>input_sequence_34667
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--------------------------------------------------------------------ATGGATTGCTTC
GCGGAGGCTGAAGGAAAGAGGTCGCACGACCCGTTGTACTGCAACCCCCACTCGCCACCGGCTACCGGCTTCCCTGTCGA
CAACATCCCCGTGCCGGTCGTCATCGTTGGTGCAGGGCCGGCAGGGCTGGGGATGGCCGCACTGCTCGGCGAGGCTGGAG
TTCCATACAAGCTGCTCGAGCGGTGTAGCTGCATCGGCTCACTCTGGAGGCACCGCACCTACGACAGGTTATGTTTGCAT
CTCCCCAAACAATTCTGCGAGCTCCCACTCATGCCATTCCCCAAAAGCTTCCCCACGTACCCGGCAAGGGACCAGTTTCT
GGAGTACCTCGAGTCCTATGCAAGGAGGTTCAACATCGAGCCACAGTTCCGCCAGGCCGTCGTCAGCGCCGAATTCAATG
GAGACTTTTGGTGGATTCGCACAAAGGAGGTCACCTCACTACCAATCGGCGGTGAGCAGGACACGTACAGCGGCAAAACA
ACTTTGTACCGCTGTAAGTGGCTTGTTGTTGCCACCGGAGAGAATGCCGAGCCAGCGGTGCCAGAGATCGAGGGCACCGG
AAGGTTCAAAGGGCAGCTCATGCACTCCTGTGAGTACCGTAGCGGTGCAGGTTATGCTGGAAAACAAGTCCTTGTCGTCG
GGTGTGGAAATTCTGGGATGGAAGTGTCTCTGGACCTCGCCAACCACAATGCAATAACTTCTATGGTCGTTCGGGGCACG
GTGAGTCTAATTTATTTTCTCTTTGGAATTGATCGAAGATTCTC-ATCTTTTACGATATCTTTCAATTTACTATGTGTTT
TCTATTTAACAAAGCACACCACTTTAGAAATTAATGATGTAATTCTTTTCTATGCA-ATCACTGTGTATAATTAAATGTT
TTT--TGATCTGTTATTTGTCAATTACGCATTCCTTTCATTATAATATACTTAATAATTTTACGTAATTCATCATGTAAC
TTTTTTCCATACAAATCATCACATATATCTTTTAATTCTAGGGAATTCATGATGTAATTGTTTTGCCACATTTTTTT-CC
AATCAGATCATACTATTTATCTTAAAAAAATTATCATGTAATTTTTTGCGAGGAAAATCACCACATAATTGACATGATTT
TTCTCGCTAAAATGTTTCATTAACTTGTTATTTTATTATTTAGTCAGTACATATTAACCAATGCTAGCACCGCATGTTTC
ATTTCAAACACTATTATCTTTATGATGACCTTTATATTATCAATATATTAGACAATGCTTTTTAATTTAATGTGGCCACG
AGGC------ATACTATTAATCTCCGGCCATTTT-CACACATCTAAGTAAAATAATAACAATACAAGTCGCATACTCCTA
TTTGTGTGGGGCCCATGACTAACTTTACTT-----TTTTTGTTGGCTCTTTACAAAACAAAAATGAGGGTCATGTATTTC
CTTTTTTCGTGTTAGTTTATAGTACCGTGCTTAATTTATAAGTAAGCATATATTTAACAATATGTAATAGTTATTGATGT
ATGACTAATGATTTTTTGTTTTGTTTTTAGTTGCATGTTCTGCCTAGGGAGATGCTAGGGTGCTCCACTTTTGGGATCTC
TTTATGGCTTCTCAGGTGGTTCCCTGTACAGGCTGTGGACCGGTTTCTCCTTATGATGGCACGCTTCATTATGGGCGACA
CAACCAACATTGGTATTACTCGGCCAAGCCTTGGCCCAATGGAGCTTAAGGGCGTTTCTGGTAAAACGCCAGTTCTCGAT
GTCGGAACCATAGCAAAGATTAAGTCTGGAAGTATTAATGTAATTTTCATATTTTGTTATTACATATCTTAAATTTGATT
ACATTTTTATATAATCTCTTTAGTAATGTAGTTTTTTCTTGGATAATGTAGGTTTTTCCTGGAGTGCGGTGTTTTCATGA
GCACGGTGTGGAGTTTATTGACGGAAGAACCGAGAACTTTGATGTTGTTATTCTTGCCACAGGTTACAAAAGCAATGTAC
CTTATTGGTTAAAGGTATAAATATACACTATC-------CAATATTGTTACAATCGCAAGCAAGTAAAGCATATTCAACC
TGTTAAACCTTGTATGCACAGGAGAAAACTTTTTTTTCAGAGAAAGATGGCTTCCCAAGAAAGTCAAAAGAGTGGAAAGG
AAAAAATGGTCTCTATGCTGTTGGTTTCTCGAGGAGTGGACTTTTAGCGGTGTATAAGGATGCAACCAAGATCTCGGAGG
