>input_sequence_34553
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-ATGGGGTTCATCGGCGACCAGGTGGAGTCGATCCGCTCGATGCAGGTCCGCCAGGTGCTCGCGCAGATCATCAGCCTCG
GTGAC----GCCC-----GCTCTCCCATCCCTTCTTCTCTTGCTGTTCTTTTCTTTCATTCCGAGAAGTATTCCCCGACC
TATTTCGCGCTCAGATCAGTGGGGCTTCGCCGC-------------------GTTATCCCAGTAGTGTCTGGATGGTAAA
AGGCTATGCTGAGTATCCTCGTGGATCCTGA-------------------------------------------------
-----GATTCTTCGGCTCTTGATCTGGTTCGGCGAGCTGA---------GCTTCCCTGAAGAAGAATAGCAGGGAT-GTA
AACAGTACATGAGCGAACGAGCTGGGTGTGCCAGCATTAGAGAGGTGAATTGGGAATTAATGCCCTGCATCAATCATGGG
TGTGATGTC------CTCCTTTCAAAACC--------TACCAGCTAGTTGTCACAAATGCTG----------TTCCTTGC
TTCTGACAGATTAGATACTAGTTCATG--ATGTTTAGAAAAAGGGAG----AAAAGACGGGGTTTATGTCAGTTACTCTG
CTTCTG-TTAGTTAGATTGGGGTTTTTCTTTTCTGTAGTCCTAGATATTC----TGATTGGTTGATTGCAACATGGCTCT
TATACTGGAGCTTTGAATGTTTGCTGTGC--CAGGTATGATTGTTACGTCGGCATTGATCATATGGAAGGGGTTGATAGT
TGCGACTGGGAGTGAGTCCCCGGTGGTCGTGGTTCTTTCTGGTAGCATGGAGCCTGGATTCAAAAGGGTCAGTTAGCTGG
TTACACAATATTAGATTCGATTTGC-GTGCATGCTTTTCTCATCATTATGCATCTGAG----------------------
--------------------------------------------------------------------------------
--------------------------------GTGGATT--TAAGTGCTTCACTCACTGCTTGTATGAAAATATCCACTT
ATCTGTGATCAATCTAAATGTCAGAAGTTGGACGTGCAATACATAGATGGAC-----------ATTTGTGTATATTTATA
AGAATACAATGGTTTCCTAGAAATTCTACTGATTTGTGAAAGGTGGAAGATTGCCTTATTGTCTTGTCATGCACCATTAA
GATACTGGCCCCATTCATCCCAACATTTTCCTCT-AAGTTCCCTATTTGGCAAGTTGTATCAGTGCACATCATCTCGTTT
TAGTTTCACTTCAGATTCTATTTTGCTTCCTGTAATGTGCCATCATCTTTCTACATTGC-----TGTTGCTGAATGATTC
ATCGTATGCTTTGCAGGGTGATATCCTGTTTTTGCGCATGAGCAAAGAACCCATCCGTACTGGCGAAATAGTTGTTTTTA
ATGTTGATGTAAGTCCTAC-------T----------GCTTGTTAAGCTATAAATCAGTAGCTCAATCATGGATTCATCA
GCTGTTGGTGCTGTATTCAGCTTTACTGTGTGCTTCTACATGATCCTGACAACAATAAATTAACATCTGCTTGTTATGTA
TGT-AGGGCCGTGAAATTCCAATTGTTCACCGTGTGATTAAGGTAATTGGTATTTCAAGTCATCACATGAATAATCTTAT
CTA-----------------------------------------------------------------------------
------------------TGTTAGACCTGAAGTTTTTTTTTTCAATGCTATACATCTGAGTTTACTCTACTTTCTGTACA
GGTTCATGAACGCCAGGAAAGTGCTGAAGTTGACATCCTCACAAAAGGTAACCATCATATTCAGTTTCAGTGCCATCAG-
-TTTCTTCAGTGATTATAGTGCTCAATGGTAGAGCAGTTTGTGCAGT-CCTGCAATAATAATCAACATCT----AGCAAT
GTATAATTCACTGTAGATGCCACTACATGGTTCTATCTCAACTGGTAAACTGTCCTCCAGGT-GACAACAATTTTGAGGA
TGACCGACTGCTGTACGCACACGGTGAGCTGTGGCTTCAGCAGCATCACATCATGGGGCGGGCTGTAGGGTGAGTATCCA
TCACACTTGCA------TCACTTACCTGCCTTCATGCTGGTGAAAAGCTATTAAGCTTACTTCACTGCTATTTTGTTCTG
TGAACAGCTATCTTCCATACGTCGGGTGGGTTACCATTGTGATGACTGAGAAGCCAATCATCAAGGTATGCTTAGTCTTA
TTAAGTACTCCCTCCGTACCTAAATATATGACGTTTTGGTAATGTCATATATTTAAGTACGGAGGGAGTATATACTGACC
AACCCAGAGGTTACGATGGTTGTTCTATTCCATATGAGGG-AATGTGTCCATCAGATTTTGATAAAACTGCCGTCTGTTA
CTCTGGTTCATGGGAGATCCAAAATTGAAATAAGAAAATGCATGCAATCTGTACAATATAGCTGAAATGCTGAATTTATG
CAATAGCTGAAATGCTGATATATGATGCTCGTTGCTGCAGTACCTTCTGATTGGCGCGCTGGGCCTGCTGGTGATAATGT
CGAAAGACTGA---------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G466200
GAGGTCTGTTACTACATACTACATACTACCCGATTCAACAAATCCTTATACACACGCAATATAACCAAAGAGTTAGTTTA
CTCCTTTCTTTGAAAATAAAAGAGTTAGTGTA---GTCTTAGTGAACCAGACAAAAAAGT-TGCAGTGTATGTAAAAATA
TTAGCACATGTGTATCAACGACTTTGCTAGTTTTCTGCATATGTTTGAAGTTGTGGGAACAATGAAGTGATGGCGATGAA
GAAGTCATATGGATGGAGAGGGGACCTCACCACCGAACATGTGGGGGTGGAGGGGTTAGGACTCTAAGATCAGAGGTCCC
GCATGACGCTAACAAAGCACCTGCGAGATGATCTTGCCGACATAACTAGAAGCGGAGTCTGAAAGCAAACGGCGCACAAG
AGAAAAACTCGCGCTCTCAACTCTACAGTGATGCTGGTGATTGACTTGCATAGGCTACTATCAATATTTTTATGAACAAT
