>input_sequence_35096
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------------------------------------------------------------ATGGGAAGGTGAGGAGAGAA
GGGAATTCCAAGCACCTATAAAATGACCCTATCCATCACATCTTCTGCAGCCA-AGTATATTTCATGGACGAACATGCAC
CTGAGATTCCAGTTGGTTATAGCAGTTCCTCCACTTCACCAGCCAGCAGCGTCTGGGAGAGTCACCAGATCCTACAGATG
CATGCACCCTTCCCCTCATGGAGCCCCCACACCGGCACACTCCTTACCGCCGCTGCCACTGACCCGGCAACCTTCTGCGA
GGACCCCTTGTCACCAGCCCGCACACACCTTCCAAGCAGGCATCTATGGAACCAGACTGACCTGTGAGTATGCACGCCGT
ACACTTGTTGATGCTTGTTCAGTGACATCTGACAGAAGTT-GACCGTGAAACAACCTTTTCAGTAGCATGGGAGTTCATG
GGAGCAGCAACGAGCTTGGCGGGAGCAGTGGCCATGGAAAGGACTTCCTTTCCTTGCTTGAAGCGAGGACGGTGATGCCA
GAAATGCTCGATGATTTCTCCTCGGCGGCATGCGACTACCTCAAAGGGATGGACGGCAGCGACTACAACAGCATCTCCGC
ATCAGCTTCCTATGGTTTTGACAGTGGCGGTCCGTACGCTGGCCCCAGTGCTCTGCCCGTCAGGCGTGATGGGATTGCGA
GCTCTCCACCGGTGTACCCCGGGAACAGTACCTTGGTGCAAGAGAGCATGATGGGTTGCATGCCAAGCCACAACCACGAG
GTAAAACTAGATGGTTCCCAGCAGCAGGAGCTTGGAGCTCCCATGAATGCATTCCTGCAGAAAACGCTTCCTACTAGTGT
TGCAATTCATGGAAGCCCTCTGGGTTATTCTGGCTCTGGGAGCGAAAGGGCTTTCCCGGAGGGCCGAGTAATGCAGGTTT
CGTTTGATGCTAGGATTTCACCAGATGCAATCTATGCTAGTGGTTACAGATCAAAAACAGAATTGGCACATACCAATCAG
TATGAGCAACGTACTATTTCGGTAAGACTGGAATGCTAAATTGTATTGCTAAGTAACGGCAGAGTAGAAGTTATTGCTGT
TTACAATGTGCTCTACAATCTACCTGTGTACATATGACTCTTGAATTTGCAGGCAAGGACTGGTACAGGTCAAAGTGGTG
CTGAAGGTGATCCTAAGAAGAGAAAATCAGAGGAAAAGTTGGCAGGCAACGGAAAGAGGTCGAAGAAAGATACTTCAAGT
AGATCACCTCCAAAGGTAACTAACAATGAAGATTATTTGACGAACTGGTTTAAACTCTCTGAGAAGCATCCGATCAACTT
ATTTTGAGCCAAACACAGGCAGAAGTGCCTGATATGAAGTTGGGAGAGAGAGACAAGATCATAGCATTGCAGCAGATCAT
CTCACCGTATGGGAAGGTACAAATTCTGCAAGTATTGCTAAGTGAAAATAGTGAGATGACCTTCCATTCTTCTCTTTTTA
TTGCTAACTCCATCTAAAAGTTGTATTTTATCAGACGGATAGAGCGTCAGTGTTGTATGAAACCATCAAGCACATCGAAT
ATCTACATGAGCAAATACAGGTTGATATCATCATAATCCTTTTCAGATAAGCCGTATGTTTCGACTTACAGATGTTACTG
CCAAGGTTTCAAAG-AAATGTTCTGCAGCTGAGCCATGTAAATACGTCCTGTAGCATAATAAAGATACAATGGAAACTCA
CACCGACGGTTTCACATTATCGTTGCATTTCACTAAGCATTTGCTACCTTGACTTGCTATGCCTGTTTGTTGGCGGATTT
CCATGGCATTCTTTTTCTTTCGAGAATGAGGATTTCCATGCCATGTCAAGTCTTGTCTAAAGAAAGATGATGTTGTCGTC
GTCTATAGAATAATTAACATAAAGAATAATGTCACTCGCACAGTCACGAGTCACAACCAGCACTACACCTTTTCTAAAGT
TAGGTAATAATGCCAACTGTTAGTACCATGCTGACTGCTT-GCCCTTTTTCTGATTTGGACAGCTATTGAGTGATCCCTA
CATGAAGAATAGCACAAACGAGGTAG---CATTGAATTTCAGAGATTTGTATTTTTTTCCCTTTTCTAAATCGTCTCAAA
CGATACCTGGTAATGACTTGCTATCATCAACTCTTTTCAGGTGCCCTTTCAATGGGGAGGTAAAGAGGAGGATTTGAGAG
GGAGAGGGCTTTGCCTGGTCCCTGTTTCTTGCACCCCGCAAGTTTTCCAGGATAATAGCCTGCCGGACTGCTGGACGCCG