ATATTGTTCAACAATGGCGTGATATGTGTATGGAAGATGCGAGAGAAACTTTATCCAATCGAAGAACACCATGTCCTATT
TGA-----------------------------------------------------------------------------
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---------------------
>chr3D_1_TraesCS3D01G157600
AGAGTTTGTTTGAGAATACCCGGCCAAATAAGTTGGGATAAAGCACCCGGGTTAGAACAAAAAATTAC-TAGGTGTTTTA
ATCTCTCGTACGTCTACACAAAGTTTTTTTTTAATTTTTGAAAACTACGTCTACACAAAGTTGTTTGCACGCGCGCACAC
AGACACAGGTTCCATTGCAGATCGATCACATCGCCCGGGCGAAAACCACAAGTACCAACACAGGCATGCGTGCGGCCAGG
GAGTCGAGGCTGGCACGGGGTCCGACCGAGACCCCCAAACCAACCACTAACCGACCACGC-AAAAACAAACAAACAAATC
GAATATAAACTATGACTACG-----GGTTCCTCGATTGCCTCCTGTCCGGTGCCTTCTCCCTCCCCCGATCGATCCTCCT
CTCCTAGCAGTCCGCCCGCAAGCTCAGCTCCTCCTCTTAGCCCACCGGCCGCAT----GCTCCTCCTAGTCTCGTGCTGC
TCCACGAGTTAAGGATCAACCCATACACAACAAGTGCTACTAGTTTATTATCCGAAAACCAGACCCCAGATCTCCAACGT
CTGCGGACAGCCAGAGACCCCCCAAGCGATGCATCTAACG------CAGACCCTGGTCAGGTGACGTACGACTGCTATAG
CGCGCAGCTCGATCGAGCCGGCCGTTAAGGTTCTACCTATATGCATGCATATCCGCAAGCAATATTCCAATCCAAGATCG
AAATGCCGCTGAACACAGCCACCACTCCCTACTTCTAGGGACGGGAAACCAGCCGAGAGGAGGAGATACTAGTCGTATAC
CCACTAGATTCCATCTTCTCTGCTATTTTTGGAACAACAGTTGCGCTAGCCTCCTCCTCCACCGCTCCATCCCATCCGCT
ACCCCATGCTTCGCGGGATGAGAAATAGAGCTACGCCACATATATGTCA---CTTATATAG--CTTAACCTCTTCCTCGA
TCGATCACAGTGGATAGCAA-TAGTGTCTGCAGCTGACGCCCGCCGC--CT---TCATCCACGACGTCATGGATTGCTTC
GCGGAGGCTGAAGGAAAGAGGTCGCACGACCCGTTGTACTGCAACCCCCACTCGCCACCGGCTACCGGCTTCCCTGTCGA
CAACATCCCCGTGCCGGTCGTCATCGTTGGTGCAGGGCCGGCAGGGCTGGGGATGGCCGCACTGCTCGGCGAGGCTGGAG
TTCCATACAAGCTGCTCGAGCGGTGTAGCTGCATCGGCTCACTCTGGAGGCACCGCACCTACGACAGGTTATGTTTGCAT
CTCCCCAAACAATTCTGCGAGCTCCCACTCATGCCATTCCCCAAAAGCTTCCCCACGTACCCGGCAAGGGACCAGTTTCT
GGAGTACCTCGAGTCCTATGCAAGGAGGTTCAACATCGAGCCACAGTTCCGCCAGGCCGTCGTCAGCGCCGAATTCAATG
GAGACTTTTGGTGGATTCGCACAAAGGAGGTCACCTCACTACCAATCGGCGGTGAGCAGGACACGTACAGCGGCAAAACA
ACTTTGTACCGCTGTAAGTGGCTTGTTGTTGCCACCGGAGAGAATGCCGAGCCAGCGGTGCCAGAGATCGAGGGCACCGG
AAGGTTCAAAGGGCAGCTCATGCACTCCTGTGAGTACCGTAGCGGTGCAGGTTATGCTGGAAAACAAGTCCTTGTCGTCG
GGTGTGGAAATTCTGGGATGGAAGTGTCTCTGGACCTCGCCAACCACAATGCAATAACTTCTATGGTCGTTCGGGGCACG
GTGAGTCTAATTTATTTTCTCTTTGGAATTGATCGAAGATTCTC-ATCTTTTACGATATCTTTCAATTTACTATGTGTTT
TCTATTTAACAAAGCACACCACTTTAGAAATTAATGATGTAATTCTTTTCTATGCA-ATCACTGTGTATAATTAAATGTT
TTT--TGATCTGTTATTTGTCAATTACGCATTCCTTTCATTATAATATACTTAATAATTTTACGTAATTCATCATGTAAC
TTTTTTCCATACAAATCATCACATATATCTTTTAATTCTAGGGAATTCATGATGTAATTGTTTTGCCACATTTTTTT-CC
