>input_sequence_34619
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----------------------------------------------------ATGAGCTTAGCGCTTCTAGGGGGCTACT
CCTCCGCCGAGGACGACGACCCCGCCGCCGGCGCCGGCGCCGAGCTGAGCGACTCCGGCGACTCATCAGCCGAAGAGGCC
GGATCTGACGGAGACGAGAAGTCCGCTCCGTCGAAGCCGGCTGCGAAGCCCCGCCCCCGCGTAAACCCTAGCCCCGGAGA
TGGGGACTCCTCGCTGCCCTCGGCGCTAGATGTCTTCGCCGAGATCTCCGGGCCCCCGGCTTTCCTCAACCGCAGAGTGG
CCCAGCCCGAGGAGGTCGGGGAGGCGCTCGGCGTGCTCGATCGCCGCTCCAACTCCAAGAGGAGAAAGCCGCCACCTCCC
GGTGAGACGCTTAAACTACTGCTAATTTTCCAGCAGATTATCGTGCTTTGATCTTCGTGCTGGTTCAGAACTGGCTGTGT
TTTGACACTTGCAGTGAGGATTTAGTGGTAGAACCAGAATTCTATAGTTCAAACATGGC-------------ACAGTCAG
CGTATTATATGAGGAGGTTTGGTTGTTCCTGCTGTAGTGTCGACTTTCTTAGTGGTCTC--------TGGTTGTGGAATT
GCATTGCTATAGGGACATGGGGTTAGTGTTTCGATTGCGAGGCCA------GACTGTTATTTGCTAGAGCCC-AGAGTTG
GTCGATTTG-----ATTCTAGCCTGACTTACAATGCACTGGTTCGTGTCCTACATGAAAATTAGTTTATCTGTAGTCGTC
TTGGTGTGCTTATGGTGGCCAGTAGTT-----TAGAATGACATGTCCGGTCTATTGTCTGTGATAAGTGAGTAAAATCAG
G-GAACTGG--------TGTTGTTTTCTGTTGTTATTTTACATGTCCTAGTGATTAATTGCTATACACAAGTATCATGAA
GCCAAGATGATGGCATGGCCAGCATATTTA-GATAGAAAAGAGAGATGGAACACATTTATACAAATGAAGACAGATGTTT
TTCGGTTTAGTTCTGCATTCAACATATTAGCCTTCTATTAGTTTGATGTACACAATGAGGGTTGTGATTACATTATTGTG
CTATGCTACTTGTGCACCATGTATGTGCTTGTGCTAGAAATTGCATAATTAAATTGGCATCCA---------TTTCTTAG
AGCACAAGATAAGGTGAGAAATATGTAAATGTGTTTATTGCTGTGGCCATTATCCTGTTCTTACTGCGGTGTGTTTGTTA
GGAGACTTAGAAGGACTATATATCTGGGTATCTAT----CTTCTTGCAGGAGGAAATAGGTC------------------
---------------------ACAAAAACCC-GCCATCCTCTGCTTGAGTACATCAAATGGATATAATTGGCCTTTTTGA
ATTGAATCTGTATTTTGATACATAATTTTATAGCTCGTTAATATGTTTGAATATGAGATGCCTAGTAAAGCAGATCTTAT
CATCTGTGCTGGCTTCTGATAATATCCCTAGTTTTAC-TAATGGCAATTATTATATTTCAAATCCAAGCTGGCTCCTGGC
TAATCTTACTAAAAACTATGTTCAGGTGCGGTTGTGGCGGCGAAGCCACAGATGGTTGCCATCCGTGAACGAGTTAGCAG
TGACGTGAAGAATGGTGCCAATCCTCCAGGTTCTGTTGGATGTTCGTCGAATGGATATAAC--TTTCCCTTTCTAAATAG
GATTAGCAAAATTACTTATTGGCGGA-------ATAGCTTGTTAATATGCTTGAGTATGC---GATAGATGGTAAAGC--
AGATATTATCATATGTGCTAACATGTGATAAAAGTCTTAGTTCTGCACTTCTGCTCATGCTAATTATTCTACTTCAA---
------ATTCA--TTATCTCTTGGCTAATCTGACT-----ACAAAACTGTCTCCAGTTGCGGTTGTGTCGGCGAAACCAC
AGTTGGTTGCTGGTCACGAACGAGTTAGCAGTGACATGAAGAATGGTGCCAACCCTCCAGGTTCTGTTGAAGGAAAGAGG
AAAATAGGCGCTGCAAATCCTGGTCCAGAAGATGCTGCCGAGCTTCTAAGGTAACAGATGGCCACTTTGTTTCACTAATA
CAACTACGAAATAACTGAACAAAAGCAC---------ATATATGGCTGAATTGTTTATACGATCTGTTGTCATTCCTGGT
ATATGCCTTATACAGGACTCCTCACTGTGTTTTTTTCTCTTCGAT--TTGTAGAATGTGCCTCCAGTGTGGTATACCAAA
GACCTATTCACATGCGCAAGGAATGGTATGCCCTGTTTGCAACGACAGACCGGTGCAGGCTAAAGAGCCAGAGAAGAAGA
AGGGTTCTGCTGTAAAAGACAAGGAGAAAGTGAAGAGGATGAGAGGGCAATCGTCACATGCATCGTGGAAGAGCGAAACT
