>input_sequence_34974
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--CCCCTGGTCCCTCGCGAGAGCAGGTCCGGGTCGCGTCTCCGGCGGCGGAGAAGCAAG-----GGCGGCGGAGATGTCG
GTCAGCAACATAGGGATGATGGACGGCGCCTACTTCGTCGGGCGGAACGAGATCCTCGCCTGGATCAACACCACGCTGCA
GCTCGGCCTCGCCAAGGTCGAGGAGGTACGCACGGATCTCCCCCCTCCCCTCTCCGCCTCGTCTTCCAATGGCCTGTTCT
TCCCCCGATCCG--------------------TGCGGTTTTGCTGGATCTGCGGGTGCGATTTGTGTTCGATTCGTTGCG
TTTCGGGATGCTCACACGGCGCGCGGCCGGAATTCTCGTGTGTGTGCAGGCGGCGTCGGGCGCGGTGGCGTGCCAGCTCA
TGGACGCGGCGCACCCCGGGGCGGTGCCCATGCACAAGGTCAACTTCGACGCCAAGAACGAGTACGACATGATCCAGAAC
TACAAGGTCCTGCAGGATGTGTTCAACAAGCTAAAGATCACCAAGGTGCGCTCCCATTTCTTCT-CCCCCCTCGTGAGCG
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTTATGTGGCGTTAGTTGTATTGCTCATGCCGCCAGATTACTCCGCACACGAGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATGCACTAAGAATTTGTAGGTT-ATCAGTTCATTGTGGAGTTGTGGTCACCAGAATTCTA
TATACAGACACTGAGCCATGAGTTAGGCAATTGGCTAGTAATTTGATGGGTATATGTAGTTTTGTGGATTGTGAAAGTGA
ACGGTCGAGACATCACATTTTTAGGCTCTTCAAAATACGGATCTGAATAGAAGGTTCCCTAAATA---------------
------------------------------------------------AATAGTGTTTTTTGTTGTGTGGAGAATTGCTA
TATGTTGTCAGAACCGCGTGAAAACTGAAATTCAGTCCTTTTTAACTTAGAAACACATGAGCAGTCTGGATT--------
-------------------------------------------------------------AAAAATATATATCTGAATA
TGCAAACTGTGTACAACCTACATAAATGGTGTTTGTCATCAGAACTGTGTGAAAACTGAAATTCAACCCTTTTGAGCAAT
CTGGATTACCATTGAGCATATCCTTACTTCTTGTTATTCCATAGGGGGGC----TGTTAATGAACATTATGATATTTTGT
CACTGTCGCAGCATATTGAAGTCAATAAGCTCATCAAAGGAAGGCCCCTAGACAACCTGGAGTTCATGCAGTGGATGAAA
AGATACTGTGATTCTGTTAATGGTGGATTCATGACCAGGTAGCCAACCCCATTCTTTCTGTAACATATATGACCAG----
----------------------------------TAGTGTTACCAATTGTGCTTATCATATCTCATGAAAATCCTC----
---------------------TGAACACGCAGCTACAATGCTTCCGAGAGAAGAGAAAGCAGCAAGGGTGGGAAAGACAC
CAACAGAAGGACATCAGGGACTTCCCAGGCGCCTGCCAAGTCTGCATCTGCCACCCACAAAGCTCAGCCTCCGTCGCATG
CTGCTAAGCGAGCCAACGGGCATGCTTCAAATGCTCCACAGCGGTGTGCAAGGCCGCCTCCAGCTGCAGCACCAGCTTAT
------------GATGCACAGGTGAGAGTGACTTGGCATGAACGCTGAGCATAACTTTCTTGCTGTCTCTCGGCATTGCA
CAAGTCCTGTATTCTGACAATGATGCTTTGCAGATGACCGAGCTGAAACTCCTTGTTGATAGCGCCGAGAAAGAGAGAGA
TTTCTATTTCTCTAAGCTGCGGGACGTTGAGATCTTGTGCCAGAGCCCCGAGGTTGAGCATTTACCGGTAAGTAGCAGAA
ATGCTTG-------------------------------------------------------------------------
----------------------------------------------------------TAGACATCATGCTTGTAGAGTA
CAACAGCAGGTGTCTGAACGTCTAAACATCATGCTTGTAGAGTACAACAGCAGGTGTCTGAACCTTGATCTATGTATTTG
AAAGGGCAATGTTGACGATGAAATCTTTATCTTGTGTGCAGATTGTGAAGGCCATCCAGAAGATACTCTATGCTTCGGAG
GACGACCCCTCGACGGTGGCGGAAGCCCAGGCAGAGATGGTGGCGCAGCAGAACCAGATGCAGCAGCAGCCAATGCTGAG
CCCGATCCTGGAGGCGTCTGAGGCCCCAAGCATCACCCCCAAGGATTCTTCCGAGGAGAGCTTGAGGCAGGAAGCAGCGG
