>input_sequence_35082
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------ATGTGTGGAAAGATGGATGAGGTTCACCTCCACATGGAGCACAAGGTATGCTTTTCTTCAAGCTGGCCGGTAGC
AATCGATATATCTTTGCTTTGTCAAAATTAAAATGCTAATTTTCGAAGTATTGATATATAGTTCTCTCAAACCAATAATA
ACGTTGATAAGTCGATTTATCTTCGCTAATTTAGGATCTACCCGGTGGAGAATTTGGAGGAGTTCGTGCCTCAATGTCCA
AACCTCCAACGTCTGCCACTTCTAGGCCAAACAGCATGGTTGTCAAGGTAACTAGACTAAA---CTCGTCTTACAACCAA
CAAAGTTATTTTTTGAACACATGAATGAATAGTTCATATAAATATTTTGACCTCCAATTTGCAGAAAGTGTGCCCGCGAG
AGTACATCCCGCCACACATCGTGGCGGAGGCGATCTCGACGCTGCACGGCCTCGACCTGCGGTGGTCGGGGCCGATCACG
CCCAGCGAGCGGCTCTACGTGGAGCAGTACGTGATGGCCAAGTACCCGCAGTACTCCCACGGCCTCATCGAGGAGGAAAG
CTGTGACAAGGACGACCTCTACTCCACCTACTATAGCACCGGCTGCATGTCTGCCTCGCCGGAGGGCGGATCCGGCGAGC
GGCGGAGGCCGTCGCCGACGGGGTCGCCATCGTCAGCGAGGCCCGACATCGACATGGTCAGGCTGGAGCCGTCGCGTCTG
CTGGACATCCTCACCAAGAAGTCTTCCTTCACGGGGAGCTTCATCTCCATACCGGAGATCCAGGCCAGGAACAGGGTGCT
CCGGCACTGCGGGCTCACTGACGATGAGTACCTCGTGCTCTTCGCTGCCACGCCCAAGGACGCCATGATGCTGGTAGGTT
CAGTAGCAGCTTT-CTTTTTCTTTAAGAGAAAAGGGGTTTCCCTCCGCCCAATTTAACAGAAACAGT-GGCAAGAAAACA
AACTGTCCCAGCGCTAAGCAGAGCCAAAGTAGC--TGAGCTAGTAACAACTTTTTTTTCTAC------------------
--------------------------------------------------------------------------------
-AGAGGTCCTTGAACTACTACTCTATAAACTTTCATTGCATTACGTACCACAGTTACGTTTCTAAACCGAGTTTTTTTGT
T-------------GTTGAGAACCCCGGCCTGTGCATCATAT--------------------------------------
---------------------------------------------------------------------------TTTTA
AAGTTATCA--TGTGATTTATTCAAACGATTACATAATTACATAATAGTAGATGGTGACACAAATCCAAAAGACACACCA
GATCCACATACGGCCGAGAGGAGCATCTCCTCAAGAGATGCCAATCAATGTAGGGCTATATATAACTCAGCATCCCTAGA
AATTTTTTGAGGGGCAGCATAATATGTTTTAATGTGAGGATCTACAAAATCCTATTCCCTCCATAACTTAGTATAAGATA
TTTTTTGACACTGTTATAAACTATAAAAACATTTTATAAAAAGTTACCGAGGGAGTATAAAATTCTTGCAAGCCAAAAAG
GGCCTAATTGTCCAAGTACTTTTCGTCTGTCTTCACTTTGAG--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------TATCATTGAAT
GGTAGAAATTGTATTCAAAAAAA-TTCTCAATTGTGTAATTTT-AGTCACGTAACTTATACTCCCTCCGTCCCATAATGT
AAGACGTTTTTTTGGCACTACACTAGTGTCAAAAACATCTTACATTATGGAACGGAGGGAGTATATTGTTGGCCTAATTG
ATGGTCAAA-CTTAAAATCAAAATATATGCGTGATTTATTCTTTTCTTTTTTTGCGGCATGCGTGATTTATTCATTAAAT
TGAACGGAGTATGTAACTGGATCCACCTTAAATGTTGTACGCAGATCGGCGAGAGCTACCCTTTCTTCAGGAGCAACTAC
TACATGTCAATCCTAGCCGACGACCGCGACTGCATCCACGCATTTGCGGCGTACAAGGAGGCCAAGGTGATCGCGGCGCC
GGAGTCCTGGCTGGACCTCCGCATCAAGGGCTCGCAGCTCAGCCAGTACTTCCGCCGCAAGTCAAAACTCACGCATAAGG
GCCTCTTCGCCTACCCAGCCGTCTCCGCCGCAGCCCCTGCCGCCGACGACGGAATCGCCCCGCCACCGCCGCGCTACTCC
ATGCACTGGGTCTCTGAGGCGCACCGCAACGGGTGGCACGTGCTCCTGGACGCCACCGCGCTGGTCGTCGGCGAGGACCG
GCTGCCGCTGTCGCTGCACCGGCCGGACCTCGTTATGTGCACGCTCGACGACACGCACTCGCAGCAGCCGTCCGCCAAGG