GAGATGGCCCTGCGCCAACAATTTGACTGA--------------------------------------------------
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>chr6D_1_TraesCS6D01G281000
GAGACAGCTCATTCTCGGTTTTTGTCCCCACCGATTTTTGGGAGCTTCCCTCAACCAGTATTTTCATTTTTCTGTTTTCT
GTTTTCTGTTTTTTGTTTCTTTTTTCCTTTTTTCAATTACTTATTTTCCCTTTTTCTTCTTGTTTTTTCTTTCCTTTCTT
CTTTTCTATTTTCCTTTTTCTTTTTTCTTTTTTGCGAACATATTTCAAATTCCTGAACATTTTTTGAGGTCATTAACATT
TTTTAAAATCATAAACATTTCTCAGCTTCGTGATTG--TTTTGGAAAATCATGAATTTTTTTCATATTTGTGAATAGTTT
TTTCTGAAATTAGGAACATTTTGTGACACACGTGAACATTGTTTTGAATTGGTGAATTGTTTTGATCGACAAACATATTT
TCTGAAATTCACGAACA-TTTTTTGTTTTGATGAACAATTTTTGAATCATTTAACTTTTTTGAAATTTTGGAACAAATTT
TGAAATTCTTGTACAC-TTTTTGAATTGTTTTGAACTTTTTGAATTCACAAAA--TTTTAAAAATCCACAAACATTTTTG
GAATATGAGAACATTTTTTCAAAATCGTGTACATTATTTGATTTCCTGA--ATATTTTTTAAAATCGTGAAAAACATTTT
GAATCTACAGATATTTTTTCGAAATGACAATCATTTTATGATTTCCCGACTATTTTTCAAAATTTTAAGCATTTTTTTAC
ACTTTATGATTTCTGGAACATTTTTTCCAGTTTTATTTTTTAATCACGAGCATTTTTGTAATCCCGAATTATTTGGAAAA
ATAAAGAACGAAAGTAGTAGAAAAGAAAAAAGGAAAAGAGAAAAACGAAATGTAAAAAACAGGGG-CGGCCCGCCCCGCC
CGCACATGGGCTGGCCCAAAATTGCGTGCAGAGGGACCTCGCCGCCCCTTCTTTGTTCCGCCGCGCCGTAGAGAGTTTTG
CTAGATTTGCGGCCGCTCAAGCCAGGAAAGCCCAAGAACAACGGACAC---GATGAGCTTAGCGCTTCTAGGGGGCTACT
CCTCCGCCGAGGACGACGACCCCGCCGCCGGCGCCGGCGCCGAGCTGAGCGACTCCGGCGACTCATCAGCCGAAGAGGCC
GGATCTGACGGAGACGAGAAGTCCGCTCCGTCGAAGCCGGCTGCGAAGCCCCGCCCCCGCGTAAACCCTAGCCCCGGAGA
TGGGGACTCCTCGCTGCCCTCGGCGCTAGATGTCTTCGCCGAGATCTCCGGGCCCCCGGCTTTCCTCAACCGCAGAGTGG
CCCAGCCCGAGGAGGTCGGGGAGGCGCTCGGCGTGCTCGATCGCCGCTCCAACTCCAAGAGGAGAAAGCCGCCACCTCCC
GGTGAGACGCTTAAACTACTGCTAATTTTCCAGCAGATTATCGTGCTTTGATCTTCGTGCTGGTTCAGAACTGGCTGTGT
TTTGACACTTGCAGTGAGGATTTAGTGGTAGAACCAGAATTCTATAGTTCAAACATGGC-------------ACAGTCAG
CGTATTATATGAGGAGGTTTGGTTGTTCCTGCTGTAGTGTCGACTTTCTTAGTGGTCTC--------TGGTTGTGGAATT
GCATTGCTATAGGGACATGGGGTTAGTGTTTCGATTGCGAGGCCA------GACTGTTATTTGCTAGAGCCC-AGAGTTG
GTCGATTTG-----ATTCTAGCCTGACTTACAATGCACTGGTTCGTGTCCTACATGAAAATTAGTTTATCTGTAGTCGTC
TTGGTGTGCTTATGGTGGCCAGTAGTT-----TAGAATGACATGTCCGGTCTATTGTCTGTGATAAGTGAGTAAAATCAG
G-GAACTGG--------TGTTGTTTTCTGTTGTTATTTTACATGTCCTAGTGATTAATTGCTATACACAAGTATCATGAA
GCCAAGATGATGGCATGGCCAGCATATTTA-GATAGAAAAGAGAGATGGAACACATTTATACAAATGAAGACAGATGTTT
TTCGGTTTAGTTCTGCATTCAACATATTAGCCTTCTATTAGTTTGATGTACACAATGAGGGTTGTGATTACATTATTGTG
CTATGCTACTTGTGCACCATGTATGTGCTTGTGCTAGAAATTGCATAATTAAATTGGCATCCA---------TTTCTTAG
AGCACAAGATAAGGTGAGAAATATGTAAATGTGTTTATTGCTGTGGCCATTATCCTGTTCTTACTGCGGTGTGTTTGTTA
GGAGACTTAGAAGGACTATATATCTGGGTATCTAT----CTTCTTGCAGGAGGAAATAGGTC------------------
---------------------ACAAAAACCC-GCCATCCTCTGCTTGAGTACATCAAATGGATATAATTGGCCTTTTTGA
