>input_sequence_35060
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------ATGAGGCGTGCGGCTGAGACGGACATTTTAAGGTCGTTTG
GTGCGTTTGGCGTCTCCAACCCTATTCAGACATGTATGTTCGTTTTGCCATCCATTGTCATTCGAAACGGACAAAATTTG
GACAAATTGGACGTCCGTTTGAGGTCGTGCGGTGAAGTTGGCCTTATTACACGTGTAGTGCTGAGCGTCCGGACGGAAAC
CTTCCGGAGGGAGCCGAGCCACCAGCGAGGTGGCCGTGTCCTCTCCCCTGTTCCAATGGCGCGCCGCCGCGTGCTCCTCT
ACCTCAAGCCCTTCGATGTCTACCCTCCGCGCCCTCTCTCCGGCGCCTCCTCCCTCACCTTCCCGCCACCGCCTCCGCCG
CCGCGCGCCGCCAACCCCAAGGTCCGCACATGTCTCGCCCACCCTCTCCCTTTCGAGAAACCTTGGTTACGCCGGCGTTC
ATGGTTGTCGATGCGTCCGAGGGGGTTCCCCGTTGACTCCCAAGTTCCCGTGCTCCGGCGGCCCGTTGGGATAAATCGGT
GGTGGAGTGGAGTTCACCTAGTCGTTCAGAAATCGTGAACTTGCGCTGGTGAACCGATGTTTTTTCAAGGACCGTGCTTG
CGCTGATCCATTGTTGTCTGTGAGCGTCTTTGGCGTCTGGCTGTTTGTTTTTTCATCTCCATTTTAGTTACAATACATGT
GGTTTGATCTTTCCATGTGCTGGCACGGAGCACACCAGCTGTTTGTTGAAATACATGTGTGGAGTATGAGCTCTGGCCAG
TGACTAGGACTCTAGGCGCTGTGTTGTATGAACTGGTGGGTACCAGGAGTCCTTGCTAGGCTACAATGTGGACTTCCAGT
TGGATCTCAGCCTCAATTACTGTCCGTTATTGAGAAATCTGCCATCTTGCTTGTCAAATCAACATCTGTTAGTACTACTG
GGAAAAGTTGCATAACTAGCTGAATCTAACAAGTTTCATTTCCCACTTTCTTGCTGCATAACCATTTTTACCGACATGAA
TTAAGGGTTTCGTGCCTCTTATCGTCAATTTAATGTCTTGCTGCAGATCTTAAGTTATCTGGATGATCGATGCAGAGTCC
ACAAGGACACAATCAATCTCTGTAAGAGTATACTACAGCGCAAGCCCCTTGACTGGATCTCAGTGCAGCGAAATCATTTG
ACAAATCCAATACGTGATGTGGATCTTGTTATTACCGTTGGTGGTGATGGCACACTTTTACGGGCTAGCCATTTTTTGGA
TAGCTCGATTCCCATTTTAGGTGTTAATTCGGATCCTACTTGTTCTGATGAGGTTAGTTCTTTCCATGATTGACAATAAT
CATCTATTGAAACCAATCACATTAGCAATGCTTGTTGACTA-CATTTGCATATGTTCTTCTTTGCACGCTTCTAAGCAGA
CTAATGGTCATACATGTGCTTGATGTGTATGTGTATGGTTTTATAACTCCATGCAGGTTGATGAGTTAACTGAGGAATTT
GATGCAAGAAGAAGCACCGGATATCTTTGTGCAGCTACTGCCTGGAACTTCGAGCAGGTATGTCGCTGTTGCCTAGTCTT
CTTGCTTGGGGATCTCAATTCATTTTCTTACAGAAATCACACCACTCTGCTTTCTGTTATAGCGTCGGAACATTTACTGA
ATTTCTTGAATGTTACTGTTCTCTTGAACATGACATATTCTCAGATACTTGACGCAACCCTTGCTGGCAGTAGACACTAT
TCAGAGCTGTCAAGAATATCAGTGAAACTAAATGGATCCCAGCTACCGACTTATGCTCTGAATGATATATTGGTGTCACA
CCCCTGTCCGGCAAGTGTGTCGCGCTTCTCATTAAGGTACTGACTTTGAGCCTTTCTGTAAATATTGATGAC-TTCTGTG
ATCAATTCTAACTGGCATTACCATTTCAGAAAAAGAAGCAATGGGGAGACCTCACGTTTGATTAATTCTAGATCAAGTGG
TCTCAGGGTCGCAACAGCTACTGGATCAACTGCTGCCATGCTATCAGCAGGAGGATTTATGATGCCAATATCAAGTCGTG
