>input_sequence_34438
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------------------ATGGACGACTCGCCGCTAAGCCGCGGACCCCTGGGCCCCCTGCTAGGTAGCGGTCCACTGGA
CCCGTCGTCGTCG---GCGGCAGATTCGGATGGCTCGGGTGGATCGTCGTCCGCAGATTCGGATAGCTCCGGTGGATCGT
CGTCATCGGGATCCCCGCCGTCTCCCTCCAGCCCACAATCGTCCACGCAGTCGACCCCACCGCCAGGGTCCTCGGACTCG
GCGCCGTCGCCGCCCTCGCCGTCTCAGTCACCGCCGCCGGCTACGCCAGCAGGCACCAGCGGGCCGCCCCCGG-------
--------------------------CTCAAGTCTCGCCGCCGGGGTCAAATGCCATCCCGTCTCCGCAGGCTCCGAAGA
GCAACGGGGGTGGCGGCGGCGGCGGCGGCTCCTCGGAGAGCGGGGGCGGCTCCAAGGGCGGGGGCGGGTCGAGCGGCCGC
GGCAAGGGCGGGAGCAAGCAAGACGATTCTCCGCCCGTGGAGGCCGTGGTCGTCGGCGTGGTGATCGGGGTCCTGGTCTT
CGCCCTGCTGCTGTGCATCGCCGCGTGCGTGTGCTGCGCC---AGGAGGAAGAAGAAGAAGCCGCCCATGGCCATGCCCT
TCTACACCGACCAGCATGGTACGGCCGGCGCGCGCGCGCATCGCATGCATCGTGCCCATTCCATTCACCATGGAGATTCT
TGGCAGAGATCTAACCGTGACCATGGGGGCGCGCGGGCGCGTGCAGGGAACGTGTACTACGCGAACAACATGCCGAGCCC
GTGGCAGCAGAGCGGCGGCCCGGTGGACGGGCACGGCGGCGTGGGGTGGCACCCGCAGTACCCGCTGGGCCAGGGGCCGC
TGAGCGAGGAGATGATCATGAGCGGGTCGCAGGGGACGGGGTCGTCGATGCCCCCGCCGTCGCCGGCCATCTTCGGGTCG
CAGAGCTCGTTCACGTACGAGGAGCTGGCGTCGGCGACGGGCGGCTTCTCCAAGGCGAACCTGCTGGGGCAGGGCGGGTT
CGGGTACGTGTACAAGGGCCTGCTGCCGGGCAGCGGCAAGGAGGTGGCGGTGAAGCAGCTCAAGGCCGGCAGCGGGCAGG
GCGAGCGCGAGTTCCAGGCGGAGGTGGAGATCATCAGCCGCGTCCACCACCGCCACCTCGTCTCCCTCGTCGGCTACTGC
ATCGCCGGCGCCTCCCAGCGCCTGCTCGTCTACGAGTTCGTCGCCAACGATACCCTCGAGCGCCACCTCCACGGCAAGGG
CCTGCCGGTCATGGACTGGCCCAAGAGGCTCGCCATCGCGCTCGGCTCCGCCAAGGGCCTCGCGTACCTGCACGAGGACT
GTAAGTCTCTTCTCCTCTTCTT-TGGCCACATCGATCCATGGCGTTC---GTGCTTCTGATGTCGTGCATTATAAAGGCA
ATCCGAGGATCATCCACCGTGACATCAAGGCGGCCAACATTCTCTTGGATGAAAATTTCGAGGCTAAGGTGATTAGGCTG
TGAGATTTGTGAATCACAGTGCA-CGAAATTCGTGAGATT-GGAGTGAAAACTCGCCTGAATGTTGGCAGGTCGCGGATT
TCGGGCTCGCCAAGTTGACGACGGACAACAACACCCACGTCTCCACGCGCGTCATGGGGACGTTCGGGTGAGCAGAGCAC
GCACGCACGCACGCTGAA-CAGAGCAGCAAGTGTCGCCATTGCGGCACCATGGGAGCAGAGCTCGAGCGTTGATGTCTTC
TCCGCTGTTGGGTCGTGCATGCAGGTATCTGGCGCCGGAGTACGCGTCCAGCGGCAAGCTGACGGACAAGTCGGACGTCT
TCTCCTTCGGCGTGATGATGCTGGAGCTCATCACCGGCCGGCGGCCCGTGGACCCCAGTAACTACATGGAGGACAGCCTG
GTCGACTGGGCGAGGCCGCTCCTGGCGCGCGCGCTGTCGGAGGGCGGCAGCTTCGACGAGGTGGTGGACCAGCGCCTGGA
GAACAAGTACGACCGGCAGGAGATGGAGCGCATGGCCGCCAGCGCCGCCGCCGCCGTCCGGCACTCCGCCAAGCGCCGCC
CCAAGATGAAACAGGTCAAGATCGAT----CGATCGGCAACTCTCAATCGATGATGAGCAACTCGCCGTGAATTGACAGT
GATTCTTGCACCGTTTCTACAGATCGTTCGCGCGCTGGAGGGCGACGCGTCGCTGGACGACCTGAACGAAGGGATGAAGC