ATTGAATCTGTATTTTGATACATAATTTTATAGCTCGTTAATATGTTTGAATATGAGATGCCTAGTAAAGCAGATCTTAT
CATCTGTGCTGGCTTCTGATAATATCCCTAGTTTTAC-TAATGGCAATTATTATATTTCAAATCCAAGCTGGCTCCTGGC
TAATCTTACTAAAAACTATGTTCAGGTGCGGTTGTGGCGGCGAAGCCACAGATGGTTGCCATCCGTGAACGAGTTAGCAG
TGACGTGAAGAATGGTGCCAATCCTCCAGGTTCTGTTGGATGTTCGTCGAATGGATATAAC--TTTCCCTTTCTAAATAG
GATTAGCAAAATTACTTATTGGCGGA-------ATAGCTTGTTAATATGCTTGAGTATGC---GATAGATGGTAAAGC--
AGATATTATCATATGTGCTAACATGTGATAAAAGTCTTAGTTCTGCACTTCTGCTCATGCTAATTATTCTACTTCAA---
------ATTCA--TTATCTCTTGGCTAATCTGACT-----ACAAAACTGTCTCCAGTTGCGGTTGTGTCGGCGAAACCAC
AGTTGGTTGCTGGTCACGAACGAGTTAGCAGTGACATGAAGAATGGTGCCAACCCTCCAGGTTCTGTTGAAGGAAAGAGG
AAAATAGGCGCTGCAAATCCTGGTCCAGAAGATGCTGCCGAGCTTCTAAGGTAACAGATGGCCACTTTGTTTCACTAATA
CAACTACGAAATAACTGAACAAAAGCAC---------ATATATGGCTGAATTGTTTATACGATCTGTTGTCATTCCTGGT
ATATGCCTTATACAGGACTCCTCACTGTGTTTTTTTCTCTTCGAT--TTGTAGAATGTGCCTCCAGTGTGGTATACCAAA
GACCTATTCACATGCGCAAGGAATGGTATGCCCTGTTTGCAACGACAGACCGGTGCAGGCTAAAGAGCCAGAGAAGAAGA
AGGGTTCTGCTGTAAAAGACAAGGAGAAAGTGAAGAGGATGAGAGGGCAATCGTCACATGCATCGTGGAAGAGCGAAACT
GAGATGGCCCTGCGCCAACAATTTGACTGATTGGTGTCACCAGGAGTGCTGGTGCACTTAGTCTGT-AACTGTACACTAG
GTAGAATCCAGTATTGTTGCCTGGGTAAGCTCGTATCACTGCGGCCCGGCTGGTCCCAAGGTTTGTTTCTTGTATTTGCA
GTTGTCTGCCACACTCGGATTG---------------GTTTGATAAAATGTTTCCAGCGAAGTCAGGTTTA--AGTAAAT
TACTCGGGCCATCTTTTGCTTCACGGGACATTTTCCTGAATCTACCCGTAACTGAACTGTGTCTTGTGCGAAATCTCGGC
ATAATTCCCAGGAAGCATCCGAACTACAGAAGCCCTGAATACTGAACTGGTTGTGCTTCATGCTGTAATTAGGG-----G
ACATGGAAATCTTAGCTCATAGTCCAAAATTCTCATTGGATTCTTGCTAATCATAGAAGCCTGCAGTGTTGATCCAATTA
TGCATTTGATCAAGGGGAGGGATAGGTTGTTTTAGCAAATCTGGAGATGTTAAATGCGA-GGTGGGTCTAGTAATGTGGC
GGCATGTGGCATAACATGGCCAACATGAGAGCAACCCACGCACGGGGAAGAACAGATCCGGTCCTGCCGCGATGGGGATC
GTATTATTAGTACCCTGTGCCGTGCCGTTTACCAGGGCCT--TGTCTTCTGGGATTCCCTTGGGACACGTTCATGGTCTT
CAATGCTCATGTCTTTATTTGGTTTTGTTTGAGAGGTGTCCCTCATATTTGTTACTAGTACTACTATAAGAGCAACTCTA
ATGGGCGATCCATTTCGTCTTCCGCCATCCGTTTGGGTCGGCGCGGACACAAAAAGCGGTCCAACGCGCCGACTCAAACA
CGTGTCCGCTTTTCGTCCGTGGGCGACCCATTCCCGGCCCATTTTTAGCCGGATTTGCGTCGGCGCGGACACGAGACGGA
CGCGCGCGCTCGCCCTCTCCTCTTCCCGGTCCCGCTGGTCGGTGGCACATTGCCCTCTCCCCATCCAACATCGCCCCTCG
CCCGCCTCCTTCGTCG
>chr6B_149
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTTTCCTTCCAT
CTTTCTAATTTTCTTTTCTATTTTTCA-TTTTTGCAAACATATCTCAAATTCTTGAACATTTTTCGAGGTCCTTAACATT
TCTTAAAATCATAAACATTTCTCAACTTCATGAACACTTTTTGGAAAATCATGAACAATTTTCATATTTGTGAATAGT--
-TTCTGAAATTATGAACATTTTATGACACTCGTGAACATCGTTTTGAATTGGTGAATT---TTGATCGGCGAACATATTT
TTTAAAATTCATGAACATTTTTTTGTTTTTACAAACAATTTTTGAATCATTGCAGTTTTTTGAAATTTTGGAACAATTTT
TGAAATTCTTGTATGCTTTTTGAATTTGTTTTGAACTTTTTAAATTCACAAACATTTTTATAAATCCACTAAAGTTTTTG