AGCTTCAGTATATGATAAGGGAGCCCATTTCACCAACGGATGCCGACAAACCACTGCTGCATGGATTAGTTAAGCAAGAG
CAACATATGCTTGTTGTTTGGTACAATCAAGAGGGTGCTGTGTATATTGATGGTTCTCATGTAACATATCCAATCCAGCA
TGGGGATACACTTGAGATCTCCTCAGATGCTCCAGTCTTAAAAGTTATTTTACCAGAATATCTGTTAAAGCAGGCATCTT
TATAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5A_1_TraesCS5A01G186600
GAGGCAAAATCGGACACGAGCTGGACGTTTTTTGCGTCCCTGCTGTCCGCTGTGTTCGTCTGCACATGGGTCTGCCCCCC
TGTCATTGAAAGCAGAGGGACCCACCCAACCACCCACCCATCCCCTCTCTCTCTCCTTCATTTGCACTGTTCCTTGCATA
GCTCGTCGACGCCGCCGGAGCAGGGCACAAGTACGCATGCCAGCCACTGGCGCTTGGACCGGAGCGGCGCGGCGTCGGCC
GGAGCAGGGGAGGACGGCAGCGGGGCGAGGCGAGGCGCGCGCGGGCGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGCGGCGCGAGCGCGGAGCGGGTGGGGCGCGGGCTCGGCCTGGGCGA
CACAGGCAGGGTGCGAGCAGGGTGGCGACGGCGAGCGGGCAGGAGTGAGCGGGCGCGAGGGCAGACGAGCTTGGCATCGG
CGGCTGCACCGACAGAGCGAGAGCACGAGCTCACGGGCGGATGAGGCGTGCGGCTGAGACGGACATTTTAAGGTCGTTTG
GTGCGTTTGGCGTCTCCAACCCTATTCAGACATGTATGTTCGTTTTGCCATCCATTGTCATTCGAAACGGACAAAATTTG
GACAAATTGGACGTCCGTTTGAGGTCGTGCGGTGAAGTTGGCCTTATTACACGTGTAGTGCTGAGCGTCCGGACGGAAAC
CTTCCGGAGGGAGCCGAGCCACCAGCGAGGTGGCCGTGTCCTCTCCCCTGTTCCAATGGCGCGCCGCCGCGTGCTCCTCT
ACCTCAAGCCCTTCGATGTCTACCCTCCGCGCCCTCTCTCCGGCGCCTCCTCCCTCACCTTCCCGCCACCGCCTCCGCCG
CCGCGCGCCGCCAACCCCAAGGTCCGCACATGTCTCGCCCACCCTCTCCCTTTCGAGAAACCTTGGTTACGCCGGCGTTC
ATGGTTGTCGATGCGTCCGAGGGGGTTCCCCGTTGACTCCCAAGTTCCCGTGCTCCGGCGGCCCGTTGGGATAAATCGGT
GGTGGAGTGGAGTTCACCTAGTCGTTCAGAAATCGTGAACTTGCGCTGGTGAACCGATGTTTTTTCAAGGACCGTGCTTG
CGCTGATCCATTGTTGTCTGTGAGCGTCTTTGGCGTCTGGCTGTTTGTTTTTTCATCTCCATTTTAGTTACAATACATGT
GGTTTGATCTTTCCATGTGCTGGCACGGAGCACACCAGCTGTTTGTTGAAATACATGTGTGGAGTATGAGCTCTGGCCAG
TGACTAGGACTCTAGGCGCTGTGTTGTATGAACTGGTGGGTACCAGGAGTCCTTGCTAGGCTACAATGTGGACTTCCAGT
TGGATCTCAGCCTCAATTACTGTCCGTTATTGAGAAATCTGCCATCTTGCTTGTCAAATCAACATCTGTTAGTACTACTG
GGAAAAGTTGCATAACTAGCTGAATCTAACAAGTTTCATTTCCCACTTTCTTGCTGCATAACCATTTTTACCGACATGAA
TTAAGGGTTTCGTGCCTCTTATCGTCAATTTAATGTCTTGCTGCAGATCTTAAGTTATCTGGATGATCGATGCAGAGTCC
ACAAGGACACAATCAATCTCTGTAAGAGTATACTACAGCGCAAGCCCCTTGACTGGATCTCAGTGCAGCGAAATCATTTG
ACAAATCCAATACGTGATGTGGATCTTGTTATTACCGTTGGTGGTGATGGCACACTTTTACGGGCTAGCCATTTTTTGGA
TAGCTCGATTCCCATTTTAGGTGTTAATTCGGATCCTACTTGTTCTGATGAGGTTAGTTCTTTCCATGATTGACAATAAT
