>input_sequence_34786
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---------ATGCCCCTCCGTCCCCCAAGCAGCCCCCGGCTCAAGGATCTCCCGACTCCACACGGCGGTGCAGCGCGGTT
GGTCCATGGAGCATCCCGTGCCCACGAGCTCCCCCGGAGCCGGAGCCGGAGACCCCGCGACCCGCCGTCCCCTCCCCCGT
ATGGCC-CCCGTCCCCCGCTCGCTCCATCATCCCCAGTTCTTTTACACTTCAGGGCAATCTATTCGAAATCGGTCCGTCG
TATTTGCCGACAGGTCGACCGGCGGGGATTGTAGCGA-------GGGAGTGTTCATGTAGAAATTCCTCTGCTTTTTTCT
TTTTTGA---------GGAGGAAATTCCTCTGTATTTTAGTTGGGTTCATTCATTCATACCGCGAGTTACCGGAACCTTT
TTACTTAGCCTCTTGGAACTAGTACAGGTTTAGGAAGTTCCTCTGTATGTTAGTCGGATGGATTCATTCATGTCGCGAGT
TGCCGGAATATTTTTACCTAGCCTCTGGGAACTACAGGTTTGGGAGGGAGTGTTCTGCATTTTACTATCCATTCA-TTTG
CTGAGACAAGTTGTTTTTTTGAATTCAGGCACGAGGAGGAGGAGCATCTTGCTGAACCTGG---ATCATCATCTGCACAA
ACTCTGCAAGCACCGTCCTTGAATGAGTCGCCCAGCGCTTCGTCGGTGTGGGAGGAATTGCGTGTCGCTGTCGCTTCCTC
CGCCTTTTCGCAGTCGGAGGCAGTAGCT---------------------CCTGACTCGCCTATTTTTTCCCGGCTACCGC
GTGACTGGGGGCTCCAATTTTACATCAGGGTGGATCTTTCAGGATCTTTCCACACATATCCTCGTTTGGGTGGGCCATTC
AAGAGCTTAGAGGAAGCCGACAGTGCTATTGATCGCCATCTGCACGACCGCCGGGTCACCAAAATGTAAG-TTTTTCAAC
TTCGT-----------TCTAGATTT-------------------------------------------------------
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----------------------------------------------------------------------TCACTGAGTT
-GGGATAGGGATGCCTTTTTTT-AGGCACAACTAAGTTTATTGATTCAGAGCTTATAGGCATGTAAACAATCCATTTGTG
CTTTTTTGGGGGGGTACCATGAGTTATGT--TAAAGGTAACATGGGAGCTGTTTGATCCCCTATT----CAAGAAAGTTC
CATGGAAACTAGTTTTATTGATAACATTGGCAGAGTATTTACACACATAGTAGACTTGTTT---TTTTATTCAGTACTGA
GAAAGTGCAACATACCAACCAATGCTCTGATCTAAACTAGGTGCCCGGAGCAAGGCAGCGTTTCTCGACTGGATAAGGTC
GTACAACAATGTCTTTACTGGCCCGATGGCAGAAGGAAGAAGCGTTCAAAATCTCATGTGATTGAGCAAAGTCATAATCG
AATGTGCCTATTGGCTCAAGCTCTAGTAGACAAGTATAACGAGAATCACAATCTTTTGGGGGTCTGCTCACTATCCCTCT
CTACTTCCTTTTTTCTGTC--------CTTCTACCAGGATTGCACTATGTCTTTTTGCTCATGTGAGAATTGCTGATCTG
AGATATGCTTCTTCTTTTAGGATCTTGCACATGAGTTCAAAGACGTTGTGCAATATCAATCAATTTGCGAGAACCGTGTG
TGGTACTATCATCTCAATATCACTACAAGGGCTAAAGGAGCTGATGGTTTCTCCCATGGCATCGATGATCTATTCTTCAC
GGAAGTCAAACGTGTGCGACAGGGACAACATGAGGAATTGGTGGTCAGCTGTTTCTGCATGCTCAAACCGACTGATAACG
GTATTGTATATATACTCATATCTGAAACTAAGAATTGCTTAGTGCAGTTTGTGGGTGGTTAAACTTGGATTTGCGTTTAT
AACATCTCAAACTGGTTCATGCGCCCTTGCTTGTACTTGTTTGTTACTTGCCAATTAACTCTCTCCTTGTGTTCATAAAT
AAAGGTTGCTGCTATGGCTGTACCAACAATGGATCTCCTGATATGAAGCACCCCAGCAGCACTGATAAATACATTGCTGG
TCACTTGAACGGATATTTGCCATTTGGATGCCGTAGGGAGTTTAGTGACTCTGATGATGAGGTATGATATGGTTTATTTC
CTGGCGAGCCTAGCATTATTTTTCTTGCTCCA-TTGCTAACTACATGTCC---------CCTTTTACAGGAGGA------
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---------------------AGCTGAGGCTAAGCTAAGAGATATGTATGAGGTACGGCATGTCTTGTGCTGCATTCTAC
CATTTGTAGCATCAACTCTGGTTC--------------------------------------------------------