GTGTACAAGAGCTCCCGGTACCAATGA-----------------------------------------------------
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>chr2D_1_TraesCS2D01G400800
TGAGTTTATGGGTATCATGACCTCTTTACTTTTGTTAGACTTACAGTGAAATGGAGGGGGGTAATGGGGATTT-----TT
TTACAAAGTGCTATGTCAGAATTACTAAATCTTTGTAGTTTCTTGTTATTACTAGGAACTACAAAAGCTCTGGTACTGAT
TTTTCAGGTCTCAGATCTCCAAATTGCATGTTTTTTT---TTTCAAATATTAGAGCATGTCCAGATGCTGCTTCACT-GG
AGTTGGATCCATCAACAGGTTCGAACTAAACTTGAAATCTACCCTGGCACACCAAGACCACTCGTCCACTCTCAGCGCAA
AATGGCAGGGTCTTTCTACTTGCGTTGACTGAAG--TCTCTCCTCTCCACAGTCCACACTCTCACAGTATACAGCCTGCA
AAGACTGTAGTGTCCCTTTATGCTATGGTTTAGGTGCCATAGCATCATTTTAGTACTCCCTCCGATCCATATTAATTGTC
GCTGATTAATCAGGCCACTTTAAACTTTTCAGGGAAATATGAGTACAAATTAGTATAACTATATTTGTAATGAGGATATA
TGG--CTTGAGTCACTCGACATTGTGTGCTCATTTTTCTGGAAATTACTTCTCCACAGTAGAACTGCTTACTGAA-----
--GTCAACTCTGTGGTGCACGACGGCACACACATCCTTTCAGAGGAATGTGCAAGTGGGAGAATGAGAGAGACCCACTGC
CTGTAGCAAGTACATTCCTATCCGTAACATAATGATTTTCCACCAAAATGTTCTTGATATTGGTTTCTTTCCCGGTCATT
AGGATCTGAAATTCCCTCCAAGCTTACCAAGTTACTGGGTTTAATAATCAATTCCATCTCACTGCACCCCACAAGGCCCG
CCCTACTGATTAGTGATTACTAGAAGTAGATCGCTCAAGGTCAAATGAACTCATGCCAAGTAAAAGTTAACTTGACCACC
CCTTAGAATTTGAAAGGATCTCATCAGGCATACGTCAGCATACACTCTGAAAAGACCACCATGGGAAGGTGAGGAGAGAA
GGGAATTCCAAGCACCTATAAAATGACCCTATCCATCACATCTTCTGCAGCCA-AGTATATTTCATGGACGAACATGCAC
CTGAGATTCCAGTTGGTTATAGCAGTTCCTCCACTTCACCAGCCAGCAGCGTCTGGGAGAGTCACCAGATCCTACAGATG
CATGCACCCTTCCCCTCATGGAGCCCCCACACCGGCACACTCCTTACCGCCGCTGCCACTGACCCGGCAACCTTCTGCGA
GGACCCCTTGTCACCAGCCCGCACACACCTTCCAAGCAGGCATCTATGGAACCAGACTGACCTGTGAGTATGCACGCCGT
ACACTTGTTGATGCTTGTTCAGTGACATCTGACAGAAGTT-GACCGTGAAACAACCTTTTCAGTAGCATGGGAGTTCATG
GGAGCAGCAACGAGCTTGGCGGGAGCAGTGGCCATGGAAAGGACTTCCTTTCCTTGCTTGAAGCGAGGACGGTGATGCCA
GAAATGCTCGATGATTTCTCCTCGGCGGCATGCGACTACCTCAAAGGGATGGACGGCAGCGACTACAACAGCATCTCCGC
ATCAGCTTCCTATGGTTTTGACAGTGGCGGTCCGTACGCTGGCCCCAGTGCTCTGCCCGTCAGGCGTGATGGGATTGCGA
GCTCTCCACCGGTGTACCCCGGGAACAGTACCTTGGTGCAAGAGAGCATGATGGGTTGCATGCCAAGCCACAACCACGAG
GTAAAACTAGATGGTTCCCAGCAGCAGGAGCTTGGAGCTCCCATGAATGCATTCCTGCAGAAAACGCTTCCTACTAGTGT
TGCAATTCATGGAAGCCCTCTGGGTTATTCTGGCTCTGGGAGCGAAAGGGCTTTCCCGGAGGGCCGAGTAATGCAGGTTT
CGTTTGATGCTAGGATTTCACCAGATGCAATCTATGCTAGTGGTTACAGATCAAAAACAGAATTGGCACATACCAATCAG
TATGAGCAACGTACTATTTCGGTAAGACTGGAATGCTAAATTGTATTGCTAAGTAACGGCAGAGTAGAAGTTATTGCTGT
TTACAATGTGCTCTACAATCTACCTGTGTACATATGACTCTTGAATTTGCAGGCAAGGACTGGTACAGGTCAAAGTGGTG
CTGAAGGTGATCCTAAGAAGAGAAAATCAGAGGAAAAGTTGGCAGGCAACGGAAAGAGGTCGAAGAAAGATACTTCAAGT