AATCAGATCATACTATTTATCTTAAAAAAATTATCATGTAATTTTTTGCGAGGAAAATCACCACATAATTGACATGATTT
TTCTCGCTAAAATGTTTCATTAACTTGTTATTTTATTATTTAGTCAGTACATATTAACCAATGCTAGCACCGCATGTTTC
ATTTCAAACACTATTATCTTTATGATGACCTTTATATTATCAATATATTAGACAATGCTTTTTAATTTAATGTGGCCACG
AGGC------ATACTATTAATCTCCGGCCATTTT-CACACATCTAAGTAAAATAATAACAATACAAGTCGCATACTCCTA
TTTGTGTGGGGCCCATGACTAACTTTACTT-----TTTTTGTTGGCTCTTTACAAAACAAAAATGAGGGTCATGTATTTC
CTTTTTTCGTGTTAGTTTATAGTACCGTGCTTAATTTATAAGTAAGCATATATTTAACAATATGTAATAGTTATTGATGT
ATGACTAATGATTTTTTGTTTTGTTTTTAGTTGCATGTTCTGCCTAGGGAGATGCTAGGGTGCTCCACTTTTGGGATCTC
TTTATGGCTTCTCAGGTGGTTCCCTGTACAGGCTGTGGACCGGTTTCTCCTTATGATGGCACGCTTCATTATGGGCGACA
CAACCAACATTGGTATTACTCGGCCAAGCCTTGGCCCAATGGAGCTTAAGGGCGTTTCTGGTAAAACGCCAGTTCTCGAT
GTCGGAACCATAGCAAAGATTAAGTCTGGAAGTATTAATGTAATTTTCATATTTTGTTATTACATATCTTAAATTTGATT
ACATTTTTATATAATCTCTTTAGTAATGTAGTTTTTTCTTGGATAATGTAGGTTTTTCCTGGAGTGCGGTGTTTTCATGA
GCACGGTGTGGAGTTTATTGACGGAAGAACCGAGAACTTTGATGTTGTTATTCTTGCCACAGGTTACAAAAGCAATGTAC
CTTATTGGTTAAAGGTATAAATATACACTATC-------CAATATTGTTACAATCGCAAGCAAGTAAAGCATATTCAACC
TGTTAAACCTTGTATGCACAGGAGAAAACTTTTTTTTCAGAGAAAGATGGCTTCCCAAGAAAGTCAAAAGAGTGGAAAGG
AAAAAATGGTCTCTATGCTGTTGGTTTCTCGAGGAGTGGACTTTTAGCGGTGTATAAGGATGCAACCAAGATCTCGGAGG
ATATTGTTCAACAATGGCGTGATATGTGTATGGAAGATGCGAGAGAAACTTTATCCAATCGAAGAACACCATGTCCTATT
TGATAAAATTATTTTGCGTACTAGTCAGTCTAGAG--TAGGCATGCCAGATCAGTAGATGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAC--------------------------------------
------------------------------------------------TAGATCAGGCTAGCACGCTTCAATTTTTTTCC
CGCTCACACTTGTACACTCATAGAATAGTTTATTTGTTCGTAGTTTTAAAATTATTTTGAGGAAATCATAAATTCATTTG
AT-TTTTTTTCTA-TTTTGTATTAGATTTTATTGTAAGAAAAAAGGATACCTCTCGTGGTATTTTATAAATATGCAATAT
ATCTTCCTTTTTTGAAGTGTTGTGACTTTATTTGTCTTATTTATGTTTAGAATTATTTAAACATTTGAGAAATATTCATA
TGTACTCATATATTTTTATTAATTAAAACTATAATCATGACATTTTACTTAATAATATGTTAAAATCTTTAAATGATCAT
TTGCCGTATTTTTTTTGACTGTGAGTAAATGTGCGCGCACACACACTTG---GATGCACCTTTCTTAATATATAGTTCTA
CATATATAGATCAGTATAGAATGTTCGAGCAGTAGCTGATATTTTCTATAGAGACCATTTATGTTCAGGTAACCAGTTTG
TTCATTTT-TTAA-GTGGGCAATT-------------------------------------------CCATCTGTTAATT
TTTTAATCAATGAGAATTGGG
>chr3B_1
AGAGTTTGTTTGAGAATTCCCGGCCAAATAAGTTGGGATAAAGCACT--GGTTAGAACAAAAAAAAATTTAGGTGTTTTT
ATCTCTCG-------------------------------------TACGTCTACACGAAGTTGTTTGCACGCGAGCACTC
AAACACAGGTTCCATTGTAGATCGATCGCATCGCCC-GGCGAACACCACAAGTACCAACACAAGCATGCGTGCGGCCGGG
TAGTCGAGGCTGGCACGG--TCCGACCGAGACCCCCAGACCAACCACTAACCGACCACGCAAAAAACAAACAAACAAATC
