>input_sequence_34456
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-------------------------ATGCCGGGCAGCATCCGAATCTCAGGCAAGTCATCCCCCC--TCTCTCTTACGAT
TTGCA---------------------------------------------------------------------------
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---------------------------------------ATACTTCCATTCAAAACTCCAATATGAATCAAATAACATAT
TCTTGTGCTGGAGGCGAGAAC-TGACGGTGTTCGTTTC-TGCTTTTGCTGTGCAGACATTCAGCCACCGGTCACCGCACC
ACTCTTCTTGCAAGGTTTGTTGGTGTCTTCTGATTTCACTCTACTTTTTCCCTTGCTTCA----CACTTCCTGTTTGCTA
ATGTCGT---GTCA-TTTGGATGCAGTTAATGCAGGGAAAAAAGAGTACAGCGGAGACATAGGGCAGCATGGATTCTCCC
TGTAAGCCCATTCCCATATCGCCTTTCGCTGGTTTTTACTTGCGTTTGACCTTTCTAATTCCACAAAATGCCCATCGAGA
ATGTATCTCACACCAAGATGATA-TATTTGCAGTCCTGTTACATCGATTCGTGATAGCATGGTGATGATGCTGTACAATG
CAGACAAGGAATTGGTATCCAAGACAGGTTTATTTATTGTTGGTTCATTAAGCCTTTCTTCTGTTTATCATCTGCACACC
TGTCAATTAACGTGCGTCGCGATTTTCTGTAAACCAT---CAGAGGTGAAGACAAAGTTGATTGTTGAGTTGGGAACCAT
GGATGCTGTTTTTACTCTTGATAGTGGAGGGACAATTATTCTCCAGTTGCAGTTTTTTCTCAGCGATGAAGATCGCAAGC
GCATCCAAGAGATGGTGAGATGCTTCTTTTATGGTTTATTATGCTGTTTCCATGAAAGCTTGAAAATATATTTTTCT---
---TGAAAGGTTCAGTTTAAGTTAAAATATAAATTATATGTGTTTCTACTGTTTC-TTTTTATTCAGAGGAACTCTGTGA
TGAAAAGAAAGCAGCAAGAGCTGCTTGGGAATGGCGATGAACTTTATTTCCAAGGTAATTTGCTATAAATTATTA--TTT
T---AAACGCACATTTGGAATTCCATGGAACAAATTGAGCATTAG------------GTGTGTCTGTGTGTGTGCTCCCT
GAATGAAAGGTTCAGAAAATTAGTCACCAGTTAAAATGCAGTTGATATGAACACCATGCAGGAGCTCTGTTTCTTACAAA
TGGCTTTCAAATTTTATCAGAAGATGGCCCACTGCCTAAAGAGCATGCAGAAGATATCCCCGGCATCCCAAGCAAA----
--------------------------------GATGATCTGAAAAAGAGGGTCGTCTTCTCCGAAACAAGTGTAGATTCT
GACATGGTGGCTTCTAAGGACCCACCGTTGCAAATTGGTGGTACTACTTCGATGCTCGAAGGTCCCATCGACGCCGATTC
CAAGAAAGGACAGGGTAAACCAAAGAGTAGATCAAGCAGCGCGGTGAAGAAGATGATAAGTGCCTTCGAAAGCAGCTCCC
CACAGGTTCAGAACCCGTCCCTATACAGAGAAATGATCGCCTTGTTGCCTAAATTCT----------------GAAAGTG
CAGATAATATTACAGCGACTTCTCAAGTTTGCATGGCCTGCAGGGTCTGCCTTCGGTGCCAAGGATCAGATCAGAGAGCT
CGTTGGAAGAGATGCCGTCGGTTTCTTGTTCAGAGACTTCCACCAACCCTTCACGCAAGCCTCCTACTCCTGGTGCATCA
GTGGACGCTCCAGGCCGCACCCAGACAGGTCCCAGGCCAGGGAAGCAAGCCATGATCATTGGCAACAAGAAACCAAGCAC
ATCTTTTGGAAAGACCGGCCCGTTAAACACACAAGAAAGCCGGAGACGGAGCTCCAGGCAGAGCGCAGGAGCGAGCAACA
TGATTCGCCCGGAGAAGCGGTCAGCGGAAAAGCGTCGGCGTCGCTCCATCGGCACCTACTCATCGGAGCAGCAGGTGAAC
CCTTGTGGTGCGACGTCTATCGTCACGTGGATCAACCATCCGCACGTCTGCATCACCACTGCGAGCAGGCAGCTGAAAGG
CATTGTTGACGTCGAGCACCTGAATTTCGTGGAGAACTTGGGACAGGT---ATGAA-------------------AGCTA
AACTGGTGTGATACTTAGCTACATGC---ATGTTGGTGCTTTATTGCTTGTAGCTTCTCCTTGCTACTTGATTCGTCCTG
ATATGCACTGTCATGAACTTGTGGAGCAGGGCGCAGGTGACGGCGCGGCGCGGTGTCCTGACGGTTCCCCGGTGCTGAAT
GGGTGGTTGATTAACCAGGTAAGTAT----ACACTTACTGCATTGATCTCTCCTCTCGCTGTCGCCAAGGCTCGTTTATT
GAGAGTTTACCAGTGATATAACCT-GGTAATGAAATGGCAATGCAGGGTGTGCGTGGTGTGATAGTGATCATAGCCTGCG
GAGCTGTGTTTTTCAACAACAGGTGA------------------------------------------------------
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>chr1A_1_TraesCS1A01G439700
TGCTCGTCAGGACCTACTACAAGGACTCCCCGGCCAAGACCGCCGACGCTGCCTCTGCAACTGCCACGGCGTCCACC---
------------GCCGTCGAGTCCCAGGAGCCTGTTGCCGCCGTCGCGCCCGTCAAGCCGGTGCTTCCGCCGATCCCCGA
GGACGAGCAGCGCCGGGTCTACAAGTGGATGCTGGAGGAGAAGCGCAAGGTGAAGCCGCGCGACGCCGCAGAGAAGAAGA
GGCTTGACGACGAGAAGGCCCTGCTCAAGCAGATCATCCGCGCCGACACCCTCCCGGTGCTCTGAAACGAGAGAGCCTCA
CCACAC---------CACCACCAGACTGGACTGCTCTGCTGTTGGAATAATTAAGCTGGCACTGCCTGATTG--------
-----------ATGGTTTGATTGGA---TTTAGTTAGTTGATTGTGTCGTGTGGTACTCTTATTTTTATCCTCTTATAAG
GTACTCCTAGTTTGATGCCAAGAGGCCCATCTCGAGCTGCTTTATTTA-----TGTGGATGCAGGCAGACTGGTCTTGTT