CATCTATTGAAACCAATCACATTAGCAATGCTTGTTGACTA-CATTTGCATATGTTCTTCTTTGCACGCTTCTAAGCAGA
CTAATGGTCATACATGTGCTTGATGTGTATGTGTATGGTTTTATAACTCCATGCAGGTTGATGAGTTAACTGAGGAATTT
GATGCAAGAAGAAGCACCGGATATCTTTGTGCAGCTACTGCCTGGAACTTCGAGCAGGTATGTCGCTGTTGCCTAGTCTT
CTTGCTTGGGGATCTCAATTCATTTTCTTACAGAAATCACACCACTCTGCTTTCTGTTATAGCGTCGGAACATTTACTGA
ATTTCTTGAATGTTACTGTTCTCTTGAACATGACATATTCTCAGATACTTGACGCAACCCTTGCTGGCAGTAGACACTAT
TCAGAGCTGTCAAGAATATCAGTGAAACTAAATGGATCCCAGCTACCGACTTATGCTCTGAATGATATATTGGTGTCACA
CCCCTGTCCGGCAAGTGTGTCGCGCTTCTCATTAAGGTACTGACTTTGAGCCTTTCTGTAAATATTGATGAC-TTCTGTG
ATCAATTCTAACTGGCATTACCATTTCAGAAAAAGAAGCAATGGGGAGACCTCACGTTTGATTAATTCTAGATCAAGTGG
TCTCAGGGTCGCAACAGCTACTGGATCAACTGCTGCCATGCTATCAGCAGGAGGATTTATGATGCCAATATCAAGTCGTG
AGCTTCAGTATATGATAAGGGAGCCCATTTCACCAACGGATGCCGACAAACCACTGCTGCATGGATTAGTTAAGCAAGAG
CAACATATGCTTGTTGTTTGGTACAATCAAGAGGGTGCTGTGTATATTGATGGTTCTCATGTAACATATCCAATCCAGCA
TGGGGATACACTTGAGATCTCCTCAGATGCTCCAGTCTTAAAAGTTATTTTACCAGAATATCTGTTAAAGCAGGCATCTT
TATAATGAAATAACGGTATCACTGTTCTGATGCTTGACTGCTTATTGATCTGGCATGATCTTTGAGGCAAGTGGAGTTCT
TGAGTACTTTAAACTACTACCTCTGTTCATTAATATAAGACGTTTTGGCAGTTCAAATTAAACTGCCAAAAGGTCTTATA
CTAATGAACAGAGGGTGTAATATATAAACATATCGTTATATACAATAGACTTAATTTGCGATATCAAACGAAATAGTAGA
TGGTGATTTTGTAGTTTACCCTTTTTG------AAGCAAAAGCAACATTAGACCGTCCGAGTTTAGATTAGAGATAGTGT
TTTGTCAGAATCTTAATAATCTTATCCTTCCAGCAGTTCTGAAGCAGAGAGTACTTTGCATTCTTAGTAGAATTAGGCAT
TTTTATGTTAGTAGCTACATTTTACTGCCAGAATAGACATAGTGGCCTAGCCCTAGTGGTTCTTACAGGTGTACAGATCT
GAAATACATCTAACATTTAAGTCGCAAAATGTCTCAAGCTACCATCAACATCTAAAGATGACGAGTCACTGGTGTTGTTA
CATGATACTTGTGCCGTTATGCTCTGGCTCTCACTTGGATTTTCCCAGAAGTTTCTGCGTAGACCACTTGAGCTCAGGCT
GTTTGCAGCAAGGCTGAGTTCTGATAGGAAGGGTTGCAGGGGGGTATGGCCCTCGAGCAGGCTCACCGCGTTGGACATCT
TTGGTCTAAGTGTCGGTGCTGCGTTGGTGCATAAGAGAGCCACATTCAGCATGAGGAGTGCCTCTTCTGTTGAGTAATTG
GATCCTAAGTCTGGATCTACCAGCTCCAGGAGAGTTCCTCTCTCATGTAAAACACAAGCCTGGAACACATTTAAGAGACG
CAATTAGCCTCTTCCTTACAGCGTTCAAGGTATGTATGCGAGAATAAAGCATGAACTGTCAGAGTTTAGCATTTTGTTTC
ACTACAGCGCACCCCCC-TACATGAAAATTATACAGTTTCCTTCAACTATTT
>chr5B_1177
AGTCGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CGAGCGTCCGGACGGAAGC
