>input_sequence_34852
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-----------------------------------ATGCTATCCCGCGCCCGGCGCCTCCACCCCGCTCTCCGCTGCCTC
CTACGTGCAACCGCTGCACACTCGTCACCTCACCCTCCTCCGACGCAACACATCGTAGCTGCCTCCCAAATCCCTAAACC
CTTCCCCCTCTTGCGCCGCCACCTCTCGTCCCCACCGCCGCCGCCGCCGTCGCCGGTGTCTTCCCCTCCGGCGGTGGTAT
CTTCTGACCTCCCAGCCGTCTGTACCAATGGCAAGTGCCCGGGCTGCGGCATCGCCATGCAGTCCGCCGACCCGGCCCTC
CCTGGCTTCTTCAACCTCCCATCCCCCAAGTCTCCCGACTACCGCGCGCGCCTCGCGCCCGTCACCGCCGACGACACCGG
CATCTCGGCCTCTCTGAAGAGCGGGCTCCTCCAGGAGGGCCAAGAGAAGTCACGGGAGGGCCAGGCGGTGGCGGTGGTGG
CAT------CGGAGGCGGAGGCCGAGAAGAAGAGCAAGGTGGTGGTGTGTGCTCGGTGCCACTCGCTGCGCCACTACGGC
CACGTCAAGCGCCCCGACGCCGAGGTCCTGCTCCCGGACTTCGACTTCGTGGCCGCCGTCGGCCCGCGCCTCGCGTCGCC
CTCGGGGGCCAGGTCGCTGGTGCTGCTCCTCGCGGACGCGTCGGACTTCGACGGATCCTTCCCACGCGCCGTGGCGCGCC
TGGTCGCCGTCACCAGCGAGGCCCACCACGCGGACTGGAAGCATGGTGCGCCGTCTAACCTCCCCCGCGCAGTGCTCGTG
GTCACCAAGCTCGACCTGCTCCCGACGCCGTCGCTTTCCCCCGACGACGTGCACGCGTGGGCGCAGGCCCGCGCGCGCGC
CGGTGCTGGCGCGGACTTGCAGCTTGCCGGCGTTCACCTTGTCAGCGCCGCGCGTGGGTGGGGGGTGCGCGACCTGCTCA
ACCACGTGCGCGAGCTCGCAGGGGCGCGCGGAAAGGTCTGGGCTGTTGGCGCGCGGAATGTGGGCAAGTCGACGCTGCTC
AACGCCATTGCTCGGTGCTCTGGGGCAGAGAGCGGGCAGACCTTGACAGAGGCGCCTGTCCCGGGGACAACCCTCGGGGT
GATCCGGGTGGACGGAGTTCTTGGTGCTCAGGCGAAGCTGTTTGATACTCCGGGCTTGCTTCATGGACATCAGCTCACGT
CGAGACTTACACCCGAGGAGCAGAAGCTTGTTCAAGTGAGGAAGGAGATGCGACCCAGAACATACAGAATAAAGGTCTCA
TTCCGTCCATATTATGCACATTTTGTCAGTGAATTTTGTGAGTAGGTGCTATGGGCATAAATTTTCTGCTTGTTTCCTCG
TATCCTTGGACGCCCACATTTCTTGCTTGTTCTATTATGTGCTACATAG----ATCTGCTTTTCATTAAGCAGTTGTGAT
TATGTGA------------------------------GGGGTAATTACTTCACCCTCTAAACAGTAACCATACTAATGTT
AGTCTGAAACTGAAGTTGACAAATGTGTGATGATATACTGGATTGGGAAATTGACACCCTGAGTGTGCTTAGAAAGTTTC
AGTTCTTAGACCTTTGACTATATATATCACATGTCTGGTTCAATCCGAAATAACATGAATAGTCTTTTGATAAGAGTTAT
TTGTGTGACCGGATTCT-TAGTTCTAATTCGTTTTGTTCATAACCTTTTCAGGCAGGGCAGTCCATACATATAGGAGGAC
TGGCACGCCTGGATGTGGAAGACTTGACTGTAGGATCAATCTATGTTACGGTTTGGGCATCACCACTTGTGCCACTTCAC
ATGGGGAAGACCGAAAATGCAGAGTCTATGATGAAAGATCACTTTGGTTTGCAACTGCAGGTA---TCTATCTTATCCTT
AAAAAA-GCGTTGTTTTT-TCCTAATTCATTTACATCATAAAATAACTTGCTGCTTGGTGTGATATGTGCAGCCTCCTAT
AGGCCAGAAACGAGTGAAGGAGCTTGGGAAATGGGTGAGGAAACAATTCAAAGTTTCTGGAAATAGTTGGGATGCAAATA
CTATGGATATAGCCATTTCAGGTCTTGGCTGGTACGGAATCGGGCTGAAAGGAGAGGCAGTGTTAGGGTTATGGACATAC
GATGGTGTTGATGTTGTCCCCAGGAGCTCCCTTGTCCATGAGAGGGCGTCAATTTTTGAGGAAACGGGATTCTCAGTTTC
AAAAGTCGTCTCACGGGCAGATAGCATGACGAATAAGCTGAAAGGCAATAAGAAAACAAACAAGAAGGAGATGAAAGCCA
