>input_sequence_35052
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---------------------------------------------------------------ATGGCCTCCGCCTCTGT
TTCCCTCTCCTCCCTCGCTTCCTCCGCCGCCGCCGCCGCCGCGATCTCCTCCTCCCCCGGCTGCCCTCCTTCCAAACCCT
TTCACGATCCAAAACCTCTTCACCTTTCCGTCAGACTATTCCCCCGTTTCGCCAAACCTCAATCGCTCTCCTGCTCTGGG
CCGCACGCCCCTCGCGCCGCCACCGGCGACGGATCGGGTGCCGGGAACCGTGGGGATGACTCGGGAGGAAACGGCGGAAA
AGATGGAGGTGGCAACGATGGCGACGGCGGCGGCGAAGACGACTACGAGGAGGCCGAGTTCGGGCCGCTGCTCGGCTTCA
GCGAGGTGGCGCGCCTCGCGGCCGCCCGCGGCGTCACGCTCCCGGCCGACATGATTGAAGCGGCCAAGGACGCCGGCATC
CGGGAAGTGATTTTGCTCCGATACTTCGATTTGCAGGTATACCGAATTGCACACTTCTTTTCCTGAGGCGTAAATCCGGC
CGTTTCCTCACCTCTTTCCATCCCCGCAGGCCGCACCGTGGCCACTCGCCGCGATGATCCGGGCCTTGTCAGTGCTCCGC
AACAGAATGCTCGCCGATCCGTCATTTCTCTTCAAAGTTGGCATCGAGGTATGCGCGATTCATCGTTGACTATTTTTGTA
TCAGAACTCAGAGCTGGTGTTTTTATATTTCAGTCCTATGCTATTTTGAAGTTGAGGTTC------GAATGCAGGTTGTG
ATCGACTCCTGCTGTGCAACGCTTGCGGAGGTGCAGAAGAGGGGGGAGGATTTTTGGGCAGAGTTTGAGTTATATGCTGC
TGACATTTTGATCGGGATTGTTGTTGATATCGCCCTAGTTGGGATGTTGGCTCCGTACGTGAGATTGGGAAAGGCGTCTG
CTTCAACTGGGCTGTTAGGGAGGTTCAACCGGATGGCTGGAGCTTTGCCAAGCAGGTGAAATCATATTTTTCACTATAAG
TTGCCACTGCAGTGGATAGATAATATGAGAAGTAAAATAAGGTGCCCAGTTTGTAGTTTCATTTGTCATGACCATCAGAT
TCTATCCAAGAAATGGAATGAGATAGTGTGGATGGATTCTGTAGTATTCTTCTCAATTCAATTTTTTTTCCAGTCCGACA
TGCTGATTTTATGGCCTCTTACCTGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAGATTTACAGTCCAACAAAGAATT
GGGACATACTTTTATAAGGTAATGAATGAATCTTACATCAAAAGTATTCACTCTGAATGTAGCATCATTATCTGATATTC
TGTTTTGAATTGGTGGAGCACCATTACGTTGTTTGAATCGGGTTGTTTTAAATTTTATCCCAGGGTGTTTTGTATGGCTC
AGTTGGATTTGTCTGTGGTATTATCGGGCAGGGAATTTGCAATATGATAATGAATGCCAAGAGGTAATGCTTGTGCCTTT
CGTGCTTTTGATACATAATCATTTTTTCTCCCATTATACTATCCTTTTGTAAGGTCTTTCTGCAGGATTTCTTTGTTGTT
TGTTCACCACCTCAGTATTGCCAATGAATATTATTCTCAAATTATGTTTCTCTTATCT----------------------
----------------TGACTTGTGTGATTTTGCTTGGTTCTGTTCATTTTTCAGGAGTGTCAAAAAAACAGATGAAGAT
ATTCCTGTTCCACCACTTATTAAAAGTGCTGCTCTTTGGGGTATGTATATTGTGTATTTTTTTTTCATTTTACCACTTAT
TTTACTTTGACCACATGTTCAGTAACTGCAAATGTGGGTTTGATGTCCACTAAAGAGATATCTAACAGCTGAGACAGATA
GACATATGATATGAGCAT--------------------------------------------------------------
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----------------------------ATACTTTAATGTTTAACGTCAGTTTCGCTTAGTTTCACTAAAATTTCTTGAA
CATTTCTCTAACTATGTTAATTCAGACATTCTCCGACAGTTAATTTATAAATTGATTTCTTTACTTTCTACTCCTGATTT
ATGTCATTTCTTACTATTTATGTCATT-TTTTCTGCAGCGGGCTTCCTGATTTATGCCCCAAACTAGTAGTAGCACATCC