CAGGGCAGAGCATGATATACAGCTCCGACGAGTCCGGCAGCTACGCGGCCAACATCAACAGGCTGAGGCAGGTCGCGTTC
GAGAGTAGCGGGGAGTACACCAACGAGTACAGCGGGACGGGGGAGTCGGGGGAGACGACACAACGGCATCACTAA-----
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-------------------------------------------------------
>chr4A_1_TraesCS4A01G077500
CATAAAATGGCAACAGCCAATGTGCCATGGTCACCATGGTTGAGTGGCACTACACTGAAATTGATCCGCGCATCCATGGA
CGAGAATGTGGTTGTCAGGCCTAGACCTGACGATCTGAATCTCCCAACTTCTCTCAAGAAACCTGGTGTAACCGAAGCTG
CCGCCGAGCGTGACATTACGGCTTGGCGCCGAGCCAGTCAATCCCTCCCGTCCGTGACGCATCCAATGGCCAAGAACGAA
CTTGCTATGTCGGCACTGTTCACCATCCGGCAAATCACCTTCCTTATGCCGCTTCTCCCATTTGAATTTGATGTTACTTT
TACCGTGGACTGCAAGAGAAGGACTTG--------GACTCATCAACTGCTTCAGCTACGGCCTGCAA-TGGCATGGTAAA
CACGAGCATTAATGCGGTTT-GACAGCTCCGCTCAAGCGGCTTTCAACCCTCCGTTCTGCCTTCAGGCTAAAAATGGAGA
AAACATAAAGGACAGCAATGGCGAGTGTCCAAGAAATGTGACGAAACCTACGCCGCCCAAAGCCTACTTCCCTCCCCCCG
TCTCTCCGGCTCCGTTTCAACCCCTTCTTTCTCTTCTTCTTTTGCGGAAGAACAGGGGAAAAAAAGGAAGGTACATCACC
ATGGATGCTTCGACTCCCTCGCGTTTTCACGTCTTCGGTTCGAATTTCAGTGTCGCAGAGCCGAAGAATTTAATTTGTCT
ACCGTGAAATCTGGTTTTGCATTT---------------------------------------------GCGTGGTTACC
ATTGATCCTTTTTTGCGGGAATTTGCGGTTGATTGGTGGTTCTCAAATGTGAGCTAAATTGGTGATCAACTTAGGTCTGA
AATGTCTAGCTCGCCATGGCTGCAGGGGTTCATTATGGGGAGGGCGACGGCGGCGAGGAGCTAGCGGCGTTCCGACCCAG
AGCATCTTCTAGGTGGT---GGTGGAGTCATCTTCACCGGGAAGAGCTCCATCGTGGCGAGCTGCGCGGGACGCTAACGA
GGGATCCTCCTATCAGCAATGGACGACTCGCCGCTAAGCCGCGGACCCCTGGGCCCCCTGCTAGGTAGCGGTCCACTGGA
CCCGTCGTCGTCG---GCGGCAGATTCGGATGGCTCGGGTGGATCGTCGTCCGCAGATTCGGATAGCTCCGGTGGATCGT
CGTCATCGGGATCCCCGCCGTCTCCCTCCAGCCCACAATCGTCCACGCAGTCGACCCCACCGCCAGGGTCCTCGGACTCG
GCGCCGTCGCCGCCCTCGCCGTCTCAGTCACCGCCGCCGGCTACGCCAGCAGGCACCAGCGGGCCGCCCCCGG-------
--------------------------CTCAAGTCTCGCCGCCGGGGTCAAATGCCATCCCGTCTCCGCAGGCTCCGAAGA
GCAACGGGGGTGGCGGCGGCGGCGGCGGCTCCTCGGAGAGCGGGGGCGGCTCCAAGGGCGGGGGCGGGTCGAGCGGCCGC
GGCAAGGGCGGGAGCAAGCAAGACGATTCTCCGCCCGTGGAGGCCGTGGTCGTCGGCGTGGTGATCGGGGTCCTGGTCTT
CGCCCTGCTGCTGTGCATCGCCGCGTGCGTGTGCTGCGCC---AGGAGGAAGAAGAAGAAGCCGCCCATGGCCATGCCCT
TCTACACCGACCAGCATGGTACGGCCGGCGCGCGCGCGCATCGCATGCATCGTGCCCATTCCATTCACCATGGAGATTCT
TGGCAGAGATCTAACCGTGACCATGGGGGCGCGCGGGCGCGTGCAGGGAACGTGTACTACGCGAACAACATGCCGAGCCC
GTGGCAGCAGAGCGGCGGCCCGGTGGACGGGCACGGCGGCGTGGGGTGGCACCCGCAGTACCCGCTGGGCCAGGGGCCGC
TGAGCGAGGAGATGATCATGAGCGGGTCGCAGGGGACGGGGTCGTCGATGCCCCCGCCGTCGCCGGCCATCTTCGGGTCG