TCAGACTATGACAATTGGATAAATTAGAAAAAATAACATCAAAGAGCATGATAATATCATAGTCATCTGTATACATAGCT
TCTAGCTTCACATTTGATGTCTTGGCTTTTCTTCATGCTTATATAGCAATGAAACAACATGTATCAACCCAGAAAACTCG
AGGGGAAAAAAGGATAAATCTTACTATGAATG------------------------------------------------
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----------------------------------------------------------GGTTAATTCAAAATAGGCTCTG
AATGCCCAA---TAACCATAGCCAAGTTGGTGGTTTTTACTCCTCGAGTCATGGTTATAAATTTAAAATTTTGGGATATT
TTAGATGTGGTAGTATCTCGTTTGCATGTCACATA-AAAATTCAGATGTTTTG---TTCCTACTAATACTTCGGAGCTAG
GGCACCAGAACCCTCTGGCAGCCGTCCGATCCCAATCCGACGCACCAGAACAGGCCTGCCGACGTGTACCGAGCCGCGCC
GGGCCGGAAGCAAATACGGGGCATCCCCGGGGACTTCACCGGAAAAGTGGACAGCA---CT-CCGCCGAGCGCCGGGCGA
GATGGGGTTCATCGGCGACCAGGTGGAGTCGATCCGCTCGATGCAGGTCCGCCAGGTGCTCGCGCAGATCATCAGCCTCG
GTGAC----GCCC-----GCTCTCCCATCCCTTCTTCTCTTGCTGTTCTTTTCTTTCATTCCGAGAAGTATTCCCCGACC
TATTTCGCGCTCAGATCAGTGGGGCTTCGCCGC-------------------GTTATCCCAGTAGTGTCTGGATGGTAAA
AGGCTATGCTGAGTATCCTCGTGGATCCTGA-------------------------------------------------
-----GATTCTTCGGCTCTTGATCTGGTTCGGCGAGCTGA---------GCTTCCCTGAAGAAGAATAGCAGGGAT-GTA
AACAGTACATGAGCGAACGAGCTGGGTGTGCCAGCATTAGAGAGGTGAATTGGGAATTAATGCCCTGCATCAATCATGGG
TGTGATGTC------CTCCTTTCAAAACC--------TACCAGCTAGTTGTCACAAATGCTG----------TTCCTTGC
TTCTGACAGATTAGATACTAGTTCATG--ATGTTTAGAAAAAGGGAG----AAAAGACGGGGTTTATGTCAGTTACTCTG
CTTCTG-TTAGTTAGATTGGGGTTTTTCTTTTCTGTAGTCCTAGATATTC----TGATTGGTTGATTGCAACATGGCTCT
TATACTGGAGCTTTGAATGTTTGCTGTGC--CAGGTATGATTGTTACGTCGGCATTGATCATATGGAAGGGGTTGATAGT
TGCGACTGGGAGTGAGTCCCCGGTGGTCGTGGTTCTTTCTGGTAGCATGGAGCCTGGATTCAAAAGGGTCAGTTAGCTGG
TTACACAATATTAGATTCGATTTGC-GTGCATGCTTTTCTCATCATTATGCATCTGAG----------------------
--------------------------------------------------------------------------------
--------------------------------GTGGATT--TAAGTGCTTCACTCACTGCTTGTATGAAAATATCCACTT
ATCTGTGATCAATCTAAATGTCAGAAGTTGGACGTGCAATACATAGATGGAC-----------ATTTGTGTATATTTATA
AGAATACAATGGTTTCCTAGAAATTCTACTGATTTGTGAAAGGTGGAAGATTGCCTTATTGTCTTGTCATGCACCATTAA
GATACTGGCCCCATTCATCCCAACATTTTCCTCT-AAGTTCCCTATTTGGCAAGTTGTATCAGTGCACATCATCTCGTTT
TAGTTTCACTTCAGATTCTATTTTGCTTCCTGTAATGTGCCATCATCTTTCTACATTGC-----TGTTGCTGAATGATTC
ATCGTATGCTTTGCAGGGTGATATCCTGTTTTTGCGCATGAGCAAAGAACCCATCCGTACTGGCGAAATAGTTGTTTTTA
ATGTTGATGTAAGTCCTAC-------T----------GCTTGTTAAGCTATAAATCAGTAGCTCAATCATGGATTCATCA
GCTGTTGGTGCTGTATTCAGCTTTACTGTGTGCTTCTACATGATCCTGACAACAATAAATTAACATCTGCTTGTTATGTA
TGT-AGGGCCGTGAAATTCCAATTGTTCACCGTGTGATTAAGGTAATTGGTATTTCAAGTCATCACATGAATAATCTTAT
CTA-----------------------------------------------------------------------------
------------------TGTTAGACCTGAAGTTTTTTTTTTCAATGCTATACATCTGAGTTTACTCTACTTTCTGTACA
GGTTCATGAACGCCAGGAAAGTGCTGAAGTTGACATCCTCACAAAAGGTAACCATCATATTCAGTTTCAGTGCCATCAG-
-TTTCTTCAGTGATTATAGTGCTCAATGGTAGAGCAGTTTGTGCAGT-CCTGCAATAATAATCAACATCT----AGCAAT
GTATAATTCACTGTAGATGCCACTACATGGTTCTATCTCAACTGGTAAACTGTCCTCCAGGT-GACAACAATTTTGAGGA
TGACCGACTGCTGTACGCACACGGTGAGCTGTGGCTTCAGCAGCATCACATCATGGGGCGGGCTGTAGGGTGAGTATCCA
TCACACTTGCA------TCACTTACCTGCCTTCATGCTGGTGAAAAGCTATTAAGCTTACTTCACTGCTATTTTGTTCTG
TGAACAGCTATCTTCCATACGTCGGGTGGGTTACCATTGTGATGACTGAGAAGCCAATCATCAAGGTATGCTTAGTCTTA
TTAAGTACTCCCTCCGTACCTAAATATATGACGTTTTGGTAATGTCATATATTTAAGTACGGAGGGAGTATATACTGACC
AACCCAGAGGTTACGATGGTTGTTCTATTCCATATGAGGG-AATGTGTCCATCAGATTTTGATAAAACTGCCGTCTGTTA
CTCTGGTTCATGGGAGATCCAAAATTGAAATAAGAAAATGCATGCAATCTGTACAATATAGCTGAAATGCTGAATTTATG
CAATAGCTGAAATGCTGATATATGATGCTCGTTGCTGCAGTACCTTCTGATTGGCGCGCTGGGCCTGCTGGTGATAATGT