TGACATGCCTGCTCGTCAGGAGGAGGTCCTTCGACGCCTCCGCCCTG------CCGCAGCCGCAGCAGAAACAGTGA---
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr3B_1_TraesCS3B01G156300
TCATAGACTTGACCTCATCCTGCTACAGCCTCAAGTCGCTCTTTGCGATCATGCCCTTTTTGAGCGTCAACACATGTCAT
GTAAAAACCACCATGATAGGATGCATTGGCATTAGCCTTGTAATACTTGAT------CGTCGGTCAGTTGGTTAGCCCTG
TGGGAGCGCAGGCTGCCCACCCTAGTTCGAGTCCCGACTCAGCCGAAGGAGTGCTTAGAGATTTTCTTCTATAAAAATAT
GTCGTTAAGGGCTAGTCCTAGCTGGCCTCCGTATAGTAGACCACTATCCAGCTAGACCAAGTCAATATACTTTGCATGGT
ACAGCACGCTATCGTATCATTTTTATATTCAGTTTTGACAGTTAAGTATGTCGCTGAACGGAATGGCTCTGTGTCGACAT
TTTTTGTACA--ACATTCACACCATACTCTCTGATCGAACGGACACGCAGTGCTGGCCAGCTAAGTTCGACGGTGCAGGT
GTTGCATCGGG-----CACACGTCAGACAAGAATCATCGTAGCCGAACTCGCTGTTGAGAT---ACTTTTACAGACTAAG
AAAGACCAAGCGGCCAATAATGGAGGCATGAGCACGGCATATACCTTTAGCTGGGTTCCATGGACCCATATTAATCAA--
----------------------------TTAGTTAATCAACCAATTAACAAATTAGCTGTCGTTGCGCGTCAGATAAAAC
AACATGGGGTTTCTTGTCAGCAAAACTAGTTTATGCCCCCATGAGAGGGACATCCGTATTTGTTATATGTTCAACAACTA
GTGCATAACCGGGGTGACAGCTTGCCCAACAAAAAATAGCCATTTCTTCCTTCTTCCTCCGAAACCAAACTCAGAAGCAA
CCAAGCCAGAGATCCAACATCTAAACCGAGGCGACCTTTCTTGCTACATATTCCTCTGCATCACGAACTTGTACTTACTT
GACTTCACCCTGCACCTCCACAGTCATCATATAGCTATTTGCCACTTCGTTGTCTTTCTAGGCCCATCAGATCAAGAACA
CACAGCATGTGTGGAAAGATGGATGAGGTTCACCTCCACATGGAGCACAAGGTATGCTTTTCTTCAAGCTGGCCGGTAGC
AATCGATATATCTTTGCTTTGTCAAAATTAAAATGCTAATTTTCGAAGTATTGATATATAGTTCTCTCAAACCAATAATA
ACGTTGATAAGTCGATTTATCTTCGCTAATTTAGGATCTACCCGGTGGAGAATTTGGAGGAGTTCGTGCCTCAATGTCCA
AACCTCCAACGTCTGCCACTTCTAGGCCAAACAGCATGGTTGTCAAGGTAACTAGACTAAA---CTCGTCTTACAACCAA
CAAAGTTATTTTTTGAACACATGAATGAATAGTTCATATAAATATTTTGACCTCCAATTTGCAGAAAGTGTGCCCGCGAG
AGTACATCCCGCCACACATCGTGGCGGAGGCGATCTCGACGCTGCACGGCCTCGACCTGCGGTGGTCGGGGCCGATCACG
CCCAGCGAGCGGCTCTACGTGGAGCAGTACGTGATGGCCAAGTACCCGCAGTACTCCCACGGCCTCATCGAGGAGGAAAG
CTGTGACAAGGACGACCTCTACTCCACCTACTATAGCACCGGCTGCATGTCTGCCTCGCCGGAGGGCGGATCCGGCGAGC
GGCGGAGGCCGTCGCCGACGGGGTCGCCATCGTCAGCGAGGCCCGACATCGACATGGTCAGGCTGGAGCCGTCGCGTCTG
CTGGACATCCTCACCAAGAAGTCTTCCTTCACGGGGAGCTTCATCTCCATACCGGAGATCCAGGCCAGGAACAGGGTGCT
CCGGCACTGCGGGCTCACTGACGATGAGTACCTCGTGCTCTTCGCTGCCACGCCCAAGGACGCCATGATGCTGGTAGGTT
CAGTAGCAGCTTT-CTTTTTCTTTAAGAGAAAAGGGGTTTCCCTCCGCCCAATTTAACAGAAACAGT-GGCAAGAAAACA
AACTGTCCCAGCGCTAAGCAGAGCCAAAGTAGC--TGAGCTAGTAACAACTTTTTTTTCTAC------------------
--------------------------------------------------------------------------------
-AGAGGTCCTTGAACTACTACTCTATAAACTTTCATTGCATTACGTACCACAGTTACGTTTCTAAACCGAGTTTTTTTGT
T-------------GTTGAGAACCCCGGCCTGTGCATCATAT--------------------------------------
---------------------------------------------------------------------------TTTTA
AAGTTATCA--TGTGATTTATTCAAACGATTACATAATTACATAATAGTAGATGGTGACACAAATCCAAAAGACACACCA