CATTTCTATGTTCCATTCCTCAACTGACAAGCACTGTTAACATGTAGGCGTGTTCCTTGCTGTATCATCTAATACACGCT
ATCAGATCATCAATGGTCTGGAACGAGTAGTTGAGGCATCACCAGTTGCAAAGGGTGCCCCTCCTGTTGCACTGGCTTTC
ACCGTTGGTGTCCGCTTTGCCAATAACATCTATGGTGGTATGCAGTTTATCGACTGGGCTCGATGGAGTGGTGTCCAGTA
A-------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr2D_1_TraesCS2D01G374200
TCGGACGTAATGCATATATATTGATCTTGCCATGAAGAATCATCATAACTACACGCTATTCTATCAATTTGCCCAACAAT
AATTTGTTTACCCATCATACTATAATTATGAGAGATGCCACTAGTGAATCTATAATCCTCGGGTCCATTCACTTCATACT
TACTAAAACCCTAAAAT-ATTTCCTCATTGTTTTTATTTACTTTTATCTTTATTTCATTTTACATATTTCCCATTATCAG
ATTTAATCTTTGTAATCAAGGTTGTCAGAATCACGATTCTATTATACGATTGTATGACTTTACGATCCAAACTAACTCCT
TTGATTCTACGATTTTAGTTCTTAGAATCTACATTTCTACGGTCGTGATAGTGAAGATTCCACGATTTGCGATCCTACCA
TCGAAGCTCCGATCTGATTCAAAATGGCGATTCTGACAACCTTGCTTGTAATTGGCGAGAACGAAGGGATCGACAACCCC
TTTGCTGTCGTTGGGTGCAAGCGTTGGTTTGTGCATGTGTGCATGTACCGTTTTATCTTGTCTGAGTGACGTCTTCTATT
GGTTCGATAAACTTTGATTCTTTACTTAAGGAAATACTTTTCGCTACTACACTGCTTCGTCCTTACTCTTCAGGAAATCC
CAACACCTATCATAAATAGCAATGGGCAACTAGTTTCGAAGATCAGGTCTTGATGTGTGGTAGGGAGTTTTATTTCGGTG
AAGATATGAAGGGAACAAAGCAAAGTGGTAGATCTACTGGCAAACTACAGCAGCCACAGAGAGGGTACTATTGCGGTGTG
GCTTAACCATAGTCC--------TCATGTATTGAGGAACTTGTGCTTCTCGATTGTAACTCATTAAACTTTAAATAAACT
CCATTTTTTCTGGAAAAAAGAACAATTCTTTGTACTCGAATTTA-------------ACCGAATTTAGCACTTCTGACCA
ATTCCTTAAACCTGAACAAAGA-GGAAAAATACTTTAAACCCTTAAGCCCCCAATTCGTCGTCATGGCCTCCGCCTCTGT
TTCCCTCTCCTCCCTCGCTTCCTCCGCCGCCGCCGCCGCCGCGATCTCCTCCTCCCCCGGCTGCCCTCCTTCCAAACCCT
TTCACGATCCAAAACCTCTTCACCTTTCCGTCAGACTATTCCCCCGTTTCGCCAAACCTCAATCGCTCTCCTGCTCTGGG
CCGCACGCCCCTCGCGCCGCCACCGGCGACGGATCGGGTGCCGGGAACCGTGGGGATGACTCGGGAGGAAACGGCGGAAA
AGATGGAGGTGGCAACGATGGCGACGGCGGCGGCGAAGACGACTACGAGGAGGCCGAGTTCGGGCCGCTGCTCGGCTTCA
GCGAGGTGGCGCGCCTCGCGGCCGCCCGCGGCGTCACGCTCCCGGCCGACATGATTGAAGCGGCCAAGGACGCCGGCATC
CGGGAAGTGATTTTGCTCCGATACTTCGATTTGCAGGTATACCGAATTGCACACTTCTTTTCCTGAGGCGTAAATCCGGC
CGTTTCCTCACCTCTTTCCATCCCCGCAGGCCGCACCGTGGCCACTCGCCGCGATGATCCGGGCCTTGTCAGTGCTCCGC
AACAGAATGCTCGCCGATCCGTCATTTCTCTTCAAAGTTGGCATCGAGGTATGCGCGATTCATCGTTGACTATTTTTGTA
TCAGAACTCAGAGCTGGTGTTTTTATATTTCAGTCCTATGCTATTTTGAAGTTGAGGTTC------GAATGCAGGTTGTG
ATCGACTCCTGCTGTGCAACGCTTGCGGAGGTGCAGAAGAGGGGGGAGGATTTTTGGGCAGAGTTTGAGTTATATGCTGC
TGACATTTTGATCGGGATTGTTGTTGATATCGCCCTAGTTGGGATGTTGGCTCCGTACGTGAGATTGGGAAAGGCGTCTG
CTTCAACTGGGCTGTTAGGGAGGTTCAACCGGATGGCTGGAGCTTTGCCAAGCAGGTGAAATCATATTTTTCACTATAAG