CGAAAGACTGAAGATTCTACCTTGTCACAGGGTCGTAATTTGGTCTTGTAGTAGCGCAGAAGTAACCGAGAGCTGAAGAT
GTTGCATCGTGTGTTGAATGGAAGTTTTCATGTG------------TCTGAATATGTATCTGGCCCGCCGAACAAGGTGT
TACGCAACACTCATCTTCTGATAGTCCTAATCCTAACTAATGATGTCAATCTGGTTATTGCATTGAATAAAAGTAAGCTT
TAGTTGCATTTTCGGAAAATAAAATTCTCTATACGACTCAGAAGCGAAAACTATCTCGATGGTGGTTGGACCCTGGATGT
GCCTCTGAAGTGTTGTATTT--TTGTGTTGCTGTTGAGATGAAATGGACTTCCTTGGTTTGTTGAAGAACCAACGTGAAA
AGG--CTTCTGGTGTAAATTGAACAAGATTAAACTTTCTTTACCGGT--------GCACCGAAGATGATTTCTACAATCA
GCCACACGGTGCCCATGAGGGAGACACCTGTAACACCTACCAAAGAGTCGAGCCGGGGTTGGTGCCGCCGGGTGGGCAGT
CTGCCCGGGGCAGCACCTCGCCATCCCCGGCTCACCTCCACCTCGCGCTCCATGAACGACTGAGACGAGT----------
----GGGCGGGCTGGTCATCGTGGTGTGCGCGAGTGCCACAATCTTTGGCGTCCACTCAGCTAGCTGGCATGCCTTGTTT
GTGTCGCCCGTGTCCTGCCTTGGCACTGAGATCGTCAAAGCTCTAGATTCGTGCGAGGGTTTGACAAAGTTGTGCTCCCC
TTCAAGGTGCTTCGTGGTGGGTCTTGGGTGTTAGCCGTATCTGCAAC---------------CTCATCTGATGTGGTGGT
GCAGTCTGCTCTGCAGCTCAGACCGGGCAGCTGCAAGGCTTGATGGCACGTGTTGGAGGCGTTCTGGATCAGGTGGAGGT
TGCTTTGAGCAGGTTTTCCCTTGTGCCTACTATGTTGCAGACCACTTCGACGTT-GTGTCCTCCTAGTGTGGCCAGTGTT
GGCTCCGTGGAGGATATGTGAGCGA
>chr5A_29
CCT----------------------------GATTCAACAGATCCTTATACGCACACAATATAACCAAAGAGTTAGTTTA
CTCCTTTTTTCGAAAACAAAAGAGGTAGTGTAGTCGTCTCACTGAACCAGACGAAAAAAGATGCAATGTTTGTAAAAACA
TTAGCACATGTGTATCAACAGCTTTGCTAGTTTTCTGCATATGTTTGGAGTCATGGGAACAATAGAGTGGTGGCGATGAA
GAAGTCATAGGGATGGAG-GGGGACCTCAGCACTGAACATGTGGGGGTGGAGGGGTCAGGACTATGAGATCGAAGGTGTA
GCATGACACTAACAAAGCACAGAGGAGATGACCTCGCTGACATAACCATGAGCGGAGTCTGAAAGCAAACAGTGCACAAG
AGAAAAACTCACAATCTCAAGACTATAGTGATGCTGGT---TGACTTGCATAGGCTCCTATCAATATTGTTATGAACAAT
TTAGACTACAAAAATTGGATATATTAGGAAAAA--ACATCAAAGAGCATGATAATATTAGAGTCTTCTGTATACATCACT
TCTAGTTTCATATTTGATGTCTTGGCTTTTCTCCATGCT--TATAGCAGTGAGACTACATGTGTCAACCCAGAAAACTCG
A--GGAGAAAAGGATAAATCTTACTATGAATGTTTTTTTAAAAATCTATTGGCACTTTATTGCATAATTGAAAAGGTTAA
ATCCTTCATTACATGCGGTAATAAAAAAAACCTGGAGGCTTATCCTCCCAGGAGAACTCTAACTGCATATCATACGCATA
TCTAGCTGTAAAGTGTGCCAAAGTATTTGCTTCCCTAGGATAGTATATGAATTTCACAGGTTAATTCAAAATAGGCTCCG
AATACCCAATAGTAACCATAGCCAAGTTGGTGGTTTTTATTCCTCGAGTCATGGTTATAAATTTAAATTTTTGGGATACT
TTAGATGTA----TATATCGTTTGCATGCCACATA-AGAATCCAGATGTTTTG---TTCCTACTAATGTTTGGGAGCTAG
CGCACCAGAACCCTCTGGCTGCCGTCCGATCCCAATCCGACGCACCAGAACAGGCCCGCCGACGTGTACCGAGCCTCGCC
GGGCCGGAAGCAAATACGGAGCATCCCCGGGGACTTCACCGGAAAAGTGGACAGCA---CTTCCGCCGAGCGCCGGGCAA
GATGGGGTTCATCGGCGACCAGGTGGAGGCGATCCGCTCGATGCAGGTCCGCCAGGTGCTCGCGCAGATCATCAGCCTCG
GTGGGTGATGCCC-----GCTCTCCCCCTGTATCTGT--TTCCTGCTTTTCTTCCTCATTCAGAGAGGT-TTCTCCGACC
TATTTCCCGCTCAGATCGGCGGGGTTGGAGGGTCAGGAGTTT-GCCGTCTGTGTGATCCCAGTAGATTTTCGATGGGAA-
------------GTAGCCTCGTGGACCCTGA-------------------------------------------------
-----GGGCCTTCGGCTCTTGATCTGGTTCCGCGAGCTGTGTTAAGTGGGCTTTCCTGAAGAAGAATAACAGGGGT-GTA
AACAGCACAGGAGCGATTGAGTTGGGTGTGCCAGCGTAGAGAAGTGAGCTGGGGAATTTCTGCCCTCCATGAATGATGAG
TCAAGTGTGATGTTTTTCCTTTTAAACTC--------TAGTCGCCAGTTGCTACTAGTGTTG----------TTCCTTGC
TTCAGACAGATTAGATACTAGCTCATG--ATATTTAG-------------------------------------------
-------------------------------------------GATATGCCGATTGATTGATTGATTGCAGCAGTGCTTT
TATACTGGAGCTCTGAATTTTTGCTGTGC--CAGGTATGATTGTTACGTCGGCATTGATCATATGGAAGGGGTTGATGGT
TGCGACTGGGAGTGAGTCCCCGGTGGTCGTAGTTCTTTCTGGTAGCATGGAGCCTGGCTTCAAAAGGGTCAGTTATCTAG
TTGCACAATATGAGAATCAGACTTGTATGCATGCTTTTCTTATCATTAGGCATTTTAG----------------------
--------------------------------------------------------------------------------