GTTCACATTCTTCTGAAGTACCAGAATCTTCAGAACCTGCTACGGTCATAGATGCTTGA---------------------
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>chr5D_1_TraesCS5D01G199400
TCAGAGGTTCAGTTTTCTTTTTTGTCAAAGTCACATGCAGCCATATTTTTGCACAAACTTTGCACGCAACCGTGTGTAGA
ATTCAGGTCCTCTACAAAAGTTG-GACTGGCCAAGCAGGTGGAAACAAAACTGAAGATTATATCTTCTAGTG-------A
GGGAACTACTTGTCGCCAATGAATCAAGCATGGAATGATAATTCCAGCACTAGAAAATCGCTGATGATAATTTCCAGTAC
TAGAAAAACACGATAAAAAATTTATACCAAGAAGGCGAAATCATGGATATGAATCTACGCCTATAGCACTTATAAGCACC
ATATCTCTTGCTGCGATGCAGGAATAACCTCGGCGTTTCTTCATTGAATAGGTAGATCTATATATGATTTTTCAATTCGT
TGAATATAACAAACAATGCTGAGCTACCGTGGATAAGAACACATCATATTGTAATTTCACAAAGAGCAAA----------
-----------GC-----------------TAAGATCTAAGCCGAGGATTCCGATCCCTCCAGTTCCACCGCAATTGACT
CAACG-ACAATCGACTAGTACAAGCAAGGGAGGGGGTGGAGAGCGTACGTGGTGGCGGCGGACTCCTCCTCGAGCCAGGT
CTTGATGTGGCGAATGTTGCGGCGGAAGACGGCGGACGACTGCTTCACGTCCTTCCGCAGCAGCATCACCGCCGCGCCCA
CGCCCACCACCGTCAGGATCAAGTTGGTCAACGCCATCGCCT-----------CTCTGTAGAACCCTAGCGCGTGGTGTG
GATCGTCGCCGGAGTTTGGGGCGAGAAAGGGCCTGCTGACGGCGTCGGAGCAGAGAGATGTTCGCTGCGTTGTGCCGAGG
CGTTGAGATATGGGCTTCCCTGCTCGACTTGATAAG----GTCATGTGCGGAGTCGCTAGCCCGTTAAAGGCCCACGTGG
TACTTCACAAGGCTGAAAGCCCAGCTTCTGTGAA---CTCCCCGCTGAGACGTCCAACACCCACCGCCGGTCACGAATT-
---------GGCGGCGGCGGCGGCGACACGGCAAGATGCTATCCCGCGCCCGGCGCCTCCACCCCGCTCTCCGCTGCCTC
CTACGTGCAACCGCTGCACACTCGTCACCTCACCCTCCTCCGACGCAACACATCGTAGCTGCCTCCCAAATCCCTAAACC
CTTCCCCCTCTTGCGCCGCCACCTCTCGTCCCCACCGCCGCCGCCGCCGTCGCCGGTGTCTTCCCCTCCGGCGGTGGTAT
CTTCTGACCTCCCAGCCGTCTGTACCAATGGCAAGTGCCCGGGCTGCGGCATCGCCATGCAGTCCGCCGACCCGGCCCTC
CCTGGCTTCTTCAACCTCCCATCCCCCAAGTCTCCCGACTACCGCGCGCGCCTCGCGCCCGTCACCGCCGACGACACCGG
CATCTCGGCCTCTCTGAAGAGCGGGCTCCTCCAGGAGGGCCAAGAGAAGTCACGGGAGGGCCAGGCGGTGGCGGTGGTGG
CAT------CGGAGGCGGAGGCCGAGAAGAAGAGCAAGGTGGTGGTGTGTGCTCGGTGCCACTCGCTGCGCCACTACGGC
CACGTCAAGCGCCCCGACGCCGAGGTCCTGCTCCCGGACTTCGACTTCGTGGCCGCCGTCGGCCCGCGCCTCGCGTCGCC
CTCGGGGGCCAGGTCGCTGGTGCTGCTCCTCGCGGACGCGTCGGACTTCGACGGATCCTTCCCACGCGCCGTGGCGCGCC
TGGTCGCCGTCACCAGCGAGGCCCACCACGCGGACTGGAAGCATGGTGCGCCGTCTAACCTCCCCCGCGCAGTGCTCGTG
GTCACCAAGCTCGACCTGCTCCCGACGCCGTCGCTTTCCCCCGACGACGTGCACGCGTGGGCGCAGGCCCGCGCGCGCGC
CGGTGCTGGCGCGGACTTGCAGCTTGCCGGCGTTCACCTTGTCAGCGCCGCGCGTGGGTGGGGGGTGCGCGACCTGCTCA
ACCACGTGCGCGAGCTCGCAGGGGCGCGCGGAAAGGTCTGGGCTGTTGGCGCGCGGAATGTGGGCAAGTCGACGCTGCTC
AACGCCATTGCTCGGTGCTCTGGGGCAGAGAGCGGGCAGACCTTGACAGAGGCGCCTGTCCCGGGGACAACCCTCGGGGT
GATCCGGGTGGACGGAGTTCTTGGTGCTCAGGCGAAGCTGTTTGATACTCCGGGCTTGCTTCATGGACATCAGCTCACGT
CGAGACTTACACCCGAGGAGCAGAAGCTTGTTCAAGTGAGGAAGGAGATGCGACCCAGAACATACAGAATAAAGGTCTCA