CAGCACACAAGAGGAAGAGCATCTCGGACCTGGAGGAGTTCGAGATGGGGTCGAGCTCCAGGATGAGGCTCTCGGACGTC
TCGGACGTGCAGCTGTGCGGCTCACCGTTGATGAGCTTCACCTGAAAGAAAGGAGGGACCGAATTGCAGGGGCTGAGTTG
TTGTCATTACCGGTTATGACTTGTGGGTTTATCTTGTGTTGTTTCGTTCGTTGTTTGGTGTTAT----------------
--------------------------------------------------------------------------------
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----
>chr1D_1_TraesCS1D01G167800
ATGGTGGGAAGCTAGGGTGCGCTACAACGCTGGAGTTGTGTGTGTGTGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGT
GAGGAAGGAGAAGAATCGGAGGCAATCTAACATTGCGGGATGTTTCAATCTGACGGTGGACACAGCGACCGATCTGGCAT
CTACCCGGTCGACCGGCATCGGCCTTCCCCTTTTTGGTGAGTGATGTAAGTTGGCAGGCTTGG-GGAGCATGACCACCCG
TTCGATCGAACGCGATTA---CTCGTAGCAAAAAGCAACGGGCAGAATTCGCTGAAACCGAAAACGCTCCACCGTTGCCC
ATAGGGCCACAG-----------------------------CTATGCCAGCCCAACGCGAGTCGCCTTCACACCGCGAGA
GACGCGACGGTTGCACCACTGCTAAACCCCAAAATTCGAAATCTCCCAACCGTGCGAAAATACGAGACAGCCCCTGACCA
CCCGCACCGCTCCCAACGGTCGGACCAATCCGGCCGTCCAGGCGCAC-CCGGCGCTCGGGCATACCCGTCGAGATTCGAA
TCCCC-TCCCTGCCCTGGCCGCACCGCAGACCTAGGAGGGCAGAACCGTCCGACGAAGAAGTCTCTCTCACCTTATATCT
TGGCCGAATCCCCAACG-----CCGCATTCGAAAACCTTCCTCGCGAAACACCAGCCCCGCTCCTCACCCT--CCCCCAC
CTCCCCTGGTCCCTCGCGAGAGCAGGTCCGGGTCGCGTCTCCGGCGGCGGAGAAGCAAG-----GGCGGCGGAGATGTCG
GTCAGCAACATAGGGATGATGGACGGCGCCTACTTCGTCGGGCGGAACGAGATCCTCGCCTGGATCAACACCACGCTGCA
GCTCGGCCTCGCCAAGGTCGAGGAGGTACGCACGGATCTCCCCCCTCCCCTCTCCGCCTCGTCTTCCAATGGCCTGTTCT
TCCCCCGATCCG--------------------TGCGGTTTTGCTGGATCTGCGGGTGCGATTTGTGTTCGATTCGTTGCG
TTTCGGGATGCTCACACGGCGCGCGGCCGGAATTCTCGTGTGTGTGCAGGCGGCGTCGGGCGCGGTGGCGTGCCAGCTCA
TGGACGCGGCGCACCCCGGGGCGGTGCCCATGCACAAGGTCAACTTCGACGCCAAGAACGAGTACGACATGATCCAGAAC
TACAAGGTCCTGCAGGATGTGTTCAACAAGCTAAAGATCACCAAGGTGCGCTCCCATTTCTTCT-CCCCCCTCGTGAGCG
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTTATGTGGCGTTAGTTGTATTGCTCATGCCGCCAGATTACTCCGCACACGAGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATGCACTAAGAATTTGTAGGTT-ATCAGTTCATTGTGGAGTTGTGGTCACCAGAATTCTA
TATACAGACACTGAGCCATGAGTTAGGCAATTGGCTAGTAATTTGATGGGTATATGTAGTTTTGTGGATTGTGAAAGTGA
ACGGTCGAGACATCACATTTTTAGGCTCTTCAAAATACGGATCTGAATAGAAGGTTCCCTAAATA---------------
------------------------------------------------AATAGTGTTTTTTGTTGTGTGGAGAATTGCTA
TATGTTGTCAGAACCGCGTGAAAACTGAAATTCAGTCCTTTTTAACTTAGAAACACATGAGCAGTCTGGATT--------
-------------------------------------------------------------AAAAATATATATCTGAATA
TGCAAACTGTGTACAACCTACATAAATGGTGTTTGTCATCAGAACTGTGTGAAAACTGAAATTCAACCCTTTTGAGCAAT
CTGGATTACCATTGAGCATATCCTTACTTCTTGTTATTCCATAGGGGGGC----TGTTAATGAACATTATGATATTTTGT
CACTGTCGCAGCATATTGAAGTCAATAAGCTCATCAAAGGAAGGCCCCTAGACAACCTGGAGTTCATGCAGTGGATGAAA
AGATACTGTGATTCTGTTAATGGTGGATTCATGACCAGGTAGCCAACCCCATTCTTTCTGTAACATATATGACCAG----