GATCCACATACGGCCGAGAGGAGCATCTCCTCAAGAGATGCCAATCAATGTAGGGCTATATATAACTCAGCATCCCTAGA
AATTTTTTGAGGGGCAGCATAATATGTTTTAATGTGAGGATCTACAAAATCCTATTCCCTCCATAACTTAGTATAAGATA
TTTTTTGACACTGTTATAAACTATAAAAACATTTTATAAAAAGTTACCGAGGGAGTATAAAATTCTTGCAAGCCAAAAAG
GGCCTAATTGTCCAAGTACTTTTCGTCTGTCTTCACTTTGAG--------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TATCATTGAAT
GGTAGAAATTGTATTCAAAAAAA-TTCTCAATTGTGTAATTTT-AGTCACGTAACTTATACTCCCTCCGTCCCATAATGT
AAGACGTTTTTTTGGCACTACACTAGTGTCAAAAACATCTTACATTATGGAACGGAGGGAGTATATTGTTGGCCTAATTG
ATGGTCAAA-CTTAAAATCAAAATATATGCGTGATTTATTCTTTTCTTTTTTTGCGGCATGCGTGATTTATTCATTAAAT
TGAACGGAGTATGTAACTGGATCCACCTTAAATGTTGTACGCAGATCGGCGAGAGCTACCCTTTCTTCAGGAGCAACTAC
TACATGTCAATCCTAGCCGACGACCGCGACTGCATCCACGCATTTGCGGCGTACAAGGAGGCCAAGGTGATCGCGGCGCC
GGAGTCCTGGCTGGACCTCCGCATCAAGGGCTCGCAGCTCAGCCAGTACTTCCGCCGCAAGTCAAAACTCACGCATAAGG
GCCTCTTCGCCTACCCAGCCGTCTCCGCCGCAGCCCCTGCCGCCGACGACGGAATCGCCCCGCCACCGCCGCGCTACTCC
ATGCACTGGGTCTCTGAGGCGCACCGCAACGGGTGGCACGTGCTCCTGGACGCCACCGCGCTGGTCGTCGGCGAGGACCG
GCTGCCGCTGTCGCTGCACCGGCCGGACCTCGTTATGTGCACGCTCGACGACACGCACTCGCAGCAGCCGTCCGCCAAGG
TGACATGCCTGCTCGTCAGGAGGAGGTCCTTCGACGCCTCCGCCCTG------CCGCAGCCGCAGCAGAAACAGTGAATG
GAGTGGTGATTCG---GTCTCGCCCTCGCTAACACAAACTACTGCTGTCACCGTCTCATCGTGCGCGATGTGCTTGCATG
CATGTCCCGCAAAATAAAGCTGCACG----GATCTGCTTGTCTATGAGTAAG----GTGTGTGTGTATGTTTGAGCACGA
ATAGTTTCGGGGTTCTCGGAAGACGGAACACATGTACATCTAAATTGGTTATGTTCATCGTTTTATATCTAAGCGAAAAC
AG---TACCCCCTTTTCTTACACGCAAGCGGAAACAATACTCCCAACCCTAACCACCGCCGCCACTCTGAACATTTTTTT
TTCAAATACATGTTTGAATATATTTTAATGCATGTTAAAACTTTAAATAAACGTGAACTTTTTTCGAATAGATGTGAAAT
AGGTTTTCATACACATTGAACATTTTTTT--AAAATACATGATGAAAAAATTTGTTTTGCGGCGTAATGTAGATTTTTCC
AAATACTTGCGAAATTCCTTTTGATACACATTTCACATTTTTCAGTTACAAATGAACATTTTTCCACATACATGTTTGAA
CATTTTTCTGAAAATATATAAACATTTTTTCAATGGTATGGAACACTTTCTAAAATTATGTGAAAATTATTTTTTACATT
TTATAAGCATTTTTGCGAAAT-TCATGAACATATATTTGAAATCCTTGGACCTTTTTTTGTTGTCACAAACTTTTTTTTA
AATGGTATGAAT--TATTTTTTATAAATCATGAAAACATTTTCTTTACATTGTATA-AAAAATTGGAACGCATGAAATAC
TTTAAATGTCATGAATTTTTTAATGTACAGATTTTTTTTGAAAATTCCATGAACAAAACTTCTACACCGTGTCAGTATTT
TTT--CATATGTGTGGTGAATTAAAAAAATTGGTTTTTTGAATATACAAATTTATAATATTTCAAAATAAAAAAAAGTTA
AAAGGAAAGAAAAGAAAAGGTAGAGAGGAAAGAACCGACGAACACCCCTGGGTAGGGAT
>chr3D_83
AAAAAACG------------------------------------------------------------------------
----------CCATAATAGGATGCATTGAGAGTAGCCTTATCATACTTGACTGCCACCGCCGGTCAGTTGGTTAGCCCAG
CGGGAGCACAGGCTGCCCACCCTGGTTCGAGTTCCGACTCAGCCGAAAGGGTGCTTAAAGATTTTCTTCTATAAAAATAT
GTCGTTAAGGGCTAGTCCTGGCTGGCCTCCGTATACTAGACCACTATCCCGCTAGACCAAGTCAATATACTTTGCATGGT
ACAGCACGCTATCGTATCACTTTTATATTCAGTTTTGACAGTTAAGTATGTCGTTGAACGGAATGGCTCTGTC-CGACAT
TTTTTGTACA--ACATTCACACCATACTCTCTGATCGAACGGACACGCAGTGCTGGCCAACTAAGTTGGACGGTGCAGGT