GAATATAAACTATGACTACG-----GGTTCTTCGATTGCCTCCTGTCCGGTGCCTTCTCCCTCCCC----CGATCCTCCT
CTCCTAGCGGTCCGCCCGCAAGCTCAGCTCCTCCTCTTAGCCCACCGGCCGCATGCTAGCTCCTCCTAGTCTCGTGCTGC
TCCACGAGTTAAGGATCAACCCATACACAACAAGTGCTACTAGTTAGTTATCCGAAAACCAGACCCCAGATCTCCAACCT
CTGCGGACAGCCAGATACCCCCCAGGCGATGCATCTAACACAGACCCAGACCCTGGTGAGGTGACGACTGCTAGC--TAG
CGGGCAGCTCGATCGAGCCGGCAGTTAAGGTTCTACCTACATGCATGCATATCCACAAGCAATATTCCAATCCAAGATCG
AAATGCCGCTGAACACAGCCACCACTCCCTACTTCTAGGGACGGGAAACCAGCCGAGAGGAGGAGATACTAGTCGTATAC
CCACTAGATTCCATCTTCTCTGCTATTTTTGGAACAACAGTTCCGCTAGCCTCCTCCTCCACCGCTCCATCACATCCGAT
ACCCCATGCTTCGCGGGATGAGAAATAGAGCTACGCCACAGATATGTGACTGCTTATATAC--CTCAACCTCTTCCTCGA
TCGACCACAGTGGATAGCAAATAGTGTCTGCAGCTGACGCCCGCTGCCGCT---TCATCCACGACGTCATGGACTGCTTT
GCGGAGGCTGAAGGAAAGAGGTCGCATGACCCGTTGTACTGCAACCCCCACTCGCCACCGGCTACCGGCTTCCCTGTCGA
CAACATCCCCGTGCCGGTCGTCATCGTTGGTGCAGGGCCGGCAGGGCTGGGGATGGCCGCACTGCTCGGCGAGGCTGGAG
TTCCATACAAGCTGCTCGAGCGGTGTAGCTGCATCGGCTCACTCTGGAGGCACCGCACCTACGACAGGTTATGTTTGCAT
CTCCCCAAACAATTCTGTGAGCTCCCACTCATGCCATTCCCGAAAAGCTTCCCCACGTACCCGGCAAGGGACCAGTTTCT
GGAGTACCTCGAGTCCTATGCAAGGAGGTTCAACATCGAGCCACAGTTCCGCCAGGCCGTCGTCAGCGCCGAATTCAATG
GAGACTTTTGGTGGATTCGCACAAAGGAGGTCACCTCACTACCAATGGTCGGTGAGCAGGCCACGCACAGCGGCAAAACA
ACTTTGTACCGCTGTAAGTGGCTTGTTGTTGCCACCGGAGAGAATGCCGAGCCAGCGGTGCCAGAGATCGAGGGCACTGG
AAGGTTCAAAGGGCAGCTCATGCACTCCTGCGAGTACCGTAGCGGTGCAGGGTATGCTGGAAAACAAGTGCTTGTCGTCG
GGTGTGGAAATTCTGGGATGGAAGTGTCTCTGGACCTCGCCAACCACAATGCAACAACTTCTATGGTTGTTCGTGGCACG
GTGAGTCTAATTTATTTTTTCTTTCGAATTGATCGAACATTTCT-ATCTTCTACTATATTTTTCAATGTACGATGTGTTT
TCTATTTAACAAAACACACCACTTTAGAAATTAATGAGGTAATTCTTTTCTATGCACATCACCGTGTATAATTAAACATT
TTTTATGATATGTTATTTGTCAATTACGCATTCCTTCCATTATGATGTACTTATTAATTTTATGTAATTCATCATGTAAC
TTCTTTCCATACAAATCATCACATATGTGTTTTAATTCTAGGGAATTCATGATGTAATTGTTTTGCCACATTTTTTTTCC
AATCAGATCATACTTTTTATCTTAAAAAAATTATCATGTAATTTTG-CCGAGGAAAATCACCACATAATTGACATGATTT
TTCTCGGTAAAATGTTTCATTAATTTGTTACTTTATTATTTAGTCAGTACATATTAACCAATGCTAGCACCGCATGTTTC
ATTTCAAACACCATTATATTTATGATG----TTATATTATCAATATATTAGATAATGTTTTTTAATTTAATGTGGCCACG
AGGCAAAGGCATACTATTCATCTCCGGCCAATTTCCACACATCTAAGTAAAATGATAACAACAAAAGTCGCAGACTCCTA
TTTGTGTGGGGCCCATGGCTAACTTTACTTGTTTTTTTTGGTTGCCTCTTTACAAAACAAAAATGAGGGTCACGTATTTC
CTTTTTTCGTGCTAGTTCATAGTACTGTGCTTAATTTATAATTAAGCATATCTTTAACAATATGTAATAGTAATTGATGT
ATGACTAATGTTTTTTTTTTG-GTTTTTAGATGCATGTTCTGCCTAGGGAGATGCTAGGGCACTCCACTTTTGGGATCTC
TTTGTGGCTTCTCAGGTGGTTCTCTGTACGGGCTGTGGATCGGTTTCTCCTTATGATGGCACGCTTCATTATGGGCGACA