AAAATGAC-AACATTTGTTCAAAATCATGTACATTTTTTGATTTCCTGAATATATTTTTTTAAAT-GTGAAAAATATTTT
GAATCTACGGACATTTTTTCGAAATTACAATCATTTTATGGTTTTCTGAATATTTTACAAAATTGTAAGCATTTTTTGAC
ATTTTATGATTTATGGAACATTTTCCTGTTTTATTTTTTTTAATAAAGAGCATTTTTGTAATCCCGAATTATTTGTAAAA
ATAAAGAACGAAAATAGTAGAA---AAAAAAGGAAAAGAGAAAAACGAAATGTACAAAACAGGGGACGGCCCGCCCCGCC
CGCACATGGGCTGGCCCAAAAATGCGTGCAGAGGGACCTCGCCGACCCT-------TCCGCCGCGCCGTAGAGAGTTTTG
CCAGATTTGCGGCCGCTCGAGCCAGGAAAGCCCAAGAACAACGGACACGGAGATGAGCTTAGCGCTTCTAGGGGGCTACT
CCTCCGCCGAGGACGACGACCCCGCCGCCGGCGCCGGCGTCGAGCTGAGCGACTCCGGCGACTCATCAGCCGAAGAGGCC
GGATCTGACGGAGACGAGAAGTCCGCTCCATCGAAGCCGGCTGCGAAGCCCCGCCCCCGCGTAAACCCTAGCCCCGGAGA
TGGGGACTCCTCGCTGCCCTCGGCGCTAGATGTCTTCGCCGAGATCTCCGGGCCCCCGGCTTTCCTCAACCGCAGAGTGG
CCCAGCCCGAGGAGGTCGGGGAGGCGCTCGGCGTGCTCGATCGTCGCTCCAACTCCAAGAGGAGAAAGCCGCCACCTCCC
GGTGAGACGTTTAAACTACTGCTAATTTTCCAGCAGATTATCGTGCTTTGATATTCGTGCTGGTTCAGAACTGGCTGTGT
TTTGACACTTACAGTGAGGATTTAGTGGTAGAACCATAATTCTATAGTTCAAATGTGGC-------------ACAGTCAG
CGTATTATATGAGGAGGTTTTGTTGTTGATGCTGTAGTGTCAACTTTCTTAGTGGTCTC--------TGGTTGCGGAATT
GCATTGCTATAGGGGCATAGGGTTAGTGTTTCAATTGCGTGGCCA------GACTGTTATTTGCAAGAGCCTG-GAGTTG
GTCGATTTG-----ATTCTAGCCTGACTTACAATGCACTGGTTCGTGTTGTACATGAAAATTAGTTTATCTGTAGTCGTC
TTGGTGTGCTTATGGTGCCCAGTAGTT-----TAGAATGGCATGTCCGGTCTATTGTCTGTGATAAGTGAGTGAAATCGG
GAGAACTGG--------TGTTGTTTTCTGTTGTTATTTTACATGTCCTAATGATTAATTGATATACACAAGTATCATGAA
GCCAAGATGATGGCATGGCCAGCATATTTAGGATAGAAAAGAGAGATGGAACCCAGTTATACAAATGAAGACAGATGTTT
TTTAGTTTAGTTCTGCATTCAACATATTAGCCTTCTGTTAGTTTGATGTACACAATGAGGGTTGTGATTACATTATTGTG
ATATGCTACTTGTGCACTATGTATGTGCTGGTGCTAGAAATTGCGTAATTGAATTGGCAATTTGGCATTCATTTCCCAGG
T-TGCAAGATAAGGCGAGAAATATGTAAATGTGTTTTGTGCTGTGACTATTATCCTGTTCTT-CTTCTGTGTGTTTGTTA
GAAGACTTAGAAGGACTATATATCTGGGTATCTAGCTTACTTCTTGCAGGAGGAAATAGGTC------------------
---------------------AACAAAAACCTGCCATCCTCTGCTTGAGTACATCAAATGGATATAATTGGCCATTTTGA
ATTGAATCTGTATTTTGATACATAATTTTATAGCTCGTTAATATGTTTGAAAATGAGATGCCTAGTAAAGCAGATCTTAT
CATCTGTGCTGGCTTCTGATAATATCCCTAGTTTCAC-TGATGGCAATTATTATATTTCAAATCCAAGTTGGCTCCTGGC
TAATCTTACTAAAAACTATGTTCAGGTGCGGTTGTGGCGGCGAAGCCACAGTTGGTTGCCATCCGTGAACGAGTTAGCAG
TGACGTGAAGAATGGTGCCAACCCTCCAGGTTCTGTTGGATGTTCATTGAATGGATATAAC--TTTCCCTTTTTAAATAG
GACCTGCAAAATTACTTATCTGCGGA-------ATACCTTGTTAATATGCTTGAGCATGC---GATAGATAGTAAAGC--
AGATATTATCATATGTGCTAACATGTGATAAAAGTCTTAGTTCTGCACTTATGCTCATGCTAATTATTCTACTTCAA---
------ATTCA--TTATCTCTTGGCTAATCTGACT-----ACAAAACTGTCTCCAGTTGCGGTTGTGTCGGCGAAACCAC
AGTTGGTTGCTGGTCACGAACGAGTTAGCAGTGACATGAAGAATGGTGCCAGCCCTCCAGGTTCTGTTGAAGGAAAGAGG
AAAATAGGCGCTGCAAATCCTGGTCCGGAAGATGCTGCCGAGCTTCTAAGGTAACAGACGGCCACTTTGTTTCATGAATA
CAACTACGAAATAACTAAACAAAAGCATACCGAGCACACATATGGCTGAATTGTTTATACAATCTGTTGTCATTCCTGGT