--------------------------------GTGGACATATAAGTGTTTCCTTGACTTCTTATATGAAAATATGCACTT
AAATGTGATCAGTCTAAATGTCAGAAGTTGCATGTGCAATACATAGATGGAC-----------ATTTCTGTATATTTATA
AGAATACAATGGTTTCCTAGAAATTCTACTGATTTGTGAAAGGTGGAAGATTGCCTTATTGTCTTGTCATGCACCATTAA
GATACTGGCCCCATTCATCTCAACATTTTCCTCT-AAGTTCCCTATTTGGCAAGTTGTATCAGTGCATATCATCTAGTTT
TAGTTTCACTTCAGATTCTATTTTGCTTCTTGTAATGTGCCATCATCTTTCTACATTGC-----TGTTGCTGAATGATTC
ATCATATGCTTTGCAGGGTGATATCCTGTTTTTGCGCATGAGTAAAGAACCCATCCGTACTGGAGAAATAGTTGTTTTTA
ATGTTGATGTAAGTCCTAC-------T----------GCTTGTTAAGCTATAAATCAGTAGCTCAATCATGGATTCGTCA
GCTGTTGGTGCTGTATTCAACTTTACTGTGTGCTTCTACATGATCCTGACAACAATAAATTAACGTCTGATTGTTATGTA
TGT-AGGGCCGTGAAATTCCAATTGTTCACCGTGTGATTAAGGTAATTGGTATTTGAAGTCATCACATGAATAATCCTAT
CTA-----------------------------------------------------------------------------
------------------TGTTAGATCTGAAGTTTCTTTTTTTCAATGC-TGCATCTGAATTTACTCTACTTTCTGTGCA
GGTTCATGAACGCCAGGAAAGTGCTGAAGTTGACATCCTCACAAAAGGTAACCATCATATTCAGTTTCGGTGCCATCAG-
-TTTCTTCAGTGATTATAGTGCTCAATGGTAGAGCAGTTTGTGCAGT-CCTGCAATAATAATCAACATCT----AGCAAT
GTATAATTCACAGTAGATGCCACTACATGGTTCTATCTCAACTGGTAAACTGTCCTCTAGGT-GACAACAATTTTGGGGA
TGACCGACTGCTGTACGCGCACGGTCAGCTGTGGCTTCAGCAGCACCACATCATGGGGCGGGCTGTAGGGTGCGTATCCA
TAACACTTGCA------TCACTTACCTGCCTTCATGCTGGTGAAAAGCTATTACGCTTACTTGACTGCTATTTTGTTCTG
TGAACAGCTATCTTCCATACGTTGGGTGGGTTACCATTGTGATGACTGAGAAGCCGATCATCAAGGTATGCTTAGTCTTA
TCA---------------------------------------------------------------AGTATATACTGACC
AACCCAGAGGTTGTGATGGTTGTTCTGTTCCATATGAAGG-AAGGTGTCCGTCAGATTTTGATAAAACTGCCGTCCGTTA
CTCTGGTTAATGGGAGATCTAAAATTGAAATAAGAAAATGCATGCAATCTGTACAGTATAGCTGAAATGCTGAATTTGTG
CAATAGCTGAAATGCTTATATATGATGCTCGTTGCTGCAGTACCTTCTGATTGGCGCACTGGGCCTGCTGGTGATAACGT
CGAAAGACTGAAGATTCCACCTTGTCACAGGGTCGTAGTCTGGTCTTGTAGTAGCGCAGAAGTAACCGACAGCTGAAGAT
GTTGCATCGTGTATTGAATGGAAGTTTTATGTGTCTG-------------------------------------------
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>chr5B_749
TTTAATT-------------------------------------------------------------------------
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-------------------------------------------------------------------ATTTTGGGACATT
TTAGATGTA----TATATCGTCTCCATGTCACACGGAAAATTCAGATGGCTTGCGATTGCGAGTTGTGTTTCGGAGCTCG
AGTACCACAACATT-TGGTTGCCGTCGGATCCCTATCCCACGCACCATAACAGGACCGCCGACGTGTACCGAGCCGCGCC
GGGCCGGAAGCAAATACGGAGCATCCCCGGGGACTTCACCGGAAAAGTGGACAGCAGCACT-CCGCGGAGCGCCGGGCGA
GATGGGGTTCATCGGCGACCAGGTGGAGTCGATCCGCTCGATGCAGGTCCGCCAGGTGCTCGCGCAGATCATCAGCCTCG
GTGAC----GCCC-----GCTCTCTCATCCCTTCTTCTCTTGCTGTTCTTTTCTTTCATTCCGAGAAGTATTCCCCGGCC
TATTTCGCGCTCAGATCGGTGGGGGTTATCCCAG----------------------TCCCAGTAGTGTCTCGATGGGAAA
AGGCTATGCTGAGTATCCTCGTGGATCCTGA-------------------------------------------------
-----GGTTCTTCGGCTCTTGATCTGGTTCGGCGAGCTGA---------GCTTCCCTGAAGAAGAGTAGCAGGGGACGTA
AACAGTACATGAGCGAACGAGTTGGGTGTGCCAGCATCAGAGAGGTGAATTGGGAATTTATGCCCTGCATGAATCATGGG
TGTGATGTC------TTCCTTTTAAAACCTACTGTAGTACCAGTTAGTTGTCACAAATGCTG----------TTCCTTGC
TTCTGACAGATTAGATACTAGTTCATG--ATATTTAATAGAAAAAGGAAAAAAAAAACGGGGTTTATATCAGTTACTCTG
CTTTCGTTTAGTTAGGTTGGGGTTTTTCTTTTCTGTAGTCCTAGATATGCTGATTGATTGATTGATTGCAACAGTGCTCT
TATACTGGAGCTCTGAATGTTTGCTGTGC--CAGGTATGATTGTTACGTCGGCATTGATCATATGGAAGGGGTTGATGGT
TGCGACTGGGAGTGAGTCCCCGGTGGTCGTGGTTCTTTCTGGTAGCATGGAGCCTGGATTCAAAAGGGTCAGTTACGTAG
TTGCACAATATGAGAATCGATTTAC-ATGCATGCGTTTCTCATCATTATGCATCTGAG----------------------
--------------------------------------------------------------------------------