CTTCCGGAGGGAGCCGAGCCACCAGCGAGGTGGCCGTGTCCTCTCCCCAGTTCCAATGGCGCGCCGCCGCGTGCTCCTCT
ACCTCAAGCCCTTCGATGTCTACCCTCCGCGCCCTCTCTCCGGCGCCTCCTCCCTCACCTTCCCGCCACCGCCTCCGCCG
CCGCGCGCCGCCAACCCCAAGGTCCGCACCTCTCTCGCTCACCCTCTCCGTTTCGAGAAACCTTGGTTACGCCGGCGTTC
ACGGTTGTCGATGCGCCGGAGGGGGTTTCCGGTGGACTCCCAAGTTCCCGTGCTCCGGCGAGCCGTTGGGATAAAATGGT
GGTGGAGTGGAGTTCACCTCGTCGTTCAGAAATCGTGAACTTGAGCTGGTTAACCAATGGTTTCTAAAGGACCGTGCTTG
CGCTGATCCATTGTTATCTGTGCGCGTCTTTGGCGTCTGGCTGTATGATTTTTCATCTCCATTTTTGTTACAATACATGT
CGTTTGAACTTCCCATGGGCTGGCACTGAGCACACCAGCTGTTTGTTGAAATACTTGTGTGGAGTATGAGCTCTGGTCAG
TGATTAGGACTCGAGGTGCAGTGTTCTATGAACTGGTGGGTGCCAGAAATCCTTTCTAGGTCACAATGTGGACTTCCAGT
TGGATTTCAGCCTGAATTACTGTCTGTTATTGAGAAATCTGCCATCTTGCTTGTCAGATCAACAT---------CTACTG
GGAGAAGTTGCATAACTAGCTGAATCTAACAAGCTTCATTTCCCACTTTCTTGCTGCATAACCATTTTTACCGACATGAA
TTAAGGGTTTCATGCCTCTTATCGTCAATTTAATGTCTTGTTGCAGATCTTAAGTTATCTGGACCATAGATGCAGAGTCC
ACAAGGACACAATCAATCTCTGTAAGAGTGTACTACAGCGCAAGCCCCTTGACTGGATCTCAGTGCAGCGAAATCATTTG
TCAAATCCAATACATGATGTGGATCTTGTGATTACTGTCGGTGGTGATGGCACACTTTTACGGGCTAGCCATTTTTTGGA
TAGCTCGATTCCCATTTTAGGTGTTAATTCGGATCCTACGTGTTCTGATGAGGTTAGTTCTTTGGACGTTTGCCAATAAT
CATCTATTGAAACCAATCACATTAGCAATGCTTGTTGACTATCATTTGCATATGTTCTTCTTTGCACGCTTCTAAGCAGA
CTAATGGTTATACATATGCTTGATGGGTATGTTTATGGTTTTATAACGCCATGCAGGTTGAAGAGTTAACCGAGGAATTT
GATGCGAGAAGAAGCACCGGATATCTTTGTGCAGCTACTGCCAGGAACTTTGAGCAGGTATGTTTCTGTCGCCTAGTCTT
CTTGCTTGAGGGTCTCAATTCGTTTTCTTACAGAAATCACACTAGTCTGCTT----TTATACAGTCGGAACATTTACCAA
ATTTCTTGAATGTTACCGTTCTCTTGAACATGACATATTCTCAGATACTTGATGCAACCCTTGCTGGCAGTAGACACTAT
TCAGAGCTGTCAAGAATATCTGTGAAACTAAATGGATCCCAGCTACCAACTTATGCTCTGAATGATATATTGGTGTCACA
CCCCTGTCCGGCAAGTGTATCGCGGTTCTCATTAAGGTACTGACTTTGAGCCTTTCTGTAAATATTGATGATTTTCTGTG
ATCAATTCTAACTGGTATTACCATTTTAGAAAAAGAAGCAATGGGGAGACCTCATGTTTGATTAATTCTAGATCAAGCGG
TCTCAGGGTTGCAACAGCTACTGGATCAACTGCTGCCATGCTATCAGCAGGAGGATTTATGATGCCAATATCAAGTCGTG
AGCTTCAGTATATGATAAGGGAGCCCATTTCACCAACGGATGCCGACAAACCACTGCTGCATGGGTTAGTTAAGCAAGAG
CAACATATGCTTGTTGTTTGGTACAATCAAGAGGGTGCTGTGTATATTGATGGTTCTCATGTAACATATCCAATCCAGCA
TGGGGATACACTTGAGATCTCCTCAGATGCTCCAGTCTTAAAAGTTATTTTACCAGAATATCTGTTAAAGCAGGCATCTT
TATAATGAAATAACGGTATCACTGTTG---TGCTTGACTGCTTATTGATCTGGCATGATGTTTGAGGCAAGCGGAATTCT