TTCCGTCCATATTATGCACATTTTGTCAGTGAATTTTGTGAGTAGGTGCTATGGGCATAAATTTTCTGCTTGTTTCCTCG
TATCCTTGGACGCCCACATTTCTTGCTTGTTCTATTATGTGCTACATAG----ATCTGCTTTTCATTAAGCAGTTGTGAT
TATGTGA------------------------------GGGGTAATTACTTCACCCTCTAAACAGTAACCATACTAATGTT
AGTCTGAAACTGAAGTTGACAAATGTGTGATGATATACTGGATTGGGAAATTGACACCCTGAGTGTGCTTAGAAAGTTTC
AGTTCTTAGACCTTTGACTATATATATCACATGTCTGGTTCAATCCGAAATAACATGAATAGTCTTTTGATAAGAGTTAT
TTGTGTGACCGGATTCT-TAGTTCTAATTCGTTTTGTTCATAACCTTTTCAGGCAGGGCAGTCCATACATATAGGAGGAC
TGGCACGCCTGGATGTGGAAGACTTGACTGTAGGATCAATCTATGTTACGGTTTGGGCATCACCACTTGTGCCACTTCAC
ATGGGGAAGACCGAAAATGCAGAGTCTATGATGAAAGATCACTTTGGTTTGCAACTGCAGGTA---TCTATCTTATCCTT
AAAAAA-GCGTTGTTTTT-TCCTAATTCATTTACATCATAAAATAACTTGCTGCTTGGTGTGATATGTGCAGCCTCCTAT
AGGCCAGAAACGAGTGAAGGAGCTTGGGAAATGGGTGAGGAAACAATTCAAAGTTTCTGGAAATAGTTGGGATGCAAATA
CTATGGATATAGCCATTTCAGGTCTTGGCTGGTACGGAATCGGGCTGAAAGGAGAGGCAGTGTTAGGGTTATGGACATAC
GATGGTGTTGATGTTGTCCCCAGGAGCTCCCTTGTCCATGAGAGGGCGTCAATTTTTGAGGAAACGGGATTCTCAGTTTC
AAAAGTCGTCTCACGGGCAGATAGCATGACGAATAAGCTGAAAGGCAATAAGAAAACAAACAAGAAGGAGATGAAAGCCA
GTTCACATTCTTCTGAAGTACCAGAATCTTCAGAACCTGCTACGGTCATAGATGCTTGAGTGTTTCATTCCATTCTGTGA
TACTAGTTTCAGTTATATAATCATATCTTATAAACTGTCGACTGAGGTTTGAAACACATAGAAGCATAGTAC--------
--------------------------------------------------------------------------------
-------------------------------------AATTTAAGCTTGCTCAAGAGGGGTATGGCTGTTCATGGAAGAT
TTTTGTGGGAGCATGCGCGTCATTTGGACTTGCTGTTGACTGGTACTCCCTCTGTAAAGAAATATAAGAGTGTTTAGAGC
ACTATTGTTGTGATCTAAACGCTCTTATATTTCTTTACGGAGGGAGTAATTATAACCAAATATCAGTCAAGTGAATCTTT
GTTAGTATGCTTGACTCATAAAAACAGCAAGAGAATGCCTCTCATGGTCTGTTCTCTCTTACCTTGTTTCAGCATCCATG
TATCTAACGTTTTGTGTTACTACGTCAAACATGCAGAATTGCGATAGTCAGTTTTTACATCTGAATCATGTGACGAATAT
ATTGCGCATAAGTTATATAACTTCTGTGTTGGAATTTTGAGACAGAAATCTACGGATT-CACAGCTCATTTATCTATCAA
AGAAGATTGCCAGAGACTTGTAAATCCCGTTGCACCCT----TCACACAGTAACAGCTCTTGTTTTGCCAAAGAACATCT
CACTGAATCCTTTTTCTGCTTCAGCTTGCCTTTTGCTGGACTGGTTATGTAAGGTTTTTGTTTACATTT-CATTGACTGT
GACCTTCGTTTCTTGAAATTGTACCATTGTTATGTACTACTAATGCTACCAAAAACACAACATGATGTTCCTTCTGCATA
AAAACTG----GAGAGGTTTGAAGAAATCTGCATCTGTGTACAAATGGTCTCACAGAAGCAGACACCGGGTTGCTGTCAA
TTGACAAGTTTTCTGGATGATTAAACAACAGCATGTGAACATCTCTGAAGCCAAAATTTTCAATTTTTTT------TGTT
GGTAGCTTGCCAAAGCATCTCTGAAGCCTGAAGGTGTTTTTTAACATTATTATTTTTTCGTTCTCGTTGAGAAGATGCAT
>chr5B_1
TCAGAGGTTCAATTTTCCTTTTTGACGAAGTCACATGCAGTCATATTTGGGCACAAGCTTTGCACATAACCGTGTGCAGA
ATTCGGGTCCTCTATAAAAGTTGAGACTGGCCAAGCAGGTGGAAACAAAACTGAAGATTATATCTTCTAGTG-------A