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--------------------TATATACTTATCACAATTTGCCTGCTCGTGTA-------TCTTCAGGGCCTTGATGAGCC
AGACTTTCTGGAGAAACTCTTCACATTTCCCACTTATGTAACTCTGAGGAAAGACACGAAGGGAACCTGA----------
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>chr2A_1_TraesCS2A01G545200
CGTCATCTCATTGACTTTTTTTTATAAATGAGAAGTTTTTTATTCCATATGGAAAATACTTATAAGGAGTAGGTATTACT
ACGGTAAATATCACTCTACCATGGATGTTGGTTCAGGACCCAAAAGGCTTTAGAAATTTTGAGAAGAAATATATGTCGAC
AAATGTAGTCTTTATGTTATATAATCCTGCTGGAATCGATGCAATTTGTGAAAATGTATTTATTCCTTTTATTAATTCCT
TGTGATTTCCTATAACAACGGAGTCAAGGTGTTTTGATGTCCCAACACTAAAAATATTGTGCATACTTATGTCGGGCTTT
GGATGATGAGCATCCTATGAGGTTTCTTTCAACTTGATGTTGAATTACATTTACTTGTTGAGAATTTAATTTCTTCTGCT
TCCGCGGAAGCATATGAGAAGTTACATCTCGTGTGGTCAGATTTCTCCCCCTCTTGTTCTCATTTGGGGAGAAGAATGGT
CTATTAGGTACCTCCACTCTTTCTGGTACTTCACTGCAGATATATAGAATTTAGTGACATAGTTTTCACCAGTAAATGTA
TGCAGCATTTTGCAATGTG---------------TTATATGAACTTCTAATTCAGATTCTTAAGTACGTGTCAATGAC--
------------------------TTTTTTTTCTGCATTCTTTGTGGTACCATTCTCCATCTAACGTAAGTTCAAAAAAA
AAATCTCCCTCTAACGTCAAAAAATGTCACATTGCTAATGCCATTAGTATGCGGGCTATGATGTTTT------TATAATT
GGCAGATAAACTTTTATT-------------------------------------------------TCTCACATAGATT
CCTAATTTTCTATTTCTATTTCTGAAAAGAAAAGGATTCATAATTATCTACGAGGGCTCATTGTTGTACGCTGGAGGCAA
AGAAAAAAGCTATTCAGCTCTGCCAAGCAGGCCATCCATGGGCCCTTAGCCCGAGAACGGACGGGCCGCTTCCGTAACCA
AAGCGCGGTCGTCGTCTTCTTCCTCGCCTCCGC-CCCCCAAGCGGAACGGCGG---------------------------
-----CCCCATGCCCCTCCGTCCCCCAAGCAGCCCCCGGCTCAAGGATCTCCCGACTCCACACGGCGGTGCAGCGCGGTT
GGTCCATGGAGCATCCCGTGCCCACGAGCTCCCCCGGAGCCGGAGCCGGAGACCCCGCGACCCGCCGTCCCCTCCCCCGT
ATGGCC-CCCGTCCCCCGCTCGCTCCATCATCCCCAGTTCTTTTACACTTCAGGGCAATCTATTCGAAATCGGTCCGTCG
TATTTGCCGACAGGTCGACCGGCGGGGATTGTAGCGA-------GGGAGTGTTCATGTAGAAATTCCTCTGCTTTTTTCT
TTTTTGA---------GGAGGAAATTCCTCTGTATTTTAGTTGGGTTCATTCATTCATACCGCGAGTTACCGGAACCTTT
TTACTTAGCCTCTTGGAACTAGTACAGGTTTAGGAAGTTCCTCTGTATGTTAGTCGGATGGATTCATTCATGTCGCGAGT
TGCCGGAATATTTTTACCTAGCCTCTGGGAACTACAGGTTTGGGAGGGAGTGTTCTGCATTTTACTATCCATTCA-TTTG
CTGAGACAAGTTGTTTTTTTGAATTCAGGCACGAGGAGGAGGAGCATCTTGCTGAACCTGG---ATCATCATCTGCACAA
ACTCTGCAAGCACCGTCCTTGAATGAGTCGCCCAGCGCTTCGTCGGTGTGGGAGGAATTGCGTGTCGCTGTCGCTTCCTC
CGCCTTTTCGCAGTCGGAGGCAGTAGCT---------------------CCTGACTCGCCTATTTTTTCCCGGCTACCGC
GTGACTGGGGGCTCCAATTTTACATCAGGGTGGATCTTTCAGGATCTTTCCACACATATCCTCGTTTGGGTGGGCCATTC
AAGAGCTTAGAGGAAGCCGACAGTGCTATTGATCGCCATCTGCACGACCGCCGGGTCACCAAAATGTAAG-TTTTTCAAC
TTCGT-----------TCTAGATTT-------------------------------------------------------
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----------------------------------------------------------------------TCACTGAGTT
-GGGATAGGGATGCCTTTTTTT-AGGCACAACTAAGTTTATTGATTCAGAGCTTATAGGCATGTAAACAATCCATTTGTG
