTAA
ATCATTTTATTGCAGCGCCTTGTTCTAGAGGAGTCAGCAAAATTTACTTGTGTGCTGTCCGTCTGTTAGTTAGTTCATCC
CATGGTGGCACCACTGGACCAGGCGGCACCGCATGCCACATTGGAACAAGATCAGCGAGACGCCGCCACAGCCACAGAGA
ATAGCGGCAGGGATCACGGAGCCGCCGACATAGCAGATGCTGATCCAGGCGAAGCAATATGCGCTCCTGGATCCGCACCT
TCTGTCACGTCAAGGATTTCGGTGCAGAAGGTGTGCTCGCTCGTCGGCAAGTTTAACAAGTTCAAGAGGGATTTGGTCGA
GGAGATAGGCTTTGGTGGGATGCTGGGGATCAAGATGCTGGCAAAGTTGAATTTGAAATTCAGCGCGTGGCTAATGGAAA
GAGTCGAGGTCGAGTCCAGCACACTGAAAATAGACGAGCAAAGGGTTCTGCAGATCCAGGACCATGATGTCCAGAAGGTA
TTCAGTCTGCCATGCGGCACCAGATCGATATGCCCCGATACGACCGAGCCGTCTGCAGCCTGCAAAGAGTTCATGCGAGC
TTCTGCCTATTTGAGCAAAGGCGCGCACAGTCTAAAGGCCGCGGAGGCTTATCTCCTGAGAGATGACATCAATGCAGATT
CCAGCAAGGTCCAGATAGATTGCTTCAAGATAGCCTTTGTTATTTTTGTTGTTGGCCACCTGTTGGCTCCATCCACTAAG
CATGACTACATCACCATAGATTTCTGGGCCGCCCTCAACGATATCTCGCAAATTAAAGAATTTAATTGGTGTGCTTATGT
ACTCGAGCATTTGAACAGAGCTGTTGGGAAGTTGAAAACTGATATCCGCAACCGGAACATCACTGTACATCTTGTTGGCT
GCCATCTGTTTCTTCAGGTCCTTGTTTCTTCCTATTATTTTTGTGTATCATAATTCTGTTCAGCTCAGACCATAATATTT
GAATGTGCAAATGTCGTGCAGGTATTCTACTTGGACAATCTTGATCTTGGTCCACTTTCCAAGACAAAAGACCATCTACC
AAGGATTAGTCTTTTTGACTACGAGTCGGTTAAGAAGATGATAGAAGTGATCACTAGCAACGTGGATGGAGATACATCAT
TCGCTGGAGCTAGTGTGAGACCTCTCCCATTTAATTTTGCATACAGACAGTATGTGCTTCCACAAAATGACTGAATAGTG
TTCGGTTCAGTAGCTGAACACATTCAGTGGTCATGTACACGTTCACATTTTTTTATCCCGTCCTGTTTTACATGCCAGTT
TAGGCGCGCTCAAGATGTTTGCTACTCCAGAGTCCACTACGAAAGCCACACTCACCGAGCAGATGTAGCTTCTGACCTGC
CCCATCATGCCCCAGGTTTTGTTGGCACAAAGCACCAACACAACCCAGTTACTCCCATGCTACGAAGCAGCTTCACTGAA
ACTGGACAAGGAGATTTCTCCAACCATCTCCGATTGAAATACCCGTCACTTGTGAGTCATTAATTTCTTATTATTAGTTG
TGATTTCTTCATGTTACATCGAATTGCACTCCTTCTGTTTATATGTAACTAATAGTGCAAAGGCAGGCAAACCACCCGCT
TATGACCATTTTGGAAGAACATAATGCACACATGATGGAAAATATATCTGAAATTAGGCGAAGTTGCGAAGTGGCGATGT
CTACCTTAGCGGACAAACTTCTTGGCTATATATCTGAGAACCGCTGTTGCTGCAGAGCGGTGGGACGAACTGATTGTTTA
CTGAGGTCGTCGCACACAATTCATGGTGAGAAGCACTAGAGCTTTTTTGTTTCAGGGTTTCCACCCCTTCTTGCATAACT
AACAAGCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------AACATTTTTGCTTC-CAAGGAAACACGCTTGGCACACCTACAACACGTCAATCCTGATTTTAGTGGGGC
ACAATGTAGTCATAGGGTTTTAAACTTTTAATACATCACCACTGTTCTTATGGTTCCCTGTTAGTTTACCACCCCCACC-
---CCCCAAATTACGATAGGGTACTGATTTGTTTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CTCGTTGGGTGTACCAGAGAGTTCAACCGAGCAGAATTCA
CTCTCTCACAAACGGGATGCACCTGAGCCCACTGGAGCAGGTAGAGCGTGTACACAGCAGATTTCAGACAATGGTCCATT
TTCATTATTAAGACATGACATAGGATACAAATTATCTTATCTCTTGGTCACAAGTCATGACACCTCTTTTTTTGGGTAGG
ACATCACAAGAAGATACGGGTGAACCAGCCTCTAGTTGAGACAGACCTTCAAGCAAGTATACCTGGATGCTCAACTAACA
AGAGCCTACCCCGCAGTCCTTTACAAGTTGACATCAACCTGGCCGCACCGTAGTCCAGATGAGCGTCTTTATTTTGCATT
CAGCATCAACTTTCACGCTGTATGTAAAACTGGATCAGCAGCCCTCATGCCATCAGAGATGTCCGTTGTCTTCGTAGCAT
AGTTTCTTAGGCTTTCCTCACCAACTTGCACAATATATGTGAACTCTGATTGTTCACGGCTTAGGTTTGCTGCATACTGT
CTTAAGCGATCGTTTGGTGCACATTCTCTAGGATCCCAAAGAAATTCCTGATAATGCTGTAAACTCTAGCCAGGCTAACA
TGTTTCTCCCTTAGTTGCTTAACCAATTAAGTCTTTTGTGCAATTGCCAATGTCCCGGTGAGATTGGTAACACAACACCT