CAACCAACATTGGTATTACTCGGCCAAGCCTTGGCCCAATGGAGCTTAAGGGCGTTTATGGTAAAACGCCAGTTCTCGAT
GTCGGAACCATAGCAAAGATTAAGTCTGGAAGTATTCATGTAATTTTTATATTTTGTTATTACATATCTTAAATTTGATT
ACCTTGTTATATAATCTCTTTAGTAACAAAG-TTTTTCTTGGATAATGCAGGTTCTTCCGGGAGTGCGTTGTTTTCATGA
GCATGGTGTGGAGTTTATTGACGGAAGAACCGAGAACTTTGATGTTGTTATTCTTGCCACAGGTTACAAAAGCAATGTAC
CTTACTGGTTAAAGGTATAAATATACACTATCCAACCAACAATATTGTTACAATCGCATGCAAGTAAAGCATATTCAACA
TGTTAAACCTTCTATGTGCAGGAGAAAACTTTTTTCTCGGAGAAAGATGGTTTTCCAAGAAAGTCAAAAGAGTGGAAAGG
AAAAAATGGTCTCTATGCTGTTGGCTTCTCGAGGGGTGGACTTTTAGCGGTGTATAATGATGCAACCAGGATCTCAGAGG
ATATTGTTCAACAATGGCGTGATATGTGTATGGAAGATGTGAGAGAAACTTCATCCAATCGAAGAGCAGCGTGTCCTATT
TGATCAAATTATTTCGCGTACTAGTCAGTCTAGTATATAGGCATGCTAGATCAGTAGATGCA------------------
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------------------------------------TATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATAGATCAGGCTAGCACGCTTCAATTTTTTCCC
CGCTCACACTTGTACACTCATAGAATAGTTTATTTGTTCGTAGTTTTTAAATTATTTTGAGGAAATCATAAATTCATTTG
AT-TTTTTTTCTATTTTTGTATTAGATTTAATTGTAAGAAAAAAG-ATACCTCTCGTGGTATTTTATAAACATGCAATAT
ATCTTCCTTTTTTGAAGTGTTGTGACTTTATTTGTCTTATTTATGTTTAGAATTATTTAAACATTTGAGAAATATTCATA
TGTACTCATATATTTTTATTAATTAAAACTAGGATCATGAAATTTTACTTATTAATATGTTAAAATCTTTAAATGATCAT
TTGCAGTA------TTGAATATGAGTAAATGAGCGCGCACACGCACTTGTGTGATGCACCTTTCTTAATATATAGTTATA
CATATACAGATCAGTATAGAATGTTCGAGTAGTAGCTGATATTTTCTATAGGGACCATTTATGTTCAGGTAACCACTTTA
CTCATTTT-TTAAGGTGGGCAATT-------------------------------------------CCATCTGCTAATT
TTGTAATCAATGAGAATTGGG
>chr3A_125
--------------------------------------------------------------------------------
---------------------------------------------TACGTCTACACGAAGTTGTTTGCACGCGAGCACAC
AAACACAGGTTCCATTGCGGATAGGTCACATCGCCC-GGCGAACACCACAAGTACCAACACAAGCATGCGTGCGGCCGGG
TAGTCGAGGCTGGCAGGG--TCCGACCGAGACCTCCAAACCAACCACTAACCGACCACGC-AAAAACAAACAAACAAATC
GAATATAAACCTAAACTATAACTACGGTTCCTCGATTGCCTCCTGTCCGGTGCCTTCTCCCTCCCCGGATCGATCCTCCT
CTCCTAGCGGTCCGCC-GCAAGCTCAGCTCCTCCTCTTAGCCCACCGGCCGCATGCTAGCTCCTCCTATTCTCGTTCTGC
TCCACGAGTTAAGGATCAACCCATACACAAGAAGTGCTACTAGTTAGTTATCCGAAAACCAGACCCCAGATCTCCAACCT
CTGCGGACAGCCAGATACCCCCAAAGCGATGCATCTAACA------CAGACCCTGGTTAGGTGACGACTGC------TAG
CGCGCAGCTCGATCGAGCCGGCCGTTAAGGTTCTACCTACATGCATGCATATCCGCAAGCAATATTCCAATCCAAGATCA
AAATGCCGCTGAACCCAGCCACCACTCCCTACTTCTAGGGACGAGAAACCAGCCGAGAGGAGGAGATACTAGTCGTATAC
CCACTAGATTCCATCTTCTCTGCTATTTTTGGAACAACAGTTCCGCTAGCTTCCTCCTCCACCGCTCCATCCCATCCGCT