CTTTTTTGGGGGGGTACCATGAGTTATGT--TAAAGGTAACATGGGAGCTGTTTGATCCCCTATT----CAAGAAAGTTC
CATGGAAACTAGTTTTATTGATAACATTGGCAGAGTATTTACACACATAGTAGACTTGTTT---TTTTATTCAGTACTGA
GAAAGTGCAACATACCAACCAATGCTCTGATCTAAACTAGGTGCCCGGAGCAAGGCAGCGTTTCTCGACTGGATAAGGTC
GTACAACAATGTCTTTACTGGCCCGATGGCAGAAGGAAGAAGCGTTCAAAATCTCATGTGATTGAGCAAAGTCATAATCG
AATGTGCCTATTGGCTCAAGCTCTAGTAGACAAGTATAACGAGAATCACAATCTTTTGGGGGTCTGCTCACTATCCCTCT
CTACTTCCTTTTTTCTGTC--------CTTCTACCAGGATTGCACTATGTCTTTTTGCTCATGTGAGAATTGCTGATCTG
AGATATGCTTCTTCTTTTAGGATCTTGCACATGAGTTCAAAGACGTTGTGCAATATCAATCAATTTGCGAGAACCGTGTG
TGGTACTATCATCTCAATATCACTACAAGGGCTAAAGGAGCTGATGGTTTCTCCCATGGCATCGATGATCTATTCTTCAC
GGAAGTCAAACGTGTGCGACAGGGACAACATGAGGAATTGGTGGTCAGCTGTTTCTGCATGCTCAAACCGACTGATAACG
GTATTGTATATATACTCATATCTGAAACTAAGAATTGCTTAGTGCAGTTTGTGGGTGGTTAAACTTGGATTTGCGTTTAT
AACATCTCAAACTGGTTCATGCGCCCTTGCTTGTACTTGTTTGTTACTTGCCAATTAACTCTCTCCTTGTGTTCATAAAT
AAAGGTTGCTGCTATGGCTGTACCAACAATGGATCTCCTGATATGAAGCACCCCAGCAGCACTGATAAATACATTGCTGG
TCACTTGAACGGATATTTGCCATTTGGATGCCGTAGGGAGTTTAGTGACTCTGATGATGAGGTATGATATGGTTTATTTC
CTGGCGAGCCTAGCATTATTTTTCTTGCTCCA-TTGCTAACTACATGTCC---------CCTTTTACAGGAGGA------
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---------------------AGCTGAGGCTAAGCTAAGAGATATGTATGAGGTACGGCATGTCTTGTGCTGCATTCTAC
CATTTGTAGCATCAACTCTGGTTC--------------------------------------------------------
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--------------------TATATACTTATCACAATTTGCCTGCTCGTGTA-------TCTTCAGGGCCTTGATGAGCC
AGACTTTCTGGAGAAACTCTTCACATTTCCCACTTATGTAACTCTGAGGAAAGACACGAAGGGAACCTGAGTTCAGAAGA
CTGGACTCAAGGGGCGTCGGAGTGAAACAGCATTGCCTGT----TTTAC---CTTGTGGTTCAGTTATAGTAATGTTGTA
AGGGCCCCTTCAATGTTTTAGAGTTTGAGGATGACCTAATTACAGCATGCTACAGTTAAATAAGCAA----TTTGTACAA
GTAGCTTGTGCTTGTCTTTTGTTTTACACAAATCTGTTTGCAAGGAGTTGTGAA----------------ACAGCTGTCA
AATTTGAAACACTCCTCAGATTCAGATGATCAGTCCTAGCTTTTACTACACTGGTGCATGCTCAAATCGAGATAATTTCT
GCCGCATTACACCTGTTT---TACCCTACTGAACTAACCTAGCAACTTGTTTTAGAGATCCATCTC--AAGCTTAGAGAT
CATT--CCAAGAATATCTAATCCTCGGTGTACATCCATCTTCAAGGTGTATATAAATAGGAACTTCTAGGGATCACAAAA
CAACAAAATAACGTGATTTAAGCATTTAGAGATCGCAGAAAATAGGTTATGATGCCATGAATGATGAATGTATGTACTGA
ATGTAGAAGAACACAAGGAATATAATGTGGAGACTAAGTACATATCTTGTCTGGTTTGTCAACAGCTGTTTACATTACAG
TTCAGAGAACAGAGATTATTGGCAAATACCAATGTTTTAAATAGTGGGCTATGAAAAATAGCAGCAGACCTCCAAATCAG
CTATAGCGGGCTATTTGTGAAGACGACCATTTAGCAGCACCCTGCTGAAAAGGCTATAGCGGGCTATAGCCGCTATTTAA
AACTATGGCAAGTACTCCCTCCACGGAGGGAGTAGAAATGACCAAAGCGGAGATGTCTGTTTCATTCCACGGAACTAACA
GCTAGATACAAGTAAGCAGATAGAAATCTCAAACTATGTGCTCAGCCGGTGCCAGGATCTTGAGATGCTTCTTCTTTCTG
AGCTCGTGGGGGACGGGACCAAAGACGCGGGTGCCAATCAGCTCACCCTTGTTGTTCACGATGA
>chr2D_92
--------------------------------------------------------------------------------