----------------------------------TAGTGTTACCAATTGTGCTTATCATATCTCATGAAAATCCTC----
---------------------TGAACACGCAGCTACAATGCTTCCGAGAGAAGAGAAAGCAGCAAGGGTGGGAAAGACAC
CAACAGAAGGACATCAGGGACTTCCCAGGCGCCTGCCAAGTCTGCATCTGCCACCCACAAAGCTCAGCCTCCGTCGCATG
CTGCTAAGCGAGCCAACGGGCATGCTTCAAATGCTCCACAGCGGTGTGCAAGGCCGCCTCCAGCTGCAGCACCAGCTTAT
------------GATGCACAGGTGAGAGTGACTTGGCATGAACGCTGAGCATAACTTTCTTGCTGTCTCTCGGCATTGCA
CAAGTCCTGTATTCTGACAATGATGCTTTGCAGATGACCGAGCTGAAACTCCTTGTTGATAGCGCCGAGAAAGAGAGAGA
TTTCTATTTCTCTAAGCTGCGGGACGTTGAGATCTTGTGCCAGAGCCCCGAGGTTGAGCATTTACCGGTAAGTAGCAGAA
ATGCTTG-------------------------------------------------------------------------
----------------------------------------------------------TAGACATCATGCTTGTAGAGTA
CAACAGCAGGTGTCTGAACGTCTAAACATCATGCTTGTAGAGTACAACAGCAGGTGTCTGAACCTTGATCTATGTATTTG
AAAGGGCAATGTTGACGATGAAATCTTTATCTTGTGTGCAGATTGTGAAGGCCATCCAGAAGATACTCTATGCTTCGGAG
GACGACCCCTCGACGGTGGCGGAAGCCCAGGCAGAGATGGTGGCGCAGCAGAACCAGATGCAGCAGCAGCCAATGCTGAG
CCCGATCCTGGAGGCGTCTGAGGCCCCAAGCATCACCCCCAAGGATTCTTCCGAGGAGAGCTTGAGGCAGGAAGCAGCGG
CAGCACACAAGAGGAAGAGCATCTCGGACCTGGAGGAGTTCGAGATGGGGTCGAGCTCCAGGATGAGGCTCTCGGACGTC
TCGGACGTGCAGCTGTGCGGCTCACCGTTGATGAGCTTCACCTGAAAGAAAGGAGGGACCGAATTGCAGGGGCTGAGTTG
TTGTCATTACCGGTTATGACTTGTGGGTTTATCTTGTGTTGTTTCGTTCGTTGTTTGGTGTTATAATGTGTGTGCTCTTG
TGGAGCTGGAGTTGAACCTGCCTTTGACTGTGATTGATCTGCCACAGCATTTGTGGCCTTCTGCAACATGTTATTATTGA
ATAGCCTCTTTTATGTAGTCACTGGTGTTCCTTGCTCTGCCTCTTTTATTGCAGGACGGTCTGTTTTCGACTCCAAAAAG
GTTGCTGCGCTGTGACTTTTTTGTTAGCGGGTATCCCTGGAATACAAATTCTGTGCTGGCGCCTGAATCCTCTTCATCTT
TCCCTGTCCGCCGTCGTTGCATTCTCTCCGCTGGCATCATCGAGCTCGACCAACCTGCCATTATACTCCCTCCGTTCACG
ATTGAGTCATCTATTTTGGAACGGAGGAATTACTGTGCTGGCAA------------------------------------
-------------------------------------------------------------------------------T
AATTTTTCTTTGAATTTAGTGTTTTGGTGGCCCGGTGATTTTTTTGGAGGTGGGTCG-TGCTAATGAAGATTATCTGGTG
GCAAAAGGGATATTGCCAATGCACTCTAATTAATAAAAGAAGCTCAATG----CGGATGCAAAGGGAACAAGTTGTTGAA
GTATCTGGGAAGA-TTTACCTGAGGATTCAGGTTGCATTTTGATTCTCTTCTGCACTGGCGTCTCTCAGTTATCTACTTA
TCTGTTTATA-------TTACTGTCGTTTTCACCATTAAGAC-----------TCTCTTTTGTATTAACATTACTTACTG
AATTATGTGTTCACAATACATTTCATATTATATAACCATCGAGACTATGTACAGGAGAAGACACTGAGCCTGCAAATACA
GACATAGAATGCTCCACATCTAGGGATTCAGGTCACACTTTGATTCTCTTCTGCATTAACATTACTTCTGAATTATGTGT
TCGCAATACATTCTCTATTAGAGTTTATTAATGATGTTTTCACTGTTGACATGTA-TACAGGAGAAGACACCGAGGACAT
TCCTTATGAAAATGAATCTTCTTTTGAGCTAGATAATAGTCACACACCTTCAAGGCCTCATTATGTCTTATATCAGGGAA
GTGC
>chr1A_527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAAGTTCGCAGGCTTGGTGGAGCAGGACCACCCG
TTCGATCACACGCTATTACTCCTCGTAGCAAAAAGCAACGGGCAGAATTCGCTGAAACCGAAAACGCTCCACCGTTGCCC
ATAGGGAAACATTTACGCCAGCCCTTTGTCGAAAAAAAAAACTATGCCAGCCCAACGCGAGTCGCCTTCACACCGCGAGA
