>input_sequence_34381
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-------ATGATGCTGGGCTCGGAGGCGGTGTGGCTCGACCTGCCGCCCTCGGGGACCAAGTGCGTCTCCGAGGAGATCC
AGCCCAACGTGGTGGTGGTCGCGGACTACATGCTCATGTACGAGGCCCACGCCACCGCCCACCCCACCGTCGCCGTCAAG
GTAAGCGCGGCGCGATCCCCTCCCTTCGTCTTCGCATGTTTGCTTT-CTTGTTCCAGTGGTTTGATCTTGATCTAGACCG
GTGAACTCTCGCGTGTTGGGATCCAGGTGCAGGCGACTTTGGGGGCGATAGATACTAGCTTGTTTTAATTATTTGTG---
TTAAGTTTAGTTGGTGGATTGAACTTTTTGAGTCAAAATTAGAGCCTCCGTGGCAATTGAATTTGGGCATTTTTAGAAGA
GAAAACT-----------------GACCAGCTTAAGTTAACATCTCCTAGAGAAGTCAACAGGCAAAAGTTTTACATTTA
GTGTAAGTTGGTGCACAGGGTCTGTGCTATGTGGATTATGGTAAGGTTAAATGATGTTAATCCAGTACTCCAGTAGTTTG
TCATGAATCTGCTCATATGCTCCAGTGCTTTGTTCTGGAGGAAGCA--GCTGAGGTTTGAACCGTTGAGCTAGACATGGT
GGACTTGATGCGAATTGACCCAAAGTGCCACTTCCT-----------AGTTGCTTCACATCGGGGCAACATGCTGTGGAC
TGATAATTTCTATGCATG-TAGCAATATCCCAAGTAACGTGACCTGCAGCTGCAGGA---------CTCTTTGGGCACCT
GGCA-CCTATTATTAGAATAGCATGGTCGTAGGTACTGAGACTAATAAAAGATGATTGGGGTTA-----------AGAAA
ACAAGCGAGGGATGGATTGTTATTCATTATCACC--------GCTATGGATGGGCTGATGAGATTCTGGTAAGATGCAAT
CATGTTTGCATGTGGGCAGACGGATGAACATACA-GGGATATGACATAAGGTCCCACTTCTCACCCATCCTGTTGTAGAT
AATGAGAACTTCAGATTTCAGACTCATGATGTGTGTTGCGCAATCCAGGGAACCAGAGATTCGATGATACATGTGTATTG
TAGCTCATAACTGG----AAAAGTACCAGTAAGTAACTGGGATTAGCCACATGTTCACAACTCTGTCGTTCATATGTCCA
AGAATTCTGCAAGCAACACATGGATGTTGTATTGTACTTTTGCGGTGCCTATGTTTTCTTCTGTAAAACTTTTGTGGTGG
CTAAATGGTGCTTTGGCATGCTGAGTGTGTATGAATATGGTGACTTTTTTTGCTAATGTTCACACACATAATTAGCATAG
CATGTCCATATATCAGTTAGTCTTATGGAAGATTTTTTTAGAAATGATGATTTCTGAAGACAATTT--TTTTTT---CTT
GCTTACTCATTTGTATTGTACATGT-------TTGTGTAGGTTACCTCACCATATGGCAATACTGTACATCACAAAGAAA
ATGCCACAGTGGGCCAGTTTGCATTTACAACTTCAGAAGCTGGAAACTACCTTGCTTGCTTCTGGCTAGACAGCGCAGAG
AAAGGATCAGGAGTATCTCTAAATCTTGATTGGAAGATAGGGATTGCGACAAAGGACTGGGACTCTGTTGCCAAGAAGGA
GAAGATTGAGGTGTGCCAATTATTTAAATACACCTAGTCCAAATGGCACTATACTTCAATGTAATGCATTGTTTTTTGTT
CCTGATTATTT-TAATCTGAAA--TTTCTGTGTTCAGGGTGTTGAATTAGAGCTCGCGAAACTTGAAGCTGCAGTGGAAT