TTGCCACTGCAGTGGATAGATAATATGAGAAGTAAAATAAGGTGCCCAGTTTGTAGTTTCATTTGTCATGACCATCAGAT
TCTATCCAAGAAATGGAATGAGATAGTGTGGATGGATTCTGTAGTATTCTTCTCAATTCAATTTTTTTTCCAGTCCGACA
TGCTGATTTTATGGCCTCTTACCTGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAGATTTACAGTCCAACAAAGAATT
GGGACATACTTTTATAAGGTAATGAATGAATCTTACATCAAAAGTATTCACTCTGAATGTAGCATCATTATCTGATATTC
TGTTTTGAATTGGTGGAGCACCATTACGTTGTTTGAATCGGGTTGTTTTAAATTTTATCCCAGGGTGTTTTGTATGGCTC
AGTTGGATTTGTCTGTGGTATTATCGGGCAGGGAATTTGCAATATGATAATGAATGCCAAGAGGTAATGCTTGTGCCTTT
CGTGCTTTTGATACATAATCATTTTTTCTCCCATTATACTATCCTTTTGTAAGGTCTTTCTGCAGGATTTCTTTGTTGTT
TGTTCACCACCTCAGTATTGCCAATGAATATTATTCTCAAATTATGTTTCTCTTATCT----------------------
----------------TGACTTGTGTGATTTTGCTTGGTTCTGTTCATTTTTCAGGAGTGTCAAAAAAACAGATGAAGAT
ATTCCTGTTCCACCACTTATTAAAAGTGCTGCTCTTTGGGGTATGTATATTGTGTATTTTTTTTTCATTTTACCACTTAT
TTTACTTTGACCACATGTTCAGTAACTGCAAATGTGGGTTTGATGTCCACTAAAGAGATATCTAACAGCTGAGACAGATA
GACATATGATATGAGCAT--------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------ATACTTTAATGTTTAACGTCAGTTTCGCTTAGTTTCACTAAAATTTCTTGAA
CATTTCTCTAACTATGTTAATTCAGACATTCTCCGACAGTTAATTTATAAATTGATTTCTTTACTTTCTACTCCTGATTT
ATGTCATTTCTTACTATTTATGTCATT-TTTTCTGCAGCGGGCTTCCTGATTTATGCCCCAAACTAGTAGTAGCACATCC
CATTTCTATGTTCCATTCCTCAACTGACAAGCACTGTTAACATGTAGGCGTGTTCCTTGCTGTATCATCTAATACACGCT
ATCAGATCATCAATGGTCTGGAACGAGTAGTTGAGGCATCACCAGTTGCAAAGGGTGCCCCTCCTGTTGCACTGGCTTTC
ACCGTTGGTGTCCGCTTTGCCAATAACATCTATGGTGGTATGCAGTTTATCGACTGGGCTCGATGGAGTGGTGTCCAGTA
ATGGTGAGTGATCCTGTTTTAGTTGTGCATCTTGTCATCTTCTCACCAATAGTATGTCATGGAAAATCAATTTTATACAC
CTATTCGTTGAA-CAGAAAATGCTTCCAGGTGATGTCCTACCATTATCTTGCATCATTTGGAAGGATGTCAAATCATTCC
ATTTCTTTAAATGATTCTC-GCAGACCCTAAGAAAACATTGAATTTTGTGGTATTCTTCAGGGGGGAATTCAAGCAAGAG
ATCCATACAAGCTTCGTTGGCGA-TTTTC-ACCTTTGCTAGAGGCAATCA--CAGCCCTGTGGTGACATTCGATCACTCG
G------AGAAGAGCGAAGAAGCAGATGGTATTGCAACCTTG-----TTGTCAGACATGAGCTGTGAACAGTATCTTTTC
AATTATTTCATTCCTGTACCAAGTCAAACACTAGTGTAACGTGTCTAGCGCGTCGTTTAGTTTAATCACATGAGTAATGT
GATGTGAGTTGACTATCCAAAATAATGGTGTGGGAAGTAGGAAGGGTACCTGATATATTGG------AAAAAACTGAAAA
AAAAATATTGTTGGCATTTATTTTGTGGGAAGGAGGGTCCAAATTGTCGGCTGACTTAATAAACGGTTAGACCTCGCTGG
CACACTGGATAATGACGGAAGCACATCTGCTGAAACTGCTGAAAATGACGTGACTGAATCATCATACGACTAGTAATCCA
ATGAAGTAGTCCTAGCATGACAAATCACAAGTGAAGGCGTGTTGCAACTTGCCTAGACCATCCAATCTGAAGTTCTGAAC
ACGCAGTGGGCATATACTCGTACGTCTCGTGTGCTAACAACTCAGGCCGAAACAGAGGCGTGGCATGTACTCCCTTCGTC
CCGAAAAACATGTCGCGCCTGTAGTTCATTGCTAATTTTGCAAAAAAGCCCTCGTAGTTTCAAAACTGTCGCAAACAAGT