--------------------------------GTGGATT--TAAGTGCTTCGCTCACTGCTTGTATGAAAACATCCACTT
ATCTGTGATCAATCTAAGTGTTAGAAGTTGCATGTGCAATACATAGATGGAC-----------ATTTCTGTATATTTATA
AGAATACAATGGTTTCCTAGAAATTCTACTGATTTGTGAAAGGTGGAAGATTGCCTCATTGTCCTGCCATGCACCATTAA
GATGCTGGCCCCATTCATCCCAACATTTTCCTCTTAAGTTCCCTATTTGGCAAGTTGTATCAGTGCATATCATCTAGTTT
TAGTTTCACTTCAGATTCTATTTTGCTTCCTGTAATGTGCCATAATCTTTCTACATTGC-----TGTTGCTGAATGATTC
ATCATATGCTTTGCAGGGTGATATCCTGTTTTTGCGCATGAGCAAAGAACCCATCCGTACTGGAGAAATAGTTGTTTTTA
ATGTTGATGTAAGTCCTAC-------T----------GCTTGTTAAGCTATAAATCAGTAGCTCAATCATGGATTCATCA
GCTGTTGGTGCTGTATTCAGCTTTACTTTGTGCTTCTACATGATCCTGACAACAATAAATTAAGTC---ATTGTTATGTA
TGT-AGGGCCGTGACATTCCAATTGTTCACCGTGTGATTAAGGTAATTGGTATTTCAAGTCATCACATGAATAATCTTAC
CTACTCCCTCTGTCCCAAAATAAGTGACTCAAGTTTGTACTAATTTTGTACTAAAGTTAGTACAAAGTTGAGTCACTTAT
TTTGGGACGGAGGGAGTATGTTAGATCTGAAGCCTTTTTTTTCCAATGC-TACATCTGAGTATACTCCACTTTCTGTACA
GGTTCATGAACGCCAGGAAAGTGCTGAAGTTGACATCCTCACGAAAGGTAACCATCATATTCAGTTACGGTGCCGTCAG-
-TTTCTTCAGTGATTATCATGCTCAATGGTAGAGCAGTTTGTGCAGT-CCTGCAGTAATAATCAACATCTAGCTAGCAAT
GTATAATTCAGAGTAGATGCCACTACATGGTTCTCTCTCAACTGGTAAACTGTCCTCCAGGT-GACAACAATTTTGGGGA
TGACCGACTGCTGTACGCACAAGGTCAGCTGTGGCTTCAGCAGCATCACATCATGGGGCGGGCTGTAGGGTGAGTATCCA
TCACACTTGCA------TCACTTACCTGCCTTCATGCTGGTGAAAAGCTATTAAGCTGACTTCACTGCTATTATGTTCTG
TGAACAGCTATCTTCCATACGTTGGGTGGGTTACCATTGTGATGACTGAGAAGCCGATCATCAAGGTATGCTTAGTCTTA
TTA---------------------------------------------------------------AGTATATACTGACC
AACCCAGAGGTTACGATGGTTGTTCTATCCCATATGAAAGAAAGGTGTCCATCAGATTTCGATAAAAGTGCCGTCTGTTA
CTCTGGTTAATGGGAGATCTAAAATTGAAATAAGAAAATGCATGCAATCTGTACAATATAGCTGAAATGCTGAATTTGTG
CAATAGCTGAAATGCTGATATATGATGCTCGTTGCTGCAGTACCTTCTGATCGGCGCGCTGGGCCTGCTGGTGATAACGT
CGAAAGACTGAAAATTCCACCTTGTCACAGGGTCGTAGTTTGGTCTTGTAGTAGCGCAGAAGTAACCGGCAGCTGAACAT
GTTGCATCGTGTATTGAATGGAAGTTTCCATGTATCTGTTTTGACTTCTGAATATGTATCTGGCCCGCCGCACAAGGTGT
TATGCAACACTCATCTTCTGATAGTCCTAA------CTAATGATATCAATCTGGTTATTGCATTGAATAAAAGTAAACTT
TAGTTGCATTTTCGGAAAATAAAATTCTATATACGACTCGGAAGCGAAAACTATCTCGATGGTGGTTGGACCCTGGATGT
ACCTCTGAGGTGTTGTATTTTCTTGTGTTGCTGTTGAGATGAAATGGACTTTCTTGATTTGTTGAAGAACCGACGTGAAG
GGCTTCTTGTGATGTAAATTGAACAACATTAAACTTTGTTTACCAAAGAGCGGGAGCACCGAAGGTGATCTCTACAATGA
GTCACACTTTGCC-------------------------------------------------------------------
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>chr1A_991
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-----------------------------------------------------------------------GCCGGGCGA
GATGGGGTTCATCGGCGACCAGGTGGAGTCGATCCGGTCGATGCAGGTCCGCCAGGTCGTCACGCAGATCATCAGCCTCG
GTGAC----GCCTCTTTTGCTCTCCCATCTCTTCTTCGTCTCCGCGTACTTGATAGATGTATTTTCGGTTGTATCGCGGC
---------------------GGAATTCACGGTTAGGGGTTTTACCCTGTGGACCAGTTTGGGTTTTGATCTGAAAGGCG
CGGTTCTG-----------TCGTGTTTTCGCGTGCCAGATTGCGGCAGAGAGGATCTGAAGAAAATAGCAATTTGGGGCA
TTAAGGCTTTTGGGGTTCTTGATCTGGTCCTAAGAGCTTTTTGGAGTTGTTTTCTTGGAAGAATCATACGCAC-----TG
AAATGTACACGAGCCACTCCATTGGAC-TGACAGCCTTAGAGGACTATACTGGGATTTTCGGCCGTGTTGTTTTTACCCT
ACTACTACTAGCGATA-------------------------------------------TTG----------CTCCTTGC
TTCTGAAAATCAGTTTATAGATTCGTGGTATATAGGGAAAGAGGGGAGCATGGCACCTTAC---T---------------
----TG-TTAGTTATTTTGGGGTTTTGCTGCTCT-------TAGATATTG----GTAATTGTTGGTTGCAACAATGTTCT
CACAGAGGAAGTCATGATTTTTTCCCCATGGCAGGTATGATTGTTACCTCAGCATTGATCATATGGAAGGGATTGATGGT
CGCGACAGGGAGCGAATCGCCAGTTGTGGTGGTTCTTTCTGGTAGCATGGAGCCTGGATTTAAAAGGGTTTGTTGCCTAC