GACGTGATGGTTGCAGCACGCCTAAA-CCCAAAATTCGAAATCCCCCAACCGTGCGAAATTACGAGACAGCCCCTGGCCA
CCCGCAGCGCTCCCAACGGTCGGACGAATCCGGCCGTCCACGCGCACCCCGGCGCTCGGTCACACCCGTCGAAACCTGAA
TCCCC-TCCCAGCCCTGGCCGCACCGCAGACCTAGGAGGGTAGAACCGTCCGACGCAAAAGTCTCTCTCACCTTATATCT
CGGCCGAATCCCCCAACGCCGCCCGCATTCGAAAACCTTCCTCGCGAAACCCCAGCCCCGCTCCTCCGCTCCACCCCCAC
CTCCCCTGGTCCCTCGCGAGAGCAGGTCCGGGTCGCGTCTCCGGCGGCGGAGAAGCAAGACAAGGGCGGCGGAGATGTCG
GTCAGCAACATAGGGATGATGGACGGCGCCTACTTCGTGGGGCGGAACGAGATCCTCGCCTGGATCAACACTACCCTGCA
GCTCGGCCTCGCCAAGGTCGAGGAGGTACGTTCGGATCTCCCCCCTCCCCTCTCCACCTCGTCTTCCAATGGCCTGTTCG
TCCCCCGATCCG--------------------TGCGGTTTTGCTGGATCTGCGGGCGCGATTTCGGTTCGGTTCGTTGCG
TTTCGGGATGCTCACACGGCGCGCGGCCGGAATTCTCGTGTGTGTGCAGGCGGCGTCGGGCGCGGTGGCGTGCCAGCTCA
TGGACGCGGCGCACCCCGGGGCGGTGCCCATGCACAAGGTCAACTTCGACGCCAAGAACGAGTACGACATGATCCAGAAC
TACAAGGTCCTGCAGGATGTGTTCAACAAGCTGAAGATCACCAAGGTGCGCTCCCATTTCTTCTTCCCCTCTCGCGAGCG
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTTATGTGGCGTTAGTTGTATTGCTCATGCCGCCAGATTACTCCGCACACGAGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATGCACTAACAATTTGTAGGTT-ATCAGTTAATTGTGGAGTTGTGGTCACCAGAATTCTA
TATACAGACACTGAGCCATGAGTTCGGCAATTGGCTAGTAATTTGATGGGTATATGTAGTTTTGTTGATTGTGAAAGTGA
ACGGTCGAGACATCACATTTTTAGGCTGTTCAAAATACGGATCTGAATAGAAGGTTCCCTAAATA---------------
------------------------------------------------AATAGTG-TTTTTGCTGTGTGGAGAATTGCCA
TGTGTTGTCAGAACCGCGTGAAAACTGAAATTCAGTCCTTTTTAACTTTGAAGCACATGAGCAGTCTGGATTCTTATTGA
GGATATCCTTACTTGTTAAGTACTTCCATAGGGACTATTAGTGTAACTGAATTTTATATAAAAATATATATATCTGAATA
TGTAAACTGTGTACAACCTACATAAATGGTGTTTGTCATCAGAACTGTGTGAAAACTGAAATTCAACCCTTTTGAGCAAT
CTGGATTACCATTGAGCATATCCTTACTTCTTGTTATTCCTTAGGGACTGTTAATGTAACTGAACATTGTGATATTTTGT
CACTGTCGCAGCACATTGAGGTTAATAAGCTCATCAAAGGAAGGCCCCTAGACAACCTGGAGTTCATGCAGTGGATGAAA
AGATACTGTGATTCTGTTAATGGTGGATTCATGACCAGGTAGCCAACCCCATTCTTTCTGTAGCATATATGACCAGG---
----------------------------------TAGTGTTACCAATTGTGCTTATCATATCTCATGAAAATCCTC----
---------------------TGAACACGCAGCTACAATGCTTCCGAGAGAAGAGAAAGCAGCAAGGGTGGGAAAGACAC
CAACAGAAGGACATCAGGGACTTCCCAGGCGCCTGCCAAGTCTGCATCCGCCACCCACAAAGCTCAGCCTCCGTCGCACG
CAGCTAAGCGGGCCAACGGGCATGCTTCAAATGCTCCACAGCGGTGCGCAAAGCCGCCT------------CCAGCTTAT
------------GATGCACAGGTGAGAGTGACTTGGCATGAACGCTGAGCATAACTTTCTTGCTGTCTCTCGGCATTGCA
CAAGTCCTGTATTCTGACAATGATGCTTTGCAGATGACCGAGCTGAAACTCCTTGTTGATAGCGCCGAGAAAGAGAGAGA
TTTCTATTTCTCTAAGCTGCGGGACGTTGAGATCTTGTGCCAGAGCCCCGAGGTTGAGCATTTACCGGTAAGTAGCAGAA
ATGCTTAACCATTCTCTTACTAGGCGCCTGCCAATTGGCTACCAGT----------------------------------
------------------------------GTGTTAAAAAAAGCCTTCTGAACAAGTGTAAACATCATGCTTGTAGAGTA
CAACAGCAGGTGTCTGAACGTGTAAACATCATGCTTGTAGAGTACAACAGCAGGTGTCTGAACCTTGATCTATGTATTTG