GGGAACTACTTGTCGCCAATGAATCAAGCCTGGAATGATAATTCCAGCACTAGAAAACCACTGATGATAATTTCCAGTAC
TAGACAAACACGATAAAGAATTTATACCAAACAGGCCAAATGGGGGATATGAATCTACACCATATC--------------
-TATCTCTCGCTGCGATGCAGGGATAACCTAATTGAAAAATACGTAG------------ATCTATGATTTTTCAATCCGT
TGAATATAACAACC----CTGAGCTACCTCGGATGAGAACACATCATATTGTAATTTCACAAAGAGCAAA----------
-----------GCAATCTGATACTACTAAGTAAGATCTAAGCCGATGATCCCGATTCCTCCAGCTCCACTGCAATTGACT
CAGAGAACAATCGACTAGTGCAAGCAAGGGAGGGGGCGGAGAGCGTACGTGGTGGCGGTGGACTCCTCCTCGAGCCAGGT
CTTGATGTGGCGAATGTTGCGGCGGAAGACGGCGGACGACTGCTTCACGTCCTTCCGCAGCAGCATCACCGCCGCGCCCA
CGCCCACCACCGTCAGGATCAAGTTGGTCAACGCCATCGCCACACAACAACTCCTCTGTAGAACCCTAGCGCGAGGCGTG
GATCGTCGCCGGAGTTTGGGGCGAGAAAGGGCCTGCTGACGGCGTCGGAGCAGAGAGA-----------------TGAGG
TTTTGAGATATGGGCTTGCCTGCTCGGAATAATAAGATGGGGCCTGCGCGGTGTTGCTGGCCCGTTAAAGGCCCACATGC
TACCTCACAAGGCTGAAAGCCCAGCTTCTGTTAACTCCTCCCCGCTGAGACGTCCAACACCCACCGCCGGTCACGAATT-
---------GGCGGCGGCGGCGGCGACACGGCAAGATGCTATCCCGCGCCCGGCGCCTCCACCCCGCCATCCGCTGCCTC
CTCCGTGCAACCGCTGCACCCTCGTCTCCTCACCCTCTTCCCACACAACACATCCTAACTGGCTCCCAAATCCCTAAACC
CTTCCCCCTCCTGCGCCGCCACCTCTCGTCCCCACCGG------------CGCCGGTGTCTTCCCCTCCGGCGGTGGTGT
CTTCTGACCTCCCAGCCGTCTGTACCAATGGCAAGTGCCCGGGTTGCGGCATCGCCATGCAGTCCGCCGACCCGGCCCTC
CCCGGCTTCTTCAACCTCCCATCCCCCAAGTCTCCCGACTACCGCGCGCGCCTCGCGCCCGTCACCGCCGACGACACCGG
CATCTCGGCCTCCCTGAAAAGCGGGCTCCTCCAGGAGGGCCAAGAGAACTCACGGGAGGGCGGGGCGGTCGCGGTGGTGG
CGGCGGCAGCGGAGGCGGAGGCCGAGAAGAAGAGCAAGGTGGTGGTGTGTGCTCGGTGCCACTCGCTGCGCCACTACGGC
CACGTCAAGCGCCCCGACGCCGAGGTCCTGCTCCCGGACTTCGACTTCGTGGCCGCCGTCGGCCCGCGCCTCGCGTCGCC
CTCGGGGGCCAGGTCGCTGGTGCTGCTCCTCGCGGACGCGTCGGACTTCGACGGCTCCTTTCCGCGCGCCGTGGCGCGCC
TGGTCGCCGTCACCAGCGAGGCCCACCACGCGGACTGGAAGCGTGGTGCGCCGTCTAACCTCCCCCGCGCAGTGCTCGTG
GTCACCAAGCTCGACTTGCTCCCGACGCCGTCGCTTTCCCCCGACGACGTGCACGCGTGGGCGCAGGCCCGCGCGCGCGC
CGGTGCTGGCGCGGACCTGCAGCTGGCCGGCGTTCACCTTGTCAGCGCGGCGCGAGGGTGGGGGGTGCGCGACCTGCTGA
ACCACGTGCGCGAGCTCGCCGGGGCGCGCGGCAAGGTCTGGGCTGTTGGCGCGCGGAATGTGGGCAAATCGACGCTGCTG
AATGCCATTGCTCGGTGCTCTGGGGCAGAGAGCGGGCAAACCTTGACAGAGGCGCCTGTTCCGGGAACAACCCTCGGGGT
GATCCGGGTGGATGGCGTTCTTGGTGCTCAGGCCAAGCTGTTTGATACTCCGGGCCTGCTTCATGGACACCAGCTGACGT
CCAGACTTACACCCGAGGAGCAGAAGCTTGTTCAAGTGAGGAAGGAGATGCGACCCAGAACATACAGAATAAAGGTCTCA
TTCCGTCCATCTTATGCACATTTTGTCAGTGAATTTTGTGATTAGGTGATATGGGGACAGCTTCGCTGCTTGTTTCCTCA
TACCCTTGGTCGCCCGTATTT-------------------------------------CTTTTCATTAAGCAATTGTGAA
TGGTTGGGAG---------------------------GGGGTAGTTAATTCACCCTTTAAACAGTAACCATATTT-TGTT