-----------CACTCTACCATGGATGTTGGTTCAGGGCCCAAGAGGCTTTAGCAATTTTGAGAAGAAATATATGTCGAC
AAATGTAGTATTTATGCTATATGATCATGGTGGAATCGATGAAATTTGTGAAAATGTATTTATTCCTT---TTAATTCCT
TGTGATTTTTACAACAAT-GGAGTCAAGGTGTTTTGATGTCCCAACACTAAAAATATTGTGCATACTTATGTCGGGCTTT
GGATGATGAGCATCCTATGAAATGTCTTTCAACTTGATGTTGAATTACATTTACTTGTTGAGTATCTAATTTCCTCTGTT
TCCGCGGAAGCATATGAGAAGTTACATCTTGCATGGTCAGATTTCTCCCCCTCTTGCTCTCATTTGAGGACAAGAGTGGT
TTATTAGGTACCTCCACTCTTTCTATCACTTTGCTGCAAATATATAAAATTTAGGACAC--GTTTTAATCAGTAAATATA
TGTGGCATATTTGCAATGTGTTGCAAATATATGATTCTATGAAATCCTAGTTCAGACTCTTAAGTACGTGATCATAAGGT
CTGAATGTCAATGCCATTTCTAATTTATTTTTTGGCATTTTTTGTGGTACTAATCTCCCTCTAATACCA-----------
------------------AAAAAAAATCATATTGCTAGTGCCATCAGCATATGGCCTATGAGTTTTTTTCGTATATGATT
GGCAGATAAATTGTTTTTTTCTCGCGCAAAAAAAAGATAAATTGTTTTTTAGTGTGATAAATTGTTGTCTCACATATATT
TTTAATTTTCTAT--------------------------------------GAGGGCCCACTGCTGTACGCTGGAGGCAA
AAAAAAAACCTACTCAGCTCTGCCAAGCAGGCCTTCCATGGGCCCTTAGCCCGAGAACGGACGGGCCCTT----------
-AGCGTCGTCGTCGTCTTCTTCCTCCCCCTTCTGCCCCCAAGCGGAACGGAAATCATCAAGACCTAATCCAATCCCTCCC
GGCGCCCCCATGCCCCTCCGTCCCCCAAGCAGCCCCCGGCTCAAGGACCTCCCGACTCAACCCGGCGGTGCAGCGCGGTT
GATCCATGGTGCAGCCCGTGCCCACGAGCTCCCCCGGAGC------CGGAGACCCCGCGACCCGCCGTCCCCTCCACCGT
ATGGCCACCCCTCCCTCGCTCGCTCCATCATCCCCAGTTCTTTTACATATCGGGGCGATCTATTCGAAATCAGTCTGTCG
TATTT--------GTCGACCGCCGGGGATTTTAGAAATCAGTCTGGGGGTGTTCGTCTAGAAATTCCTCTTTATT-----
-TTTCGA---------GGAAGAAATTCCTCTGCATTTTGGTTGGGTTCATTCATTCATGTCGAGAGTTCCCGGAACCTT-
---CTTAGCATCTAGGAACTACG---GGTTTGGGAGGTTCCTCTGTATGTTAGTCGGATGGATTCATTCATGTTGCGAGT
TCCCTGAATATTTCTACTTAGCCTCTGGGAACTGCAGGTTTGGGAGGGAGTGTTCTGTATTCTATCATCCATTCA-TTTT
CTGAGACAAGTTTTTTTTTTTAATTCAGGCACGAGGAGGAGGAGCATCTTGCTGAACCTGG---ATCATCATCTGCACAA
ACTCTGCAAGCACCGTCCTTGAATGAGTCGCTCGGCGCTTCGGC---GTCGGAGGAAACGTGTGTCACTGTCACTTCCTC
CGCCCTTTCGCAGTCAGAGGCGGTAGCCCAATACACAATAGTTCCTGCCCCTGGTTCACCTATTTTGTCCCGGCTACCGC
GTGACTGGGGGCTCCAATTCTACATCAGGGTGGATCTTTCAGGATCTTTCCACATATATCCTCATTTGGGTGGGCCATTC
AAGAGCTTACAGGAAGCCGACAATGCTATCGACCGCCATCTTCTTGATCGCCAGGTCACCAAAATGTAAAGTTTCTCGAC
TTCGTTCTAGATTTTCTCTGGTTCCTATCTCCCTTCTTTCGTGCACGCATACATGCAACCGATTGTATTTAAAACAGAGC
TACATACTTCTAGGTTGTAGGCCACAGAAGATAATCACATTTGAATA------TAATGGATGACCCTAAGCTGGACTACA
GAAAAGCTCACAAGTTTTGGTTGTAGGAAAATATCAGGCTGGATTACTTAGTTTCTGAAATTTCGTGGCCACTCAAAGTT
AACAGAGCTTCTTCTTGTTTTTACACTGCCAGTGAGAGAGTTGTTGGTAGTGCTTTATCTGTGAAGGTGGTTGCACGTTC
ATAGCTGAAAATTAGCAAAGTGCACTTCTGTACAATTGGTTAGCTTTGAGCCAGGCACACTCAAACAGTTCTGTTTCCTC
ATACTAAACAAGAATGGTGACAGCCAGCAAGTTAAGTCACGTTAACTAGTCAAAACAGTGTGGTAAAAGCTCACTGAGTT
GGGGATAGGGATGCCTTTCTTGCAGGCACAACTAAGTTTATTGATTCAGAGCTTATAGGCATGTAAACAATCCATTTTTG
CTTTTTTTT--GGGTACCATGAGTTATGT--TAAAGGTAACTTGGGAGCTGTTTGAT-CCCTATT----CAAGAAAGTTC