ATATGCCTTATACAGGACTCCTCACTGTGTTTTTTTCTCTTCAAT--TTGTAGAATGTGCCTCCAGTGTGGTATACCAAA
AACCTATTCACATGCGCAAGGAATGGTATGCCCTGTTTGCAACGACAGACCGGTGCAGGCTAAAGAGCCAGAGAAGAAGA
AGGGTTCTGCTGTGAAAGACAAGGAGAAAGTGAAGAGGATGAGAGGGCAATCGTCACATGCATCATGGAAGAGCGAAACT
GAGATGGCCCTGCGCCAACAATTCGACTGATTGGTGTCACCAGGACTGCTGGTGCACCCAATCTGTAAACTGTACACTAG
GTAGAATACAATCTCTTCGCCTGAGTAAGCTTGCACCACTGCGTCACGGTTGGTTCAAGA-TTTGTTTCTTGTATTTGCA
GTTCTCTGCGACACTCGGATTGGTCTGAT-AAGCTGTGTTCGTTAAAATGTTTCCAGTG---------------------
-ACTCGGGGCCTCTTTTGCTTCA-TGAGGCTTTTCCTGTATCTACCCGTAACTGAACCGTGCCCTGTGTGAAATTTTGGC
AGAATTCCAATGAAACTTGCGAACAATAGAAGCCCTGAATACTAAACTGGTTGTGCTTCATGCTATAATTAGGG-----G
ACATGGAAATCTTAGATAATAGTCCCAAATTCCCATTGGATTCTTGCTAATCATAGAAGCCTGCAGTGTTGAGCCAATTA
TGCATTTGATCAAGGGGAGGGATAGGCTGTTTTAGCAAATCTGGAGATGTTAAAGTGTGTGGTGGGTCTAGTAATGTGGC
GGCATGTGGCATAACATGGCCAACATGAGAGCAACCCACGGA----GAAGAACAGATCCAGCCCTGCCGCGATGGTGATC
GTATTATTAGTACCCTGTGCCGT-----TTACCAGGGCAT--TGTCTTCTGGGATTCCCTTGGGACACGTTCATGGTTTC
CATG----------------------------------------------------------------------------
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>chr6A_907
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-----------------------------------ACCTCGCCGCCCC--CTTTGCTCCGCCGCGCCGTAGAGAGTTCTG
CTAGATTTGCGGCTGCTCGAGCCAGGAAAGCCCAAGAACAACGCACACGGAGATGAGCTTAGCGCTTCTAGGGGGCTACT
CCTCCGCCGAGGACGACGACCCCGCCGCCGGCGCCGGCGCCGAGCTGAGCGACTCCGGCGACTCATCAGCCGAAGAGGCC
GGATCTGACGGAGACGAGAAGTCCGCTCCATCGAAGCCGGCTGCGAAGCCCCGCCCCCGCGTAAACCCTAGCCCCGGAGA
TGGGGACTCCTCGCTGCCCTCGGCGCTAGATGTCTTCGCCGAGATCTCCGGGCCCCCGGCTTTCCTCAACCGCAGGGTGG
CCCAGCCCGAGGAGGTCGGGGAGGCGCTCGGCGTGCTCGATCACCGCTCCGACTCCAAGAGGAGAAAGCCGCCACCTCCC
GGTGAGACGTTTAAACTACTGCTAATTTTCCAGCAGATTATCGTGCTT--------------GTTCAAAACTGGCTGTGT
TTGCCACTGACAAATGGGGATTTATTCGGCAAAACTTGAACCAGTTGTTCAGATATGGTACAACTAAGGAGTACAGTTAG
CGTATTACATGAGT---TTTTGTTGTTGTTGCTATAGTGTCAGCTTTCTTAGTGGTCTCGAGGCATTTGATTGTAGAATT
GCATCGCTATAAGGTTAGT-------TGTTTCAATTGCTTGGCAGTTCATGGACCGTTCGGTGCTAGAGCCTTAGAGTTT
GTCAATTCAATTGTATTCTAGAGTAACTTACAATGCACTGGTCTGTGTTCTACTTGGAAGTTAGTTAATCTGTAGTTGTG
TTGGTGTGTTTATGGTGCCTTGTTGTATGAACTATAAAGGCCTGTCCAGTCTTTTGTTTGTGATAAGTGACTAAGTGAGT
AGAATGAGGGAAGGTACTGATATTTTCTGTTTTTATTTTACATGTCATAATGCTTTGTTGCTATGAGCAAGTATCATGAA
GCCGAGATGGTGGCATAGCCAGCTTATGTAGGTTAGAAAAGAGTTATGGAACACACTTATGCAGATGAAGACATGTGTCT
TTCACTTTAGTTGAGCGTTCAACATATTAGCTCCCTTGCAGGTTGATGTACACGACGAGGGTTGCAGTCGCATTATTGGT
ATATGCTACTTGTGCACTATGTATGCACTGCGGCTAGAAATTGCATGTTTGAATTGGCATCCA---------TTCTCACA
T-CACAAAATAAGGCGAGAAGTGCATAGATGTGTTTTGGGCTGTAACTAGTAACCTGCTCTCACTTCAGTGTGTTTGCTA