AGTCTGAAACTGAAGTTGACAAATGTGTGATGATATACTGGATTGGGGAATTAACACCCTGAGTGTGCTTAGAAAG-TTC
AGTTCTTAGACTTTTGACTATATATATCACATGTCTGCTTCAATCCGAAATGACATGAATAGTCTTTCGATAAGAATCAC
CTGTGTGACAGGTTCTTATATTTCTAATTCGTTTTGTTTACAACCTTTTCAGGCAGGGCAGTCCATACATATAGGAGGGC
TAGTGCGCCTGGATGTGGAAGACTTGACTGTAGGATCAATCTATGTTACAGTTTGGGCATCACCACTTGTGCCACTTCAC
ATGGGGAAGACCGAAAATGCAGAGTCTATGATGAAAGATCACTTTGGCTTACAACTGCAGGTATCTTCTATCTCATCCTT
AAAAAG-ATGTTGTTTTTATCCTAATTCATGTACATCATAAAATAACTTGCTGCTTGGTGTGATATGTGCAGCCCCCTAT
AGGCCAGAAACGAGTGAAAGAGCTTGGGAAATGGGTGAGGAAACAATTCAAAGTTTCTGGAAATAGTTGGGATGCAAATA
CTATGGATATAGCCATTTCAGGTCTTGGCTGGTACGGAATTGGGCTGAAAGGAGAGGCAGTATTAGGGTTATGGACATAT
GATGGTGTTGATGTTGTCCCCAGGAGCTCCCTTGTCCATGAGAGGGCATCGATTTTTGAGGAAACAGGATTCTCAGTTTC
AAAAGTCGTCTCACGGGCAGATAGCATGACGAATAAGCTGAAAGGCAATAAGAAAACAAGCAAGAAGGAGATGAAAGCCG
GTTCACATTCTTCTGAAGTATCGGAACTTTCAGAACTTGCTACGGTCATAGATGCTTGAGTGTTTCATTCCATTCTGTGA
TACGAGTTTCAGTTATATAATCATATCTTATAAACTGTTGGCTGAGGTTTGAACCACATAGAAGCATAGTACTCCCTCCG
TCCGGAAATACTTGTCATCAAAATGGATAAAAAGGGATGGATCTAGACGTATTTTAGTTCTAGATACATCTCTTTTTATC
TATTTTGATGACAAGTATTTTTGGACGGAGGGAGTACAATTTAAGCTTGCTTG-GAGGGGTATGGTTGTTCATGGAAGAT
TTTTGTGGGAGCATGGGTGTCATTTGGACTTGCTGTTGACTGGTA-----------------------------------
------------------------------------------------ATAATAACCAAATATCAGTCAAGTGAATCTTT
GTTAGTATGCTTGACTCCTTAAAACAGCAAGAGAATGCCTCTCATGGTCTGTTCTCTCTTACCTTGTTTCAGCATCCATG
TATCTAACGTTTTGTGTTACTACGTCAAACATGCAGAATTGCGATAGTCAGTTTTTACATCTGAATCATGTGGCGAATAT
ATTGCGCTTAAGTTATATAACTTCTGTGTTGGAATTTTGAGACAGAAATCTACGGATT-CACAGCTCATTTATCTATCAA
AGAAGATTGCCAGAGACTTGTAAATCCCGTTGCACCCT----TCACACAGTAACAGCTCTCATTTTGCCAAAGAACATCT
CACTGAATCCTTTTGCTGCTTCGGCTTGCTTTTTGCTGGACTAGTTATGTAAGGTTTTTGTCTACATTTGCATTGACTGT
GACCTTCGTTTCTTGAAATGGTACCATTCTTATGTACTACTAATGCTACCAAAAACACAACATGATGTTCCTTTTGCATA
AAAACTG----GAGAGGTTTCAAGAAATGTGCATGTGTGTACAAATGGTCTCACAGAAGCAGGCACAGGGTTGCTGTCAA
TTGACAAGTTTTCTGGATGATTAAAGAACAGCATGTGAACATCTGTGAAGCCGAAAATTTCAAAAAAAAAAAAATCTGTT
GGTAGCTTACCAAAGCATCTCTGAAGCCTCAAGGCGTTTTTTTAAC--ATTATTTCTTCGTTCTCGTTGAGAAGATGCAT
>chr5A_62
-------------------------------------------------------------GCACGCAGCCGTGTGCAGA
ATTCAGGTTCTCTATAAAAGCTGAGACTGGCCAAGCAGGTGGAAACAAAAGTGAAGATTATATCTTCTAGTGAGGGATCA
GGGAACTACTTGTCGCCAATGAATCAAGCATGGAATGATAATTCCAGCACTAGAAAATCACGGATGATAATTTCCAGCAC
TAGACAAACACGATACAGAATTTATGCCAAAAAGGCGAAATCGGGGATATGAATCTACACCTATAGCACTTATAAGCGCC
ATATCTCTTACCGCGATGCAGGAATAACCTCGGCGTTTCTTCATTGAATAGGTAGATCTATATATGATTTGTCAATTCGT