TGAGTACATTAAACTACTACCTCTGTTCATTAATAT----------------------TAAACTGCCAAAACGTCTTATA
TTAATGAACAGAGGGTGTAATATATAAACATATCGTTATATACAATAGAGTTAATTTGCGATATCAAACGAAATAGTAGA
TGGTGATTTTGTAGTTTACCCTTTTTGAAGCAAAAGCAAAAGCAACATTAGACCGTCAGAGTTTAGATTAGAGATAGTGT
TTTGTCAGAATCTTAATAATCTTATCCTTTCAGCAGTTCTGAAGCAGAGAGTGCTTTGCATTCTTAGTAGAATTAGGCGT
TTTTATGTTAGTAGCTACATTGTACTGCCAGAATAGACATAGTGGCCTAGCCCTAGTGGTTCTTGCAGGTGTACAGATCT
GAAATACATCTAACATTTAAGTCGCAAAATGTCTCAAGCTACCATCAACATCTAAAGATGACGAGTCACTGGTGTTGTTA
CATGATGCTTGTGCCGTTATGCTCTGGCTCTCATTTGGATTTTCCCAGAAATTTCTGCGTAGACCACTTGAGCTCAGGCT
GTTTGCAGCAAGGCTGAGTTCTGATAGGAAGGGTTGCAGGGGGGTATGGCCCTCGAGCAGGCTCACAGCATTGGACATCT
TTGGTCTAAGTGTAGGTGCTGCGTTGGTGCATAAGAGAGCCACATTCAGCATGAGGAGTGCCTCTTCTGTTGAGTAATTG
GATCCTAAGTCTGGATCTACCAGCTCCAGGAGAGTTCCTCTCTCATGTAAAACACAAGCCTGGAACACATTTAAGAGATG
CAATTAGCCTCTTCCTTCAAGCGTTCAAGGTATGTATGCGAGAATAAAGCATGAACTGTCAGAGTTTAGCATTTTGTTTC
ACTACAGCGCACCCCCCCTACATGAAAATGATACAGTTTCCTTTAACTATT-
>chr5D_1179
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------TGCCGAGCGTCCGGACGGAAAC
CTTCCGGAGGGAGCCGAGCCACCAGCGAGGTGGCCGTGTCCTCTCCC-AGTTCCAATGGCGCGCCGCCGCGTGCTCCTCT
ACCTCAAGCCCTTCGATGTTTACCCTCCGCGCCCTCTCTCCGGCGCCTCCTCCCTTACCTTCCCGCCACCACCTCCGCCG
CCGCGCGCCGCCAACCCCAAGGTTCGCACATCTCTCGCTCACCCTCTCCGTTTCGAGAAACCCTGGTTACGCCGGCGCTC
ACGGTTGTCGATGCTTCGGTGGGGGTTTCCGGTGGACTCCCAAGTTCCCGTGCTCCGGCGGCCCGTTAGGATAAAATGGT
GGTGGAGTGGAGTTCACCTTGGTGTTCAGAAATCGTGAAC-TGCGCTGGTGAACTGATGGTTTTTCAAGGACCGTGCTTG
CGCTGATTCATTGTTACCTGTGCGCGTCTTTGGCGTCCGGCTGTATGATTTTCCATCTCCATTTTAGTTACAATACATGT
GGTTTGATCTTTCCATGTGCTGGCACGGAGCACACCAGCTGTTTGTTGAAATACATGTGTGGAGTATGAGCTCTGGCCAG
TGACTAGGACTCTAGGCGCAGTGTTGTATGAACTGGTCGGTACCAGGAGTCCTTGCTAGGCCACAATGTGGACTTCCAGT
TGGATCTCAGCCTGAATTACTGTCCGTTATTGAGAAATCTGCCATCTTGCTTGTCAAATCAGCATCTGTTAGTACTACTG
GGAAAAGTTGCATAACTAGCTGAATCTAACACGTTTCATTTCCCACTTTCTTGCTGCATAACCATTTTGACTGACATGAA
TTAAGGGTTTCGTGCCTCTTATCGTCAATTGAATGTCTTGTTGCAGATCTTAAGTTATCTGGACGATCGATGCAGAGTCC
ACAAGGACACAATCAATCTCTGTAAGAGTGTACTACAGCGCAAGCCCCTTGACTGGATCTCAGTGCAGCGAAATCATTTG
ACAAATCCAATACGTGATGTGGATCTTGTGATTACCGTCGGTGGCGATGGCACACTTTTACGGGCTAGCCATTTTTTGGA