AGATCACCTCCAAAGGTAACTAACAATGAAGATTATTTGACGAACTGGTTTAAACTCTCTGAGAAGCATCCGATCAACTT
ATTTTGAGCCAAACACAGGCAGAAGTGCCTGATATGAAGTTGGGAGAGAGAGACAAGATCATAGCATTGCAGCAGATCAT
CTCACCGTATGGGAAGGTACAAATTCTGCAAGTATTGCTAAGTGAAAATAGTGAGATGACCTTCCATTCTTCTCTTTTTA
TTGCTAACTCCATCTAAAAGTTGTATTTTATCAGACGGATAGAGCGTCAGTGTTGTATGAAACCATCAAGCACATCGAAT
ATCTACATGAGCAAATACAGGTTGATATCATCATAATCCTTTTCAGATAAGCCGTATGTTTCGACTTACAGATGTTACTG
CCAAGGTTTCAAAG-AAATGTTCTGCAGCTGAGCCATGTAAATACGTCCTGTAGCATAATAAAGATACAATGGAAACTCA
CACCGACGGTTTCACATTATCGTTGCATTTCACTAAGCATTTGCTACCTTGACTTGCTATGCCTGTTTGTTGGCGGATTT
CCATGGCATTCTTTTTCTTTCGAGAATGAGGATTTCCATGCCATGTCAAGTCTTGTCTAAAGAAAGATGATGTTGTCGTC
GTCTATAGAATAATTAACATAAAGAATAATGTCACTCGCACAGTCACGAGTCACAACCAGCACTACACCTTTTCTAAAGT
TAGGTAATAATGCCAACTGTTAGTACCATGCTGACTGCTT-GCCCTTTTTCTGATTTGGACAGCTATTGAGTGATCCCTA
CATGAAGAATAGCACAAACGAGGTAG---CATTGAATTTCAGAGATTTGTATTTTTTTCCCTTTTCTAAATCGTCTCAAA
CGATACCTGGTAATGACTTGCTATCATCAACTCTTTTCAGGTGCCCTTTCAATGGGGAGGTAAAGAGGAGGATTTGAGAG
GGAGAGGGCTTTGCCTGGTCCCTGTTTCTTGCACCCCGCAAGTTTTCCAGGATAATAGCCTGCCGGACTGCTGGACGCCG
GTGTACAAGAGCTCCCGGTACCAATGATCCCAGCGATCGCATGTTTCCTTTATCACCTCTAGTTGTCACGCTCACGAATT
GGTTGGGGTGTTCACGACTTTACGAGTAGTCGGTTATTTTGCTTGCGTTCTCCTTGTTTTTACTTTACTATACTAGTTTT
ATTTCCGGTGTATTGTATGGTGCCCGATGTGTAGTCTAGAATAACAAAGTTGGGGGTCTTAGATCTTTGGCTTTGTGTGA
AAACGGTGTCGATGCAGGCTTATCACTCGCTATTAGGAGAACGGTA-TAATTATTCCCGTCTTTTGAAGGTTGAACCGCA
CTGCTTGTACTTGATATTTCCATGGCATTTTACCCTTTGATTTGATGTGTTACTTGATGGCACGGCTGGTAGCACAGATA
TGCAGGTATGCACGTCCAT--AAAAAGAGGAAATATATGTTC-TTTAGAAGAAAAAGAGGAAATATATGTTTCTTTTCGA
GAATCAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
GAGGAAATATATGTAGTGATGCGTAGGCAAATTATGGGCCAAACGAGACCTGCGTCTAAACTAGCTATTAGCCA------
-TTCTCATTTGCGACATCTGGACTTCTGATAACCATTCGGCCGCATCATGGGCCTGTTTGAAATGCAGGAAAAAAAAGCC
CAAAGGGGAGGGGTT-CTAAGGAATCACCGCCTTTTAGCCCTTGTTTTGGTTTGTAGGATTTTGAAAATGTAGTAATAAT
AAAACACAAGAATATAATAGATTTTTACAGAGGGAGTATGTGCTAAACAAAGGGTTGTGAAA---TAGCAAAAAATTCAC
AAAAATGGTGTTGATTTGCAAGAATAGAGAGAACACAGTAAAAACACAGTCTAATGAAGGTTAAAACACAAGTAAAAGTA
AGGTTAGATCGTTAACAACAACTTATGGACTTTGCATTATTCTTTGCACAGAAATGCAAGAAAGTGGTTTGAGTGGATTG
TAAAGTTCTTTCATTTTCCCTTTTAAACTCGAACCAAAGG-AAAAAAATCCTCTACTTTTCATATGTACAATTC
>chr2A_29
----------------------------CTTTTGTTAGACTTGCGGTGGAATGGAGGGGGGTCATGTGATTTTTTTTCTT
TTACAAAGTGTTATGTCAGGATTACTAAATCTTTGTAGTTTCTTGTC---ACTAGGAACTTAAAAAGCTGTGGTACTGAT
TTTTCAGGTCGCAGATCTCCAAATTGCATG----TTT---TTTCAAATGTTAGAGCATGTCCAGATGCTCCTTCCCTTGG