CATGGAAACTAGTTCACCTGATAACATTGGGAGGGTACTTACTTACACACGTAGTATGCCTTACTTTTTTCCAGTACTGA
GAAAGTGCGACATACCAACCAATGCTCTGATCTAAACTAGGTGCCCGGAGCAAGGCAGCGTTTCTCGGCTGGATAAGGTC
GTACAGCGATGTCTTTACTGGCCTGATGGCAGAAGGAAGAAGCGTTCAAAATCTCATGTGGTTGAGCAAAGCCATAATCG
AATGTGCCTATTGGCTCAAGCTTTAGTAGACAAGTATAACGAGAATCACAACCTTTGTGGGGTCTGCTCACTATCCCTCC
CTACATCCTTTTTTCTGTCCTGCTAAGCTGCTACAAGGGTTGCACTATGTCTTT--GCTCATGTAATAATTGCTCATCTG
AGTCATGCTTCTTATTTTAGGATCTAGCAAATGAGTTCAAAGACGTTGTGCAATATCAATCAATTTGTGAGAACCGTGTG
TGGTACTATCACCTCAATATCACTACAAGGGCTAAAGGAGCTGATGGTTTCTCCCATGGCATCGACGATGTATTCTTCGC
GGAAGTCAAACGTGAGCGACAGGGACAACATGAAGAATTGGTGGTCAGCTGTTTCTGCATGCTCAAACCGGCTGATAATG
GTATTC------------TATCTGAAATTTAGAATTGCTTAATGCAGTTTGTGGGTGGTTAAACTTGGATTTACATTTAT
AACATCTCAAACTGGTTCG--------TGCTTCTACTGGTTTGTTACTTGTCAGTTAACTCTCTCCTTGTGTTT---AAT
TAAGGTTGCTGCTATGGTTGTACCAACAATGGATCTCCTGATATGAAGCACCCCAGCATTACTGACAAATACACTGCTGG
TCACTTGAACGCGTATCTGCCATTTGGATGCCGTAGGGAGTTTAGCGACTCCGATGATGAGGTATGATATGGTTTATTTC
CTGGCAAGCCTAACATTATTTTTGTTGCTCCA-TTGCTAACTACATGTGCTTATTCCCACCTTTTACAGGAGGA------
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---------------------AGCTGAGGCTAAGCTAAGAGATATGTATGAGGTACGGCATGTCTTGCGCTGCATTCTAC
CATTTGTAGCATCAACTCTGGTTC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGTATACTTATCGCAATTTGCCTGCTCGTGTATCTGTTCTCTTCAGGGCCTTGATGAGCC
AGACTTTCTGGAGAAACTCTTCACATTTCCCACTTATGTAACTCTGAGGAAAGACAGGAAGGGAACCTGAAGCTGAAAGA
CCGGACTCGAGGG-CCTCAGAGTGAAACAGCATTGCCTGT----TTTAGCTTCTTGTGGTTCAGTTATAGTAATTTTGTA
AGGGCCTCTTCAATCTTTTAGAGTTTGAGAATGGCCAAATTATAACAGGCTACAGTTAAAAAAAAATCAATTTTGTACAA
GTAGCTGGTGCTTGCCATTTGTTTTACACAAATCTGTTTGCGAGGAGTTGTGAATAA-ACTGAGGTTTCCACACCTGTCA
AATTTGAAACATGCCTCTGTCTCAGATGATGAGTCCTACTA--TACGACACTGGTCCACGCGCAAACCAAGATAATTTGT
GCTGAATTACACCTGTTTACGTACCCTACTGAACTACCGAAGCAACTTGTTTTA--------------------------
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>chr2B_1261
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------------------------------GTAGCGA-------GGGAGTGTTCGTGTAGAAATTCCTCTGTTTT-----
-CTTTTGGGGGGGAGGGGAAGAAATTCCTCTGTATTTTAGTTGGGTTGGTTCATTCATGCCGCGAGTTACCGGAACCTTT
CTACTTAGCCTCTAGGAACTAGGACAGGTTCAGGAAGTTCCTCTGTATGTTAGTTGGATGGATTCATTCATGTCGCAAGT
TGCCCGAATATTTCTACTTACCCTCTGGGAACTAGAGGTCTGGGAGGGAGCGTTCTGTATTTTACCATCCATTCATTTTT
CTGAGACAAGTTGTTATTTC-AATTCAGGCACGAGGAGGAGGAGCATCTTGCTGAACCTGCATCATCATCATCTGCACAA
ACTCGGCA--CACCGTCCTTGAATGAGTCGCTCAGCGCTTCGGT---GTCGGA---------------------------
------------------GGCAGTAGCT---------------------CCTGGTTCACCTATTTTGTCCCGGCTACCGC
GTGACTGGGGGCTCCAATTCTACATCATGGTGGATCTTTCAGGATCTTTCCACACGTATCCTCATTTGGGCGGGCCATTC
AAGAGCTTGCAGGAAGCTGACAATGCTATTGATCGCCATCTGCATGACCGCCGGGTCACCAAAATGTAAGGTTTCTCGAC
TTCAT-----------TCTGGTTCGTATCTCCCTTCTTTCGTGCACATACACATG-------------------------