GCTTGTGTTGCTCTATGCTTCTT-AAGATAAGGATTTATGTCG-----------------AACTCA--------------
--------TTGTTTTCTGTGGATGTGGATGCAAACTGATCCT--------------------------------------
----TTACTTTTCTCTCTTCTGTCTTCTTATTACAGTGATGTGTCGGCCAAGCCTATATATTTCCACGCCAGCAAAATTA
AAATACAATGCACTCTTGCTGAAACTTTCAGCACAAAAACTAAGAAACTGCAGCTGGCCCGGGGTACAATTTCGTTCATT
CAGTTAAATAACTGCAGCCCGGTGCAAGTGTGGTCAGTGTCTATATGAGTGTGAGTGTAGGTCTGTGAC------AGCAA
CATCAGGAGCCAAAATTGAGCTCCTCCAGTGGCCCCAGGAGGCCTTGCTGGTGGTTACAGATAGCCACACATCCA-AGCT
GCCCTGAATATCATCCACTAGCTCGGCTGCTGCTCTCCTTAAGGCT-----CAAGATCAGAATTGGAGGGCTTCTGGTGC
AGCACCAGGCAGTCGCTCAGCAAGGATGCCGGGCAGCATCCGAATCTCAGGCAAGTCATCCCCCC--TCTCTCTTACGAT
TTGCA---------------------------------------------------------------------------
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---------------------------------------ATACTTCCATTCAAAACTCCAATATGAATCAAATAACATAT
TCTTGTGCTGGAGGCGAGAAC-TGACGGTGTTCGTTTC-TGCTTTTGCTGTGCAGACATTCAGCCACCGGTCACCGCACC
ACTCTTCTTGCAAGGTTTGTTGGTGTCTTCTGATTTCACTCTACTTTTTCCCTTGCTTCA----CACTTCCTGTTTGCTA
ATGTCGT---GTCA-TTTGGATGCAGTTAATGCAGGGAAAAAAGAGTACAGCGGAGACATAGGGCAGCATGGATTCTCCC
TGTAAGCCCATTCCCATATCGCCTTTCGCTGGTTTTTACTTGCGTTTGACCTTTCTAATTCCACAAAATGCCCATCGAGA
ATGTATCTCACACCAAGATGATA-TATTTGCAGTCCTGTTACATCGATTCGTGATAGCATGGTGATGATGCTGTACAATG
CAGACAAGGAATTGGTATCCAAGACAGGTTTATTTATTGTTGGTTCATTAAGCCTTTCTTCTGTTTATCATCTGCACACC
TGTCAATTAACGTGCGTCGCGATTTTCTGTAAACCAT---CAGAGGTGAAGACAAAGTTGATTGTTGAGTTGGGAACCAT
GGATGCTGTTTTTACTCTTGATAGTGGAGGGACAATTATTCTCCAGTTGCAGTTTTTTCTCAGCGATGAAGATCGCAAGC
GCATCCAAGAGATGGTGAGATGCTTCTTTTATGGTTTATTATGCTGTTTCCATGAAAGCTTGAAAATATATTTTTCT---
---TGAAAGGTTCAGTTTAAGTTAAAATATAAATTATATGTGTTTCTACTGTTTC-TTTTTATTCAGAGGAACTCTGTGA
TGAAAAGAAAGCAGCAAGAGCTGCTTGGGAATGGCGATGAACTTTATTTCCAAGGTAATTTGCTATAAATTATTA--TTT
T---AAACGCACATTTGGAATTCCATGGAACAAATTGAGCATTAG------------GTGTGTCTGTGTGTGTGCTCCCT
GAATGAAAGGTTCAGAAAATTAGTCACCAGTTAAAATGCAGTTGATATGAACACCATGCAGGAGCTCTGTTTCTTACAAA
TGGCTTTCAAATTTTATCAGAAGATGGCCCACTGCCTAAAGAGCATGCAGAAGATATCCCCGGCATCCCAAGCAAA----
--------------------------------GATGATCTGAAAAAGAGGGTCGTCTTCTCCGAAACAAGTGTAGATTCT
GACATGGTGGCTTCTAAGGACCCACCGTTGCAAATTGGTGGTACTACTTCGATGCTCGAAGGTCCCATCGACGCCGATTC
CAAGAAAGGACAGGGTAAACCAAAGAGTAGATCAAGCAGCGCGGTGAAGAAGATGATAAGTGCCTTCGAAAGCAGCTCCC
CACAGGTTCAGAACCCGTCCCTATACAGAGAAATGATCGCCTTGTTGCCTAAATTCT----------------GAAAGTG
CAGATAATATTACAGCGACTTCTCAAGTTTGCATGGCCTGCAGGGTCTGCCTTCGGTGCCAAGGATCAGATCAGAGAGCT
CGTTGGAAGAGATGCCGTCGGTTTCTTGTTCAGAGACTTCCACCAACCCTTCACGCAAGCCTCCTACTCCTGGTGCATCA
GTGGACGCTCCAGGCCGCACCCAGACAGGTCCCAGGCCAGGGAAGCAAGCCATGATCATTGGCAACAAGAAACCAAGCAC
ATCTTTTGGAAAGACCGGCCCGTTAAACACACAAGAAAGCCGGAGACGGAGCTCCAGGCAGAGCGCAGGAGCGAGCAACA
TGATTCGCCCGGAGAAGCGGTCAGCGGAAAAGCGTCGGCGTCGCTCCATCGGCACCTACTCATCGGAGCAGCAGGTGAAC
CCTTGTGGTGCGACGTCTATCGTCACGTGGATCAACCATCCGCACGTCTGCATCACCACTGCGAGCAGGCAGCTGAAAGG
CATTGTTGACGTCGAGCACCTGAATTTCGTGGAGAACTTGGGACAGGT---ATGAA-------------------AGCTA
AACTGGTGTGATACTTAGCTACATGC---ATGTTGGTGCTTTATTGCTTGTAGCTTCTCCTTGCTACTTGATTCGTCCTG
ATATGCACTGTCATGAACTTGTGGAGCAGGGCGCAGGTGACGGCGCGGCGCGGTGTCCTGACGGTTCCCCGGTGCTGAAT
GGGTGGTTGATTAACCAGGTAAGTAT----ACACTTACTGCATTGATCTCTCCTCTCGCTGTCGCCAAGGCTCGTTTATT
GAGAGTTTACCAGTGATATAACCT-GGTAATGAAATGGCAATGCAGGGTGTGCGTGGTGTGATAGTGATCATAGCCTGCG
GAGCTGTGTTTTTCAACAACAGGTGAAGAAGAGGACGAGTGCAGCTGATAACTTG-----TAACTAATACGTATCAGAAG
CTGCGACCGATGAGGCATTGAGATGCAGTGCAATTTGTTTGTGTCAATGGCTTGCTGTTGCTTCATACTCCACCATGATG
