>input_sequence_34579
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--------GCCTCCGCTGCT---------CACTCCGCCCACCCGCCCACCACAGTCGCCGACTGCCGTCTCCGGCGACTC
GCCCACTCGCAGGAAGCTCGGAGCCTCGCCGCGGCGGAGGCCAGAAGGAAGGGAATGAGGGCCGTGGTGCAGCGCGTCCT
CTCGGCCAGCGTCGAGGTGACCGCTTCCTCTTCAGTTCGCCACATCCGCTGTATCCTGCACGGAATCATTGGGAGAGGTG
GGCGCTGATTGGTCTTTGCGGGGGTAGCAGGTGGAAGGGCAAGTGGTGTCGGCGATCGGCCCGGGCCTCCTCGTCCTCGT
CGGCGTTCACGAGGCTGACACCAGCTCCGACGCCGACTACATGTAATGAACCCACCTCTGACCTC--TCCCTCCTAATCC
TCGGCACCCTCTCCCTCTCGCAGGGAGGTATTCCACCGGAATCTGGGTGAATGATGTGTAATTGATTACTCCTTTTGGTG
GATTGAGTGATTAAGATGACAATCGTTAGCGTATCAATAAATAGTGATGTGT-----ACTTGGTGCTGTATTCTGGTGCT
TGAAGGATTCTGTTGTGACACTCTGTAATTTGGAAAGTTTTGCTTAACTTTTGTGCAATTCATGTACCAGTGACTCACTT
GTCACCGTTACTTTTCTGACAACAGAGAATTTGTTTATACTGAAATGTCCAGTAAATATATCTCGTTGTGATGGTGTCTG
TTTCATGCTAACACTCTATTTCCGTAGCTGTCGGAAGGTCCTGAATATGAGGCTGTTTACTAATGAGAAGACTGGAAAAG
CATGGGATCAGAGCGTAAGCCTCAGAGTCATCTATAAGCAATTCTGCTTAGGAGAGCATTCAGCATGTTGATTACCCCCT
GAACTTTATTTTGCGTTTCACTTTCTGCAGGTTATGCAGCGGAACTTTGAAGTCCTGTTAGGTAATACAATGCAACTTGC
TCTCTCTACTTCTGTATCTGCAATGGCATAACCTTTAACAGTTGATATGTTGTTATTTATTCTTTTTCTAAGTTGTTATC
CTATTCAGTGAGCCAATTTACCTTATATGGAATCCTGAAGGGTAACAAGCCAGATTTCCATGTGGCTATGCCACCTGCGA
AAGCAAAACCTTTCTACGCTTCTTTGGTCGAGAAGTTTCAAAAGTCGTACAAAACTGATTCAGTTAAAGGTAATATGTTC
ATGCTTCTAATATTGCATAATACGTTTATGAAGTTGGCCATCTTGAGTGCTTCATCATCAAATCGATCTTCTTTACATAA
GTTCACCTGTATTCCTATTGAGGTTTTCACATGGTAACCGATGTATGGATACTTTCTCATATTTCTCAATGTTCCTGCAC
GGACTGTCCGACTGTTCCATTATAAAGTAAAAACTCAATTTACGGCATATTCTGTTATATTATTAGTAAGTTAAGAATAC
TTTCTTCTTGTTCAGATTTGTACTCCCCTGATACCTTGCCATGAGTATGCCAGTTTATTGATTATATGGTTTTCGCATAA
TACAATATTGAGGCTGCTATTTCTGTTTTTTTGCTATCTGTTCCTGTAC-----------------------------AT
TTGAAGGATCCCTGCTAGAAGTCACTGTCGCATTGAACCTATTCCTGACAATTGTCCCTACTTCATCTCTTCTTGGCAGA
TGGCATTTTTGGAGCAATGATGAAGGTGCCCCCCAGTAACAGATGCTATAACTGACTTGTCTCACATTACACTTTCCAGA
ATGCATGTCAATTGGGAACTTTTGCAGGTTTCATTGGTAAATGATGGCCCTGTAACAATGCAAGTTGACTCACCCTCACT
GCAAGGCTCTGGTCAGTCAAGGTGAGGTCTCCTAGCTTAAACCTACTGTGATGTTTTGTTGCAATCTTGCTGGTTATAAT
GTCATGCTCATATGAATTGACTGATATATTTATCTTGGTTCCTCTTGATTAGCAATGGTGATGCTGGTTTGGTAAGAGAG
GGTGAAGCAGCAGTACCCGATGAGACTCGTTAAATCCCTATGGCTGTTCCCGCAGTATCCTGCTTGGTTTTGGTGAACAT
CTGAGTTATATGGCTTGAGTGTAGAATTTTCAGTTTCTTTT-GAGGTTGTAGCACAAGGAATCCTAATATTCTGTTCCTA
TTAGAAATATCGAATATAACATGCATCTCCATCCGCATGCTGATATT-----TGATACTACTTGAGAAAATATTGGACAC
ATTTATTTGTGT---CATTGTTGATTTGAATGAACCATGACCCTTGTCATGCACTCTCAGTTTGATCCAACCGGTCTGAG
CGCTTTGCTATCGTGAGTCATCTCCAGTTTGTGCCGACATAGAATTTGTGCGCTCATAA---------------------
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>chr3D_1_TraesCS3D01G171500
GCTTGGCGAGAAGCGGACATCGATAAAGATTGTGGTCAGCGACGATGCAAGCAAAGGAGGAGACGCGGGAAGTTTGACAG