GTTGCATCGGG-----CACACGTCAGACAAGAATCATCGTAGCCGAACTCGCTGTTGAAAT---GCTTTTACAGACTAAG
AAAGACCAAGCGGCCAATAATGGAGGCATGAGCACGGCATATACCTTTAGCTGGGTTCCATGGACCCATATTAATCCA--
----------------------------TTAGTTAATCAACCAATTAACAAATTAGCTGTCGTTGCGCGTCAGATAAAAC
AACTTGGAATTTCTTGTCAGCAAAACTAGTTTATGCTCTCATGAGAGGGACATCAATATTTGTTATATGTTCAACAACTA
GTGCATAACCGGGGTGACAGCTTGCTCAACAAAAAATAGCCATTTCTTCCTTCTTCGTCCGAAACCAAACACAGAAGCAA
CCAAGCCAGAGATCCAACATCTAAACCGAGGCGACCTTTCTTGCTACATACTCCTCTCATCACC-----TGTACTTACTT
GACTTCACCCTGCACTTCCACAGTCAT---ATAG---GTTGCTACTTCGTTGTCTTTCTAGA-CCACCAGATCAAGAATA
CGCAGCATGTGTGGAAAGATGGATGAGGTTCACCTCCACATGGAGCACAAGGTATGCTTTTCTTCAAGCTGGCCGGTAGC
AATCGATCTATCTTTATTTTGTCAAAATTAAAATGCTAATTTTCAAAGTATTGATA----GTTCTCTCAAATCAATAATA
ATGTTGACAAGTCGATTTCTCTTCGCTAATTTAGGGTATACCGGGTGGAGAATTTGGAGGAGTTCGTGCCTCAATGTCCA
AACCTCCAACGTCTGCCACTTCTAGGCCAAACAGCATGGTTGTCAAGGTAACT-GGAATAATTTCTCGTCTTACTATCAA
CAAAGTTGCTTTTTTAACACATGAATGAATAATTCATAGAAATATTCTGGCC--------GCAGAAAGTGTGCCCACGGG
AGTACATCCCGCCGCACATCGTGGCGGAGGCGATCTCGACGCTGCACGGCCTCGACCTGCGGTGGTCGGGGCCGATCACG
CCCAGCGAGCGGCTCTACGTGGAGCAGTACGTGTTGGCCAAGTACCCGCAGTACTCCCACGGCCTCATCGAAGAGGAAAG
CTGTGACAAGGACGACCTCTACTCCACCTACTATAGCACCGGCTGCATGTCTGCCTCGCCGGAGGGCGGATCTGGCGAGC
GGCGGAGGCAGTCTCCGACGGGGTCACCATCGTCGGCGAGGCCCGACATCGACATGGTCAGGCTGGAGCCGTCGCGTCTG
CTGGACATCCTGACCAAGAAGTCTTCCTTCACGGGGAGCTTCATCTCCATACCGGAGATCCAGGCCAGGAACAGGGTGCT
CCGGCACTGCGGGCTCACCGACGATGAGTACCTCGTGCTCTTCGCCGCCACGCCCAAGGACGCCATGATGCTGGTAGGTT
CAGTAGCAACTTCCCTTTTTTTTCCAAAGAGAAGGGGGTTCCCTCCGCCCCATTTTTTT-AGAAACAAGGCAAGAAAACA
AAACTGTTCCCAG----GATGAGCCAAAGTAGT--TGAGCCAGTAACAACTACTCCCTCCATCTAAGTTTACTTAGTATT
AAATTTGTGAAAAAAACCTTAGTATTAAATCAGCGACACTTATTTTAGAATGAATAGAGTATTTTCTATAGTTTCATTCG
TAGAGGTCTTCGAACTGCTACTCACTAAACTTTCTTTGCTTTACATACCACAGTTACGTTTCTAAACCTACGTTTTTTTT
CTATCCTAAAGGAGGT--AGAGACCCGGCCTCTACATTATAT--------------------------------------
---------------------------------------------------------------------------TTTTA
AAGTTATATCCTGTGATTTATTCAACGACTG-CAGAA-----------TAGATGGTGACACAAATCAAAAAGACACACCA
GATGCACATACGGCCACGAGGAGCATCTTCTGAAAAGATGCCAATCAATGTGGGGCTATATATAAATCAACAACCCTAGA
ATAA-TTTGAGGGGCACCCGAGTATGAATTACTGTGAGAATCTACAAAATCC----------------------------
-------------------------------------------------------AATAAAATTCTCGCAAGCCAAAAAG
AGCCTAAATGTCTAGGTA------GTCTGTTTTCATTTGCAATGTGTCTTAGACTCATAGTC---GCCTATTAAGTATTT
ATTTTCTAGAATATACACGAGCGTGTATATCATATGTTGATAGGAAAATAAGGGTGAAGAAACCCTCAACCAAGGTTTGT
AAGAACCCGGTTTTACTAGGCTAGTAGCCTAGTAAGATGTATTGCCTTTGTTCCAGTAAATAAAGTGCGCGCATTTAATT
TAGGACCCTTATAATTCCCGAACGTTTGAATTTTAAGCATTCCTTCCAAACGTTTTTTCATGGCAACTTTAGTTGACACG