ACTCGCAGTTCATGTCAGAAGCTGCGATGAGACGAGTGTAGAGTATCATATGTGTAAATCATTCTGGGATGATGATGAAC
TGTCGGGTTCTAGCGCGGCCTTCTGCCACCGCGTCCCTTTGGCCGTATGCCGTGCTTTGGGATGTCTGTCCAGTATTTGG
ACTTTGTGGTCAGCCCGGATGGTCCCGAGTCGCCTCGGTTGGTGCAAAAGACGG------------GGAGCTCTGAAACG
AGGGAGGCTCACCACCACCAGACTG---GACTGCTGCAGAATAATGAAGTTGTCACTGCTTGATTGA-----TGGTTCCT
CTCTGCTAAGAGAATGGCTTGATTGGACTCTTTAGTTAGTGCGATTGTGTCGTACGTGTGCTACTGTTATTACCATCTTA
TAAGTTAGTG--------AGAGGCCCATCTCGAGCTGTTTTATTTATGTGGATTCCTTGCTTTTGTTGCTCTATGCTTCT
TCGAGATAAGGATTTGGTTTGTCTCAAG-CAAGATGGTCAACTGATTGATTGATTGACTCATTCATGTGTCACAAGTCTT
TTGTTGTTGTCTCCGGATGCAAACTACTAAG---------------------------------------TAGTAGTTCT
CTGAAGCTTGAGTTGTTTCCTGTGGGGTTCATATGATTCAGCATTCACACATTTATTTTCCTTTATATAGTTTTCTCTGC
TCGGTGTTCTTACAGTGATGTGCCAGCCCAGCCTATCTATTCCCATGTCACCAAAATG-TAAGTCCAATGCAGCATTGCT
GAAACTTTGAGTACACAAAAGAGAGATAGAGAGAGCTACTGCAACAATTTCA----------------------------
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------------------------------------------------------------------------GAATTGGA
GGGCTTCAGTGCACCGCAGAGCAGGCACTCAATTGATGCCAGGCAGCATCCGAGTCTCAGGCGAGTCATCCCTCTCTTAT
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>chr1D_1
TGCTCGTCAGGACCTACTACAAGGATTCCCCGGCCAAGACCGCCGACTCTGCCGCTGCCACTGCAACGGCGTCGACCCCG
TCT------GCCACCGCCGAGTCCCCTGAGCCGCCGGTGGCAACGCCTGCCAAGGTGCTG------CCGCCGATCCCCGA
GGACGAGCAGCGCCGGGTCTACAAGTGGATGCTGGAGGAGAAGCGCAAGGTGAAGCCACGCGACGCCGCCGAGAAGAAGA
GGCTCGACGACGACAAGGCCCTGCTCAAGCAGATCATCCGCGCCGACACCCTCCCGGTGCTCTGAGACCGGATGAA----
----TGGCTGAAGCTCACCACCAGATTGATCGATGTTGCTGTTTGCGTCTGTCATTGCTTTGCCTCATGTCTCT--TCTC
TGCTAAAGAGAATGGTTTGGTTGGACTCTTTAGTTAGTTGATTGTGTCGTGTGGTACTGTTATTATTATCATCTTA--TA
AGT----TAGTTCGACGCCGAGATGCCCATCTCGAGCTGCTTTATTTA-----TGTGGAT---------------TTCTT
GCTTGTGTTGCTCTATGCTTCTTCAAGATAAGGATTTGGTTCGTCTCGAACAAGATATTCAACTGACTGATTCATGTGTC
ACAAGTTTTTGTTTTCTGTGGTTGTGGATGCAAACTGATTCTTTGCAGCGAGCTTGCGGTGTTTCCTGTGGGTTTACCCT
TCCTTTACTTTTCTCTCTTCTGTCTTCTTA---CATTGATGCCTCGGCCCAGCCTATATATTTCCTTGCCAGCAAAATTA
AAATACAATGCACTCATGCTGAAACTTTCAGTACAAAAACTAAGAAACTGCAGCTGGCCCGGGGCACAATTTCGTCCATT
CAGTTAAATACTTGCAGCCCGGTGTAAGT---GTCAGTGTCTATACGAGTGTGAATGTAGTAGGT---CTGTGATAGCAA
CATCAGGAGCCAAAATTGAGCTCCTCCAGTGGCCCCAGGAGGCCTGGCTGGTGGTTACAGATAGCCACACATCCA-AGCT
GCCCTGAATAACATCCACTAGCTCGGCTGCTGCTCCTCCTTCCCCATTCTCCAATATCAGAATTGGAGGGCTTCTGGTGC
AGCGCCGCGCTCA------------ATGCCGGGCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTTTATCCAAAACTTCAATATGAATCGAATAACATAC
TGTTGTTCTGGAGGCGAGAAC-TGACGGTGTTCGTTTTTTGATTTTGCTGTGCAGACATTCGACCACCGGTCACAGCTCC
ACTCTTCTTGCAAGGTTTGTTGGTGTCTTCTGATTTCACTCTACTTTTCCCGTTACATCGG------TTGCTGTTTGCGA
ATGTCGT---ATCATTTTGGATGCAGTTAATGTAGGGAAAAAAGAGTACATCGGAGACATAGGGCAAGATGGATTCTCCC
TGTAATCCCATTCCCGTACCACCTTTCACTTGTTTTTACTTGCGTTTTACCTTTCTAATTCCACAAAATGCGCATCGAGA
ATGTATCTCACACCAAGATGATA-TATGTGCAGTCCTGTTACATCGATTCGTGATAGCATGGTGATGACGCTGTACAATG
CAGACAAGGAATTGGTATCCAAAACAGGTTTAT---TTGTTGGTTCATTAAGCTTTTCTTCTGTTTATCATCTGCACACC
TGTCAGTTAACATGCCTCACTA-TTTTCTGTAAATCATCACAGAGGTGAAGACAAAGTTGATTGTTGAGTTGGGAACAAT
GGATGTTATTTTTACTCTTGATAGTGGAGGGACAATTATTCTCCAGTTGCAGTTTCTTCTCAGTGATGAAGATCGCAAGC
GCATCCAAGAGATGGTGAGATGCTTCTTTTATGAT---TTATGCTATTTCCATGAAAGCTTGAAAAATTATTTTTCT---
---TGAAAGGTTCAGTTTAAGTTAAAGTATACAGTATATGTGTTTTTACTGTTTC-TTTTTATTCAGAGGAACTCTGTGA
TGAAAAGAAAGCAGCAAGAGCTACTTGGGAATGGCGATGAATTTTATTTCCAAGGTAATTTGCTATAAATTACAGTTTTT
TTTAAAACGCACATTTGGAATTCCATGGAACAAATTGAGCATTAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCCCT
GAATGAAAGGTTCAGAAAATTAGTCACCAGTTAAAATGCAGTTGATACGAACACCCTGCAAGAGTTCTGTTTCTTACAAA
TGGCTTTCAAATTTTATCAGAAGATAGCCCACTGCCTAAAGAGCATGCAGAAGATATCCCCGGCATCCCAAGCAAAGATG
ACCAATTGACGCTTCAGAAGAGCATGTCGTTGGATGATCTGAAAAATAGGGTCTTCTTCTCCGAAACAAGTGTAGATTCT
GACATGGTGGCTTCTAAGGACATACCACTGCAAATTGGTGGCAATACTTCGATGCTCGAAGGTCCCATCGACATCGATTC
CGAGAAAGGACAGGGTAAACCAAAGAGTAGATCAAGCAGCGCGGTGAAGAAGATGATAAGTGCCTTCGAAAGCAGCTCCC
CACAGGTTCAGAATCCATCCCTATACAGAGAAACGATCGCCTTGTTGCTTAAATTCTGTTGTCACACACTGAAGAAAGTG
CAGATAATATTACACCGACTTCTCAAGTTTGCCTGGCCTGCAGGGTCTGCCTTTGGTGCCAAGGATCAGATCAGAGAGCT
CGTTGGAAGAGATGCCGTCGGTTTCTTCTTCAGAGACTTCCACCAACCCTTCACGCAAGCCTCCTACTCCCGGTGCATCA
GTGGACGCTCCAGGCCACACCCAGACAGGGCCCGGGCCAGGGAAGCAAGCCATGATCATCGGCAACAAGAAACCGAGCAC
ATCTTTTGGAAAGACCGGCCCGTTAAACACACAAGAAAGCCGAAGACGGAGCTCCAGGCAGAGCGCAGGAGTGAGCGACA
TGATTCGCTCGGAGAAGCGGTCAGCGGAAAAGCGCCGGCGTCGCTCCATCTGCACCTACTCATCGGAGCAGCAGGTGAAC
CCTTGTGGTGCGACGTCTGTTGTCGCGTGGATCAACCATCCGCACGTCTGCATCACCACTGCGAGCAGGCAGCTGAAAGA
CATTGTTGACGTCGAGCACCTGAATTCGATGGAGAACTTAGGACAGACTGCAAGGGGAGAGATCGGGCAGGTATGAACTA
AACCGTTGTGATACT-AGCTACATGC---ATGTTGGTGCTTTACTGCTTGTAGCTTCTCCTTGCTGCTTGATTCGTCCTG
ATATGCACCGTCATGAACTTGTGGAGCAGCGCGCAGGTGACGGCGCGGCGCGGTGGCCTGATGGTTTCCCGGTGCTGAAT
GGGTGGTTGATTAACCAGGTAAGTATGTATATACTTACTGCATTGATCTCTCCTCTCGCCG------AGGCTCGTTTATT
GAGAGTTTACCAGTGATGTAACCT-GGTAATGAAATGGCAATGCAGGGTGTGCGTGGTGTGATAGTGATCATAGCCTGCG
GGGCTGTGTTTTTCAACAACAGGTGAATAAGAACGCTCTTATATTTCTTTACGGAGGGAGTAACTAA----TATCAGAAG
CTGCGACCGATGAGGCATTGAGATGCAGTGCAATTTGTTTGTGTTGAGGACTTGCTGTTGCTTCATACTCCACCATGATG
ACTCGCAGTTCATGTCAGAAGTTGCGATGGGATGAGTGTGGAGTAA---ATATGTAAATCATACTGGGATGAAGATGAAC
TGTCAGGTTCTAGCGCGGCCTTCTGCCACCGCGTCCCTTTGGCTGTACGCCATGCTTTGGGATGTCTGCCCGGTGTTTGG
ACTTTGTGGTCAGGCCGGATGGTCCCGAGTCGCCTCGGTTGGTGCAAAAGACGG------------GGAGCTCTGAAATG
AGGGAGGCTCACC---ACCAGACTG---GACTGCTGTAGAATAATGAAGTTGTCACTGCCTGATTGTTGGTTTGGTTCCT
CTCTGCTAAGAGAATGGCTTGATTGGACTCTTTCGTTAGTT-GATTGTGTCGTACGTGTGCTACTGTTATTATGCTCTTA
TAAGTTAGTGCGATGCCGAGAGGCCCATCTCGAGCTGTTTTATTTATGTGGATTTCTTGCTTGTGTTGCTCTATGCTTCT
TCAACAGAAGGATTTGGTTTGTCTCAAA-CAAGATAGTCAACTGATTCATTGATTCATTCATTCATGTGTTACAAGTCTT
TTGTTGTTGTCTCTGGATGCAAACTACTAAGTACTCCCTCCGTCCCATAATATAAGAGCGTTTTTGACACTAGTAGTTCT
CTGAAGCTTGAGTTGTTTCCTGTGGGGTTCATATGATTCAGCATCACACATTTTTTTCCTT------TAGTTTTCTCTGT
TCAGTGTTCTTACAGTGATGTGCCAGCCCAGCCTATCTATTCCCATGTCACCAAAATTTTAAGTCCAATGCAGCATTGCT
GAAACTTTCAGTACACAAAAGAGAGACAGAGAGAGTTACTGAAATATTTTCATTCATTCAGTTAAAACCCTGCAGTCCGG
TCCGGTGTAAGTGTCATTGTGAGGGTGAATGCAGGCCTGTGATGGCAACAGCAGGAGCCAAAATTGAGCTCCTTGCTAGT
GGCCACACATCCAAGCTGCTTGAATAACACCCACTAGCTTAGCTGCTGTTCCTTCTCCATGCTCTAAGATCAGAACTGGA
GGGCTTCAGTGCACCGCCGAGCAGGCACTCAATGGATGCCAGGCAGCATCCGAGTCGCAGGCGAGTCATCCCTCTCTCAT
GATTGATTTATACTACTTTCTTGCATAAATTTATAACAAGATATCAGTTCTACTTGAAGCAACAACTGATGGTGTTCGCC
TTTTGCTTTTGCTACGCAGACATTCAACCACCGGTAACCACTCCACAACTCTTGCAAGGTTGGCATTCTCTGATTTTACC
GCATTTTGCTTTTTCTTCCTGCACTTTTTCATTTTCTAATATTATTGTGTGTACACAAAGCATTCCATCCTTCAAGCTAT
GCATGTTTTTTATGTTCAGGTTCACGACTGTTGCTTGCTGTTTGGTATTGCACAAGCTTTCTTTTACAAAAAGATTGTAA
ACAAAGGTGGCCCCACCGAAGTTTCCGTTTATGAGCTTTGCGTGTTCTCTACCAATTGGTTGCTCCAGTTTTTTGTGTTA
CTTCTTTGTTATGTCAAGGTTATGTTTATTGCTACTTTTTGAGTTAGTAGTTGCCTGCTTTAGGAAATATTACCTTGGTT
AAAAAGTAAATGGAAGTTCCTTTTATGAAAAATCTGCTCATATATCATTTTCGTGCACCTTTTTGAAACAGCTGTCTGTC
TTAGTGGCATAAGTTTTTTTTGGACTGCACGACTGTCGACTGCCAAACAGGGTCTAGTTAGTAGTCATGCAACTTTGACA
TTACATGGTTAATAAAGTGACTCTGTTGTCCAATCTTCACTAAAGCTTAAACTATTAAACTTGACAGTTGTGGAAAATTA
ACTTAATTTCGTCAGCCTCAATCTGGATTAATGTGATGCGCAGAGTGCTGATGGGATACTTGCTTTCTTTTAGCCTGGTC