CAGAGCTCGTTCACGTACGAGGAGCTGGCGTCGGCGACGGGCGGCTTCTCCAAGGCGAACCTGCTGGGGCAGGGCGGGTT
CGGGTACGTGTACAAGGGCCTGCTGCCGGGCAGCGGCAAGGAGGTGGCGGTGAAGCAGCTCAAGGCCGGCAGCGGGCAGG
GCGAGCGCGAGTTCCAGGCGGAGGTGGAGATCATCAGCCGCGTCCACCACCGCCACCTCGTCTCCCTCGTCGGCTACTGC
ATCGCCGGCGCCTCCCAGCGCCTGCTCGTCTACGAGTTCGTCGCCAACGATACCCTCGAGCGCCACCTCCACGGCAAGGG
CCTGCCGGTCATGGACTGGCCCAAGAGGCTCGCCATCGCGCTCGGCTCCGCCAAGGGCCTCGCGTACCTGCACGAGGACT
GTAAGTCTCTTCTCCTCTTCTT-TGGCCACATCGATCCATGGCGTTC---GTGCTTCTGATGTCGTGCATTATAAAGGCA
ATCCGAGGATCATCCACCGTGACATCAAGGCGGCCAACATTCTCTTGGATGAAAATTTCGAGGCTAAGGTGATTAGGCTG
TGAGATTTGTGAATCACAGTGCA-CGAAATTCGTGAGATT-GGAGTGAAAACTCGCCTGAATGTTGGCAGGTCGCGGATT
TCGGGCTCGCCAAGTTGACGACGGACAACAACACCCACGTCTCCACGCGCGTCATGGGGACGTTCGGGTGAGCAGAGCAC
GCACGCACGCACGCTGAA-CAGAGCAGCAAGTGTCGCCATTGCGGCACCATGGGAGCAGAGCTCGAGCGTTGATGTCTTC
TCCGCTGTTGGGTCGTGCATGCAGGTATCTGGCGCCGGAGTACGCGTCCAGCGGCAAGCTGACGGACAAGTCGGACGTCT
TCTCCTTCGGCGTGATGATGCTGGAGCTCATCACCGGCCGGCGGCCCGTGGACCCCAGTAACTACATGGAGGACAGCCTG
GTCGACTGGGCGAGGCCGCTCCTGGCGCGCGCGCTGTCGGAGGGCGGCAGCTTCGACGAGGTGGTGGACCAGCGCCTGGA
GAACAAGTACGACCGGCAGGAGATGGAGCGCATGGCCGCCAGCGCCGCCGCCGCCGTCCGGCACTCCGCCAAGCGCCGCC
CCAAGATGAAACAGGTCAAGATCGAT----CGATCGGCAACTCTCAATCGATGATGAGCAACTCGCCGTGAATTGACAGT
GATTCTTGCACCGTTTCTACAGATCGTTCGCGCGCTGGAGGGCGACGCGTCGCTGGACGACCTGAACGAAGGGATGAAGC
CAGGGCAGAGCATGATATACAGCTCCGACGAGTCCGGCAGCTACGCGGCCAACATCAACAGGCTGAGGCAGGTCGCGTTC
GAGAGTAGCGGGGAGTACACCAACGAGTACAGCGGGACGGGGGAGTCGGGGGAGACGACACAACGGCATCACTAACCATT
AATCCCCTTGGAGGAGCTCTTCACCGC----ATGGACCTGTGATGTAAGTTGGCCGTGTAAAGGGAATCGATTGGTGTAT
ATACGT------ACGAGGTGTACACTATGGTTGATGATGATGTAACTGCTTCAATGCTTGTGAATCGGGGCTGTATTATC
GTGTAAAGTT-GATGTATCCGTGTACTTACATGATGTAATGCGCAGCTCTTGGGTTGTATTAGCTCAGTGGAAAGAGAAC
TTCAATGGAGAGCCTCGATATCTGGCATTGTTAG---------ACTTCTGTCCATAAAATCCTTTGACTCCTATAAAAAA
ATGTCTGATTTGAGGAGTTAGGCTAGTCATAGTGGGAGTAACTTAGATAGTAACCTAGCGCACTTTGAGAAATTTTTGCT
TATGTGGCATGTAGTTAATGAGAAGTGGTAACATAATATGTTACTGTAACATAGCGCTTTCCAAGATAAGATGAGTCTAC
AAGCCATTAAATAAAGTCACATATGACACTACTAGTATATTACTTTGCATTATAAATGTGGTAACTTAGACTAGTGTCAT
ATGCATGACACTAGTATAAGTTACTCCCCACTATGACTAGCCTTAGAGCATCTCTAGCCCTTGACGAATGACCTAGCGGC
CGATTGGACGGTGCGCTAGATGGAATTGTGCATTGTACACTTTATAGTCGGTCAACCAGACGCAATCGATCGTATTAGGG
TTAACCTTAATGCATGTGTGAAATACAAACCCTAGCTGCCGCACTCCCTCCACTCATAGCGCACCTTCGACTCTAACGCG
TGATGCTCAAATCCTTGTACATTTGGGATACCTTGGAGGTGTTGCACATGCGAATATGCGATGCTTGGATGAATCATTCA