------CTTCTAGGATGTAGGCCACAGAAGATAATCACATTTGTCAAGGAATGTAATGAATGGCCCTAAGCTGGACTACT
GAAAAGCTCACAAG--TTGATTGTAGGAAAATACCAGGCTGGATTAGTTAGTTAATTAAATTTCGTGGCCACTCAAAGTT
AACAGAGCTTCTTCTTTTTTT---ACTGTCAGTGAGAGAGTTGTTGGTGGTGTTTTATCTGTGAGGTTAGTTTCCTGTGC
ATAGCTGAAAATTAGCAAAGTGCACTTTTGTACAATTGGTTAGCATTGAGCCAGGCACACTCAAACAGGTCTGTTTCCTC
ATACTAAACAACAATGATTACAGCCATGACGTTAAGTCACATTAACTAGTCAAAACAGTGTGGTAAGAGCTCACTGAGTT
GGGGATAGGGATGCCTTTCTTTCAGGCACAACTAAGTTTATTGATTCAGAGCTTATAGGCATGTAACCAATCCAGTTGTG
-TTTGTTTT--TTGTACCATGAGTTATGCTATAAAGGTAACTTGGGAGCTGTTTGAT-CCCTTCCTATCCAAGAAAGTTC
CATGGAAACTAGTTCACCTG-TAACATTGGCAGAGTACTTACATAACATGCC------TTG---TTTTTTCCAGTACTGA
GAAAGTGCAACATACCAACCAATGCTCTGATCTAAACTAGGTGCCCGGAGCAAGGCAGCGCTTCTCGACTGGATAAGGTC
GTACAACAATGTCTTTACTGGCCTGATGGCAGAAGGAAGAAGCGTTCAAAATCTCATGTGGTTGAGCAAAGCCATAATCG
GATGTGCCTATTGGCTCAAGCTTTAGTAGACAAGTATAACGAGAATCACAATCTTTTGGGGGTCTGCTCACTATCACTCT
CTACTTGCTTTTT-CTGTC--------CTGCTACCAGGGTTGCACTATGTCTTTTTGCTCATG------TTGCTCATCTG
AGTCATGCTTCTCATTTTAGGATCTTGCAAATGAGCTCAAAGACGTTGTGCAATATCAATCAATTTGTGAGAACCGCGTG
TGGTACTATCATCTCAATATCACTACAAGGGCTAAAGGAGCTGATGGTGTCCCCCATGGCGTCGACGATCTATTCTTCGC
GGAAATTAAACGTGTGCGACAGGGACAACATGAAGAATTGGTGGTCAGCTGTTTCTGCATGCTCAAACCGACTGATAACG
GTATTCCATATATATTCACATCTGAAATTAAGAATTGCTTAATGCAATTTGTGGG---TTAAACTTGGATTTGCATTTAT
AACATCTCAAACCGGTTCATGCACTCTTGCTTCTACTGGCTTGTTACTCGTCAGTTAACTCTCTCCTTGTGTTT---AAT
AAAGGTTGCTGCTATGGTTGTACCAACAACGGATCTCCTGATATGAAGCACCCCAGCAGCACTGACAAATACATTGCTGG
TCACTTGAAAGTGTATCTGCCATTTGGATGCCGTAGGGAGTTTAGCGACACCGATGATGAGGTATGATATGGTTTATTTC
GTGGCGAGCCTAGCATTATTTTTGTTGCTCCAATTGCTAATTACATGTGTTTATTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGCTGAGGCTAAGCTAAGAGATATGTATGAGGTACGGCATGTCTTGCGCTGCATTCTAC
CATTCGTAGCATCAACTCTGATTCTAATACCTCCGTCCTGGTTTATTGGTCTCTTTCGTATTTAGTGTCAAATTTTGACC
ATAGATTTAACTAATAAAATGTCAATGCATGTCATAAAAACATATACCATGAGAAACTATGTTCAAATACGAATCCACCA
ATATAATTTTTGGTGACATGCATTAACATTTTGTTAGTTAAATTTATGGTCAAATTTGACACAAAATATGAAGGGGACCA
ATAAACCAAGACGGAGGTAGTATATACTTATCGCAATTTGCCTGCTCGTGTATCTGTTCTCTTCAGGGCCTTGATGAACC
AGATTTTCTAGAGAAGCTCTTCACATTCCCCACTTATGTAACTCTGAGGAAAGACAGGAAGGGAACCTGAAGCCGAAAGA
CCGGACTCGAGGG-CGTCAGAGCAAAACGGCATTGCGCATTTTATTTATCTTCTGGTGGTTCAATTATAGTAATGTTGTA
AGGCCCCCTTCAATGTTTTAGAGTTTGAGGATGCCCTAATTATAGCATGCTACAGTTAAATGAGCAA----TTTGTA---
---GCTTGTGCTTGCTTTTTGTTTTACACAAATCTGTTTACAAGGAGTTGTGAATAAAACTGAGGTTTTCACAGCTGTCA
AAATTGAAACATGCATCAGCTTCAGAGTACCAGTCCTATCTTTTATGACACCGGT-------------GAAATAATTTCT
GCTGCATTACACCTGTT----TACCCTACTGAACCACCCAAGCAACTTGTTTTAGAGATCCATCTCAAAAGCTTAGAGAT
CATTTTCCAAGAATATCTGGACCTCAGCGTACATCCA-------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS--------------------------S-----S---------S--------------------------