AGTTGGATTG-TCAACAGGTTCGAACTAA-CTTGAAACCTACCCTGGCACACCAACACCCCTCGTCCACTCTCAGCACAA
GATGGCAGGGTCTTTCTACTTGTGTTGACTGAAGTCTCTCTCCTCTCCACAGTCCAGACTCC-ACAGTATACAGCTTCCA
AAAACTATGGTGTCCCTTTATGCTATGGTTTAGGTGCCATGGCATCATTTTAATAAATAA--------------------
------TAATCATGCCACTTTAACCTTTTCAAGGAAATATGAGTCCAAATTAGTGTAACTATATTCGTAATGAGGATATA
TT--ACTTGAGTCACTCGACATTGTGTGCTCATTTTTCTTGAAATTAGTTCTCTAAAGTAGAACTGCTTACTGAACATAC
AAGTCCACTGTGTGGTGCACGATGGCACACACATCCTTTCAGAGGAATGTGCAAGTGGGAGAATGAGAGACT--CACTGC
CTGTAGCAAGTACCTTCCTATCTGTAACATAATGATTTTCCACCAAAATGTTCTTGATATTGTTCTCCTTCCCACTCATT
AGGATCTAAAATTCCCTCCAAGCTTACCAAGTTATGGGGTTTAATAATCAATTCCATCTCACTGCATCCCACAAGTCCCA
CCA-------TACTGATTACTAGAAGTAGATCACTCGAGGTCAGGTGAACTCGTGCCAAGTAAAAGTAAAATTGACAACC
TCTTAGAATTTGAAAGGATCTCATCAGGCACACGTCGGCATACACTCTGAAAAGACCACCATGGGAAGGTGAGAAGAGAA
GGGAACTCCATGTACCTATAAAATGACCCTATCCATCACATCTTCTGCAGCCAAAGCATATTTCATGGACGAACATGCAC
CCGAGATTCCAGTTAGTTATAGCAGTTCCTCCACTTCACCAGCCAGCAGCGTCTGGGAGAGTCACGAGATCATACAGAAG
CATGCACCCTTCCCCTTATGGAGCCCCCACACTGGCACACTCCTTGCCTCTGCGGCCACTGACCCGGCAACCTTCTGCGA
GGACCCCTCTTCACCAGCCCGCACACACCTTCCAAGCAGGCATCTATGGAACCAGACTGACCTGTGAGTATGCACGTCTC
ACACTTGTTGATGCTTGTTCAGTGACATCTGACAGAAGTTAGACCATGAAACAACCTTTTCAGTAGCATGGGAGCTCATG
GGAGCAGCAACGAGCTTGGCGGGAGCAGTGGCCACGGAAAGGACTTCCTTTCCTTGCTCGAAGCGAGGACGGTGATGCCA
GAAATGCTCGATGATTTCTCCTCGGCGGCATGCGACTACCTCAAAGGGATGGACGGCAGCGACTACAACAGCATCTCCGG
ATCAGCTTCCTATGGTTTTGACAGTGGCGGTCCGTACGCTGGCCCCAGTGCTCTGCCCGTCAGCTGTGATGGGATTGCGA
GTTCTCCACCAGTGTACCTTGGGAACAGTACCTTTGTGCAAGAGAGCATGATGGGTTGCATGCCAAGCCACAACCACGAG
GTAAAA---GATGGTTCCCAGCAGCAGGAGCTTGGAGCTCCCATGAATGCATTCCTGCAGAAAACGCTTCCTACTAGTGT
TGCAATTCATGGAAGCCCTCTGGGTTATTCTGGCTCTGGGAGTGAAAGGGTTTTTCAGGAGGGCCGAGTAATGCAGGTTT
CATTTGGTGCTAGGATTTCACCAGATGCAATCTATGCTAGTGGTTACAGATCAAAAACAGAATTGTCAGATACCAATCAG
CATGAGCAACGTACTGTTTCGGTAAGATTGGAATGCTAAATTGTATTGCTAAGTAACGGCAGAGTAGAAGTTATTGCTGT
TTACAATGTGCTCTACAATCTACCTGTGTACATATGATTCTTGAATTTGCAGGCAAGGACTGGTACAGGTCAAAGTGGTG
CTGCAGGTGATCCTAAGAAGAGAAAATCAGAGGAAAAGTTGGCAGGCAACGGAAAGAGGTCGAAGAAAGATACTTCAAGT
AGATCACCTCCCAAGGTAACTAACAATGAAGATTATTTGACGAACTGGTTTAAACTCTCTGAGAAGCATCCGATCAACTT
ATTTTGAGCCAAACACAGGCAGAAGTGCCTGATATGAAGTTGGGAGAGAGAGACAAGATCATAGCATTGCAGCAGATCAT
CTCACCGTATGGGAAGGTACAAATTCTGCAAGTATTGCTAAGTGAAAATAGTGAGATGACCTTCCATTCTTCTCTTTTTA
TTGCTAACTCCATCTAAAATTTGTATTTTATCAGACAGATAGAGCATCAGTGTTGTATGAAACCATCAAGCACATCGAAT
ATCTACATGAGCAGATACAGGTTGATATCATCATAATCCTTTTCAGATAAGCCGTATGTTTTGACTTGCAGATGTTACTG
CCAAGGTTTCAAAAAAAATGTTCTGCAGCTGAGCCATGTAGATACGTCCTGTAGCATAA----GATACAATGAATACTCA