AAAGGGCAATGTTGACGATGAAATCTTTATCTCGTGTGCAGATTGTGAAGGCTATCCAGAAGATACTCTATGCTTCGGAG
GACGACCCCTCGACGGTGGCGGAAGCCCAGGCAGAGATGGTGGCGCAGCAGAACCAGATGCAGCAGCAGCCAATGCTGAG
CCCCATCCTGGAGGCGTCCGAGGCCCCAAGCATCACCCCCAAGGATTCTTCCGAGGAGAGCTTGAGGCAGGAAGCAGCGG
CAGCACACAAGAGGAAGAGCATCTCGGACCTGGAGGAGTTCGAGATGGGGTCGAGCTCCAGGATGAGGCTCTCAGACGTC
TCGGACGTGCAGCTGTGCGGCTCACCGTTGATGAGCTTCACCTGAAAGAAAGGAGGGACCGAATTGCAGGGGCTGAGTTG
ATGTCATTGCCGGTTATGACTTGTGGGTTTATCTTGTGTTGTTTCGTTTGTTGTTTGGTGTCATAATGTGTGTGCTCTTG
TGGAGCTGGAGTTGAACCTGCCTTTGACTGTGATCGATCTGCCACAGCATTTGTGGCCTTCTGCAACATGTTATTATTGA
ATAGCCTCTTTTATGTAGTCACTGGTGTTCCTTGCTCTGCCTCTCTTATTGCAAGACGGTCTGTTTTCGATTACAAAAAG
GTTGCTGCGCTCTGATTTTTTTGTTAGCGGGTATCCCTGGAATACAAATTCTGTGCTGGTGCCTGAATCCTCTTCATCTT
T-CCTGTCCGCCGTCGTTGCATTCTCTCCGCTGGCATCATCGAGCTCGACCAACCTGCCATA------------------
------------------------------TAGTGTGCTGGCAAGACAGCTTTCCCATCATCAAGGGCCTTGTGCTGGTG
GAGGGACACGTGAAGCAGTTCACAATAGATACAAATGCCTG----------------------------AACCATAAGGT
ATGTTTTCTTTGAATTTAGTGTTT-GGTGGCCCTGTGATTTTTTTGGAGGTGGGTCGATGCTAATGAAGATTATCTGGTG
GCAAAAGGGATATTGCCAATGCACTCTAATTAATAAAAGAAGAAGCTCAATGTCGGATGCAAAGGCAAGAAGGCGTTGAA
GTATCCGGGAAGATTTAACCTGAGGATTCAGGTTGTATTTTGATTATCTTCTGCGCTGGCGTCTCTCAGTTATCTGTTTA
TGTTACTATCATTATATTTACTGTCGTTTTCACCATTGAGGTTACATTATGATTCTCTTTTGTATTAACATTACTTACTG
AATTATGTGTTCACAATACATTTCATATTATATAACCATCGAGACTATGTACAGGAGAAGACACTGAGCCTGCAAATACA
GACATAGAATACTCCACATCTAGGGATTCAGGTCACACTTTGATTCTCTTCTGCATTCACATTACTTCTGAATTATGTGT
TCACAATACATTCTCTATTGGATTTTATTAATGCTGTTTTCACTGTTGACATACACACAGGAATAAGACACCGAGGACAT
TCCTTCTGAATATGAATCTTCTTTTGAGCTAGATGATAGTCACACACCTCCAGGGCATGATTATGTCTTACATCAGGGAA
----
>chr1B_528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAGTTCGCAGGCTTGGTGGAGCAGAACCACCCG
TTCGATCACACGCGATTACTCCTC-TAGCAAAAAGCAACGGGCAAAATTCGCTGAAACCGAAAACGCTCCACCGTAGCCC
ATAGG-CCACAG-----------------------------CTATGCCAGCCCAACGCGAGTCGCCTTCACACCGCGAGA
GACGTGAAGGAGATGCA------------------------------------------------------CCCTGGCCA
CCCGCGCCGCTCCCAACGGTCGGACGAATCCGGCCGTCCACCCGCG-CCCTGCGCCCGGGCATACCCGTCGAAATCTGAA
CCCCTTTCCCAGCCCTGGCCGCACCGTAGACCTAGGAGGGCAGAACCGTCCGGCGCAAAAGTCTCTCTCACCTTATATCT
CGGCCGAATCCCCAACG-----CCGCATTCGAAAACCTTCCTCGCGAAACCCCAACCCCGCTCCTCTGCTCTCCTCCT--
----CCTGGTCCCTCGCGAGAACAGGTCTGGGTTGCGTCTCCGGCGGCGGAGAAGCAAG-----GGAGGCGGAGATGTCG
GTCAGCAACATAGGCATGATGGACGGCGCCTACTTCGTGGGGCGGAACGAGATCCTCGCCTGGATCAACACCACGCTGCA
GCTCAGCCTCGCCAAGGTCGAGGAGGTACGCACGGATCTCCCCCTCCCCC-CTCCACCTCGTGTTTCAATCGGCTGTTCG
TCCCCCGATCCGCGCGGTTTGCCTCCAGGCGCTGGGGTTCTGCTGGATCTGCGGGTTCGATTCGTTGT-----------G
TTTCGGGATGCTGACATGGCGCGCGGCCGGAATTCTC----GTGTGCAGGCGGCGTCGGGCGCGGTGGCGTGCCAGCTCA