---------S------S-----S---S--S-----------S--------------------------SSS---------
--------SSSSS-SS-SS-------------------------------------------------------------
--------------------SS-S--------------------------------------S--S-------S----S-
-----------------------------S-SS-----------------------S---------S---S----S----
S-----------------------SSS----SS-----S-------S-------SSSSSSS-----S-S--------S--
--SS----S--SSS-SSSS-----------------S------S-S---S------S-------------SSS--S-S--
--------------------------S-----SS-----S----------S-S-----S-----SSSS-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------SS---S-------S------S--S--SS--S------SS-------------S---
----------S-S--S------------------------------------------------------------S---
SS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--S--S----------------
-S------S---S--------------------S---------------------------------SS-SSSSSSSSSS
S----SS------------------S--SSSSS-----------------SSS---------------------------
-----------------------------------------------S----------S--S------------------
-S-------S---S--------------------------SSSSSS-----------------------------S----
----------S----S-------------------------------SS--S----S--------------S---S----
-----SSSSSSSS--------S--------------------------------S----------------S---SSSSS
S------------------S--------------------------------------S---------------------
S------------S--------S---------------------------------------------------------
----S--------S---S---------------------------------------S-------S-------------S
--------------------S-----------------------------------------------------------
-------------------------------S----------S-SSS--S-------SS-S-----S-----S-------
----S----------S-------------------------------------SS--S--------S-------------
-------------------S-------------------------------------------S----------------
---------S------------S---------------------S-----------------------------S--S--
-------------------S-S-SS-------------------------------------------------------
--------------------------------------------------------------------------------
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------------------S-------------------------------------------------------------
-------SSSS------------------------------S---------------S----------------------
--------------SSSS-------------------S-----S---S--SSSSSS------------S-S---------
--------------------------------------------------------------------------------
-----------------------S------------------------------------S----------S--------
----------------------S---------------------------------------------------------