CACCGACGGTTTCACATTATCGTTGCACTTCACTAAGCATTTGCTGCCTTGACTTGCTATGCCTGTTTGTTGGCGGATTT
CCATGCCATTCTTTTTCTTTCGAGAATGAGGATTTCCATGCCATGTCAAGTCTTGTCTAAAGAAAGATGATGTTGTCGTC
GTCTATAGAATAATTAACATAAAGAATAATGTCACTCACACAGTCACGAGTCACAACCAGCACTACACCTTTTCTAAAGT
TAGGTAATAATGCCAACTGTTAGTACCATGCTGACTGCTT-GCCCCTTTTCTGATTTGGACAGCTATTGAGTGAACCCTA
CATGAAGAATAGCACAAACGAGGTAGTGGCATTGAATTTCAGAGATATGTATTTTTCT--CTTTTCTAAACCGTCTTAAA
CG-TACCTGGTAATGACTTGCTATCATAAACTCTTTTCAGGTGCCCTTTCAATGGGGAGGTAAAGAGGAGGATTTGAGAG
GCAGAGGGCTTTGCCTGGTCCCTGTTTCGTGCACCCCGCAAGTTCTCCAGGATAATAGCCTGCCGGACTGCTGGACGCCG
GTGTACAAGAGCTCCCGGTACCAATGATCCCAGCGATCGCATGTTTCCTTTATCACCTCTACTTGTCACGCTCATGAATT
GGTTGGGGTGTTTACGACTTTACGGATAGTCGGTTATTTTGCTTGCGTTCTCCTTGTTTTTACTTTACTATACTAGTTTT
GTTTCCGCTGTATTGTATGGTGGCCGATGTGTAGTATAGAATAACAAAGTTGGGGGTCTTAGATCTTTGGCTTTGTGCGA
AAACGGTGCCGATTCAGGCTTAGCACTCGCTATTAGGAGAACAGTA-TAACTATTTCCGTCTTTTGAAGGTTGAACCGCA
CTGCTTGTACTCGATGTTTCCATGGCATTTTACCCTTTGATTTGATTTGCTACTTGATGGCACGGCTGTTAGCATAGATA
TGCAGGTATGCACGTCCAAAAAAAGAGAGGAAATATATGTTTTTTTAGAAGAAAAAGAGGAAATATATAACTCCGCCTAT
GTTGTCGCAACATAGCCTGTCCTAAACCGGATAAAGGAGGAGGGTTGTGATAGGCTTGGTGAGCCAACATAAAAACTCTT
ATGAAGATGAAACCTAAAAGATTTTCATTGGGGCGTAACCTTCTCAGCGACGCGCCACATCGGATACAGGTTTCACCTCT
AGCCTACCCCAACTTGTTTGGAACTAAAGGTTTTGTTGTTGTTGTTGTAAAAAGAGGAAATATATGTTTTTTTAGTAGAA
GATGAAATATATGTAGCGACGTGTAGGCAAATTATGGGCCAAATGAGACCTGCGTCTAAACT-------AGCCA------
-TTTTCATTTGTGACATCTGGACTTCCGATAACCATTGGGCCGCGTCGTGAGCCTGTTTGAAACGCCGGGG-AAAAAGCC
CAAATGGGAGGGGTT-CTAAGGAATTACCGCCTTTTAGCCCTTGTTTTGATTTGTAGGATTTTAAAAATGTAGTAATAAT
AAAACACAAGAATATAATAGAATTTT--AGAGGGAGTATGTGCTAAACAAAGGGTTGTGAAACACTAGCAAAAAATTGAC
AAAAATGGTGTTGATTTGCAAGAATAGTGAGAACACAGTAAAAACACAGTCTAATGAACGTTAAAACACAAGTAAAAGTA
AGGTTAGATCGTTAACAACAACTTATGGCCTTTGCATTATTCTTTGCATAGAAATGCAAGAAAGTGGTTTGAGTGAATTG
TAAAATTCTTTCATTTTCCCTTTTAAACTCAAACCAAAGG-AAAAAAATCCTCTACTTTTCATATGTACAATTC
>chr2B_93
--------------------------------------------------------------------------------
-----------------AGAATTACTGAATCTTTGTAGTTTCTTGTTATTACTAGGAACTACAAAAGCTCTGGTACTGAT
TTTTCAGGTTGCAGATCTCCAAATTGCATG----TTTCTTTTTCAAACGTTAGAGCATGTCCAGATGCTGCTTCACT-GG
AGTTGGATCCATCAACAGGTTCGAACTAAACTTGAAATCTACCCTAGCACACCAAGACCACTCGTCCACT--CAGCACAA
AATGACAGGGCCTTTCTACTTGCGTTGACTGAAG--TCTCTCCTCTCCACAGTCCACACTCCCACAGTATACAGCCTCCA
AAGACTGTAGTGTCCCTTTATGCTATGGTTTAGGTGCCATAGCATCATTTTAGTACTCCCTCCAATCCATATTAATCGTC
GCTGATTAATCATGCCACTTTAACCTTTTCAGGGAAATATGAGTACAAATTAGTATAGCTATATTTGTAATGAGGATATA