TAGCTCGATTCCCATTTTAGGTGTTAATTCGGATCCTACTTGTTCTGATGAGGTTAGTTCTTTGCATGATTGACAATAAT
CATCTATTGAAACCAATCACATTAGCAATGCTTGTTGACTA-CATTTGCATATGTTCTTCTTTGCACGCTTCTAAGCAGA
CTAATGGTTATACATGTGCTTGATGTGTATGTGTATGGTTTTATAACTCCATGCAGGTTGATGAGTTAACTGAGGAATTT
GATGCAAGAAGAAGCACCGGATATCTTTGTGCAGCTACTGCCCGGAACTTCGAGCAGGTATGTCGCTGTTGCCTAGTCTT
CTTGCTTGGGGATCTCAATTCATTTTCTTACAGAAATCACACTACCCCGCTTTCTGTTATAGCGTCGGAACATTTACCGA
ATTTCTTGAATGTTACTGTTCTCTTGAACATGACATATTCTCAGATACTTGACGCAACCCTTGCTGGCAGTAGACACTAT
TCAGAGCTGTCAAGAATATCAGTGAAACTAAATGGATCCCAGCTACCGACTTATGCTCTGAATGATATATTGGTGTCACA
CCCCTGTCCGGCAAGTGTATCACGCTTCTCATTAAGGTACTGACTTTGAGCCTTTCTGTAAATATTGACGATTTTCTGTG
ATCAATTCTAACTGGCATTACCATTTCAGAAAAAGAAGCAATGGGGAGACCTCACGTTTGATTAATTCTAGATCAAGTGG
TCTCAGGGTTGCAACAGCTACTGGATCAACTGCTGCCATGCTATCAGCAGGAGGATTTATGATGCCAATATCAAGTCGTG
AGCTTCAGTATATGATAAGGGAGCCCATTTCACCAACGGATGCCGACAAACCACTGCTGCATGGATTAGTTAAGCAAGAG
CAACATATGCTTGTTGTTTGGTACAATCAAGAGGGTGCTGTGTATATTGATGGTTCTCATGTAACATATCCAATCCAGCA
TGGGGATACACTTGAGGTCTCCTCAGATGCTCCAGTCTTAAAAGTTATTTTACCAGAATATCTGTTAAAGCAGGCATCTT
TATAATGAAATAACGTTATCACTGTTCTGATGCTTGACTGCTTATTGATCTGGCATGATGTTTGAGGCAAGTGGAGTTCT
TGAGTACTTTAAACTACTACCTCTGTTCATTAATATAAGACGTTTTGGCAGTTCAAATTAAACTGCCAAAACGTCTTATA
TTAATGAACAGAGGGTGTAATATATAAACATATCGTTATATACAATAGACTTAATTTGCGATATCAAACGAAATAGTAGA
TGGTGATTTTGTAGTTTACCCTTTTTG------AAGCAAAAGCAACATTAGACCGTCAGAGTTTAGATTATAGATAGTGT
TTTGTCAGAATCTTAATAATCTTATCCTTTCAGCAGTTCTGAAGCAGAGAGTACTTTGCATTCTTAGTAGAATTAAGCGT
TTTTATGTTAGTAGCTACATTTTACTGCCACAATAGACATAGTGGCCTAGCCCTAGTGGTTCTTACAGGTGTACAGATCT
GAAATACATCTAACATTTAAGTCGCAAAATGTCTCAAGCTACCATCAACATCTAAAGATGACAAGTCACTGGTGTTGTTA
CATGATGCTTGTGCCGTTATGCTCTGGCTCTCACTTGGATTTTCCCAGAAGTTTCTGCGTAGACCACTTGAGCTCAGGCT
GTTTGCAGCAAGGCTGAGTTCTGATAGGAAGGGTTGCAGGGGGGTATGGCCCTCGAGCAGGCTCACCGCGTTGGACATCT
TTGGTCTAAGTGTCGGTGCTGCGTTGGTGCATAAGAGAGCCACATTCAGCATGAGGAGTGCCTCTTCTGTTGAGTAATTG
GATCCTAAGTCTGGATCTACCAGCTCCAGGAGAGTTCCTCTCTCATGTAAAACACAAGCCTGGA----ATTTAAGAGATG
CAATTAGCCTCTTCCTTACAGCGTTCAAGGTATGTATGCGAGAATAAAGCATGAACTGTCAGAGTTTAGCATTTTGTTTC
ACTACAGCGCACCCCC--TACATGAAAATTATACAGTTTCCTTCTACTATT-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-------------------------------S------S----------S------------------------------
-S---------------S---------S--S--S-----------------------------------------SS---
-------------------S---------------------------------------S--------------------
---------------S------S---------------------S--S--------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------------------------------S------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S----------------------S----------------
-----------------------------S--------------------------------------------------
-----------------------------S--------S-----------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------------S----------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------------------------------------------S--------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------------------------------------S--------
S-------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-----------------------------S------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------------------------------------------------S
>forward_170
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCCTTGCATA
GCTCGTCGAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>reverse_1148
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGCGGTGAAGTTGGCCTTAT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>forward_1049
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AAGGTCGTTTG
GTGCGTTTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_2199
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------TGGTGGTGATGGCACACTTT----------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>forward_1167
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGCGGTGAAGTTGGCCTTAT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>reverse_2970
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGCAACAGCTACTGGATCAAC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_1458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
ATGGTTGTCGATGCGTCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_3340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CTTTGAGGCAAGTGGAGTTCT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