CTCCACAAGTTT-GGACATGGTCAGCATGACTGAGGCTTATTCTCTGTTCACTAATG----TACTGTCCATTATCATCGG
ACCTATATTTATATTCTTTTC-----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr6A_3719
TTTATTTTTATTTA------------------------------------------------------------------
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------------------------------TTTTTTGAGAAAAGGCCCAGCCTGCAGTTATATTACCACTGAGGAGATAA
TACAATCCTCCATGAGGAGGGATTTAAGAGTGAGGGGGACATCTCCTATACATTTATAATCTCCATGTATTCTAGCAAGA
GCGGCAAGCTCATGTGCTAGGTTGTTGCTGGATCTTCTCACGGCTTTGATGATGACTTCACTGAACATTTTCATGAGGTC
CCTACTGTCCGTGACAAGGGGGAAAAGGGCAGACTGATTGTGTAATTTGAAGTCCAGTACTGCTGGAATGGATGCACAGT
CCGTTTCCACACATAGAGGTCCGAGGTAAATTTTACTTACGACAGAGAGTCCGTGTAATATCGCAGCTAGTTCGGCTTCT
TCCGGGTCTTTGCACGACGGCAGACGATTTCCACCTGAGACCGCAACAAGCCCCCTGTAGTCTCTGACTATGAATCCAGC
TGCGGACTCCCCCGTGCTCGGTATGAATGATGCATCAGTATTCAGCTTCCAGGTTCCTGCAGTCGGAGGGGCCCAT----
-------------------
>chr3A_3721
TCATTC-----TTT------------------------------------------------------------------
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------------------------------TTTTTTGAGAAAAGGCCCAGCCTACAGTTATATTACCACTGAGGAGATAA
TACAATCCTCCATGAGGAGGGGTTTAAGAGTGAGGGGGACATCTCCTATACATTTATAATCTCCATGTATTCTAGCAAGA
GCGGCAAGCTCATGTGCTAGGTTGTTGCTGGATCTTCTCACGGCCTTGATGGTGACTTCACTGAACATTTTCATGAGGTC
CCTACTGTCCGTGACAAGGGGGAAAAGGGCAGATTGATTGTGTAATTTGAAGTCCAGTAGCGCTGGAATGGATGCACAGT
CTGTTTCCACACATAGAGGTCTGACGTAAATTTTACTTACAACAGAGAGTCCGTGTAATATCGCAGCTAGTTCGGCTTCT
TCCGGATCTTTGCACGACTGCAGACGATTTCCACCTGAGACCACAACAAGCCCCCTGTAGTCTCTGACTATGAATCCAGC
TGCGGACTCCCCCGTGCTCGGTATGAATGATGCATCAGTATTCAGCTTCCAGGTACCTGCAGTCGGAG------------
-------------------
>chr3A_3723
TTT-------TTTT------------------------------------------------------------------
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------------------------------TTTTTTGAGAAAAGGCCCAGCCTGCAGTTATATTACCACTGAGGAGATAA
TACAATTCTCCATGAGGAGGGGTTTAAGAGTGAGGGGGACATCTCCTATACATTTATAATCTCCATGTATTCTAGCAAGA
GCGGCAAGCTCATGTGCTAGGTTGTTGCTGGATCTTCTCACGGCCTTGATGGTGACTTCACTGAACATTTTCATGAGGTC
CCTACTGTCCGTGACAAGGGGGAAAAGGGCAGACTGATTGTGTAGTTTGAAGTCCAGTAGCGCTGGAATGGATGCACAGT
CCGTTTCCACACATAGAGGTCCGAGGAAAATGTTACTTACAACAGAGAGTCCGTGTAATATCGCAGCTAGTTCGGCTTCT
TCCGGATCTTTGCACGACTGCAGATGATTTCCACCTGAGACCACAACAAGCCCCTTGTAGTCTCTGACTATGAATCCAGC
TGCGGACTCCCTCGTGCTCGGTATGAATGATGCATCAGTATTCAGCTTCCAGGTACCTGCAGTCGAAGGGGCCCATTGGC
TC-----------------
>SNPs
SS-S-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----------------------S----------------------------------------------------
------------------------------S-----------------------------------S-----------S-
-------------S-S----------------S-S---------------------S-----------------------
--------------------------------S-----------------------------------------------
----------------S---------------------------------------------------------S-----