CCCTCCACCCTGTCTTCTTCCTCCGCCGTCGCCCGTGCGTCGCCAGCGGCTGTCGCCGCCAAGC
>chr2A_1
TCGGACGTAAAGGCTATATATTGATCATGCCATGAAGAACCATCATAACTGTGCGCTATTCTATCAATTGCTCAATAG-T
AATTTATTTACCTACCGTACTATGCTTACGAGAGAGATG-------------------TCGGGTCAATTCACTTCATACT
TACTAAAACCCTAAAAACATTTCCTCGTTGTTTTTATTTTAT----------TTTTATTTTATACATTTATCACTATAAG
ATTTAATC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CTTGTAATTGGCGAGAACGAAGGAATTGACGAACCC
TTTGTTGTCGTTGGGTGCAAAGGTTGGTTTGTGTGTGTGTGCACGTATCGTTTATTTTATATGG-GTGACGTCTTCTATT
GGTTCGATAAACATTGGTTCTTTACTCATGAAAATACTTTTAGCTACTACACTGCTTTGTC---ACTCTTCAGGAAATCC
CAATGTCTATCATAAATAGCAATGGCCAGCTAGTTTCAG-----AGGTCTTGATGTGTGATAGGGAA-TTTATTTTGCTG
AAGATACGAAAGGAACAAGACAAATTGATAGATTTACTGGTAAATTAC-----------AGAGTATACTATTACGGTGTG
GCTTAACCGTAGTCC--------T-------TGAGAAAATTGTGCGTCTTGATTGTAACTCTTTAAACTTCGAATAAACT
CCATTTTTCCTGCAAAAAAAGACAACCTTTTGTACTCGAATTTA-------------ACTGAATTTAGCACTTCTGACCA
ATTCCTTAAACCTGAACAAAGA-GGGAAAATAACTTAAAACCCTTAGCCCCCAATTCATCGTCATGGCCTCCGCCTCTGT
TTCCCTCTCCTCCCTCGCTTCCTCCGCCGCCGCCGCCGCCGCGATCTCCTCCTCCCCCGGCTGTCCTCCTTCCAAACCCT
TTCACGATCCAAAACCTCTTCACCTTTCCGTCAGACTATTCCCCCGTTTCGCCAAACCTCAGCCGCTCTCCTGCTCTGGG
CCGCACGCCCCTCACGCCGCCACCGGCGACGGATCGGGTGCCGGGAACCGTGGGGACGACTCGGGAGGAAACGGAGGAAA
AGATGGAGGTGGAAACGATGGCGA---CGGCGGCGACGACGACTACGAGGAGGCCGAGTTCGGGCCGCTGCTCGGCTTCA
GCGAGGTGGCGCGCCTCGCGGCCGCCCGCGGCGTCAAGCTCCCGGCCGACATGATTGAAGCGGCCAGGGACGCCGGCATC
CGGGAAGTGATTTTGCTCCGATACTTCGATTTGCAGGTATACCGAATTGCACACTTCTATTCCTGAGGCATAAATCCGGC
GGTTTCCTCACCTCTTTCCATCTCCGCAGGCCGCACCGTGGCCACTCGCCGCGATGATCCGGGCCTTCTCAGTGCTCCGC
AACAGAATGCTCGCCGATCCGTCGTTTCTCTTCAAAGTTGGCATCGAGGTATGTGCGATTCATCGTTGACTATTTTTGTA
TCAGAACTCAGAACTGATGTTTTTATATTTCAGACCTATGCTATTTTGAAGTTGGGGTTTCGGACTGAATGCAGGTTGTG
ATCGACTCCTGCTGTGCAACACTTGCGGAGGTGCAGAAGAGGGGGGAGGATTTTTGGGCAGAGTTTGAGTTATATGCTGC
TGACATTTTGATCGGGATTGTTGTTGATATCGCCCTAGTTGGGATGTTGGCTCCATATGTTAGATTGGGAAAGGCGTCTT
CGTCAACGGGGCTGTTGGGGAGGTTCAACCGAATGGCTGGAGCTTTGCCAAGCAGGTGAAATCATATTT--GACTA--AG
TTCCCACCACAGTGGATAGATAATATGAGAAGTAAAATAAGGTGCCCAGTTTGTAGTTTCATTTGTCATGACCATCAGAT
TCTATCCAAGAAATGGAACGAGATAGTGTGGATGGATTCTGT-GTATTCTTCTCAATACAATTTTTTTCCCAGTCCGACA
TGCTTATTTTATGGCCTCTTACCTGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAGATTTACAGTCCAACAAAGAATT
GGGACGTACTTCTATAAGGTAATGAATGAATCTTACATCAAAAGTATTCACTCTGAATGTAGCATCATTATCCAATATTC
TGTTTTGAATTGCTGGAGCACCATTACGTTGTTTGAATCGGGTTGTTTT------TATCCTAGGGTGTTTTGTATGGCTC