TGGGATCCAGTAGGAGTTGTACCTGGGATCATGTGCAGAAGTGTGACTACATCAGCATTGACGCGTGACATCGACAACCT
TTCACTGCACTGCGTATCAAAAGGTAATTCATGGCTCCACTATCCATTACTTCCA
>chr4D_1
CATAACATGGCAACAGCCAATGTGCCATGATCACCATGGTTGACAGGCACTACACTGGAATCGATCCGCGCCTTCATGGA
CGAGAATGTGGCTGTCAGGCCTAGACCTGACGATCTGAATCTCTCAAATTCTCTCAAGAAACCTGATGTAACCGAAGCTG
CCGCCCAGCGTGACATTACGGCTTGGCGCCGAGCCAGTCAATCCCTCCCCTCCGTGACGCATCCAACAGCTCACAATGAA
CTTACTATTTCGGCACTGTTCACCGTCCGGCAAATCACCTTTCTTATGCCGCTTCTCCCATTTGATGTTACTTA---TTA
TACCGTGGACTACAAGAGAAGGACTTCGACAGTTCGACTCATCAACTGGCTCAGCTACGGCCTGCGA-TGGCACGGTAAA
CACGAGCATTAATGCGGTTTTGACAGCTCCGCTCCAGCGGCCTTCAACCCCCCGTTCTGCCTTCAGGCTAAAAATGGAGA
AAACATAAAGGACAGCAATGGCGAGTGTCCAAGAAATGTGAGGAAACCTACGCCACCCAA-GCCTACTTCCCTTGCCCCG
TCTCTCCAGCTCCGTTTCGACCCCTTCTTTCTCTTCTTCTTTTGCGAAAGAACAGGGGAAA-AAAGGAAGGTACATCATC
ATGGATGCTTCGACTCCCTCGCGTTTTCACGTCTTCGGTTCGAATTTCAGTGTCGCAGAGCCGAAGAATTTAATTTGTTT
ACCATGAAATCTGGTTTTGCATTTGCGTGGTTACCATTGTGTTGTTGTTTTTTTTTTTTTTGCGAATAAGCGTGGTTACC
ATTGATCCTTTTTTGCGGGAATTTACGTC-GATT------------------GCAAAATTGGTGATCATCTTAGGTCTGA
AATCTCTAGCTCGCCATGGCTGCAGGGGTTCATTATGGGGAGGGCGACGGCGGCGAGGAGCTAGCGGCGTTCCGACCCAG
AGCATCTTCTG------GGGGGTGGAGTCATCTTCACCGGGAAGAGCTCCATCGTGGCGAGCTGCGCGGGACGCTAACGA
GGAATCCTCCCATCAGCAATGGACGACTCGCCCCTAAGCCGCGGACCCCTGGGCCCCCTGCTAGGTAGTGGTCCACTGGA
CCCGTCGTCGTCG---GGAGATTCAGG---TGGCTCGGGTGGATCGCCGTCGGGAGATTCGGATAGCTCGGGTGGATCGT
CGTCGTCGGAATCCCCGCCGTCTCCCTCCAGCTCACAATCGTCCACGCAGTCGACCCCGCCGCCAGGGTCCGAGGACTCG
GCGCCGTCGCCGCCCTCGCCGTCTCTGTCACCGCCGCCGGCTACGCCAGCAGGTACCAGCGGGTCGCCCCCGGCTACGCC
AGCAGGTACCAGCGGGTCGCCCCCGGGTCAATCATCGCCGCCGGGATCAAATGCCATCCCGTCTCCGCAGGCTCCGAAGA
ACA---------GCGGGGGCGGCGACGGCTCCTCGGAGAGCGGGGGCGGTTCCAAGGGCGGGGGCGGTTCGAGCGGCCGC
GGCAAGGGCGGGAGCAAGCAAGACGGTTCTCCTCCCGTGGAGGCCGTGGTCGTCGGCGTGGTGATCGGGGTCCTGGTCTT
CGCCCTGCTGCTGTGCATCGCCGCGTGCGTGTGCTGCGCC---AGGAGGAAGAAGAAGAAGCCGCCCATGGCCATGCCCT
TCTACACCGACCAGCATGGTACGGCCGGCGCGCGCGCGCATCGCATGCATCGTGCCCATTCCATTCACCATGGAGATTCT
TGGCAGAGATCTAACTATGACCATGGCGGCGCGCGGGCGCGTGCAGGGAACGTGTACTACGCGAACAACATGCCGAGCCC
GTGGCAGCAGAGCGGCGGCCCGTCGGACGGGCACGGCGGCGTGGGGTGGCACCTGCAGTACCCGCAGGGACAGGGGCCGC
TGAGCGAGGAGATGACGATGAGCGGGTCGCACGGGTCGGGGTCGTCGATGCCCCCGCCGCCGCCGGCCATCTTCGGGTCG
CAGAGCTCGTTCACGTACGAGGAGCTGGCGTCGGCCACGGGCGGGTTCTCCAAGGCGAACCTGCTGGGGCAGGGCGGGTT
CGGGTACGTGTACAAGGGCGTGCTGCCGGGCAGCGGCAAGGAGGTGGCGGTGAAGCAGCTCAAGGCCGGCAGCGGGCAGG