TATGACTTGAGTCACTCGACATTGTG--CTCATTTTTCTGGAAATTACTTCTCCACAGTAGAACTGCTTACTG-------
AAGTCGACTGTGTGGTGCACGACGGCACACACATCCTTTCAGAGGAATGTGCAAGTGGGAGAATGAGAGAGACCCACTGC
CTGTAGCAAGTACATTCCTATCTGTAACATAATGATTTTCCACCAAAATGTTCTTGATATTGGTTTCTTTCCCGCTCATT
AGGATCTGAAATTCCCTCCAAGCTTACCAAGTTACTGGGTTTAATAATCAATTCCATCTCACTGCACCCCACAAGGCCCA
CCCTACTGATTAGTGATTACTAGAAGTAGATCGCTCAAGGTCAGATGAACTCATGCCAAGTAAAAGTTAACTTGACCACC
CCTTAGAATTTGAAAGGATCTCATCAGGCATACGTCAGCATACACTCCGAAAAGACCACCATGGGAAGGTGAGGAGAGAA
GGGAATTCCAAGCACCTATAAAATGACCCTATCCATCACATCTTCTGCAGCCA-AGTATATTTCATGGACGAACATGCAC
CTGAGATTCCAGTTGGTTATAGCAGTTCCGCCACTTCACCAGCCAGCAGCGTCTGGGAGAGTCACCAGATCCTACACATG
CATGCACCCTTCCCCTCATGGAGCCCCCACACCGGCACACTCCTTACCGCCGCTGCCACTGACCCGGCAACCTTCTGCGA
GGATCCCTTGTCACCAGCCCGCACACACCTTCCAAGCGGGCATCTATGGAACCAGACTGACCTGTGAGTATGCACGCCGT
ACACTTGTTGATGCTTGTTCAGTGACATCTGACAGAAGTT-GACCGTGAAACAACCTTTTCAGTAGCATGGGAGTTCATG
GGAGCAGCAACGAGCTTGGCGGGAGCAGTGGCCATGGAAAGGACTTCCTTTCCTTGCTCGAAGCGAGGACGGTGATGCCA
GAAATGCTCGATGATTTCTCCTCGGCGGCATGCGACTACCTCAAAGGGATGGACGGCAGCGACTACAACAGCATCTCCGG
ATCAGCTTCCTATGGTTTTGACAGTGGCGGTCCGTACGCTGGCCCCAGTGTTCTGCCCGTCAGGCGTGATGGGATTGCGA
GCTCTCCACCGGTGTACCTCGGGAACAGTACCTTGGTGCAAGAGAGCATGATGGGTTGCATGCCAAGCCACAACCACGAG
GTAAAACTAGATGGTTCCCAGCAGCAGGAGCTTGGAGCTCCCATGAATGCATTCCTGCACAAAACGCTTCCTACTAGTGT
TGCAATTCATGGAAGCCCTCTGGGTTATTCTGGCTCTGGGAGCGAAAGGGCTTTCCCGGAGGGCCGAGTAATGCAGGTTT
CGTTTGATGCTAGGATTTCACCAGATGCAATCTATGCTAGTGGTTACAGATCAAAAACAGAATTGGCACATACCAATCAG
TATGAGCAACGTACTATTTTGGTAAGGCTGGAATGCTAAATTGTATTGCTAAGTAACGGCAGAGTAGAAGTTATTGCTGT
TTACAATGTGCTCTACAATCTACCTGTGTACATATGATTCTTGAATTTGCAGGCAAGGACTGGTACAGGTCAAAGTGGTG
CTGCAGGTGATCCTAAGAAGAGAAAATCAGAGGAAAAGTTGGCAGGCAACGGAAAGAGGTCGAAGAAAGATACTTCAAGT
AGATCACCTCCCAAGGTAACTAACAATGAAGATTATTTGACGAACTGGTTTAAACTCTCTGAGAAGCATCCAATCAACTT
ATTTTGAGCCAAACACAGGCAGAAGTGCCTGATATGAAGTTGGGAGAGAGAGACAAGATCATAGCATTGCAGCAGATCAT
CTCACCGTATGGGAAGGTACAAATTCTGCAAGTATTGCTAAGTGAAAATAGTGAGATGACCTTCCATTCTTCTCTTTTTA
TTGCTAACTCCATCTAAAAGTTGTATTTTATCAGACGGATAGAGCGTCAGTGTTGTATGAAACCATCAAGCACATCGAAT
ATCTACATGAGCAAATACAGGTTGATATCATCATAATCCTTTTCAGATAAGCCGTATGTTTCGACTTACAGATGTTACTG
CCAAGGTTTCAAAG-AAATTTTCTGCAGCTGAGCCATGTAAATACGTCCTGTAGCATAA---AGATACAATGAAAACTCG
CACCGACGGTTTCACATTATCGTTGCATTTCACTAAGCATTTGCTACCTTGACTTGCTATGCCTGTTTGTTGGCGGATTT
CCATGCCATTCTTTTTCTTTCGAGAATGAGGATTTCCATGCCATGTCAAGTCTTGTCTAAAGAAAGATGATGTTGTCGTC
GTCTATAGAATAATTAACATAAAGAATAATGTCACTCACACAGTCACGAGTCACAACCAGCACTACACCTTTTCTAAAGT