AGTTGGATTTGTCTGTGGTATTATCGGTCAGGGAATTTGCAATATGATAATGAATGCCAAGAGGTAATGCATGTGCCTTT
TGTGCTTTTGATACATAATAATTTTTTCTCCCATTATACTATCCTTTTGTAAGGTCTTTCTGCAGGATTTCTTTGTTGTT
TGTTCACTACCTCAGTATTGCCGATGAATATTATTCTTAAATTATGTTTCTCTTTTCTTTTTTTCTTTTTTTTTGAGGGG
GATGTTTCTCTTTTCTTGACTTGTGTGATTTTGCTTGGTTCTGTTCATTTTTCAGGAGTGTCAAAAAAACAGATGAAGAT
ATTCCTGTTCCACCACTTATTAAAAGTGCTGCTCTTTGGGGTATGTATATTGTGTA-TTTTTTTTCATTTTACTACTTAT
TTTACTTTGACCACATGTTCAGTAATTGCAAATGTGGATTTGATGTCCACTAAAGCGATATCTAACAGCTGAGACAGATA
GACATATGATATGGGAGGCGGATTTATAGCACCCGGGTCCTCCACACCCCTATACGAACATTAAATTCAAAAAAATACCG
AGAAATTTGAAAAAAAATCTGAGTTTTTGGGATATCAAACCTGAGTTCCCGATCCTGGAAACAGCCTCTTACAGAATTGT
AGGAAAAGGCTGCATACAATAGACCCAAAGTTGTCGGACCCTTCTCGGGACCCTGCGCAAGCGGGAGCTACATGCACCAG
GTTGCCTTTTCTTTTTTCTTTTTAAACCTGGGTTCCCGATCTACTCCCGTGTGAAATTTCGTGAAAAAATACTAGGAAAC
ATATTTGTGGCAAAAAAGACT-AAAAATTCCTATGTATAGAAAAAAACTGTTTGGATGGATTTTTTTTCGGCAAGTATTT
CCTTCGCCACGGATATGTTTCCTGGTACTTCTTCACTAAATTTCACACGGGAGTAGATTGAGAACCCAGGTTTGATATCC
CCAAATTTCAGATTTTTTTTTGATTTTTTTGGTATTTTTTACCTTTAATATTCGTATAGGGGTGTGGAGCACCCAGGAGC
TCCTGTGTACTTTCCATATGATATGAGCATACTTTAATGTTTAATGTCAGTTTCGCTTAGTTTCACTAAAATTTCTTGAA
CATTTCTCTAACTATGTTAATTCAGACATTCTCCGACAGTTGATATATAAATTGATTTCTTTACTTGCTACTCCTGATTC
ATGTCATTTCTTATTATTTATGTCATTTTTTTCTGCAGTGGGCTTCCTGATTTATACCCCATACTAGTAGTAGCACATAA
CATTTCTATGTTCCATTCCTGAACTGACAATCAATGTTAACATGTAGGTGTATTCCTTGCTGTATCATCTAATACACGCT
ATCAGATCATCAATGGTCTGGAGCGAGTAGTTGAGGCATCACCAGTTGCAAAGGGTGCCCCTCTTGTTGCATTGGCTTTC
ACCGTTGGTGTTCGCTTTGCCAATAACATCTATGGTGGTATGCAGTTTATCGACTGGGCTCGATGGAGTGGTGTCCAGTA
ATGGTGAGTGATCCTGTTTTAGTTGTTCATCTTGTCATCTTCTCACCAATAGTATGTCATGGAAAATCAGTTTTGTACAC
CTATTCGTTGAA-CATCAAATGCTTCCAGGTGAG---------TTATCTTGCATCATTTGGAAGGATGTCTAATCATTCC
ATTTTTGT-AAATAATTCTTGCGGACCCTAAGAAAACATCAAATTTTGCGGTATTCTTCAGGGAGGAATTCAAGCAAGAG
ATCCATACAAGCTTCGTTGTCAGTTTTTCCACCTTTGCTGAGAGGCAAGCTGCAGCCCTGTGGTGAAATTCGATCACTCT
GGAGAAAAGAAAAGCGAAGAAGCAGATGATATTGCAAGCTTGCAAGGTCGTCAGACATGAGCTATGAACAGTATCTTTTC
AATTATTTCATTTCTGTACCAAGTCAAACACTAGTGTAACGTGTCTAGCGCGTCGTTTAGTTTAATCACATGAGTAATGT
GATGTGACTTGACTACCCAAAATAATGGTGTCGGAAGTAGGAAGGGTGCCTATTATATTGG------GAAAAAACTG---
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----------------------------------------------------------------
>chr2B_779
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-----------------------------------------------------------AGAGTGTACTATTGAGGTGTG