AGGTGGCAACTTTAGTTGTTAAAACATGACAATTTTGTCTCAATTCTTTTTTGTCAGAAAATTACCATGTTTACCAACCT
CACGTGAACTAAAATTGCCACGAAAAGTGTTTGGGTTGCCATGCTTAAAATCCAAATGTTCGGGATTTATCATTGGCCTT
AATTTAAGATATAGCTTTACCAATGAATTTACC-AATAAATTATGAGTTAATGGCGACAAATATTATAATACCATTAAAT
GGTCGAATTTGTATTGAAAATAAGTTTTCAATTGTGTGATTCTAAGTCACGTGACTTATCTGT-----------------
---------------------------------------------------------------TATTGA---TCTAATTG
ATGGTCAAAATTGAATTTGAAAATATGAGTATGCCTT-----------------------------------------AA
TGGAGGGAGTATATAACTGGATCCACCTGAAATTTTGCACGCAGATAGGCGAGAGCTACCCCTTCTTCAGGAGCAACTAC
TACATGTCAATTCTAGCCGACGACCGCGACTGCATCCACGCATTTGCGGCGTACAAGGAGGCCAAGGTCATCGCAGCACC
GGAGTCCTGGCTGGACCTCCGCATCAAGGGCTCACAGCTCAGCCAGTACTTCCGCCGCAAGTCAAAACTCACGCATAAGG
GCCTCTTCGCCTACCCAGCCGTCTCCGCCGCAGCCCCTGCCGCCGACGACGGAATCACCCCGCCACCGCCGCGCTACTCC
ATGCACTGGGTCTCCGAGGCGCACCGCAACGGGTGGCACGTGCTCCTGGACGCCACCGCGCTGGTCGTCGGCGAGGACCG
GCTGCCGCTGTCGCTGCACCGGCCGGACCTCGTGCTGTGCACGCTCGACGACACGCACTCGCAGCAGCCGTCCGCCAAGG
TGACATGCCTGCTCGTCAGGAGGAGGTCCTTCGACACCTCCGCCCTGCCGCCACCGCAGCCGCAGCAGAAACAGTGAATG
GAGTGGTGGTGATTGAGTGTCGCCCTTGCTAACACAAACTACTGCTGTCGCCGTCTCATCGTGCGTGATGTGCTTGCATG
CATGTCCCGCAAAATAAAGCTGCATG----GATCTGCTTGTCTATGAGTAAG----GTGTGTGTGTATGTTTGAGCACGA
ATTGTTTCGGGGTTCTCGGAAGACGGAACACATGTACATCTAAATTGGTTATGTTCATCGTTTTATATCTAAGCGAAAAC
AG---TACTCCCTTTTCTTACACGCAAGCGGAAACAATACTCCC----CTAACCGCCGCCCCCACTTTGAACATTTTT--
TTCAAATACATGTTTGAATATATTTTAATGCATGCTAAAAAATTAAATACACGTGAACTTTTTTCGAATAGATGTGAAAT
AGTTTTTGATACACATTGAACATTTCTTAAAAAAATACATGATGAACAAATTTGTTTTGCGGGGTGATGTACATTTTTCC
AAATACTCGTCAAATTCTTTTTGATAGACATTGAACATTTTTAAATTACAAATGAACATTTTTCCACATACATGTTCGAT
TTTTTAGTAC-----ATATTAACATTTTTTCAATGGTACGGAAAACTTTCTAAATACGTGAAC-----ATTTTTTACATC
TTATAAGCATTTTTGCAAAATGTCATGAACGTACATTTGAAATCCTTGGACCTATTTTAGTGTCACAAACA--TTTTCTA
AATGGTATGAAATATATTTTTTATAAATCATGCGAGCATTTTCTTTACATTGCATACAAATTTTGAAACGCATGAAAAA-
TTTAAATGTCATGAATTTTTAAATGTATGGATTTTTTTAAAAAAATACAC-----AAACTTCTACACCGCATGAGTATTT
TTTTCCATATGCGTGGTGAATTAAAAAA---------TTGAATATATAAATTTATAATATTTCAAAATAT-AAAAAGTTA
AAAAGAAAGAAAAAGGA----------GAAAGAACCAGCGAACACCCCTGAGTAGGGAT
>chr3A_275
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCACTATACCGCTAGACTAAGTCAATATACTTTGCATGGT
GCAGCACGCTACC-TAGCACTTTTAAATTTG---TTGATAGTTAAGTATGCCGTTGAACGAAATGG---------GACAT
TTTCTGTACACAACGTACACACCATA--CTCTGATCGAACGGACACATAACGCTGGCCAAGTAAGTTGGACGGTGTAGGT
GTTGCATCCGGCACCGCACACGTCAGACAAGAATCATCGTAGCAGAACTCGCTGTTGAAAAAACACTTTTACAGACTAAG
AAAGACCAAGCGGCCAATAATGGAGGGATGAGCACGGCATATACCTTTAGCTGGGTTCCATGGACCCATACTAATCAATT
AGTTAATCAACCGATCCTCAAAAAAAATTTAGTTAATCAACCAATTAACAAAATAGCTGTCGTTGCGCGTCACATAAAAC
AACTAGGGATTTCTTGTCAGCAAAATTTGTTTATGCTCCCATGAGAGGGACATCCATATTTGTTATATGTTCAACTACTA