AAGATATGGTGAAGGTGGTGGAGAAGAACGCAGGGGAGCCGGGTAGATCACTGACAAGCACACTGAGCAGGAAGATCTCC
ATGAAGAGACGGGACGACAAGACGCCGGATGTCCCGGAGCAGGCCGATGCGTATGGACGTGAGTTGGTGGTGAATGAAGG
GCCTGTTACAATAGAGGGTAAGCCGATGGATGTCCATCCCACAACGGAAGATGGCAATGTGCAGGATGTTGCCGTGGAGG
CAGAAAA---TACTACTCGGGCTTCATAAATCAGAAGAGTGGATGCAAGATCAGCAATTGGTACAAAAATTCTC--TGTG
CTTGTTGTCCATATGGGTGAAGAATAAAGAACTTAGAGGTGGTTGTAGAATGTGACGAACAGCAGTGTGCTGTGCGCCTC
TGCACTCGTAG-CTAGGTGAGTGACCATGTTGTAAGATGGATTTCT-GGACAAATCAGGTGTAAAGATGTAAGATTCCCA
AACAATCTGTACGTATATATATACCCAGACTCATGTATGTTAA-TGGAATTAGTGCTATTTTCCACGTAAATTTCATGGC
CGTGAGATAAATTTGGTGATGATACTGTTATCTTTTACATGTTGTCAAAAGTCAAACACTATTTTTCTACTCCTAGAAAA
TACTCCCTCCGTCCCGTAATATAAGAGCGTTTTTGACACTAACGCTCTTATATTATGGGACTGAGGGAGTAGAAAATAGT
GTTTTGAC------------------------------------------------------------------------
----------------------------AACAAGTAAACAATACAATTGGATAT-TTCTAAGTCAAGCTCTAACAAGTGG
CAAAAAAATGCCAAGCTCTAACAGGAAAAAAAAATGTCAAGAGTGCAAATCCTGGCAAAGCCCGGTCCAAAATGTGATCC
TGGCAAAGCCC-------------------GGCCTGTTAGACCCAATAAATCATGGGCATTTTTACCGGCCCGTCGACCC
TCGCTGAGGCCTCCGCTGCT---------CACTCCGCCCACCCGCCCACCACAGTCGCCGACTGCCGTCTCCGGCGACTC
GCCCACTCGCAGGAAGCTCGGAGCCTCGCCGCGGCGGAGGCCAGAAGGAAGGGAATGAGGGCCGTGGTGCAGCGCGTCCT
CTCGGCCAGCGTCGAGGTGACCGCTTCCTCTTCAGTTCGCCACATCCGCTGTATCCTGCACGGAATCATTGGGAGAGGTG
GGCGCTGATTGGTCTTTGCGGGGGTAGCAGGTGGAAGGGCAAGTGGTGTCGGCGATCGGCCCGGGCCTCCTCGTCCTCGT
CGGCGTTCACGAGGCTGACACCAGCTCCGACGCCGACTACATGTAATGAACCCACCTCTGACCTC--TCCCTCCTAATCC
TCGGCACCCTCTCCCTCTCGCAGGGAGGTATTCCACCGGAATCTGGGTGAATGATGTGTAATTGATTACTCCTTTTGGTG
GATTGAGTGATTAAGATGACAATCGTTAGCGTATCAATAAATAGTGATGTGT-----ACTTGGTGCTGTATTCTGGTGCT
TGAAGGATTCTGTTGTGACACTCTGTAATTTGGAAAGTTTTGCTTAACTTTTGTGCAATTCATGTACCAGTGACTCACTT
GTCACCGTTACTTTTCTGACAACAGAGAATTTGTTTATACTGAAATGTCCAGTAAATATATCTCGTTGTGATGGTGTCTG
TTTCATGCTAACACTCTATTTCCGTAGCTGTCGGAAGGTCCTGAATATGAGGCTGTTTACTAATGAGAAGACTGGAAAAG
CATGGGATCAGAGCGTAAGCCTCAGAGTCATCTATAAGCAATTCTGCTTAGGAGAGCATTCAGCATGTTGATTACCCCCT
GAACTTTATTTTGCGTTTCACTTTCTGCAGGTTATGCAGCGGAACTTTGAAGTCCTGTTAGGTAATACAATGCAACTTGC
TCTCTCTACTTCTGTATCTGCAATGGCATAACCTTTAACAGTTGATATGTTGTTATTTATTCTTTTTCTAAGTTGTTATC
CTATTCAGTGAGCCAATTTACCTTATATGGAATCCTGAAGGGTAACAAGCCAGATTTCCATGTGGCTATGCCACCTGCGA
AAGCAAAACCTTTCTACGCTTCTTTGGTCGAGAAGTTTCAAAAGTCGTACAAAACTGATTCAGTTAAAGGTAATATGTTC
ATGCTTCTAATATTGCATAATACGTTTATGAAGTTGGCCATCTTGAGTGCTTCATCATCAAATCGATCTTCTTTACATAA
GTTCACCTGTATTCCTATTGAGGTTTTCACATGGTAACCGATGTATGGATACTTTCTCATATTTCTCAATGTTCCTGCAC
GGACTGTCCGACTGTTCCATTATAAAGTAAAAACTCAATTTACGGCATATTCTGTTATATTATTAGTAAGTTAAGAATAC
TTTCTTCTTGTTCAGATTTGTACTCCCCTGATACCTTGCCATGAGTATGCCAGTTTATTGATTATATGGTTTTCGCATAA
TACAATATTGAGGCTGCTATTTCTGTTTTTTTGCTATCTGTTCCTGTAC-----------------------------AT