AGTAGCAAATGTTGAAGCCGGAGCACGACCTGCAGGTTTCACAGGGCAACAGTCAAGCTGCCCATTTCAGCAGTATGGAT
CCATCATTCTCCAAGGCTGCAGCTTCTTCACCTCTTGAGCAAACCCGAAGGAACCAGCTACCCAAGCACACAGCAGCAGC
CATATGGTATGCCTATGCACCTGGCTAAGGACAGACAATTTCAACACTGTTTGGTGTCTCAAGATCACAACAATCTTCTT
GTAGCAGGTGTGATACCCGGTGTGCAGAACGGACCGCAGATTCAGCAGCAGAACCATGCATCTCCGGTCGCTTGAACCCC
TTCTTCGCGACCACTGCATCAGAAGCAGCAGTCTGCGCAAAGTCCACCAGATAGCTGTGCACTTGCCAATCAATCTGCCA
ATGCTACTGAACCAAAGCAGAAGAAACACCAGGGTCAACAGCAGCCTAGACAAAACCAACAACAGAGGAATCAAGCTAGT
CAGCAGAGCTAGGCTTATGAAGAGTTAATTTAGGACCTGGAAACATGGTGACACCTCAGGCTCCTGCAACCGGCGCCTTT
CCAACCAGTGCTGTTCGTAGGGCTTCTAAGAAACAAGTTCCTGACAAAAATTTGACGCAACATGGCCATGGTAATAAAGC
GTCGATTTCAGCAACACCTCAGCCTGGGAATCAACATAAGCTATATACCTCGGTGCCTTGTCAGGTTGAGGTTTATGTGA
AGGATCGAACAACTAACTCTGAATTCAGAGACGAAAAGTAGCGCTCAAAGAGGGCAAATTGCTGGGGTTTGAGCGACTTG
CAGATGCCCATATAGAGGCCAGCCGGAGCACGGTGGCTAGGATTTCGACCCAGTACAGGAATGGATGCCTCTCAAGGCCC
GGGCTCTTGGCTCTTATAGTCACTAAATCAGTAAAGCATAAAGAAGGGTACAAGCTGTAAAGGGAATTTAAACAGCGACA
AGCGGACTAGTCTTGGCCGTCCGATCGCAGATCAATGTCAACAGCATCGTCTTCTTGGTGTGAAATGGTAATTGTTGATG
GCGACCGTTGGATTGCGGATGGATGGCTGAGGAACGCTGCTGCTGCTGGTGGTGGTGTTATGTGGAAGAAGAATGGATGC
TGCTGCTGTTATTCAGATGGTAGCTGATTCGCTGCCAGCTCAACAATCGAGCCAGTCAGTGTGTTCCTGTTAGTGGATTC
ATTCTTGTTGGAGTTGCAATCTCACTCCCCCAAACCTACAATGTGTCGCACCTCCGCAATGAGTTTTATGTTTAGGTTTG
TGAGTTTTGCTTTCTCTTCGTTATTCCACAAGCTTTCTTTTACAAAACTTGGGTAAACAAAGGGCCGCCCTACCATATTT
ACGTGAGGAACGAAGTAGCTTGTCGTGGTAACCAAGATAATCATGTGATAAGTCTCTGCATGTCTGAAAACAATGCCACA
GAGGACTTGTTTATGAGGTTTTGTATGTAACATAGTTCTCTGTTATGTCAAGGTTATGTTTATTGCTTCCATCCATAAAC
CAGCAGAAGCATGAGGCATCATAAGTGCATGTGTGAGGCCCCATTCCTGATAACTCTGAAGAGTAGTAGTTGGACAATTG
GCTGAGTTTAACTCAAGAAACAGGACCCAAATCCAGGGCCAGGTGATGGGTTCTCGATGTTGGCTCATCGTTTTCATGGA
CAAGAGCATTTATGAACCCCAGCTTTGTTGCAGTGCAGCAAACGGAAGCTGTGATTCTTGCGCACCAGGTGGACTGCTGG
AGCTGGACTGCACGGAGGCAGTGAGAAAGTTACAAAGCGAAGCTTTAGATCGCTCTATCTACGACGCTACATTGGTGAAG
GAGATTAAATGTCAGTTATTTGAATCTGCCGACTATCGATCGATGGTGTAGTGTGGTGCCGTAGATTGGCAAAGGCTGGA
TGTAATGAACCAAGTAGTATGATGCTTCAGTTTCGTCAGAATCTTCACTAGTTTCAGTTTCGTCAGTTAAGTCTATTGGT
TAAGGAGCCTGAATGCGCCGCACATTTGCTTGCTACCTGCTCTTTTGCCAAGGAGATTTGGCAGTGTCTGTATGAGGAGT
GTGAGCGTACATTTTTGTGATAGCAACCGCTAGCAACAGCAGGGGACAAAATTTAGCTCTTCCAGTGGTCCCTCCCAGGA
GGCCTTGCTAGTGGTGGCTGTTACAGACAGCCACACATCCAGGCTGCCTTCAACAACATCCACTAGCTTAGCTGCTGCTC
CTCCTCCTCCTTCCCCAGTCTCCAAGATCAGAATTGGAGGGCTTGTACGCACCACCGAACCATGCCGGGCAGCATCCGAG
TTTCAGGCAAGTTTATTATCCCTCTCTTATCATCTGCAAATATTTATTTATTCTTCTTCCTGTAAAAAGATACGAACAAA
ACATAATTAATGCTCTCCCCTTAATGAATGAAAAGCAGCGTCGCTGCTGCGTCTCGTCAAAAAGAAAAAGAGATCACACT
GTTGTATCTTTTGCTGTGCAGACATTCAGCCACCCGTCGCCGCTCCACTCTTCTTGCAAGGTTGGCTGCTGCCTTCTGAT
TCCAGTGTACTTTTCCTGTTTCCTCCTTTTATGTTTGCTAATGTTATCGTTCGTATGTAAACATCGTTTTTTTTATGCAG
TTAACCTGGGGAAAAAAGAGTACAGCGGATATATTGGACAAGATGGCTTCTCTTTGTAAGCCCATTTCCGTACCGCCTTC
ACTGATCTTTATTCTCTGTTCACTTCTCCATTTCCACAAAATGTGCATCGAGGCTCCCCCCAAGGAAAACTTTGAGGCTG
TCTCACGCCAAAAATTTACATATGTGCAGTCCAGTTACATCACTTCGAGATAGCATGGTGTTGTCGCTGTACGATGCAGA
TAAGGAATTGGTATCCAAAACAGGTTTCTTCTGTTAGTTTGTTATAATAAGCCTATCTTATATTTATCATCAGCACACGT
ACCAGCTGATGATGTGCATCATGGTTTCATGTAAATCACAACAGAAGTGAAGACACGGTCGATTGTCGAGCTGGGGAGTA
CGGATGTTGTGTTTACTCTTGATAGTGGAGGGGAAATTATCCTCCAGTTGCAGTTCTTGCTTAGTGATGAAGATCGCAAG
CGTATCCAAGAAATGGTAACATGCCAATTTGATGGTTCATGCTGTTTCCATGAAAACTCAGAAAACATCTTGCTTGAAAG
GTTCATCTTAAGTTACGGCATACTACTCATGTTTATACTATTTCCTTTTATTCAGAGGAACTCTGCGATGAAAAGGAAGC
AGCAAGAGCTGTTTGGGAATGGCGATGAACTTTATTTCCAAGGTAATAATATTCAGTTTGTGTTCACTGCAAGCACACAT