GCGAGCGCGAGTTCCAGGCGGAGGTGGAGATCATCAGCCGCGTCCACCACCGCCACCTCGTCTCCCTCGTCGGCTACTGC
ATCGCCGGCGCCTCCCAGCGCCTGCTCGTCTACGAGTTCGTCGCCAACGACACCCTCGAGCGCCACCTCCACGGGAAGGA
CCTGCCGGTCATGGACTGGCCCAAGAGGCTCGCCATCGCGCTCGGCTCCGCCAAGGGCCTGGCGTACCTGCACGAAGACT
GTAAGTTTCTTCTCCTCTTCTTCTGGCCACATCGATCCATGGCGTTCTACGTCCTTCTGATGTCGTGCATTATCAAGGCA
ATCCAAGGATCATCCACCGTGACATCAAGGCGGCCAACATTCTCTTGGACGAAAATTTCGAGGCCAAGGTGATTAATCTG
TGAGATTTGTGAATCACAGTGCA-CGAAATTTGTAAGATTTGGAGTGAAAACTGGTACGAATGTTGGCAGGTCGCGGATT
TCGGGCTCGCCAAGTTGACGACGGACAACAACACCCACGTCTCCACGCGCGTCATGGGAACGTTCGGGTGAGCAGAGCAC
GCACGCACGCTGAGCAGAGCAGAGCAGCAAGTGTCGCCATTGCGGCACCATGGGAGCAGAGCTCGAGCGTTAATGTCTTC
TCCGCTGGTGGCTCGTGC----AGGTACCTGGCGCCGGAGTACGCCTCCAGCGGCAAGCTGACGGACAAGTCGGACGTCT
TCTCCTTCGGCGTCATGATGCTCGAGCTCATCACCGGCCGGCGGCCCGTCGACCCCAGCAACTACATGGAGGACAGCCTG
GTGGACTGGGCGAGGCCGCTCCTGGCGCGCGCGCTGTCGGAGGGCGGCAGCTTCGACGAGGTGGTCGACCAGCGCCTGGA
GAACAAGTACGACCGGCAGGAGATGGAGCGCATGGCCGCCAGCGCCGCCGCCGCCGTCCGGCACTCCGCCAAGCGCCGCC
CCAAGATGAAACAGGTGGAGATCGATCGATCGATCGACAGCTCTCGATCGATGCTGAGCAACTCGCCGTGAGCTGACAGT
GATTCTTGCACCGTTTGTACAGATCGTTCGCGCGCTGGAGGGCGACGCGTCGCTGGACGACCTGAACGAAGGGATGAAGC
CAGGGCAGAGCATGATATACAGCTCCGACGAGTCCGGGAGCTACGCGGCCAACATTAACAGGCTTTGGCAGGTCGCGTTC
GAGAGTAGCGAGGAGTACACCAACGAGTACAGCGGGACGGGGGAGTCGGGGGAGACAACACAACGGCATCACTAACCATT
AATCCC-TTCGAGGAGCTCTTCACCGTATATATGGATCTGTGATGTAAGTTGGCCGTGTAAAGGGAATCGTTTGGTGTAT
ATACGTACGAGGACGAGGTGTACACTATGGTTGATGATGATGTAACTGCTTCAATGCTTGTGAATCGGTGCTGTATTATC
GTGTAAA-TTTGATGTATCCGTGTACTTACATGATGTAATGCGCAGCTCTTCGGTTGTATTAGCTCAGTGGAAAGAGAAC
TTCAATGGAGAGCCTCGATATGTGGCATTGTTAGAGCATCCCTAGTCCTGTCCTTAAAATCCTTTGACTCCTA---AAAT
ATTTCTGGTTTGAGGAGTTAG-----------------------------------------------------------
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>chr4B_181
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--------------------GCTTGGCGCCGAGCCAGTCAATCCCTCCCGTCTGTGACGCATCCAACGGCCAACAACAAA
CTTACTATTTCGGCACTGTTCACCATCCGGCAAAACACCTTTGTTATGCCGCTTCTCCCATTTGATGTCACTT------T
TACCGTGGACTGCAAGAGAAGGAC--------TTCGACTCATCAACTGGTTCAGCTACGGCCTGCAAATGGCATGGCAAA
CACGAGCAGTAATACGGTTTTGACAGCTCCGCTCCAACGGCCTTCAACCCCCCGTTCTGCCTTGAGGCTAAAAATGGAGA
AAACATAAAGGACAGCAATGGCGAGTGTCCAAGAAATGTGACGAAACCTAGGCCACCCAA-GCCTACTTCCGTTGCCCCG
TCTCTCCAGCCCCGTTTCAACCCCTTCTTTCTCTTCTTCTTTCGCGAAAGAACAGGGGAAA-AAAGGAAGGTACATCATC
ATGGATGCTTCGACTCCCTCGCGTTTTCACGTCTTCGGTTCGAATTTCAGTGTCGCAGAGCCGAAGAATTTAATTTCTTT