TTGAAGGATCCCTGCTAGAAGTCACTGTCGCATTGAACCTATTCCTGACAATTGTCCCTACTTCATCTCTTCTTGGCAGA
TGGCATTTTTGGAGCAATGATGAAGGTGCCCCCCAGTAACAGATGCTATAACTGACTTGTCTCACATTACACTTTCCAGA
ATGCATGTCAATTGGGAACTTTTGCAGGTTTCATTGGTAAATGATGGCCCTGTAACAATGCAAGTTGACTCACCCTCACT
GCAAGGCTCTGGTCAGTCAAGGTGAGGTCTCCTAGCTTAAACCTACTGTGATGTTTTGTTGCAATCTTGCTGGTTATAAT
GTCATGCTCATATGAATTGACTGATATATTTATCTTGGTTCCTCTTGATTAGCAATGGTGATGCTGGTTTGGTAAGAGAG
GGTGAAGCAGCAGTACCCGATGAGACTCGTTAAATCCCTATGGCTGTTCCCGCAGTATCCTGCTTGGTTTTGGTGAACAT
CTGAGTTATATGGCTTGAGTGTAGAATTTTCAGTTTCTTTT-GAGGTTGTAGCACAAGGAATCCTAATATTCTGTTCCTA
TTAGAAATATCGAATATAACATGCATCTCCATCCGCATGCTGATATT-----TGATACTACTTGAGAAAATATTGGACAC
ATTTATTTGTGT---CATTGTTGATTTGAATGAACCATGACCCTTGTCATGCACTCTCAGTTTGATCCAACCGGTCTGAG
CGCTTTGCTATCGTGAGTCATCTCCAGTTTGTGCCGACATAGAATTTGTGCGCTCATAAGTTTTTTCTCGGTCACATTTG
GGGAGAAATCTTTATCAGTTTCACCAGGGCCCGTACTCAGGAGTTTAGATAATCTTATTGATTTCATCGAGTAGCAATAC
ATTAAGGCAATGCCTCTCCTCCTGTCCCTCCAAAGCTACTCTCTCCGTTCCTGTGTTTTTAGTCCCTATAGTATTTGTGA
CTTGTGAGGTGTACTACTCCAGTTCATGTGCTTTTCCTGAATGGATAATACTGAATGCAACTGAGGTTCTAGATTTGCAG
CAGGATGACCAGCTGCTTAAATCAACAAGTATAGCTTGAAAG--TCTCTAAACTGCATGAATCATCTTCTGGCTTCTAAT
TAAATG---AATCACCAGTTATACAAAGCTGAGTTTTTACACTTTGAACTTTAGATGTCCTGCTCA----------AGCA
GAAGAAG------------AAAAAAAAGAGTAAAGCTAGTATTCCCTTCGTCCCATAATATAAGAACGTTTTTGACACTA
TTATATTATGGGACGGAGGGAGTACTTTTTATTCCAAAACCAACACT---TAGGGCTTTTTCCTACTTAGGACATGAATT
TCATATGAAACGGTTGAATTTCT---------------------GCCTTCATCTTCTCCCATAGCCCACTGCTAGCTAGC
TGTGCGCTGAGCGTCACACCTGCAGTTGCAAAAACACAACGCATAGAAGAAGCCCATATA------TATATCCACCATGC
AATGCAAACCTCCACCTCAACGGAAG----AATGAGAAGCGTCCTCAACTTACCTCGCGCTGCTCTTCTCCCTGGGCTCC
GCCTGACCAGCTGCCCCGGGCCTCGGCGCGCCGGCGCCGTTCGCTCCGCCGGACGCGGCGTGGTGCCGGTCGCCCTGCGC
GCATCCGACCATCGTCGTCTGCGGCGCCGGAGCTGACACGTGAGGGCGCGCGGGCATCGCCCCGTTGCCATTGGCGGCGC
GGACGGCGCCGGCATTGCCGCTGTAGAAGCCGCCGGGCACGACTCCGGCGCTGGCCCCGTGCAGCACGCCGCCGGGGGGC
>chr3B_1
GCTTGGCGAGAAGCGGACATCGATAAAGATTGTCGTGAGCGACGATGCAACCAAAGGAGGAGACGCGGGAAGTTTGACAG
AAGACATGGCGAAGGTGGTGGAGAAGAACGCAGGGGAGCCGGGCAGATCACTGACAAGCACACTGAGCAGGAAGATCTCC
ATGAAGAGACGGGAC------------GATGTCCCTGAGCAGGCCGATGCTTATGGACGTGAGGTGGTGGTGAACGAAGG
GCCTGTTACAATAGAGGGTAAGCCGATGGATGTCCATCCGACAACGGAAGATGGCAATGTGCAGGATGTGGCCGTGGAAG
CAGAAAACACTACTACTCGGACTTCATAGATCAGA---GTAGATACAAGATCAGCAACTGGTAAAGATTTCTAGTATGTG
CTTGTTGTTCATATGG-TGAAGAATAAAG-ATTTAGAGGTGGTTGTAGAATGTGGCGAACAGCAGTGTGCTGTGCGCCGC
TGCACTCGTAGGCTAGGTGAGCGAGCATGTTGTAAGATGCATTTCTTGGACAAAACAGGTGTAAAGATGTAAGATTACCA
AACAATCTGTACGTA--TATATACCCACACTCATGTATGTT-A-TGGAATTAGTGTTATTTTCCACGTAAATTTCATGGC
AGTGAGATAAATTTGGTGATGATACTGT-ATCTTTTACATGTTGTCAAAA------CACTATTTTTCA------------