TTATGCAGTGCGAGAACCCCTTAAATTTTGTA--------------TATGCATCTGATTATTAGATTCTTGAGGGCCATT
TTAGATACCCTCTAATTCGACTTTATCCTCTGGGTTAGACAGGAATTTTGATAAAATACTTTCTAAGTGAACGGACAGAG
TCGAATTAGAGGGTGCCCAAGCACACCCGCAAGTGGACATACACATTTGTTTTTGTAATTTGAAGTTAATA---------
---TTTGACCAATATGAAATCCCAAAATTGCATGTGCAACACATAAAGTGGATTATTCCCATGATTTACTCATATGAATA
AGAATATAATTGGCCTCCATTGGGTTGTAAGTGAAGGACTGTCCTAT------------------------CGCCTTTAA
GATCTTGTTCTAATTCATCCA---AGTTTCCTTTTGAGATTACTGTTACCACCATGCCATGTTCTCAGTT-------TTC
TGTTTTTATTCCAGTGCCATTTTTGCGTTCTGTAGGCTAAAATGGGTGTTATCATTTGCA-TAGTGTCCCTGTATCATTA
ATTATCTGTTTTGCAGGGTGATATTCTGTTTTTGCACATGAGCAAAGAACCTATCCGCACTGGAGAAATAGTTGTTTTTA
ATATTGATGTAAGTACTCAATTATTGT----------ACTTTGTAAGCCGTAAATTATTAGCTGGGTCATGAACCCATGA
TTTTGTCCTATATTTCATTG------TGTGTGCTTGTATTTGATGTTCAAGACACTAAGATTACATCTGGACATTTATTT
ATGCAGGGCCGTGAAATTCCAATTGTTCACCGTGTGATCAAGGTAATAAAATTGTGAAGTCATGTGATCAATCACCATAT
ATA-----------------------------------------------------------------------------
------------------TGCATATTAGACGTGCAAG-TTTTTTCATGC-TAGTTTTGAGTTTACTTTTCTCAATGTATA
GGTTCATGAACGGCAAGAAAGTGGAGAAGTTGACATCCTCACAAAAGGTATCTGTCATTTTCTGTTTGAATGCCATAGGT
TTTTCTTCAGTGAT----ATGCTGACTATCCAAGTAGTTTTTGCAATCCCGGCAATAATAGTCAACAGCT----AGCAAT
TTATAATTTACATTGGGTGCCACTGCGCTGTTGTATCTCAAGTGACAAACTGCCTTTTCAGGCGATAATAATTTTGGGGA
TGACCGACTTCTGTATGCACAAGGGCAGCTTTGGCTTCAGAAGCATCACATTATGGGGCGGGCTGTAGGGTGAGTGCCTA
GAAAATTTGTATCACATTCACATTTCTGCCTTCATACTGGTATAAAATAATTCAGCTGGCATTACCC---TTTTGTTACA
TGAACAGCTATCTACCATATGTTGGGTGGGTTACGATTGTGATGACTGAGAAGCCGATCATTAAGGTATGTTTATTCCTT
TTAAGTACT-----------------------------------------------------------------------
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>chr1B_991
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-----------------------------------------------------------------------GCCGGGCGA
GATGGGGTTCATCGGCGACCAGGTGGAGTCGATCCGGTCGATGCAGGTCCGCCAGGTCGTCACGCAGATCATCAGCCTCG
GTGAC----GTCTCTTTTGCTCTCCCATCTCTTCTTCGTCTCCGCGTTTTCGGTAGATGTATTTTCGGCTGTATCACGGC
---------------------GGGATTCAAAGTTAGGGGTTT-ACCCTGTGGACCAGTTTGGGTTTTGATCTGAAAGACG
CGGTTCTGTTTAGTAGTTTTCGTGTTTTCGCATGCCAGATTGAGGCAGGGAGGATCTAAAGAAAACAGTAATCTGGGGCA
TGAAGGCTTTGGGGGTTCTTGATCTGGTCATAAGAGCTTTATGAAGTTGTTTTCTTGGAAGAATCACACGCAC-----TG
AAATGTGCACGAGCCACTCCATTGGACTTGACAGCCTTAGAGGACTATACTGGGATTTCCGGCCGTGTTGTTTTTACCCT
ACT--TACTAGTGATA-------------------------------------------TTGCTTGTTGATTCTCCTTGC
TTCTGAAAATCAGTTTATAAATTCGTA--ATATAGGGAAAGAGGGGCAGGGCACCTCATTGTATT---------------
----TG-TTAGTTATTTTGGGGTTTTGCTGCTCT-------TAGATATTT----GTAATTGTTGATTGCAACAATGTTCT
CATAGGGGAATTCATTATTTTTTTCCCATGGCAGGTATGATTGTTACCTCAGCATTGATCATATGGAAGGGATTGATGGT
CGCGACAGGGAGCGAATCACCAGTTGTGGTGGTTCTTTCTGGTAGCATGGAGCCTGGATTTAAAAGGGTTTGTTGCCTAC
TTACACAGTGCGAGAACCCCTTAAATTTTGTA--------------TATGTATCTGATCATTAGATTCTTGAGGGCCATT
TTAGATACTCTCTAATTCGACTTTATCCTCTGGTTTAGACAGGAATTTTGATAAAATCCTTTCTAAGTGAACGGACAGAG
TCGAATTAGAGGGTACCCAAGCACGCGCGCAAGTGGACATACACATTCGTTTTTGTAATTTGAAGTTAATA---------
---TTTGACCAATATGAAATCCCAAAGTTGCATGTGCAACACATAAGGTGGATTATTCCCATGATTTTCTCGTATGAATA
AGAATATAATTGGCCTCCATTGGGTTGTAAGTGAAGGACTATCCTAT------------------------CGCCTTTAA
GATCTTGGTCTAATTCATCGA---AGTTTCCTTTTGAGATTACTGTTACCACCATGCCATGTTCTCAATT-------TTC
TGTTCTTATTCCAGTGCCATTCTTGCGTTCTGTAGTCTAAAATGGGTTTTATCATTTGCACTAGTGTCCCTGTATCTTTA
ATTATCTGTTTTGCAGGGTGATATTCTGTTTTTGCACATGAGCAAAGAACCTATCCGCACTGGAGAAATAGTTGTTTTTA
ATATTGACGTAAGTCCTAC-------TCAAGTATTGTACTTTGTAAGCCTTAAATTATTAGCTGGGTCATGAACCCATGA