GCTTAATCATAGCCCCCCATTCAT-------TGAAAAATTTGTGCTTTTTGATTGTAACTCTTTAAACTTTGAATAAACT
TCATTTTTCCTGAAAAAACAATATCT-TTTTGTACTCGAATTTAGCATATTTTAAAAACTGAATTTAGCACTTCTGACCA
ATTCCTAAAACTTGAACAAAGAGGAAAAACTAACTTAAAACCCTTAGGCCCCAAATCGCCACCATGGCCTCCGCCTCTGC
TTCCCTCTCCTCCCTCGCTTCCTCCGCCGCCGCCGCCGCCGCGATCTCCTCCTCCCCGGGCTGCCCTCCTTCCAAACCCT
TTCACGATCCAAAACCTCTTCATCTTTCCGTCAGACTATTCTCCCGTTTCGCCAAACCTCAATCGCTCTCCTGCTCCGGG
CCGCATGTCCCCCGCGCCGCCACCGGCGACGGATCGGGTGCTGGGAACCGTGGGGGCGACTCGGGAGGAAACGGCGGAAA
AGATGGAGGTGGAAACGATGGCGACGGCGGCGGCGAAGACGACTACGAGGAGGCCGAGTTCGGGCCGCTGCTCGGCTTCA
GCGAGGTGGTGCGCCTCGCGACCGCCCGCGGCGTCACGCTCCCGGCCGACATGATTGAAGCGGCCAAGGACGCCGGCATC
CGGGAAGTGATTTTGCTCCGATACTTCGATTTGCAGGTATACCGAATGGCGCACTTCTTTTCCTGAGGCCTAAATCCGGC
GGTTTCCTCACCTCTTTCCATCCCCGCAGGCCGCACCATGGCCACTCGCCGCGATGATCCGGGCCTTCTCAGTGCTCCGC
AACAGAATGCTCGCCGATCCGTCATTTCTCTTCAAAGTTGGCATCGAGGTATGTGCGATTCATCGTTGACTATTTTTGTA
TCAGAACTCAGAGCTGGTGTTTTTATATTTCAGTCCTATGCTATTTTGAAGTTGGGGTTC------GAATGCAGGTTGTG
ATCGACTCCTGCTGTGCAACGCTTGCGGAGGTGCAGAAGAGGGGGGAGGATTTTTGGGCAGAGTTTGAGTTATACGCTGC
TGACATTTTGATCGGGATTGTTGTTGATATCGCTCTAGTTGGGATGTTGGCTCCATATGTTAGATTGGGAAAGGCTTCTT
CGTCAACGGGGCTGTTAGGGAGGTTCAACCGGATGGCTGGAGCTTTGCCAAGCAGGTGAAATCGTATTT--CACTATAAG
TTCCCACCACAGTGGATAGATAATATGAGAAGTAAAATAAG--GCCCAGTTTGTAGTTTCATTTGTCATGACCATCAGAT
TCTATCCAAGAAATGGAATGAGATAGTGTGGATGGATTCTGTAGTATTCTTCTCAATACAATTTGTTTTCCAGTCCGACA
TGCTGATTTTATGGCCTCTTACCTGTAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAGATTTACAGTCCAACAAAGAATC
GGGACATACTTTTATAAGGTAATGAATGAATCTTACATCAAAAGTATGCACTCTGAATATAGCATCATTATCTGATATTC
TGTTTTGAATTGCTGGAGCTCCATTACGTTGTTTGAATCGGGTTGTTTT------TATCCCAGGGTGTTTTGTATGGCTC
AGTTGGATTTGTCTGTGGTATTATCGGTCAGGGAATTTGCAATATGATAATGAATGCCAAGAGGTAATGCTTGTGCCTTT
TGTGCTTTTGATACATAATCATTTTTTCTCCCATTATACTATCCTTTTGTAAGGTCTTTCTACAGGATTTCTTTGTTGTT
TGTTCACCACCTCAGTATTGCCAATAAATATTATTCTCAAATTATGTTTCTCTTATCT----------------------
----------------TGACTTGTGTGATTTTGCTTGGTTCTGTTCATTTTTCAGGAGTGTCAAAAAAACAGATGAAGAT
ATTCCTGTTCCACCACTTATTAAAAGTGCTGCTCTTTGGGGTATGTATATTGTGTA--TTTTTTTCATTTTACTACTTAT
TTTACTTTGACCACATGTTCAGTAATTGCGAATGTGGGTTTGCTGTCCACTAAAGAGATATCTAACAGCTGAGACAGATA
GACATATGATATGGGA-----------AGCACCTGGGTGCTCCACACCCC-ATAGGAACATTAAATTCAAAAAAATACCG
AGAAATTTGAA-AAAAATCTGAGATTTTGGGATATCAAACCTGGGTTCCCTTTCCTGGAAACAGCCTCTCACAGAATTGT
AGGGAAAGGCTGCATACAATAGACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCAAGCGGGAGCTACATGCACCGG