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--------------------------------------------------ATAT-TTTTAAGTCAAGCTCTAACAAGTGG
CAAAAAAAGT-CAAGCTCTAACAGGAAAAAAAAATGTCAAGAGTGCAAATC----------------------------C
TGGCAAAGCCC-------------------GGCCTGTTAGACCCAATAAATCATGGGCATTTTTACA-GCCCGTCGACCC
TCGCTGAGGCCTCCGCTGCT---------CGCTCCGCCCACCCGCCCACCACAGTCGCCGACTGCCGTCTCCGGCGACTC
GCCCACTAGCAGGAAGCTCGGAGCTACGCCGCGGCGGAGGCCAGAAGGAAGGGGATGAGGGCCGTGGTGCAGCGCGTCCT
CTCGGCCAGCGTCGAGGTGATCGCTTCCTCTTCAATTCGCCACATCCGCTGCATCCTGCACGGAATCATTGGGAGAGATG
GGCGCTGATTGGTCTTTGCGGGGGTCGCAGGTGGAAGGGCAAGTGGTTTCGGCGATCGGCCCGGGCCTCCTCGTCCTCGT
CGGCGTTCACGAGGCTGACACCAGCTCCGACGCCGACTACATGTAATGAACCCACCTCTGACCTT--TCCCTCCTAATCC
TCGGCACCCTCTCCCTCTCCCAGGGAGGTTTTCCACCGGAATCTCCGTGAATGATGTGTAATTGATTACTCCTTTTGGTG
GATTGAGTGATTAAGATGACAATCGTTAGCGTATCAATAAACAGTGTTAGTAACTAGACTTGGTGCTGTATTCTGGTGCT
TGAAGGATTCTGTTGTGAGA--CTGTAATTTGGAAAGTTTTGCTTAACTTATGTGCAATTCATGTACCAATGACTTGCTT
GTCACCGTTGCTTTTCTGACAACAGAGAATTTGTTTATACTGAAATGTCCAGTAAATATATCTCGCTGTGATGGTGTCTG
TTTCATGCTAACACTCTATTTCCGTAGCTGTCGGAAGGTCCTGAATATGAGGCTGTTTACTAATGAGAAGACTGGAAAAG
CATGGGATCAGAGTGTAAGCCTCAGAGTCATCTATAAGCAATTCTGCTTAGGAGAGCATTCAGCATGTTGATTACCTCCT
GAACATTATTTTACGTCTCACTTTCTTCAGGTTATGCAGCGGAACTTTGAAGTCCTGTTAGGTAATACAATGCAACTTGC
TCTCTCTACTTCTGTGTCTGCAATGGCGTAAGCTTTAACAGTTGATATGTTGTTATTTATTCTTTTTCTAAGCTGTTATC
CTATTCAGTGAGCCAATTTACCTTATATGGAATCCTGAAGGGTAGCAAGCCAGATTTCCATGTGGCTATGCCGCCTGCGA
AAGCAAAACCTTTCTACGCTTCTTTGGTTGAGAAGTTTCAAAAGTCGTACAAAACTGATTCAGTTAAAGGTAATATGTTC
ATGCTTCTAATATTGCATAATACATTTACGAAGTTGGCCATCTTGAGTGCTTCATTATCAAGTTGATCTTGTTTACAT-A
GTTCACCTGTATTCCTATTGAGGTTTTCACATGGTAACCGATGTATGGATGCTTTTTCATATTTCCCATTGTTCCTGCAC
GGACTGTCCGACTGTTCCATTATAAAGTA-AAACTCAATTTACGGCATATTCTGTTATATTA---GTAAGTTAAGAGTAC
TTTCTGCTTGTTCAGATTTGTAACCCCCTGATACCTTGCCATGAGTATGTCAGTTTATGGATTATATGATTTTCACATAA
TACAGTATCGAGGCTGCTATTTGTG--TTTTTGCTATCTGTTCCTGTACTCTTTTTTTTGCGATAACTATTCCTGCACAT
TTGAAGGA------------------------------CTATTCCTAACAATTGTCCCTACTTCAACTCTTCTTGGCAGA
TGGCATTTTTGGAGCAATGATGAAGGTGCCCCCCAGTAACAGATGCTATAACTGACTTGTCTCACATTACACTTTCCAGA
ATGCATGTCAATTGAGAACTTTTGCAGGTTTCATTGGTAAATGATGGCCCTGTAACAATGCAAGTTGACTCACCCTCCCT
GCAAGGCTCTGGTCAGTCAAGGTGAGGTCTCCTATCTTCAACCTACTGTGATGTTTTGTTGCAATCTTGCTGGTTATAAT
GTCATGCTCATACGAATTGACTGATATAGTTATCTTGGTTCATCTTGATTAGCAATGGTGATGCTGGTTTGGTAAGAGAC
GGTGAAGCAGCAGTACCCGATGAGACTCATTAAATCCCTATGGCTGTTTCCGCAGTATCCTGCTTGGTTTTGGTGAACAT
TTGAATCGTATGGCTTCATGGTAGAATCTTCAGTTTCTTTTTGATGTTGTAGCAGAAGGAAGCCTAATGTTCTATTCCTT
TTAGAAATATCAAATGTAACTTGCGTCTCCATCCAAATGTTGATATTTGATATGATACCACTCGAGAAAATATTGGACAC
ATTTATTTCTGTCATCATTGTTCATCTGAGTGAAGAATGACC-------------CTCAGTTTGATCCAATTAGTCTCAG
CGCTTTGCTATTGTTAGTCAGCTCTAGTTTGTGCCAACATAGAATTTG--------------------------------