GACCACTTAGAAGGACTATAGACCTGGGTATCTGGCTTACTTCTTGCACGAAAGATTTACATGCAACTATTTGTCCAAGC
AGTTTTTAACGGAATAGGTCGACAAAAACCT-GCAATACTCTGTTTGAGGACATCAAATGGATATAATTGGCCATTTTGA
ATTGGATCTGTACTGTTATACAGAATTTTATAGCTTGTAAATATGTTTGAATATGAGATGCATACTAAAGTAGATCTTAT
CATGTGTGTTGGCTTCTGATAATGTCCCTAGTTCCAC-TCATGCCAATTATTATATTTGGAATCCAAGTTGGCTGCTGGC
TAATCTGACTAAAAACTATGTTCAGGTGCGGTTGTGGCGGCGAAACCACAGATGGTTGCCATCCGTGAACGAGTTAGCAG
TGACGTGAAGAATGGTGCCAATCCTCCAGGTTCTGTTGAATGTTCATCTAAGTTACATTGTTGTGCCC--TTTTTAATAG
GATCGGCTCTGTTACTAGTCTGTGAAATATCATATAGCTAGTTAATATGCTTGAATATGG---GATAGATAGTAAAGC--
A--TCTTATCATATATGCTGGCATCTGATAAAATTCCTAGTACTGCACTTATGCTCATGCTAATTATTCTATTCCAA---
------ATTCATGTTATCTCCTGGCTAATCTGACT-----AGAAAACTATCTACAGTTGCTGTTGTGTCGGCGAAACCAC
AGTTGGTTGCTGGTCATGAACGAGTTACCAGTGACACGAAGAATGGTGCCAATCCTCCAGGTTCAGTTGAAGGAAAGAGA
AAAATAGGGGCTGCAAATCCTGGTCCAGAAGATGCTGCCGAGCTTCTAAGGTAACAAATGGCCACTTTGATTCATGAGTA
TAACTATGAACTAACTAATCAAAAGCATACCGAGCATATATATGGCTGAATTCTTTGTACAATCTGTTGTCATTCCTGGT
-TATGTCTTATATAGGGCTCCTGACAGCTTTTTTTAACTCTTCCGA-TTGTAGAATGTGCCTCCAGTGTGGTATACCAAA
GACCTATTCACACGCGCAAGGAATGGTATGCCCTGTTTGCAACGACAGACCGGTGCAGGCAAAAGAGCCGGAGAAGAAGA
AGGGTTCTGCTGTCAAAGACAAGGAGAAAGTGAAGAGGATGAGAGGGCAGTCGTCACATGCATCTTGGAAGAGTGAAACT
GAGATGGCTCTGCGGCAACAATTCGACTGACGGGTGTCACCGGGAGTGCTGGTGCACTCAGT-------CTGTACACTAG
GTAGAATCGAATCTCTTTGCTTGTTCCATTGCGTCGCGTGGCTTCCAGATTGCCATCGT--TTTGTTTCTTGTATTTGCA
GCTCTCTGACATGCACGGATTAAGTTTCGCAAGCTGTATACGTTAAAATGTTTTCCAGCCCAGCCATGTTTCGAGTAAGT
TACTCAGGGCCCC-TTTGCTTCA-GGGACATTTTCCTGTGCCCATCAGTAACTGGATGACCTATGAGATTCCCATGAGAT
TTTTGCGTATCATAGA-----------AGAATCCCTGAATACTGAACTGGTTGTGCTTCCTGCTGTTATTTGCATTGGTG
ACATGGAAATCTTAGCCCATGGTCCGAAATTCGCTTTGCATTCTTGCTAATCATAGAAGCCTCCAGTGTGGAGGCAATTA
T----------------------------------------------------------------GTCTAGTAATGTGGC
GGCATGTGGCATAACATGGCCAACATGGGAGCAACCCACGGA----GATGAACAGATCCAGTCCTGCCGCGATCCTGATC
GTATTATCAGTACTACTACATTTGTGCAGCTTACCACTAACCTGTCTTGTGGGATTCCCTTGGGACACGTTCATGGTCTC
CAATGCTTATGCCTTTATTTGTTCTTGT----------------------------------------------------
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>chr3D_2330
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------------------------------------------ATGCTTGAATATGAGATT----GTAAAGCAGATCTTAT
CAAATGGGCTAGCATCTGATTATATTCCTAACAATATCTAACACCAATTACTCTAGTTCAAATTCTTGCTTGCTCCTTGC
TAATCGAATTTAAAACTATATTCAGGTGCAGTCGTGGTGGCGAAACCACAGATGGTTGCCATTCGTGAACGAGTGAGCAG
TGACATGAAGAATGGTGCCAATCCTCCAGGTTCTGTCAAATGTTCATCTTATGGATATAGC--TGGCC--TTTTGAATTG
GATTGGCACTATTACTGAATTTCAACATACC--ATAGCTTGTTAGTATGCTTGAATATGATGAGATACATAGTAAAACAG
A--TCTAATGTTATGTGCTGGCATATGATAACATTCCTTCA--------TCTCCCCATTTCAATTATTCTACTGTATTTC