TTGGAGTTCCATGGAACAAACTGTAAGCATTAGGGTGTGTGTCTGTGTCAGTTTGCCCCCTAAACAAAAGGTTCAGAA
>chr1B_1
TGCTCGTCAGGACCTACTACAAGGACTCCCCGGCCAAGACCGCCGACTCTGCTTCCGCCACTGCAACGGCGTCCACATCG
TCTGCCGCCGCCGCCGCCGAGTCCACTGACCCGCCGGTGGCAACGCCCGCCAAGGTGCTC------CCGCCGATCCCCGA
GGACGAGCAGCGCCGGGTCTACAAGTGGATGCTGGAGGAGAAGCGCAAGGTGAGGCCGCGCGACGCCGCCGAGAAGAAGA
GGCTCGACGACGACAAGGCCCTGCTCAAGCAGATCATCCGCGCCGACACCCTCCCGGTGCTCTGAGACCGGATGCGTGGA
TGGGTGGATGAAGCTCACCGCCAGATTGATCGATGTTGCTGCTTGCGTCTGTCATTGCTTTGCCTCATGTCTCTCTTCTC
TGCTAAAGAGAATGGTTTGCTTGGACTCTTTAGTTAGTTGATTGTGTCGTGTGGCACTGTTATTATCATCATCTTATATA
AGT----TAGTACGACGCCGAGAGGCCCATCTCGAGCTGTTTTATTTTAGTTGTGTGGATGCAGACAGGCTGGTCTTGTT
GCTTGTGTTGCCCTGTGCTTCTTCAATATAAGGATTTGATTCGTCTCAAACGAGATATTCAACTGA--------------
--------TTGTTTTCTGTGGATGTGGATGCAAACTGATTCTTTGCAG--------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CTGGCCCGGGGCACAATTTCGTTCATT
CAGTTAAATAACTGCGGCCCGGTGCAAGTGTGGTCAGTGTCTGTATGAGTGTGAATGTTGGTCTGTGACTGTGATAGCAA
CATCAGGAGCCAAAATTGAGCTCCTCCGGTGGCCCCAGGAGGCCTGGCTGGTGGCTACAGATAGCCACACATCCAAAGCT
GCCTCAAATAACATCCACTAGCTCAGCTGCTGCTCCTCCTCCCCCATACTCCAAGATCAGAATTGGAGGGCTTCTGCTGC
AGCATCAGGCAGGCGTTCAACAAGGATGCCGGGCAGCATCCGAATCTCAGGCGAGTCATCCCCCCTCTCTCTCTTCTGAT
TTGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATACTTTTATCCAAAACTTGAATATGAATCAAATAACATAC
TGTTGTGCTGGAGGCGAGAAATTGACGGTGTTCGTCTTTTGCTTTTGCTGTGCAGACATTCAGCCGCCGGTCACCGCCCC
ACTCTTCTTGCAAGGTTGGTTGCTATCCTCTGATTTCACTCTACTTTTCCCGTTACTTCCATCGCACTTCCTGTTCGCTA
ATGTCGTCGTATCGTTTTGGATGCAGTTAATGTAGGGAAGAAAGAGTACAGCGGAGACATAGGGCAACACGGATTCTCCC
TGTAATCCCATTCCCATATCGCCTTTCGCTAGTTTTTACTTGCGTTTTACCTTTCTAATTC-------TGCGCATCGAGA
ATGTATCTCACACCAAGATGATAATATGTGCAGTCCTGTTACATCGATTCGCGATAGCATGGTGATGACGCTGTACAATG
CAGACAAGGAATTGGTATCCAAAACAGGTTTGTTTGTTGTTGGTTCATTAAGCCCTTCTTCTGTTTATCATCTGCACGCC
TGTCAATTAACGCGCGTCGCAATTTTTCTGCAAATCATCACAGAGGTGAAGACAAAGTTGATTGTTGAGTTGGGAACCAT
GGATGCTGTTTTTACTCTTGATAGTGGAGGGACAATTATTCTCCAGTTGCAGTTTTTTCTCAGCGATGAAGACCGCAAGC
GCATCCAAGAGATGGTGAGATGCTTCTTTTATGGT---TTATGCTATTTCCATGAAAGCTTAAAAACTATTTTTTTTCTT
GAATGAAAGGTTCAGTTTAAGTTAAAATATATATTATATGTGTTTTTACTGTTTCTTTTTTATTCAGAGGAACTCTGTGA
TGAAAAGAAAGCAGCAAGAGCTGCTTGGGAATGCCGATGAACTTTATTTCCAAGGTAATTTGCTATAAATTATATTTTTT
T---AAACGCACATTTGGAATTCCATGGAACAAATTGAGCATTAG------------GTGTGTCTCTGTGTGTGCTCCCT
GAATGAAAGGTTCAGAAAATTAGTCACCAGTTAAAATGCAGTTGATATGAGCACCATGCAGGAGCTCTGTTTCTTACAAA
TGGCTTTCAAATTTTATCAGAAGACAGCCCACTGCCTAAAGAGCATGCAGAAGATATCCCCGGCATCCCAAGCAAAGATG
ACCAACTGACGCTTCGGAAGAGCATGTCGTTGGATGATCTGAAAAAGAGGGTCGTCTTCTCCGAAACAAGTGTAGATTCT
GGCATGGTGGCTTCTAAGGACCTACCGTTGCAAATTGGTGGTAATACTTCGATGCTCGAGGGTCCCATCGACATCAACTC
CAAGAAAGGACAGGGTAAACCAAAGAGTAGATCAAGCAGCGCGGTGAAGAAGATGATAAGTGCCTTCGAAAGCAGCTCCC
CACAGGTTCAGAACCCGTTCCTATACAGAGAAACGATCGTCTTGTTGCCTAAATTCTGTCGTCACACACTGAAGAAAGTG
CAGATAATATTACACCGACTTCTCAAGTTTGCATGGCCTGCAGGGTCTGCCTTCGGTGCCAAGGATCAGATCAGAGAGCT
CGTTGGAAGAGATGCCATCGGTTTCTTCTTCAGAGACTTCCACCAACCCTTCACGCAAGCCTCCTACTCCCGGTGCATCA
GTGGACGCTCCAGGCCGCACCCAGACAGGTCCCAGGCCAGGGAAGCAAGCCATGATCATTGGCAACAAGAAACCAAGCAC
ATCTTCTGGAAAGACCGGCCCGTTAAACACACAAGAAAGCCGAAGACGGAGCTCCAGGCAGAGCGCAGGAGCGAGCGACA
TGATTCGCTCGGAGAAGCGGTCAGCGGAAAAGCGCCGGCGTCGCTCCATTGGCACCTACTCATCGGAGCAGCAGGTCAAC
CCTTGTGGTGCGACGTCTAGCGTCGCGTGGATCAGCCATCCGCACGTCTGCATCACCACTGCGAGCAGGCAGCTGAAAGA
CATTGTTGACGTCGAGCACCTGAATTCGATGGAGAACTTGGGGAAGGTATGATGAA-------------------AACTA
AACTGGTGTGATGCT-AGCTGTATGCATGATGTTGGTGCTTTACTGCTTGTAGCTTCTCCTTGCTACTTGATCCGTCCTG