ACCCCATGCTTCGCGGGATGAGAAATAGAACAAGGCCACAGATATGTGACTGCTTATATACACCTTAACCTCTTCCTTGA
TCGACCACAGTGGATAGCAAATAGTATCTGCAGCTGACGCTCGCCGCCGCTTCATCATCCACGACGTCATGGACTGCTTC
GCGGAGGCTGAAGGAAAGAGGTCGCATGACCCGTTGTACTGCAACCCCCACTCGCCACCGGCTACCGGCTTCCCTGTCGA
CAACATCCCCGCGCCGGTCGTCATCGTTGGAGCAGGGCCGGCTGGGCTGGGGATGGCCGCACTGCTCGGCGAGGCTGGAG
TTCCATACAAGCTGCTCGAGCGGTGTAGCTGCATCGGCTCCCTCTGGAGGCACCGCACCTACGACAGGTTATGTTTGCAT
CTCCCCAAACAATTCTGTGAGCTCCCACTCATGCCATTCCCAAAAAGCTTCCCCACGTACCCGACAAGGGACCAGTTTCT
GGAGTACCTCGAGTCCTATGCAAGGAGGTTCAACATCGAGCCACAGTTCCGCCAGGCCGTCGTCAGCGCCGAATTCAATG
GAGACTTTTGGTGGATTCGCACAAAGGAGGTCACCTCACTACCAATGGGCGGTGAGCAGGCCACGCACAGCGGCAAAACA
ACTTTGTACCGCTGTAAGTGGCTTGTTGTTGCCACCGGAGAGAATGCCGAGCCAGCGGTGCCAGAGATCGAGGGCACCGG
AAGGTTTAAAGGGCAGCTCATGCACTCGTGCGAGTACCGTAGCGGTGCAGGGTATGCTGGAAAACAAGTGCTTGTCGTCG
GGTGTGGAAATTCTGGGATGGAAGTGTCTCTGGACCTTGCTAATCACAATGCAATAACTTCTATGGTTGTTCGTGGCACG
GTGAGTCTAATTTATTTTTTCTTTGGAATTGATCGAACATTTCTTATCTTTTATAAAATTTATCATTGTACTATGTGTTT
TCTATTTAACAAAGCACACCACTTTAGAAATTACTGAGGTATTTCTTTTCTATGCA-ATCACCATGTATAATTAAATGTT
TTT--TGATATGTTATTTGTCAATTACCCATTCCTTCCATTATGATATACTTATTAATTTTACGCTATTCATTATGTAAC
TTTTTTCCATACAAATCATCACATATATCTTTTAATTCTAGGGAATTAGTGATGTAATTGTTTTGCCACATTTTTTT-CC
AACCAGATCATACTATTTATCTTAAAAAAATTATCATGAAATTTTTTCCGAGGAAAATCACCACATAATTGACATGATTT
TTCTTGGTAAAATGTTTCATTAACTTGTTACTTTATTATT-AGTCAGTACATATTAACCAATGCTAGCACCACATGTTTC
ATTTCAAACACTATTATCTTTATGATG----TTATATTATCAATATATTAGATAATGTTTTTTAATTTAATGTGGCCACG
AGGC------ATACTATTTATCTCCGGACATTTT-CACACATCTAAGTAAAATGATAACAACAAAAGTCGCAGTCTCCTA
TTTGTGT-GGGCCCATGGCTAACTTTACTT-----TTTT-----------------------------------------
-------CGTGTTAGTTTATAGTATTGTGCTTAATTTATAATTAAGCGTATCTTTAACAATATGTAATACTAATTGATGT
ATGGCTAATGGTTT---------TTTTTAGTTGCATGTTCTGCCTAGGGAGATGCTAGGGCGCTCCACTTTTGGGATCTC
TTTGTGGCTTCTCAGGTGGTTCCCTGTACAAGTTGTGGATTGGCTTCTCCTTATGATGGCACGCTTCATTATGGGCGACA
CAACCAACATTGGTATTACTCGGCCAAGCCTTGGCCCAATGGAGCTTAAGGGCGTTTCTGGTAAAACGCCAGTTCTCGAT
GTCGGAACCATAGCAAAGATTAAGTCTGGAAGTATTAATGTAATTTCTATATTTTGTTATTACATATCTTAAATTTGATT
AACTTGTTATATAATCTCTTTAGTGACATAGTTTTTTCTTGGATAATGCAGGTTTTTCCAGGAGTGCGGTGTTTTCATGA
GCATGGTGTGGAGTTTACTGACGGAAGAACCGAGAACTTTGATATTGTTATTCTTGCCACAGGTTACAAAAGCAATGTAC
CTTACTGGTTAAAGGTATAAATATACACTACCCAACCAACAATATTGTTACAATCGCATGCAAGTAAGT-ATATTCAACC
TGTTAAACCTTCTATGTGCAGGAGAAAACTTTTTTCTCGGAGAAAGATGGCTTCCCAAGAAAGTCAAAAGAGTGGAAAGG
AAAAAATGGTCTCTATGCTGTTGGCTTCTCAAGGGGTGGACTTTTAGCAGTGTATAAGGATGCAATCAAGATCTCAGAGG