AAATACATGCATGTTGTCCCCTGGCTAATCTGACTCGACTAGAAAGCTATGTTCAGGCGCGGTTGTGAAGGTGAAACCAC
AGTTGGTTGCCACTCATGAAAGAGTGAGCAGTGACACAAATAGTGGTGCCGATCCTCCAGGTTCCATTGAAGGAAATAGT
AAAATGGGCGCTACAAATCCTGGTCCAGAAGATGCTGCCGATCTTTTAAGGTAACAACATGGTCAC---TTTCTCCAATA
TAACTATCACACAACTAAACAAAAAGCATACATCT-------TGGCTGACTTATTTACACCATCTACCGTCATACCTGGT
-TATGTCTTGTAGACCTCTAAACATTGTTTTCCTTTTTGCATTGTACTTGTAGAATGTGTCTCCAATGTGGTATACCAAA
GACCTATTCACACGCACAAGGTATGGTATGCCCTGTTTGCAATGATAGACCGGCGCAGACAAAAGAGCCAGAAAAGTAGA
AGGGTTCCGGTATCAAAGACAAGGAGAAAGTCAAGAGGATGAGAGGGCAATCGTCGCATGCATCATGGAAAAGCGAAACT
GAGATGGCTCTGCGGCAACAATTTGACTGATT------------------------------------------------
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>chrUn_2330
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------------------------------------------ATGCTTGAATATGAGATT----GTAAAGCAGATCTTAT
CAAATGGGCTAGCATCTGATTATATTCCTAACTATATTTAATGCCAATTACTGTAGTTCAAATTCTTGTTTGCTCCTTGC
TAATCGAATTCAAAACTATATTCAGGTGCAGTCGTGGTGGCGAAGCCACAGATGGTTGCCATTCGTGAACGAGTGAGCAG
TGACATGAAGAATGGTGCCAATCCTCCAGGTTCTGTCAAATGTTCATCTTATGGATATAGC--TGGCC--TTTTGAATTG
GATTGGCACTATTACTGAATTTCAACATACC--ATAGCTTGTTAGTATGCTTGAATATGATGAGATACATAGTAAAACAG
A--TCTAATCTTATGTGCTGGCATATGAGAACATTCCTTCA--------TCTGCTCATTTCAATTATTCTACTGTATTTC
AAATACATG----TTGTCCCCTGGCTAATCTGACTCGACTAGAAAGCTATGTTCA--------------GGCGAAACCAC
AGTTGGTTGCCACTCATGAAAGAGTGAGCAGTGACACAAACAGTGGTGCCGATCCTCCAGGTTCCATTGAAGGAAAGAGA
AAAATAGGCGCTACAAATCCTGGTCCAGAAGATGCTGCCGATCTTTTAAGGTAACAACATGGTCAC---TTT--------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-S-
----SSS------S---S-S-----SSS-------S-------S--------S-----------S------S--------
-S----------------------S----S---SSS-------------------SSS--------------------SS
S-----------S---------S------S---------S------------------SSS-------S-S---------
-S-S-------S-----------------S-SS------------------SS-S---------------------S---
-------------SS------SS-S----------------S----------S-------S--------S--SS------
S--SSSSSS-------S---------S--------S------------------------S----S--------S-----
--------S--S-------------S--------------S---S-S--S------S-------S------------S--
-S----------S-----------SSSSSS--S-S---------S-S----------------------------S----
-------------S--------SSS-----------------------------S-------------------------
---------------------S---------------------------S-----S------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------------------------------S---------------------------
----------S-------------------------S----------------S--------------------------
--------------------S------SS------------S--------------------------------------