A-CATGAAATCTGGTTTTGCATTTGCGTGGTTACCATTG-----------------------------------------
----ATCCCTTTTTGCGGGAATTTACGTC-GATTGTTGGTTCTCAAATGTGAGCTAAATTGGTGATCAACTTAGGTCTGA
AATCTCTAGGTCGCCATGGCTGCAGGGGTTCATTATGGGGAGGGCGACGGCGGCGAGGAGCTAGCGGCGTTCCGACCCAG
AGCATCTTCTAGGTGGTGGTGGTGGGGTCATCTTCACCGGGAAGAGCTCCATCGCGGCGAGCTGCGCGGGACGCTAACGA
GGAATCCTCCTATCAGCAATGGATGACTCGCCCCTAAGCCGCGGACCCCTGGCCCCCCTGCTAGGTAGTGGTCCACTGGA
CCCGTCGTCGTCGGCGGCGGCAGATTCGGATGGCTCGGGTGGATCATCGTCGGGAGCTTCGGATAGCTCGGGTGAATCGT
CGTCATCGGGATCCCCGCCGTCTCCCTCCGGCCCACAATCGTCCACGCAGTCGACCCCACCGCCAGGGTCCGAGGAGTCG
GCGCCGTCGCCGCCCTCGCCGTCTCTGTCACCGCCGCCGGCTACGCCAGCAGGTACCAGCGGGTCGCCCCCGG-------
--------------------------GTCAATCATCGCCGCCGGGATCAAATGCCATCCCGTCTCCGCAGGCTCCGAAGA
GCAACGGGGGCGGCGGC---------GGCTCCTCGGAGAGCGGGGGCGGTTCCAAGGGCGGGGGCGGTTCCAAG------
GGCAAGGGCGGGAGCAAGCAAGACGGTTCTCCGCCCGTGGAGGCCGTGGTCGTCGGCGTGGTGATCGGGGTCCTGGTCTT
CGCCCTGCTGCTGTGCATCGCCGCGTGCGTGTGCTGCGCCAGGAGGAGGAAGAAGAAGAGGCCGCCCATGGCCATGCCCT
TCTACACCGACCAGCATGGTACGGCCGGCAGGCGCGCGCATC----GCATCGTGCCCATTCCATTCACCATGGAGATCAT
TGGCAGAGATCTAACTGTGACCATGGCGGCGCGCGGGCGCGTGCAGGGAACGTGTACTACGCGAACAACATGCCGAGCCC
GTGGCAGCAGAGCGGCGGCCCGTCGGACGGGCACGGCGGCGTGGGGTGGCACCTGCAGTACCCGCCGGGACAGGGGCCGC
TGAGCGAGGAGATGACGATGAGCGGGTCGCAGGGGTCGGGGTCGTCGATGCCCCCGCCGCCGCCGGCCATCTTCGGGTCG
CAGAGCTCGTTCACGTACGAGGAGCTGGCGTCGGCCACGGGCGGGTTCTCCAAGGCGAACCTGCTGGGGCAGGGCGGGTT
CGGGTACGTGTACAAGGGCGTGCTGCCGGGGAGCGGCAAGGAGGTGGCGGTGAAGCAGCTCAAGGCCGGCAGCGGGCAGG
GCGAGCGCGAGTTCCAGGCGGAGGTGGAGATCATCAGCCGCGTCCACCACCGCCACCTCGTTTCCCTCGTCGGCTACTGC
ATCGCCGGCTCCTCCCAGCGCCTGCTCGTCTATGAGTTCGTCGCCAACGACACCCTCGAGCACCATCTCCACGGCAAGGG
CGTGCCGGTCATGGACTGGCGCAAGAGGCTCGCCATTGCGCTCGGCTCCGCCAAGGGCCTTGCGTATCTGCACGAAGACT
GTAAGTTTCTTCTC---TTCTTCTGGCCACATCAATCCATGGCGTTC---GTGCTTCTGATGTCGTGCATTATCAAGGCA
ATCCGAGGATCATCCACCGTGACATCAAGGCGGCCAACATTCTCTTGGACGAAAATTTCGAGGCCAAGGTGATTAATCTG
TGAGATTTGTGAATCACGGTGCAGCGAAATTTGTAAGATT-GGAGTGAAAACTCGTCTGAATGTTGGCAGGTCGCGGATT
TCGGGCTCGCAAAGCTGACGACGGACAACAACACGCACGTCTCCACGCGCGTCATGGGAACGTTCGGGTGAGCAGAGCAC
GCACGCACGCT-----GAGCAGAGCAGCAAGTGTCGCCATTGCGGCACCATGGGAGCAGAGCTCGAGCGTTAATGTCTTC
TCCGCTGGCGGCTCGTGC----AGGTACCTGGCGCCGGAGTACGCCTCCAGCGGCAAGCTGACGGACAAGTCGGACGTCT
TCTCCTTCGGCGTGATGATGCTCGAGCTCATCACCGGCCGGCGGCCCGTCGACCCCAGCAACTACATGGAGGACAGCCTG
GTGGACTGGGCGAGGCCGCTCTTGGCGCGCGCGCTGTCGGAGGGCGGCAACTTCGACGAGGTGGTGGACCCGCGCCTGGA