ATATGCACCGTCATGAACTTGTGGAGCAGGGCGCAGGTGACGGCGCGGCGCGGTGGCCTGATGGTTTCCCGGTGCTGAAT
GGATGGTTGATTAACCAGGTAAGTAT----ATACTCACTGCATTGATCTCTCCTCTT------GCCGATGCTCGTTTATT
GAGAGTTTACCAATGATATAACCTTGGTAATGAAATGGCAATGCAGGGTGTGCGTGGTGTGATAGTGATCATAGCTTGCG
GAGCTGTGTTTTTCAACAACAGGTGAAGAAGAGGACGAGTGCAGTTGATAACTTA-----TAACTAA----TATCAGAAG
CTGCGACCGATGAGGCAATTTATTTGTG----------------------------------------------ATGATA
ACTCGCAGTTCAGTTATACAGTAGAAGGGTAGAGGTGGCGTGGTTAGAGAGCACGTTGAGGGCACATGAAAGCCAACATG
AAACAACATGAGGAAGAGCAGCGCCGGGTCTACAAGTGGATGCTGGAGGAGAAGCGCAAGGTGAAGCCGCGCGACGCGGC
CGAGAAGAAGAGGCTCGACGACGACAAGGCCCTGCTCAAGCACATCATCCGTGCCGACACCCTCCCGGTGCTCTGAAACG
AGGGAGGCTCACC---ACCACCAGACTTGACTGCTGTAGAATAATAAAGTTGTCACTGCCTGATTGATGGTTTGGTTCCT
CTCTGCTAAGAGAATGGCTTGATTGGACTCTTTTGTTAGTGCGATTGTGTCGTACGTGTGCTACTGTTATTATGCTCTTA
T------------------------------------------TTATGTGGATTTCT----------------TGCTTCT
TCAAGATAAGGATTTGGTTTGTCTCAAAACAAGATGGTCAAACTGAT-----------TCATTCATGTGTCACAAGTTTT
TTGTTGTTGTCTCTGGATGCAAACTAGTACTAAA---------------------------------------TAGTTCT
CTCAAGCTTGAGTTGTTCCCTGTGGG------------------------------------------------------
----TGTTCTTACAGTGATGTGCCAGCCCAGCCTATCTATTCCCATGTCACTGAAATTTTAAGTCCAATGCAGCATTGCT
GAAACTTTCAGTACAAAAAAGCGAGAGATAGAGAGAG-------------------------------------------
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>SNPs
-----------------------------------------------S----------S-----S---------------
----------------S--------SS-----SSSS-SS--SSSSS-SS--SSSSS--S-SSSSSS--------------
---------------------------------------------------------------------S----------
----S--------S---------------------------------------------------S--SS--SSSSSSS-
SSSSSS-------------------S--SS-SSSSS-------S-SS-SSS-S-SSSSSSSSSSS-SSS-SS--------
-------------------S--------------------------------------S-----S-----S-------SS
SSSSSSS-----S--S---S--------------------------------------------S---S-----------
-------------------------------------SSS------------------------S---------------
---------------------------------------S----------------------------------------
------------------------------SSS--S-----SS------S---------------SS-------------
---------------S---------------S--------------------------------S---------------
------------------------------------------------------S-------------------------
---------------------------------------------S----------------------------------
----------S------------------------SS-S-SSSS-S----------------------------------
------------S--S---S--------------------------------S----------------------SS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SS--S-------S---------------------S
-S-----------------------------------S---------------------------------------S--
------------------------------------------------S--S--S----S--------------------
----------S---------------------S---------------------------------S-------------
-----S------------------------S----------------S-----------------------S--------
---------------------------S----------------------------------------S-----------
----------------------S------------S--------------------------------------------
--------------------S-----SSSSS--SSSS-------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SSS-------S--------------------SS------------
-------------------------------S-------------S----------------------------------