TGAATATAACAAACAATGCTGAGCTACCATGGATAAGAAGACATCATACTGCAATTTCAGAAAAGAGCAAAGCAATCAGA
CACCAGACAGTGC-----------------TAAGATCTGAGCCGATGATTCCGATCCCTCCAGTCCCACCGCAATTGACT
CAACG-ACAATCGACTAATACACGCAAGGGAGGGGGTGGAGAGCGTACGTGGTGGCGGCGGACTCCTCCTCGAGCCAGGT
CTTGATGTGGCGAATGTTGCGGCGGAAGACGGCGGACGACTGCTTCACGTCCTTCCGCAGCAGCATCACCGCCGCGCCCA
CGCCCACCACCGTCAGGATTAAGTTAGTCAACGCCATCGCCT-----------CTCTGTAGAACCCTAGCTCGTGGTGTG
GATCGTCGCCGGAGTTTGGGGCGAGAAAGGGCCCGCTGACGGCGTCGGAGCAGAGAGATGTTCGCTGCGTCGTGCTGAGG
CGTTGAGATATGGGCTTCCCTGCTGGACATGATAA----GGTCCTGTGTGGTGTTGATGGCCCGTTAAAGGCCCAGGTGC
TTCTTCACGAGGCCGAAAGCCCAGCTTCTGTTAACTCTTCCCCGCTGGGACGTCCAACACCCACCGCCGGTCACGACTCA
CGAATTGGCGGCGGCGGCGGCGGCGACACGGCAAGATGCTGTCCCGCGCCCGGCGCCTCCACCCCGCTCTCCGCTGCCTC
CTCCGTGCAAGCGCTGCGCACTCGTCCCCTCACCCTCCTCCGACGCAACACATCCTAGCTGCCTCCCAAATCCCTAAACC
CTTCCCCCTCCTGCGCCGCCACCTCTCGTCCCCACCGC------------CGCCGGTGTCTTCCCCTCCGGCTGTGGTGT
CTTCTGACCTCCCAGCAGTCAGTACCAATGGCAAGTGCCCGGGCTGCGGCATCGCCATGCAGTCTGCCGACCCGGCCCTC
CCTGGCTTCTTCAACCTCCCATCCCCCAAGTCTCCCGACTACCGCGCGCGCCTCGCGCCCGTCACCGCCGACGACACCGG
CATCTCGGCCTCTCTGAAAAGCGAGCTCCTCCAGGAGGGCCAAGAAAACTCACGGGAGGGCGGGGCGGTGGCGGTGGCGG
TGGTGGCCGCGGAGGCGGAGGCCGAGAAGAAGAGCAAGGTGGTGCTGTGTGCTCGGTGCCACTCGCTGCGCCACTACGGC
CACGTCAAGCGCCCCGACGCCGAGGTCCTGCTCCCGGACTTCGACTTCGTGGCCGCCGTCGGCCCGCGCCTCGCGTCGCC
CTCGGGGGCCAGGTCGCTGGTGCTGCTCCTCGCAGACGCGTCGGACTTCGACGGCTCCTTCCCGCGCGCCGTGGCGCGCC
TGGTCGCCGTCACCAGCGAGGCCCACCACGCGGACTGGAAGCGCGGCGCGCCGTCTAACCTCCCCCGCGCGGTGCTCGTG
GTCACCAAGCTCGACCTGCTCCCGACGCCGTCGCTTTCGCCCGACGACGTGCACGCGTGGGCGCAGGCCCGCGCGCGCGC
CGGTGCTGGCGCCGACCTGCAGCTTGCCGGCGTTCACCTTGTCAGCGCGGCGCGAGGGTGGGGGGTGCGCGACCTGCTCA
ACCACGTGCGCGAGGTCGCCGGGGCGCGCGGCAAGGTCTGGGCTGTTGGCGCGCGGAATGTGGGCAAATCGACGCTGCTC
AACGCCATTGCTCGGTGCTCTGGGGCAGAGAGCGGGCAAACCTTGACAGAGGCGCCTGTTCCGGGAACAACCCTCGGGGT
GATCCGGGTGGACGGCGTTCTTGGTGCTCAGGCGAAGCTGTTTGATACTCCGGGCTTGCTTCATGGACACCAGCTGACGT
CCAGACTTACGCCCGAGGAGCTGAAACTTGTTCAAGTGAGGAAGGAGATGCGACCCAGAACATACAGAATAAAGGTCTCA
TTCGTTCCATCTTATGCACATTTTGTCAGTTAATTTTGTGATTAGGTGATATGTGGACAGATTTTGTGCTTGTCTCCTCA
TACCCTTGGTCGCCTGTATTTCTTGCTTGTTCTATTATGTGCTACATAGCTACATCTGCTTTTCATTTAGCAATTGTGAT
TATGTGAGGGACTGAAGGGAATGGTCGGGACTTGGGAGGGGTCGTTATTTCACCCTCTAAGCAGTAACCATAGT-ATGTT
TTTCTGAAACTGAAGTTGACAAATGCGTGTATTG----------GGGAAATTGACACCCTGAGTGTGCTTAGAAAGTTTC
AGTTCTTAGACCTTTGACTGTATATATCACATTTCTGCTTCAATCCGAAATGACATGAATAGTCTTTTGATAAGAATCAC
TTGTGTGACAGGATTCT-TATTTCTAATTCGTTTTGTTCACAACATTTTCAGGCAGGGCAGTCAATACATATAGGAGGAC
TGGTGCGCCTGGATGTGGAAGACTTGACTGTAGGATCAATCTATGTTACGGTTTGGGCATCACCACTTGTGCCACTTCAC