TAGGTAATAATGCCAACTGTTAGTACCATGCTGACTGCTTTGCCCTTTTTCTGATTTGGACAGCTATTGAGTGAACCCTA
CATGAAGAATAGCACAAACGAGGTAGTGGCATGGAATTTCAGAGATACGTATTTTTCT--CTTTTCTAAACCGTCTTAAG
CGATACCCGGTAATGACTTGCTATCATCAACTCTTCTCAGGTGCCCTTTCAATGGGGAGGTAAAGAGGAGGACTTGAGAG
GCAGAGGGCTTTGCTTGGTCCCTGTTTCTTGCACCCCGCAAGTTTTCCAGGATAATAGCCTGCCGGACTGCTGGACGCCG
GTGTACAAGAGCTCCCGGTACCAATGATCCCAGCAATCGCATGTTTCCTTTATCACCTCTACTTGTCATGCTCACGAATT
GGTTGGGGTGTTTACGACTTTACGGGTAGTCGGTTATTTTGCTTGTGTTCTCCTTGTTTTTACTTTACTATACTAGTTTT
GTTTCAGGTGTATTGTATGGTGGCCGATGTGTAGTCTAGAATAACAAAGTTGTGGGTCTTAGATCTTTGACTTTGTACGA
AAACGGTGCCGATGCAGGCTTAGCACTCGCTAATAGGAGAACAGTAATAACTATTTCTGTCTTTTGAAGGTTGAACCGCA
CTGCTTGTACTTGATATTTCCATGGCATTTTACCCTTTGATTTGATTTGCTACTTGATGGCATGGCTGTTAGCACAGATA
TGCAGGTATGCACGTCCAAAAAA---------------------------------------------------------
-----AA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
GAGGAAATATATGTAGTGATGTGTAGGAAAATTATGGGCCAAATAAGACCTGCGTCTAAACT-------AGCTATTAGCC
CTTCTCATTTGCGACATCTAGACTTCTGATAACCATTGGGCCG--TCGTGGGCCTGTCTGAAACGCAGGGGAAAAAAGCC
CAAAGGGGAGGGGTTTCTAAGGAATCACCACATTTTAGCTCTTGTTTTGATTTGTAGGATTTTGAAAATGTAGTAATAAT
GAAACACAAGAATATAATAGAATTGTACAGAGGGTGTATGTGCTGAACAAAGGGTTGTGAAA---TAGCAAAACATTCAC
AAAAATGGCGTTGATTTGCAAGAATAGAGAGAACACAGTAAAAACACGGTCTAATGAAGGTTAAAACACAAGTAAAAGTA
AGGTTTGATCGTTAGCAACAACTTATGGCCTTTGCAGTATTCTTTGCATAGAAATGCAAGAACGTGGTTTGAGTAGATTG
TAAAATTCTTCCATTTTCCCTTTTAAACTCAAACCAAAGGAAAAAAAATCCTCTACTTTTCACATGTACAATTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S-S---S-------------S---S-SS----------
----------S---------------------------------------------------------------------
----------S-------------------SSSS--------------S-------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------------S---------------S--
---------------------------------------------------------------S------------S---
------------S----------S--------------------------------------------------------
-SS-----------------------------------------------------------------------------
-----S---S----------------------------------------------------------------------
----------------------S---------------------------------------------------S-----
-------------------------------------------------------------------------------S
-------------------------------------------S------------------------------------
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----------------------------------------------------------S---------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
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-------------------------------------S------------------------------------------
---S----------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
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-----------------------------------------------------------SSS----------S-------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------S-----
----------------------------------------------S---------S-SS----------S-----S---
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
------------S-----------S-------------------------------------------------------
S---------------------S------------------------------------------------------S--
--------S-------------S-------------------S-------S----S------------------------
----------------------------------------------S--S------------------S-----------
------------------S-----S----------------S--------------------------SSS--SSSSSSS
-SSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------S------------------SSSSSSS-----------
-------------------------------------S------S--S---------------S-----SS---------
-------------------------------------------------S------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------S-------------------------------
----S-------------------------S-------------------------------------------
>forward_317
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----------------------------------------------------------CACTCGTCCACTCTCAGCG---
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>reverse_1699
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------------------CCGGGAACAGTACCTTGGTG------------------------------------------
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--------------------------------------------------------------------------
>forward_1600
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GACTACAACAGCATCTCCGC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2918
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCACAGTCACGAGTCACAAC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_2164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ACAGGTCAAAGTGGTG
CTGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_3647
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GTGTTACTTGATGGCACGGC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