TTTTGTCCTATATTTCATTG------TGTGTGCTTATATTTGATGTTCAAGACACTAAGATTACATTTGGACATTTATTT
ATGCAGGGCCGTGAAATTCCAATTGTTCACCGTGTGATCAAGGTAATAAAATTGTGAAGTAATGTGATCAATCACCATAT
ATA-----------------------------------------------------------------------------
------------------TACATATTAGACGTGTAAG-TCTTTTCGTGC-TTGTTTTGAGTTTACTTTTCTCTCTGTATA
GGTTCATGAACGGCAAGAAAGTGGAGAAGTTGATATCCTCACAAAAGGTATCTGTCATTTTCTGTTTGAATGCCATAGGT
TTTTCTTCAGTGAT----ATGCTGACTATCCAAGTAGTTTTTGCAATCCTGGCAATAATAGTCAACAGCT----AGCAAT
TTATAATTTACATTGGGTGCCACTGTGCTGCTGTATCTCAAGTGACGAACTGCCTTTTCAGGCGATAATAATTTTGGGGA
TGACCGACTTCTGTATGCACAAGGGCAGCTTTGGCTTCAGAAGCATCACATTATGGGGCGGGCTGTAGGGTGAGTGCCTA
GAAAATTTGTATCACATTCACATTTCTGCCTTCATACTGGTAAAAAATAATTCAGCTGGCATTACCC---TTTTGTTACA
TGAACAGCTATCTACCATATGTTGGGTGGGTTACGATTGTGATGACCGAGAAGCCGATCATTAAGGTATGTCTATTTCTT
TTATTAAGTACTGATGACCAGCCTATTCCTGAGTTGGAAGCACTGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGAAATGCTAATGTGTGATGCCTGTTGCTGCAGTACCTTCTGATTGGCGCGCTTGGCCTTCTTGTCATAACAT
CAAAAGAGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GAAGCTGTCGACCTT
AGCACA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr5B_3773
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--------GTGCCCATGAGCGAGACACCTGCAATACCTACCAAAGAGTCAAGCCGGGGCTGGTGCCGCCGGGTGGGCAGT
ACCTGTT------------GCCATCCCTGGCTCACCTCCACCTCGTGCTCCACGAACGACTGAGCCGACTGGGGGGATGG
GGTGGGGTGGGCTGGTTATC---GTGTGCGCGAGTGCCACAATCTTTGGCGTCCATGCAGCTAGCTGGCATGCCTTA-TT
GTGTCGCCCGTGTCCTGCCTCGGCACTGAGCATCGTCAAGCTCTGGCTTCGTGTGAGGGTCTGGCGAAGCTGTGCTCCCC
TCCAAGGTGCTTTGTCGTGGGTCTTGGGTGTTGGTCGTATCTGCAACCGTTGGTTCGGCAACCTCATCTGATGTGGCGGT
GTAGTCTGCTCTGCAGCTCAGACAGAGCAGCTGCAAGGCTTGATGGCGCGTGTTGGGAGCGTTCTGGATCAGGTGGAGGT
TGCTTCGAGTACGCTTTCCCTTGTGCCCACAATA-TGCATACCACTTCGACGTTCGTGTCTTCCTAGTGTTGGC------
-------------------------
>SNPs
SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSS---------S----------S---S------------------------
-------S--S-----S-------S--------------S-S----------S-----SS-----S---S--------S-
-------------------SS--------------------------S---SS----------SS----S----------
---------S--------S----------S---S----------------------S------S-S-----SS----SSS
-------S------------SSSS-------S--S--S--------S-SS--------------------S-S-------
----------S-SS------SS---S------------SSS---------------S-----------S-----------
-S------SS-S---------S-----S-----SS----------------------S-S----S-----------SS--
-----S----S---------------------S------SS-------S---S--S------S-----------------
-SS---S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---S-----------------------------------S----------------------------------------
--------SSSSS---S--------------------------------------------------SS-----------
S------------------S------------------------------------S-----------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S------S---S---S---------------------S---------------S-----S---
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------S-----
---------------------S------------------------------------S-----------S---------
---------------S------S---------------------------------------------------------
-------------------------------S-------------S---------S-----------S------------
---S-----------S---------------------------------------------------------SS-----
------------S----------------------------------------------------------------S--
---------------------------------------------------------------------------S--S-