-----------------------------S--------S-------------------------S-S-------S-----
--SS---------S---------------S-------------------------------------S------------
-----------------------------------------------------------------S------------S-
---------------------------------S----------------------------------------------
-----SS-------S------------S-------------S--------------------------------S-----
----------------------S-S-------S----S------------S--S-------------------SSSS---
-----------------S-----------------------------------------------S--------------
-----------SS---S----------------------------S-----S----------------------------
-----------------------S------------------------S-------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------S-------------SSS-SS----
-S------S----S----S-----------------------------S-------------------------------
---------------------------------S--------S-------------------------------------
--------------S-----------------------------------------------------------------
-----------SS------S------------------S-------S--------S--S--S----S-------------
--S---------------------------------S--S----------------------------------------
------------------SSS----S-S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1070
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----------GTCGTCTTCTTCCTCGCCTC--------------------------------------------------
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>reverse_3188
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-------------------------------------------------------------------CGAGAACCGTGTG
TGGTACT-------------------------------------------------------------------------
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>forward_1182
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------------------------------------------AAGGATCTCCCGACTCCACA------------------
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>reverse_3402
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-----------------------------------------GTGCAGTTTGTGGGTGGTTA-------------------
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>forward_1658
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--------------------------------------TTTGGGAGGGAGTGTTCTGC----------------------
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>reverse_4476
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---------------------------------------------------------------------------GAAGA
CTGGACTCAAGGGGC-----------------------------------------------------------------
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----------------------------------------------------------------