GCTGCCTTTTTC-------TTTTAAACCTTGGTTCCTGACCTACTCCCGTGTGAAATTTCGTGAAAAAATACTAGGAAAC
GTATTCGTGGCAAAAAAGACAAAAAAAATCTTATTTATAGAAAAAAACTGTTTGGATGGATG-TTGTTCGGACAGTATTT
CCTTCGCCACGGATACGTCTCCTGGTATTTTTTCACTAAATTTCACACGGGAGTAGATTGAGAACCCAGGTTTGATATCC
CCAAATTTCAGTTTTTTTT-----------GGTATTTTTTACCTTTAATATTTGTATAAGGGTGTGGAGCACCCAGGAGC
TCCTGTGCATTTTCCATATGATATGAGCATACTTTAATGTTTAATGTCAGTTTCTCTTGGTTTCACTAAAATTTCTTGAA
CATTTCTCTAACTATGTTAATTCAGACATTTC-------------TATAAATTGTTTTTTTTACTTGCTACTCCTGATTT
ATGTCATTTCTTACTATTTATGTCATTTCTTTCTGCAGTGGGCTTCCTGATTTATGCCCCATACTAGTAGTAGCACATAA
CATTTCTATGTTCCATTCCTCAACTGACAATCAATGTTAACTTGTAGGCGTATTCCTTGCTGTATCGTCTAATACACGCT
ATCAGATCATCAATGGTCTGGAGCGAGTAGTTGAGGCATCACCAGTTGCAAAGGGTGCCCCTCCTGTTGCAATGGCTTTC
ACCGTTGGTGTCCGCTTTGCCAATAACATCTATGGTGGTATGCAGTTTATCGACTGGGCTCGATGGAGTGGTGTCCAGTA
ATGGTGAGTGATCCTGTTTTAGTTGTTCATCTTGTCATCATCTTACCAATAGTATGTCATGGAAAATCAA-TTTATACAC
CTATTCGTTGAAACATGAAATGCTTCTAGGTGATGTCCTACCATTATCTTGCATCATTTGGAAAGATGTGTAAACATTCC
ATTTTTTTAAAATAATTCTTGCAGACCCTAAGAAAACATCGAATTGTGCGGTATTCTTCAGGGAGGAATTCAAGCAAGAG
ATCCATACAAGCTTCGTTGTCAGTTTTTC-ACCTTTGCTGAGAGGCAAGCTGCAGCCCTGTGGTGAAATTCGGTCACTGG
G------AGAAGAGCGAAGAAGCAGATGATATTGCAACGTTGAAAGGTTGTCAGACATGAGCTATGAACAGTATCTTTTC
AATTATTTCATTCCTGTACCAAGTCAAACACTCGTGTAACGT--------CGTCGTTTAGTTTAATCACATGAGTAATGT
GATGTGAGTTGACTACCCAAAATAATGGTGTGGGAAGTAGGAAGGATGCCTATTACTACTATTGAAAAAAAAACTGAAAA
AAAATTGTCCGCATC---TATTTTGTGGGAATGATGGTCCAAATTGTCGGCTGACTTAA-----------ACCTCGCTGG
CACACTGGATAATGACGGAAGTACATCTGCC---------GAAAATGACGTGACTGATTCATCATACGACTAGTAATCGA
TTGAAGAAGTCCTAGCATGACAAATCACAACTGAAGGCGTGTTGCAGCTTGCCTAGACCATCCAATCTGAA---------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>SNPs
----------S-SS------------S------------S----------SSS----------------SSS-S-SSSS-
-----S------S-S-S------SS---S------SSSSSSSSSSSSSSSSSSSSSSS-------S--------------
----------------S---------S------------SS-SSSSSSSSSS---S------S-S----SS--S---S--
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S--S---S-S---
----S---------------SS-----------SS--------S---S-----SS-S-SSSSS-S---------------
------------S---S---------S-S-S----------S---------------S---SSS----------------
---SSS-------------------S--S--------SSSSSSS---------------S------SS-------S-S--
------S---S-------SS----S--S-----S------S---S---SSSSSSSSSSS----S----------------
------------------------SSSSSSS----S--S----------S-----------S---------S--------