GTGCACAACCGGGGTGACACGCGCATAA--AATAAAGAGCCATTTCTTCCTTCTTCCTTCGGAACCAAACTCAGAAGCAA
CCAAGGCAGGGATCCAACATCTAAACCGAGGCGACCTTTCTTGCTACATATCCCTCTGCATCACGACCTTGTACTTACTT
GACTTCACCTTGCACTCCCACAGTCAT---ATAGCTAGTTGCCACTTGGTTGCCTTTCTAGA-CCATCAGACCAAGAACA
CACAGCATGTGTGGAAAGATGGATGAGGTTCACCTCCACATGGAGCACAAGGTATGATTTTGTTCAAGCTGGCTGCTGGC
AATCGATCTATCTTTGTCTTGTCAAAATTAAAATGCTAATTTTTGAAGTTTTGGTA----CTTGTCACAAAACAAAAATA
GTGTTGACAAGTCGATTTATGTTCACCAATTTAGAGCCTACCCGGTGGAGAATTTGGAGGAGTTCGTGCCTCGATGTCCA
AACCTCCGACGTCTAGCACTTCTAGGCCAAACAGCATGGTTGTCAAGGTAACTTGGATTAGTTTCTCGTCTTAGAATCAA
CAAAGTTGTTTTATGAACAGATGC----ATGATTCAGAGAAATATTTTGGCCCTCAATTTGCAGAAAGTGTGCCCACGGG
AGTACATCCCGCCGCACATCGTGGCGGAGGCAATCTCGACGCTGCACGGCCTCGACCTGCGGTGGTCGGGGCCGATCACG
CCCAGCGAGCGGCTCTACGTGGAGCAGTACGTGATGGCCAAGTACCCGCAGTACTCTCACGGACTCATTGAGGAGGAAAG
CTGTGACAAGGACGACCTCTACTCCACCTACTATAGCACCGGCAGCATGTCTGCCTCGCCCGAGGGCGGATCCGGCGAGC
GGCGGAGGCCGTCGCCGACGGGGTCCCCGTCGTCGGCGAGGCCTGACATCGACATGGTCAGGTTGGAGCCGTCGCGTCTG
CTGGACATCCTGACCAAGAAGTCTTCCTTCACGGGGAGCTTCATCTCCATACCGGAGATCCAGGCCAGGAACAGGGTGCT
CCGGCACTGCGGACTCACCGACGATGAGTACCTCGTGCTCTTCGCCGCCACGCCCAAGGACGCCATGATGCTGGTAGGTT
CAGTTGCAACTTCCTC--TTCTTTTTAAAGAAAAGGGTATCCCTCCGCCCCATTTTTATCAGAAACAAGGCAAGAAAATA
ACCCT-----CAG----GCAGAGCCAAAGTAATAGTGATCTAGAAAATTCTTATCTTTCTTTACAGAAGGAG--------
--------------------------------------------------------------------TAGATAAATTAA
TAGAGGTCCTTGAACTACT-CTCTCTAAACTTCATTGCTTTTACATATGACGGTTAACTGGGTT--------TTTTTTTC
ATATCCTAAAGAAGGTTGAGAACCCCGGCCTTTGCTGGCTTGAAGAGAGTCCTAGTTTTCTAGTTTGCCTTTGAGCAGAT
TGTAACCAAATGTTAGTTGATTAATGAAGCTTCCAATTTCGATGCAAAAATTAAAAACCCGGCCTGTACATCATATTTTA
AAGTTATCA--TGTGATTTATTCAAACGATTACATAA-----------TAGATGGTGACACAAATCCAAAAGACATACCA
AATGCACATACGGCCACGAGGAGCATCTTCAGGAAAGATGCCGAT-AATGTAGGGCTATATATAAATCAGCAACCCTGGA
ATTTTTTTGAGTGGCAACAGAGTATGTTTTATTATGAGAATCTACAACATCC----------------------------
-------------------------------------------------------TATAAAATTCCTGCAAGCCAAAAAG
GGCCTAAATGTCCAAGTACCTTTTGTTTGTCTTCACTTGCAATGTGTCTTTATGCTCATAGTAAAGCCTAGTAAGTATTT
AC------------------------------------------------------------------------------
------------------------------------------TGCCTTCATTCAAATAAATAAGTCGCACTCATTTAAGA
TCTAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTTACCAATGAATTTACCCAATAAATTATGAGTTATGTGTGACAAATACAT--ATACCATTGAAT
CCTTGAATTTGTATTCAAAAAAAGTTCTCAATTGTGTACTTTTAAGTCACGTAACTTATATGT-----------------
---------------------------------------------------------------TATTATTGGTCTAATTG
ATGGTCAAAACTGAATTTCGAAATATGAGTGTGCCTTAAT--------------------------------CATTAGAA
TGGAGGGAGTATATAATTGGATCCACCTGAAACTTTGTACGCAGATAGGCGAGAGCTACCCCTTCTTCCGGAGCAACTAC