ATATTGTTCAACAATGGCATGATATGTGTACGGAAGATGTGAGAGAAACTTCATCCAATCGAAGAGCACCATGTCCTATT
TGATCAAATTATTTCGCGTACTAGTCAATCTGGTG--TAGGCATGCCAGATCAGAAGATGCA------------------
--------------------------------------------------------------------------------
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------------------------------------TATAAC--------------------------------------
------------------------------------------------TAGATCAGGCTAGCACGCTTCAAATTTTTTTC
C-CTCACACTTGTACACTCATAGAATAGTTTATTTGTTTGTAGTTTTTCAATTATTTTAAGGAAATCATAAATTCATTTG
ATTTTTTTTCCTATTTTTGTTTTAGATTTAATTGTAAGAAAAAGG-ATACCTCTCGTGGTATTTTATAAACATGCAATAT
ATCTTTCTTTTTTGAAGTGTTGTGACTTTATTTGTCTTATTTATGTTTAGAATTATTTAAAAAATTGAGAAATATTCATA
TGTACTCATATATTTTTATTAATTAAAACTATGATCATGAAACTTTACTTACTAATATGTTAAAATCTTTAAATGATCAT
TTGCAGTA------TTGAATATGAGTAAATGTGCGCGCACACACACTCATGTGATGCACCTTTCTTAATATATAGTTCTA
CATATATAGATCGGTATAGAATGTTCGAGTAGTAGCTGATATTTTCTATAGAGACCATTTGTGTTCAGGTAACCAGTTTA
CTCATTTTCTTAA-GTGGGCAATTCGGTAAGTGCAACTCAGTAAGTTTGCAGTAACCATTTTCTTAACCATCTGTTAATT
TTTTAATCAATGAGAATTGGG
>SNPs
-----------------S----------------------------SSS---------------SS-S-----------S
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----------------S------
-S----------------------------------S------S------------------S--------------S--
S-----------------SS------------------------------------------------------------
------------------------------------------------------------------S-------------
--------S-----------------------------------------------------------------------
---------------------------------------------SS-------------------------------S-
---------------S-----------------------S-----------------S--------SSS-SSS--SS---
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------S------S------------S-------------------
----S--------------------------------------------------------------------S------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-----------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-------------S----S--------------
--------------------------------------------------------------------------------
------------------------------S--------------------S-----------------S----------
-------------------------------------------------------------------S-----S------
------------------S------------------S---SSS----------S----S-------S------------