-------------------------------------------------------------------------SS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------S----------------------------SS------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------S------------------------------------------S---------
--------------------------------------------------------------------------------
------------------------------------------S---------------------------------S---
--------S-------------------------S---------------------------------------------
------------------------S------------------------------------------------------S
--------------------------SSS-----------------------------------------------S---
---------------S---------------------------S------------------------------------
--------S----------------------------------------------S-----S----S-------------
-------------------------------S---------------------------S-SS---S-------------
--------------------------------------------------------------------------------
--------------------------------------------S---------S------------SSSS---------
--------------------------------------------SS-S-S------------------------------
---------------------S-------S--S------S-----SS-S--S----------S---------S-------
----S--------------------------------------S---S---S----------------S--S--S-----
--------------------------------------------------------------------------------
-------------SSS--------------------S----------------------S--------------------
---------------------------------S--------------------------------------SSS-----
------------------------------------------------------S-------S-----------------
--S------------------------S-------------------S-------S-S----------------------
-------------S------------------------------------------------------------------
--------------------------------------------SSSSSSS---S--SSSSSSSSSS------------S
--S------------------------------------------------------S----------------------
--------S-----------------S--------S-----S--S-S---------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----------------S---------------S----------------------S--------------------S--
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>forward_314
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------------------------------------------------------CGGTGCTCTGAAACGAGAGA------
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>reverse_2743
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----------------------CACCGTTGCAAATTGGTGGT--------------------------------------
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>forward_2027
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-------TAACGTGCGTCGCGATTTTC-----------------------------------------------------
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>reverse_3740
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-----------------------------------------------------------TGTCGCCAAGGCTCGTTTAT-
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>forward_3469
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---------CGTCGAGCACCTGAATTTCG---------------------------------------------------
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>reverse_5097
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--------------------------------------------------------TCAGGCGAGTCATCCCTCTC----
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------------------------------------------------------------------------------