GAACAAGTACGACCGGCAGGAGATGGAGCGCATGGCCGCCAGCGCCGCCGCCACCGTCCGGCACTCCGCCAAGCGCCGCC
CCAAGATGAAACAGGTCAAGATCGGTCGA----------------GATCGATGCTAAGCAACTCGCCGTGAACTGACAGT
GATTCTTGCACCGTTTGTGTAGATTGTTCGCGCGCTGGAGGGTGACGCGTCGCTGGACGACCTGAACGAAGGGATGAAGC
CAGGGCAGAGCATGATATACAGCTCCGACGAGTCCGGCAGCTACGCGGCCAACATCAACAGGCTGAGGCAGATCGCGTTC
GAGAGTAGCGAGGAGTACACCAACGAGTACAGCGGGACGGGGGAGTCGGGGGAGACAACACAACGGCATCACTGACCATT
AATCCCCTTCGAGGAGCTCTTCACCGTATGA----ATCTGTGATGTAAGTTGGCCGTGTAAAGGGAATCGATTGG-GTAT
ATACAT------ACGAGGTGTACACTGTGGTTGATGATGATGTAACTGCTTCAATGCTTGTGAATCGGTGCTGTATTATC
GTGTAAA-TT-GATGTATCCGTGTACTTACATGATGTAATGCGCAGCTCTTCGGTTGTATTAGCTCAGTGGAAAGAGAAC
TTCAATGGAGAGCCTCCATATGTGGCATTGTTAGAGCATCCCTACTCCTGTCCTTAAAATCCTTTGACTCCTA---AAAA
ATTTCTGGTTTGAGGAGTTAG-----------------------------------------------------------
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>SNPs
-----S-----------------------S-------------SS------------S---S---------S-S------
-----------S-------------------------------S---S-----------------S--------------
-----S------------------------------------------------------------S------S------
---S----S--------------------------------S-----------------------SS--SS-SSSSS---
--------------------------S---------------------S-------------------------------
----------------------------------S------S--------S-----------------------------
------------------------------------------------------S-----S------------SS-----
-------S--------------------------------------S--------------S----------------S-
------------------------------------------------------------------------------S-
---S----------------------------------------------------------------------------
------------------------S--SSS-----S--------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------S-----------------------------------S-----------
---------------------------------------------------S-S---------------S----------
-----------------------------------------------------------------------SS-------
-------------------------S---------------------------S---------S----------------
--------------------------S----SSS-----------S----------------------------------
----------S-------------S------------------------S-----------------S------------
-------------------------S------------------------------------------------------
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---------------S----------S-----------------------------------------------------
----------------------SS-----------------------------S-----------S---S----------
---------------SS------------------S-----------------------S--------------------
-----------------------------------S--------S-----------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
------------------------------------------------------------S--------------S----
------S------------------------------------------------------------------S------
-------------------------------------------------S--------------S----------SS---
-------------------------------S--S--------------------S------------------------
----------------------------------------------------------S---------------------
----------SSSSSSS------------------------------------------------------S--------
-------S---S------SSSS-----S-----------------S----------------------------------
----------------------S--------------------------S--------S---------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--S-----S-------S------------------S-------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------S-----------------------
---------S----------------S---------S-------------------------------------------
--------------------------------------------------------------------S-----------
-------S-------------------------------------------S----------------------------
---------------------S------------------------S------S-------------------SSS----
--S----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_829
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---------TTTTTGCGGGAATTTGCGGT---------------------------------------------------
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>reverse_2736
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---------------GAACAGAGCAGCAAGTGTCG---------------------------------------------
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-------------------------------------------------------
>forward_2100
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GGGTACGTGTACAAGGGCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_4124
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATAGTCGGTCAACCAGACGC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