-------------------------------------S------------------------S-----------------
---------S--------------------------S------S---------S--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
------S-----------------------S-------------------------------------------------
---------------------------SSSS---------------------S----S----------------------
------------------S----------------------------------S-------S-S--------S-------
-----------------S---------------------S----S---------------------------S-------
-------------------------S---------------S---------S-------------------S--------
----------S------S--SS--------------------------------------S-------------------
---S-----------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--S--S--------------------SS--------------------S----------S--------------------
---S----------------------------------------------------------------------------
----S-----------------------------------------------------S---------------------
-----------S----SS-----------------S--S-----------------------------------------
------------------------S---------S----------------------------------------S----
---------------------------------------S-----------S-------------S--------------
----S---------S------------------S--------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----------------------------S---------------S------------------------S---------
--------------------------------------------------------------------------------
--------------------------------S-------S----------S----------------------------
----S---SSSSSS----S-S-----------------------------------------------------------
-----------------------------S-------------------------------------------------S
S-------------------------------------------------------------------------------
---------------------
>forward_632
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----------------------------------------------------CTGGTCAGGTGACGTACGAC--------
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>reverse_2644
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATGGCTTCTCAGGTGGTTCC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_2621
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------GCCTAGGGAGATGCTAGGGT-------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_4259
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGTGAGTAAATGTGCGCGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