ATGGGGAAGACCGAAAATGCGGAGTCTATGATGAAAGATCACTTTGGCTTGCAACTGCAGGTA---TCTATCTTATCCTT
AAAAAAAATGTTGTTTTTATCCTAATTCATTTACATCATAAAATAACTTGCTGCTTGGTGTGATATGTGCAGCCTCCTAT
AGGCCAGAAACGAGTGAAAGAGCTTGGGAAATGGGTGAGGAAACAATTCAAAGTTTCTGGAAATAGTTGGGATGCAAATA
CTATGGATATAGCCATTTCAGGTCTTGGCTGGTATGGAATCGGGCTGAAAGGAGAGGCAGTATTAGGGTTATGGACATAC
GATGGTGTTGATGTTGTCCCCAGGAGCTCCCTTGTCCATGAGAGGGCGTCGATTTTTGAGGAAGCAGGATTCTCAGTTTC
AAAAGTCGTCTCGCGGGCAGATAGCATGACAAATAAGCTGAAAGGCAATAAAAAAACAAACAAGAAGGAGATGAAAGGCA
TTTTGCAATCTTCTGAAGTACCAGAACCTTCAGAACCTGCTACGGTCATAGATGCTTGAGTGTTCCATTCCATTCTGTGA
TACGAGTTTCATTTAGATAATCATATCTTATAAACTGCCGGCTGAGGTTTGAAACACATAGAAGCATAGTAC--------
--------------------------------------------------------------------------------
-------------------------------------AATTTAAGCTTGCTCG-GAGGGGGATTGTTGTTCACTGAAGAT
TTTTGTGGGAGCATGGGTGTCATTTGGGCTTGCTGTTGACTGGTA-----------------------------------
------------------------------------------------ATAATAGCAAAATATCAGTCAAATGAATGTTT
GCTGGTATGCTTGGCTCATAAGAACAGTAAGAGAATGCCTCTCA--------------------TGTTTCAGCATCCATG
TACCTAACGTTTTGTGTTACTATGTCAAACATGCAGAATTGTTATAGTCAGTTTTTACATCTGAATCATGTGTTTGCA--
----------------------------TTGGAATTTTGAGATAGAATCTATGGATTTCCACAGATCGTTTATCTATC--
-GAAGGTTGCCAGAGACTTGTAAATCCCGTCTACACCCTTCATCACACAATAACAA--CTTGTTTTGCCAAAGAACATCT
TACTGAATCCTTTTGCTGCTTCAGCTTGCCTTTTGCTGGACTGGTTATGTATGGTTATTGTCTACATTTTCATTCAGTGT
GACATT-GTTTCTTGAAATTGCACCATTGTTAATGTACCTC--TGCTACCAAAAACACAACATAATGTTCTCTCTTAATA
AATTAAAAACAGAGATGTTTCAAGAAATCTTCATGCGTGTAC-AATGGTCTGATAGAAGCAGACACAGGATTGCTGTCAA
TCGACAAGTTTTCTGGATGATAAAAGAGCAGCATGTGAGCATCGCTGAAGCC----------------------------
--------------------------------------------------------------------------------
>SNPs
-----------S-----S------S-S-------------S-------SS------S-------------------S---
--------------S-----------------------------------------------------------------
-----------------------------------------------------------S--------------------
----S------------S------------S-----------SS--------------S------------------S--
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------S----S----
----------------------------S--------------S-------S--S---S--------------------S
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------S---------------------------S-------------------------
----------S---------------------------SSSSSSSSSSSS----------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------------------------S------------SS-----------------
-SS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S--------S----------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------S-------------------------------S-----S-------------------------
-------------------S-----------S-----------------------------------S------------
--------------------------------------S--------------------S-----S--------------
---------------S-----------------------------------------------------S-----S----
-S------------------------------------------------------------------------------
----------S------------------------------S------S------S-S-S-------------------S
--S------S-----SS-------------------------------------------------------S-------
-------------------------------------------S---S------------------------S-S-----
--------------------------------------------------------------------------------
-------------------------------------S-------------S-----------------------S-S-S
---------S----------S-------------------S---------------------------------------
---SS---------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------SS-----------------------------------------------------------------------
------------------S-------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------S--------------S--------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---S------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------SS-----------S--------------
---------------S-S---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------S-------------S-------------------------------S-------------
-------------------------S--------------------------S---S------SSSSSSS----------
--------S--------------------S----S-------S-SSSS-------S------------------------
>forward_871
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---------------------------------------------------AGAGAGATGTTCGCTGCGTT---------
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>reverse_2400
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-------------------------------------------------------------------------------G
TATCCTTGGACGCCCACAT-------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_2242
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATGGACATCAGCTCACGT
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_4175
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCTGCTTCAGCTTGCCTTTTG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