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>chr3A_1
GCTTGGCGAGAAGCGGACATCGATAAAGATTGTCGTCAGCGACGATGCAAGCAAAGGAGGAGACGCGGGAAGCTTGACAG
AAGACATGGCGAAGGTGGTGGAGAAGAACGCAGGGGAGCCGGGTAGATCACTGACAAGCACACTGAGCAGGAAGATCTCC
ATGAAGAGACAGGACGACAAAACGTCGGATGTCCCGGGGCAGGCCGATGCTTATGGACGTGAGGTGGTGGTGAATGAAGG
GCCTGTTACAATCGAGGGTAAGCCGATGGATGTCCATCCGGCAACGGAAGATGGCAATGTGCAGGATGTTGCCGTGGAAG
CAGAAAA---TACTACTCGGACTTCATAAATCAA-----TAGATGCAAGATCAGCAATTGGTAAAGATTTTCTC--TGTG
CTTGTTGTTCATATGGGTGAAGAATAAGGAATTTAGAGGTGGTTGTAGAATGTGACG-ACAGCAGTGTGCTGTGCGCCTC
TGCACTCGTAG-CTAGGTGAGTGAGCATGTTGTAAGATGGATTTCTTGGACAAATCAGGTGTAAAGATGTAAGATTACCA
AACCATCTGTACGTA--TATATACCCAGACTCATGTATGTT-AATGGAATTAGTGCTGTTTCCCATGTAAATTTCATGAC
AGTGAGATAAATTTGGTGATGATACTGTG-TCTTTTACATGTTGTCAAAA------CACTAGTAAACAATACAACATGGG
TGGCAGCATGATCTAAGGATTGGTCCTCCTCCGTTTTTAGGCGTTATATGGACTCTACATGTTTTGTTATAATTCGCCTT
TTTATTTTTATTTTGTGTGAGAGGGTCCTATTTGGCTGTGTGCATCTTAGTTATGCAGAGCCCGGGTGTAATGCTTAAAT
CTTTTAAGTAATAAAGCGCCTCTTTTTGAAAAAGTAAACAATACAATTCAATATATTTTAAGTCAAGCTCTAATAAGTGG
CAAAAAAAGT-CAAGCTCTAACAGG--AAAAAAATGTCAAGAGTGCAAATC----------------------------C
TGGCAAAGCCCAGTCCTCCTGACAAAGTCCGGCCTGTTAGACCCAATAAATCATGGGCATTTTTACCGGCCCGTCGACCC
TCGCTGAGGCCTCCGCTGCTTCCGCTGCTCACTCCGCCCACCCGCCCACCA--GTCGCCGACTGCCGTCTCCGGCGACCC
GCCCACTCGCAGGAAGCTCGGAGCCTCGCCGCGGCGGAGGCCAGAAGGAAGGAGATGAGGGCCGTGGTGCAGCGCGTCCT
CTCGGCCAGCGTCGAGGTGATCGCTTCCCCTTCAGTTCGCCACATCCGCTGTATCCTGCACGGAATCATTGGGAGAGATG
GGCGCTGATTGGTCTTTGCGGGGGTCGCAGGTGGAAGGGCAAGTGGTGTCGGCGATCGGCCCGGGCCTCCTCGTCCTCGT
CGGCGTTCATGAGGCTGACACCAGCTCCGACGCCGAGTATATGTAATGAACCCACCTCTGACCTCTCTCCCTCCTAATCC
TCGGCACCCGCCCCCTCTCGCAGGGAGGTTTTCCACCGGAATCTGGGTGAATGATGTGTAATTGATCACTCCTTTTGGTG
GATTGAGTGATTAAGACGACAATCGTTAGCGTATCAATAAATAGTGCTAGTAACTAGACGTGGTGCTGTATTCTGGTGCT
TGAAGGATTCTGTTGTGACACTCTGTAATTTGGAAAGTTTTGCTTAACTTATGTGCAATTCATGCACCAATGACTCACTT
GTCACCGTTAATTTTCTGACAACAGAAAATTTGTTTATACTGAAATGTCCAGTAAATATATCTCACTGTGATGGTGTCCG
ATTTATGCTAACACTCTATTTCCGTAGCTGTCGGAAGGTCCTGAATACGAGGCTGTTTACTAATGAGAAGACTGGAAAAG
CATGGGATCAGAGCGTAAGCCTCAGAGTCATCTATAAGCAATTATGCATAGGAGAGCATTCAGCATGTTGATTACCTCCT
GAACTTTATTTTACGTTTCACTTTCTTCAGGTTATGCAGCAGAACTTTGAAGTCCTGTTAGGTAATACAATGCAACTTGC
CATCTCTACTTCCGATTCTGTAATGGCGTAACCTTTAACAATTG--ATGTTGTCAATTATTCTTTTTCTAAGATGTTATC
CTATTCAGTGAGTCAATTTACCTTATATGGAATCCTGAAGGGTAACAAGCCAGATTTCCATGTGGCTATGCCACCTGCGA
AAGCAAAACCTTTCTACGCTTCTTTGGTTGAGAAGTTTCAAAAGTCGTACAAAACTGATTCAGTTAAAGGTAATATGTTG
ATGCTTCTAATATTGCATAATACATTATTGAAGTTGGCCATCTTGGGTGCTTCATTATCAAATCGATCTTCTTTACATAA
GTTCACCTGTATTCGTATTGAGGTTTTCTCATGGTAACCGATGTATGGATGCTTTCTCATATTTCTCATTGTTCCTGCAC
GGACTGTCCGATTGTTTCATTATAAAGCAAAAACTCAA------------------------------------------