TACATGTCAATCCTAGCCGACGACCGCGACTGCATCCACGCATTTGCGGCGTACAAGGAGGCCAAGGTCATCGCGGCGCC
GGAGTCGTGGCTGGATCTCCGCATCAAGGGCTCACAGCTCAGCCAGTACTTCCGCCGCAAGTCAAAACTCACGCACAAGG
GCCTCTTCGCCTACCCAGCCGTCTCCGCCGCAGCCCCCGCCACCGACGACGGAATCGCCCCGCCACCGCCGCGCTACTCC
ATGCACTGGGTCTCCGAGGCGCACCGCAACGGCTGGCACGTGCTCCTGGACGCCACCGCGCTGGTCGTCGGCGAGGACCG
GCTGCCGCTGTCGCTGCACCGGCCGGACCTCGTGCTGTGCACGCTCGACGACACGCACTCGCAGCAGCCGTCCGCCAAGG
TGACATGCCTGCTCGTCAGGAGGCGGTCCTTCGACACCTCCGCCCTG------CCGCAGCCGCAGCAGAAACAGTGAATG
GAGTGGTGATCCG---GTCTCGCCCTTGCTAACACGAACTACTGCTGTCGCCGTCTCATCGTGCGTGATGTGCTTG----
CATGTCCCGCAAAATAAAGCTGCATGCACGGATCTGCTTGTCTATGAGTAAGGGGTGTGTGTGTGTATGTTTGAGCACGA
ATTGTTTCGGGGTTTTTGGAAGACGGAACACATGTACATCTCAACTGGTTATGTTAATCGTTTTATATCTAATAAGGCGA
AACAATACTCTATTTTCTTCCACATAAACGGAGACAATACTCCCAACCCTA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>SNPs
SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----S-------------SS-S-------S-S--------S--------S------------------S-
S------S---------------S--------S--------------S-S-------S----------------------
-------------------S---------------S-------------S------------------------------
-------------------S---------------------------------S------------------SS------
-----------------------------------------------------------S-------S------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----S---------------------------S------------------S------------------------
-------------------------S------------------------------------------------------
------------------------------------------------------------------S-------------
---------------S-----------SSS-------S-----------------------SS-----------------
--------------------------------------------------------------------------------
-------S--------S---------------------------------------SSSS-----------S--------
-S-----S---------------------------S--------------------------------------------
-----------------------------------------------------S-SS-S-----------------S---
-------S-----------------------S------S----------S--SS---------------------S--S-
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--------S---------------------------------------------
-----------S--------------------------------------------------------------------
------------------S--------------------------S----------------------------------
--------S---S-----------S-S-----------------------S----SSSSS-S-S-SS-------------
---SSSSS-SSS-SSSS---------------S-------------------S-S------S------------------
--------------------------------------------------------------------------------
------------------------S---------S----S----S-----------------------S-SS------S-