----------------------------------SS-------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------S-----S-----------------------------------
------------------------------SS-----S------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------S--S--------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------------------S---------------------S----S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---S--------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------------------S---------------------------------
---S-----------------------------------S----------------------------S-----------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------------------------------S--------------S-------------S-----------------
------------------------------------------S------------------S------------------
----------------------------------S---------------------------------------------
-------S--------------S---------------------------------------------------------
----------------------------S--------------------------------S----S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--S---------------------------------S-S---------------------------S-------S-S--S
SSS----S-------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------S------------S-----------S--------S--
---------------S------S----------------------------------S----------------------
----------------------------------------------------------------S------------S--
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------------------------S---------
---------------------SSSSSSSSS--------------------------S-----------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------------S-------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S----S-S-
--SSSSSSSSSSSSSSSSS
>forward_389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GCTGAAAATATGCGGCCCAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_1491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATCCGAAGCCTGCAAAGAGT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_390
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CTGAAAATATGCGGCCCAGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_1710
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TGCACTCAACGATATCTCGCA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------
>forward_1245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGAAGGTGTGCTCACTCGTG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_3203
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TCCCCCAATTACGGTAGGGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_2749
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCGCACACAATTCATGGTGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------
>reverse_4799
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
TCTGTCATTGACGGGCAG-