-TTCTGCTTGTTCAGATTTGTACTCCCCTGATGCCTTGCCATGAGTATGTCAGTTTATGAATTATATGATTTTCACATAA
TACAGTATTGAG-CTGCTATTTCTGT-TTTTTGCTATCTGTTCCTGTAC-----------------------------AT
TTGAAGGATCCCTGCTAGACGTCAATGTCGCATTGAACCTATTCCTAACAATTGTCCCTACTTCATCTCTTCTTGGCAGA
TGGCATTTTTGGAGCAATGATGAAGGTGCCCCCCAGTAACAGATGCTATAACTGACTTGTCTTACATTACATTTTCCAGA
ATGCATGTCAATTGGGAACTTTTGCAGGTTTCATTGGTAAATGATGGCCCTGTAACAATGCAAGTTGACTCACCCTCACT
GCAGGGCTCTGGTCAGTCAAGGTGAGGTCTCCTATCTTAAACCTACTGTGATGTTTTGTTGCAATCTTGCTGGTTATAAT
GTCATGCTCATACGAATTGACTGATATATTTATCTTGGTTCCTCTTGATTAGCAATGGTGATGCTGGTTTGGTAAGAGAG
GGTGAAGCAGCAGTACCCGATGAGACTCGTTAAATCCGTATGGCTGTTCCCGCAGTATCCCGCTTGGTTTTGGTGAACAT
CTGAGTTATATGGCTTCAGCGTAGAATTTTCAGTTTCTTTTTGAGGTTGTAGCACAAGGAATCCTAATATTTTGTTCCTA
TTAGAAATATCGAATATAACATGCATCACCATCCGCATGCTGATATT-----TGATACTACTTGAGAAAATACCGGACAC
ATTTATTTGTGT---CATTGTTGATTTGAATGAACCATGACCCTTGTCATGCACTCTGAGTTTGATCCAACCGGTCTGAG
CGCTTTTCTATTGTGAGTCATCTCCAGTTTGTGGCAACATAGAATTTGTGTAATCATTAGTCTTCCCTCGGTCACACTTA
GCGAGAAATCTTTATGAGTTCCACCAGGGCCTGTACTCACGAGTTTAGATGATCTTAGTGATTTCATCGAGTAGCAATAC
ATCAAAGCAACGCTTCTCCTTCTGTCCCTCC-AAGCTACTCTAACTGTTCCTGTGTTTTTAATCCCTA---TATTTGTGA
CTTGTGAGGCGTACTACTCCAGTTCATGTGCTTTTCCTGAATGGGTAATACTGAATGCAACTGAGGTTCTAGATTTGCAG
CAGGATGACCAGCTGCTTAAATCAACAAGCATAGCTTGAAATAATCTCTAAAATGCATGTATCATCTTCTGGCTTCTAAT
TAAATG---AATCACCAGTTATACAAAGCTGAGTTTTTACACTTTGAACTTTAGATATCCTGCTCA----------AGCA
GAAGAGAAACACACACACAAAAAAAAAGATGAAGTAAACC----------------------------------------
----------------------TACTTTTTATTCCAAAACCAATACT---TAGGGCTTGTTCCTACTTAGGACATGAATT
TCATAGGAAACAGTTGAATTTCTGTAGTCAGCCTAGGGTTTGGGGCCTTCATCTTCTCTCACTGCCCACTGCTAGCTAGC
TGTGCGCTGAGCGTCACACCTGCATTTACAAA-ACACGACGCGTAGAAGAAGCCC--------ATATATATCCACCATGC
AATGCAAACCTCCACCTCAACGGAAGAATTAATGAGAAGCGTCCTCAACTTACCTCGCGCTGCTCTTCTCCCTGGGCTCC
GCCTGACCAGCT---------------GCGCCGGTGCCGTTCGCTCCGCCGGACGCGGCGTGGTGGCGATCCCCCTGCGC
GTACCCGGCCATCGTCGTCTGCGGCGCCGGAGCTGACACGTGAGGCCGCGCGGGCATCGCCCCGTTGCCATTGGCGGCAC
GGACGGCGCCGGCATTGCCGCTGTAGAAGCCGCCGGGCACGACCCCGGCGCTGGCGCCGTGCAGCACGCCGCCGGGGGGC
>chr3B_3524
ATGTA---------------------------------------------------------------------------
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------------------------------CTTTCCCGAAATGGATAATAGTGAAAGAAACTGAAGTTCTAC--------
CAGGATGACCAGCTGCTTAAATCAACAAGCATGGCTTAGAACATTCTCTAAGATGCATGGGTCATCTTCTAGCTTCTAAT
TAAATGAAAAATCACCAGTTATACAAAGCTGGGGTTTTACACT--GAACTTTCGACATCCTGCTCACTGCTCAGGCAGAA
GAAAAGC------------ACAAAAAAGATGAAGCAACAGCGAAACCTATTT----------------------------
-------------------------TTTTTATTCCAGAAGCAATACTTGGTAGGGCTCGTTCCTAATTAGTACATGAATT
TCGTAAGAAACAGTTGAATTTCA---------------------GCCTTCATCTTCTCCCATAGCCCACTGCTAGCTAGC