TGGACGCGGCGCACCCCGGGGCGGTGCCCATGCACAAGGTCAACTTCGACGCCAAGAACGAGTACGACATGATCCAGAAC
TACAAGGTCCTGCAGGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTATGTGGCGTTAGTTGTATTGCTCATGCCGCCAGATTACTCCGCACACGAGGCTGATTTAGATTT
TGGCCGTGCTGTGTGGGCGCGTGTTTGTTCGGTAGCCTGTAGTTTCTGTAAGAAACGATTGATTGCCCCGAATTCTGATT
CTAGATCCAGTGGTATGTACTACTGCATGGACTTGGAGAGGACCCAAGGTTGCAACTACGCTTGGTTACCAGAAATTGCA
GTGGATTTCTAGAGTTTTGTGTTTTATTTCAGTGGTGCCAGAGTTGTATGCAGTTCTAAGGTTGAGACAACCGAACAATA
CCAAGGCATAGAACACTTAGATGCACTAAGAATTTGTAGGTTTATCAGTTCATTGTGGAGTTGCGGTCACCAGAATTCAA
TATACAGACACTGAGCCATGAATTAGGCAATTGGCTAGTAATTTGATGGGTATATGTAGTTTTGTGGATTGTGGAAGTGA
AGGGTCAAGTCATCAATTTTTTAGGCTGCTAAAAATACGGATCTGAATTAGTTCAAGTTCATAAGCCCAATGAAAAGAAG
GTTACCCTATTAGCTATATAGTATTTTTAAACTGTGTACAACCTAAATAATGGTGTTTTTTGCTGTGTGGAGAATTGCC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GTTTGTCATCAGAACTGTG--AAAACTGAAATTCGATCCTTATGAGCAAT
CTGGATTATTATTGCTTATATCCTTACTTCTTTTTATTCCATAGAGACTATTAATGTAACTGAACATTATGATCTTTTCT
CACTGTTGCAGCATATTGAAGTGAATAAGCTCATCAAAGGAAGACCTCTTGACAACTTAGAGTTCATGCAGTGGATGAAA
AGATATTGTGATTCTGTCAATGGCGGATTCATGACCAGGTACTCAACCCCCTTCTTTCTGTAGCATAGATGACCAATTTA
ATTGTTGCTATCTCTCAAATGCTCTCAGCCTGTTTAGTGTTACCAATTGTGCTAATCATATCTGTTTAAAATCCTCTTAA
CACTTGTCTCTTGTTGTGTTATGAACACACAGCTACAATGCTTCTGAGAGAAGAGAAAGTAGCAAGGGTGGGAAAGACAC
CAACAGAAGGACATCAGGGACTTCCCAGGCACCTGCCAAGTCTGCATCCGCCACCCACAAAGCTCAGCCTCCACCGCACG
CTGCTAAACGGGCCAATGGGCATGCTTCAAATGCTCCACAGCGGTGCGCAAAGCCACCT------------CCAGCTGCA
GCGCCAGCTTACGATGCACAGGTGAGAGTGACTTGGCATGAGCGCTGAGCATAACGTTCTTGCTGTCTCTCGGCATTGCA
CAAGTCCTGTATTCTGACAATGATACTTTGCAGATGACCGAGCTGAAACTCCTTGTTGATAGCGCCGAGAAAGAGAGGGA
TTTCTATTTCTCCAAGCTGCGGGACGTCGAGATCTTGTGCCAGAGCCCAGAGGTTGAGCATTTACCGGTAAGTAGCAGAA
ATGCTTGACCATTCTCCTAGTTTGTGTCAGTTGCTGAGTTTTAAGCTTGTCAATGATGCAACAGTAGGTCATCATACCCA
ACTTATTACTGTGTTCAGCACTGTTGACGAGTCTTAAAAAAAACCTTCTGAACAAGTGTAAACACCATGCTTGTAGAGTA
CAACAGCAGG----------------------------------------------------------------------
-----GCAATGTTGATGATGACATCTTTATCCTGTGTGCAGATTGTTAAGGCCATCCAGAAGATACTCTACGCTTCGGAG
GATGACCCCTCGACGGTGGCAGAAGCCCAGGCGGAGATGGTGGCGCAGCAGAACCAGATGCAGCAGCAGCCAATGCTGAG
CCCGATCCTGGAGGCGTCTGAGGCCCCAAGCATCACCCCCAAGGATTCTTCCGAGGAGAGCTTGAGGCAGGAAGCAGCGG
CAGCACACAAGAGGAAGAGCATCTCGGACCTGGAGGAGTTCGAGATGGGGTCGAGCTCCAGGATGAGGCTCTCAGACGTC
TCGGATGTGCAGCTGTGCGGCTCACCGTTGATGAGCTTCACCTGAAAGAAAGGAGGGACCGAATTGCAGGGGCTAAGTTG
TTGTCATTGCCG-------------------------GTTGTTTCGTTTGTTGTTTGGTGTTATAATGTGTGTGC-----
---------------------CTTTGACTGTGATCGATCTGCCACAGCATTTGTGGCCTTCTGCAACATGTTATTATTGA
ATAGCCTCTTTTATGTAGTCACTGGTGCTCCTTGCTCTGCCTCTTTTATTGCAAGACGGTCTGTTTTCGATTCCCAAAAG
GTTGCTGCGCTCTGA---TTTTGTTAGCGGGTATCCCT---------ATTCTGTGCTGGCGCCTGAATCCTAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACGTGAAGCAGTTCAAAATGGGAACAAGAAATGGCAACGTGCATCGGAATTTCTACAAATGCAACCATAAGGT