--------S---S------S------SS-------------------------------S--------------------
--------------------------------SS-----S--S-S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
S------------------------------------------------------------------S------------
-----------------------------------------------------S--------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S--S--S------------------S
-S-----S-------------------------------------------------------------SS---------
--S----SS-----------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------------------------SSSSSS-------------------------
---------------------------S----------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S----------------S------
-------------------------S------------------------------------------------------
-------------S-SSS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-----------------------------------------S--S---------------------S-------------
--------------------------------------S----------------------S----------------SS
------------------------------S--S-----------------S----------------------------
----------------------S------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------SS-----------------------------------------------------S---------
----S------SS-S-SSS--------------------S--------S--------------S----------------
-------------------S-SS----------------SSSS-SS-SSS----------------S-------------
----------------------------S----------------------------------S----------------
--------------------------------------------------------------------------------
---------------S-------------------------------S---SS---------------------------
----S-S-SSSSSS-SSS-------------S--S------------------------SSSSSSSSSSS----------
---------------------S--------SSSSSSSSSS-----------------S--------------------S-
S-----S-----------------------S---------------S------------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_412
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TCCTACCA
TCGAAGCTCCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGGGCTGTTAGGGAGGTTCA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_1898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTGGGATGTTGGCTCCGTAC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_4210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ACAGCCCTGTGGTGACATTC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