--------------S---S-------------S------S-------------------------------S--------
------------------------------------------------S-------------------------------
-----------------S---------------------S--------------------------------------S-
-------------------------------------------------S------------------------------
-------------------------------------------------------S------------------------
---S--------------------------------S-------------------------------------------
S----------------S-----------S--------------------S-----------------------S-SSS-
SS------------S---------------------SS-------S-S-----------------S-S------------
-S--------------------------------S---------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--------------------------S-------
----S---------------S-------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------S----------S--------------------------------S-------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------S--------------------------------------------------S---------------
----------------------------------------------------------S---------------------
----------S-S-SS-------S-----------S-------S-----S----S---SSS-------------------
---S------------------------------------S-S--------------S-SSSS-SSSS--S-------S-
--------S-S------------S--------------S------------------S----------S-----S-S---
--------S-S-----S-S-----S-S-----------------------------------------------------
-------------------------S------S---------------------------------------S-------
--------------------------S---------------------------SSSSS---------------------
----------------------------------------S-SSSS-------------S---------------S----
------------------------SSSS----------S----------------------------------------S
-------S---S---------S-S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_32
------------TCTCGGTTTTTGTCCCCACC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>reverse_1633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GATTGCGAGGCCAGACTGTT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_48
---------------------------CCACCGATTTTTGGGAGCTTC--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_1800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACATGTCCGGTCTATTGTCTGT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_1729
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ACAATGCACTGGTTCGTGTC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_3536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTTGCCTGGGTAAGCTCGTA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