CGTGCGCTGAGCGTCACACCTGCAGTTGCAAACACACAACGCATAGAAGAAGCCCATATATATATATATATCCACCATGC
AATGCAAACCTACACCTCAACGGAAGAATTAATGAGAAGCGTCCTCATCTTACCTCGCGCTGCTCTTCTCTCTGGGCTCC
GCCTGACCAGCTGCCCCGGGCCTCGGCGCGCCGGCGCCGTTCGCTCCGCCGGACGCGGCGTGGTGCCGGTCGCCCTGCGC
GTACCCGGCCATCGTCGTTTGCGGCGCCGGAGCTGACACGTGAGGCCGCGCGGGCATCGGCCCGTTGCCATTGGCAGCAC
GGACGGCGCCGGCATTGCCGCTGTAGAAGCCGCCGGGCACGACCCCGGTGCTGGCGCCGTGCAGCACGCCGCCGGGGGGC
>SNPs
---------------------------------S----------------------------------------------
----S----S----------------------------------------------------------------------
--------------------S---S-------------------------S------------S----------------
---------------------------------------S--------------------------------------S-
--------------------S--------------SSS--S----------------------S-S-SS-----------
--------S----------------------S------------------------------------------------
------------------------S---------------------------------------------------S---
---------------SS------------------------S--------------------------------------
S---------------------------S---------------------SSSSSS-----------S-SS-SSSSSSSS
-SSSSS-SSSS--SSSSS--SSSSSSS-S-SSS-SSSSSSSSSSSSSS-SS-S-S-SSSSS-SSS-SSS--SSSSSSSS-
S--S-SSS------------------------------------------------------------------------
------------------------------S-----------------SS-------S----------------------
--------SSS----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS-
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-----------------------------------------------------S--------------------------
--------------------S--------------------------------------------------------S--
-------------------------S------------------------------------------------------
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-----------------------------S--------------------------------------------------
----------------------------------------------S-SSSS----------------------------
--------------------------------------------------S------------------S----------
-----------------------------------------------------------------S--------------
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----------------------------------------------------------------------------S---
------------S-------------S-----------------------------------------------------
---------------S-----------S--------------------------------------------S-------
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----------------------------S---------------------------------------------------
-----------------------S-------------------------------S------------------------