S------------------------------S-----S------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SSSSSSSSSSS--------------------------------
---S-----------SS-----------S--S--S------------------------------S------S-------
-S--------------S--S-S---------S------S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
-------S-----------S---S--------------SS-S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
---S---S----------------------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-------
------------S--SS---------SS-S---SS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S
--S-S-------S---------------S----S------------S--------------S------------------
--------------------------------------------------------------------S-----------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------SS---------------------------------------------
-----------------------------------S--------------------------------------------
----------S---------------S----------------------S---------------S--------------
------------------------S-------------------------------------------------------
--S-----------------------------------------------------------------------------
--------S---------------------------------------------S-----S-----S-----------SS
----------------------------------S-----SS-------S------------------------------
--S----S-----------------S--S-----------------S---------------S--S-----S--------
-------S-SS------S--------S-----SS--------S-S-------------------------------S--S
SS---SSSSSSSSSS----S------------------S----S----------SSSS--SSSSSSSS-----------S
----------------S-------------S--S-------------------S----S--SSSSSS--SSSS----S--
-----------S--------------------SS-S----------------S-------SS---S-----------S-S
--------------------S------SS---------SS----S-S--SSSSSS--------------SS-S-------
-----------S----------------SSSSSSSSS---------S----------------------SS---------
---S---------SSS-SSSSSSSSSS---------SS------------S--------
>forward_30
----------GACCTCATCCTGCTACAGCC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
AGTACATCCCGCCACACA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_539
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TAGCCGAACTCGCTGTTGAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_2017
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------AGCAGAGCCAAAGTAGCTGA--------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_2014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AAAACA
AACTGTCCCAGCGC------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_4243
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AGTTTCGGGGTTCTCGGAAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