AAGTTTTCTTTGAATTTAGTGCTC-GGTGGCCCTGTGATTTTTTTTGAGGTGGGTCGATGCTAATGAAG-----------
------------------------------------AAGAAGCTCAATG----CGGATGCAAAGGCAAGAAGTCGTTGAA
GTATCTGGGAAGA-TTTACCTGAGGATTCAGGTTGCATTTTGGTTCTCTTCTGCACTGACGTCTCTTAGTTATCTGTTTA
TATTACTATGTAA-------------------------------------------------------------------
----------------------------------------------------AGGAGAAGACACCGAGCCTGCAAATACA
GACATAGAATACTCCACATCTAGGGATTCAGGTTACACTTTGATTCTCTTCTGCATTAACATTACTTTTGAATTATGTGT
TCACAATACATT----ATTAGATTTTATTAATGATGTTTCCACTGTTGACATGTACTACAGGAGAAGACACCGAGGACAT
TCCTTATGAAAATGAATCTTCTT---------------------------------------------------------
----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------S---------
-------SS-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--S-----------SS-----S----------------S---------------S----------------S---
-------------------------S--------------S-------------------------------S--SS---
----------S--------------------------------------------S-S----------------------
S-------------------------------------------------S---------------SS-SS---------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------------------------------------------S-----------------------S
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S------------------------------------S----S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------S---------------S-
-S----------------------------------------------S---S---------------------------
----------------------------------------------------------------S---------------
--S-----------------------------------------------------------------------------
----------------------------------------------SSSS-------S-S--------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----------------------------S-
----------S-----------------------------------S----S-------SSSSSSSSSSSS---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------S---------------------------------------S-------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------S----------------S---------
-----------S---S----------------------------------------------------------------
-S-----------------------------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------------------------------------------
--------------------------------------------------------------------------------
--S---------------------S--------S----------------------------------------------
-----------------------------------------------------------------S--S----S------
---------------------------------------------------------------------------SS---