--------------------------------------------------S-----------------S-----------
--------------------------------------------------------------SSS-----------S---
-----S-------------------------------------------S--------S---------S-----S-----
----S---------------------S-----------------------------------------------------
-------------------S----S---------------------S---------------------------------
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----------------------------------S---------------------------------------------
------------S-------------------------------------------------------------------
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----------------S--S------------------------------------------------------------
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-----------S-----------------------S--------------SSS----S---S--SS----------S--S
-S-------------S----S----------S-------S----------S------S----------------------
--S--S----S--S------S----------S----------SS-S---------------S------SSS---------
---------S----------------------------------------------------------------------
-----------------------------S-----------S----------S------S--------------------
--------------------------------------------------------S-----------------------
-----SS----------------------SS--SSSS-SSSSSSS-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------S--------------S---------------------
-----S-----S--------------------------------------------------------------------
--------------------------------S-----------------------------------------------
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-S-S---S-------------------------------------S--------------------------------S-
-------------------------------------------S-----------S------------------------
>forward_1038
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----------------------------------------------------------AGCCCGGTCCAAAATGTGAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_2013
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCGTTTCACTTTCTGCAGGT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_1386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GATTGGTCTTTGCGGGGGTA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_2740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTCACTGTCGCATTGAACCT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_2376
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGCCATCTTGAGTGCTTCATC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_3614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTCTCCTCCTGTCCCTCCAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