-----------S---S-------S--S-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
------------------------------S-S----------------------------------S------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-------S----
--------------------------------------------------------------------------------
---S-----------------------------------------------------------S----------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-----------------S-SSSSS------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----------------------------------------------------------------S---
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------------------S------------------------
---------S-SSSS-SS-SSSSSSS-SSSSS---SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSS--------------
-------------------------------------S-----S------------------------------------
--------S----------S---------------------------------------------------------S--
-----------------------------------------------------------------------------S--
-----------------S-------------------S-------------------------------S----------
------------S--------------------S------------------------------------S---------
--S---------------------------SSSSSS--------S-------------------------------S---
----------------------------S----------S----------------------------------------
S-------S------------------------------------------S----S--------------S-------S
S-S-----S--S--------------S----------S------SSS-----------------S----S--------S-
-S-----S-----------S----------S--S---------------S--------S---------------------
SSSSSSSSSSSSSSSSSSS--------S-----------------S------S-----------S---S-----------
-------S--------S---SSS--------------------------------SS-------------------SS--
--------------------S---------SSSSSSS-------S-S------S------S--S-S---S----------
-S----------S--S----------------S-S-----------------------------------------S---
-S---------------------S-S---------------------S--------SS----------------------
-----S---S-S-S-------------S--S--SS----S--------------------S---------S-S-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_391
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------GCGGAGTCTGAAAGCAAACG---------
--------------------------------------------------------------------------------
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>reverse_2096
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---------------TTCGATTTGCGTGCATGCTT---------------------------------------------
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>forward_1389
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---------CTCAGATCAGTGGGGCTTCG---------------------------------------------------
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-------------------------
>reverse_3357
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----------------------------------------------------------------------------AGGA
TGACCGACTGCTGTAC----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>forward_2704
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--------------------------------------------AAGAACCCATCCGTACTGGC----------------
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-------------------------
>reverse_4526
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---------------------------------------------CGCTCCATGAACGACTGAGA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