-S-SSS---S---------------------------S--SS--------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--S-------------------S---------------------------------------------------------
----------------------------------S--------------S--S---S-S-----------S---------
SSSS
>forward_44
------------------------CAACGCTGGAGTTGTGTGTG------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_2482
--------------------------------------------------------------------------------
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-ATGTTGTCAGAACCGCGTGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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----
>forward_485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------CGACCGATCTGGCAT
CTACC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_3271
--------------------------------------------------------------------------------
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----------------------------------------------------------------------ACCAGCTTAT
GATGCACAGGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----
>forward_747
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------CGGTTGCACCACTGCTAAAC-----------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_3702
--------------------------------------------------------------------------------
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---------------------CTAAACATCATGCTTGTAGAGTACAA---------------------------------
--------------------------------------------------------------------------------
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----
>forward_1590
--------------------------------------------------------------------------------
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--------------------------------------------------GCTCCCATTTCTTCTCCCCC----------
--------------------------------------------------------------------------------
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----
>reverse_4169
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--------ACCGGTTATGACTTGTGGGT----------------------------------------------------
--------------------------------------------------------------------------------
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----
>forward_3702
--------------------------------------------------------------------------------
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--ACAGCAGGTGTCTGAACGTC----------------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_4545
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------ACTCCCTCCGTTCACG
ATTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