CCATTCATCATAACTTATTATATCTCAAAGCAAGGCAAGTTATCTATTCTACTTTTTGTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGTGTTTTAATAGCCAGACAACAGATTGTGGTCGTTGTGCTACGTTGCACCAGTC---------
-------------------TATTTAGGTAGGGGAGTCTGTAGTCTGTACTATTTCCAGTTGGATGTTTTTATATAGGCTA
AATATAAATATACTTTGAACTAACTGTTACATATAAAAGTTGGTGACTATGAAACTACAGCATTGTGATTTGTGAAACAG
AACCTACGGGTCTCATCTGTCTTGGGCTG----------TAGATTGAGCTGCTATTTGAAGTTCTTAGGTGGTCTTACAG
TTC-----------------TTGGGATATGGACAAGCAAACCTACTAGCTTTACTTATCTTTACTACAATATAA-TATTT
GGAACTGGCAATGCATAGCATAATGCGTGATCTTGATGTGTTTATGCAGGGAAGCGGAGATGCGGGAAGTGAGCGAGAAA
ACGAATTCCAGGGTTGCCTGGTTCAGCATCTTGTCACTGGGCGTGTGCATTGTGGTCTCCGCTCTGCAGCTATGGCATTT
GCAAGGCTTCTTCCAGAAGAAGAAGCTCATCTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7A_1_TraesCS7A01G169500
TAGTTCCTGGTCTTGGTGTAGTCCCATCTAGGATGACCGCAACACGATTTGGCCCATAGGAATTTTGGTGAAGAAGCTCA
GTTTTGTGCTTGATGCATGAAGCATAGTTTTGTTCTGGTGCATAACCTAATGCAGCCAGCATAGGGCGCTCCTCCTCATC
ATTTATAGCGTCGATTGGGGAACCAACACCCATGCGATAGTTATTGGGCCGTAGTCCATTAGCGCCGCTCTCGCTACTTC
GCTCGTGTGGTTTAGCTAGCCAAAATTTTGTTTGCGCTAGCTGCTAGCTAAAAAACAGCTCTCAGTTTTTTGGGTATAAT
TTTAAAAATCCACATATTCAAATAAAATGCTTCTGAGTTTGAAAGGTTCAAAAAT--AAAAAAGTTCATGAATTCAAAAA
AAATCATGAATTAA--AAAATTCATGATTTTAAAAAATTCCACGAACTCAAAAAATGTTCACGAATTATAAAAAATGTAA
ATTAAAAAATTCTGACGAATTAGAAAAAACGAATTTGAAAATTTTTCACTGATTTTAGAAATGTTCAGGATTGTTTTTAA
AAGTTCATGGATTTTTAAAGTTAAAATTTAAAACTAAAAAAATGAACA----AAAACCTGCCCCCAAAAGAAGAAAAAAC
CGGTTATTCACAAAACGAGAGCGAGCCTTCCGAGCCCATTACAGGCGATACAGATGGTCCAGCCCACTAGCTGTGCCTTC
GGCGAAAACAG---TAGAAACCGGCGCTCCTCGGGCC------------------------------------AAAAAAA
AGCAGCACGTCGCGCGTGGGTAAGGAATTTCTTCGCGTGCACCCAAACGG--AG--------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TACATAATTCCAAAAAGACCCTCCCCCG
GGCCAACGCCACGCCATTACTACCGTCCAACGCTACTCCAAGCTCCACACGATTTCCCCAACCGGAGACTCGGACAGACA
GGGTCGCCCAGATCGGAGCAGATGACGGCGGCAGCGGGAGCGGCGACCCGGCCGGCGCTGGTGGTGGGGGCGCTCGTGGC
GGCGCTGATGATGCTGGGCTCGGAGGCGGTGTGGCTCGACCTGCCGCCCTCGGGGACCAAGTGCGTCTCCGAGGAGATCC
AGCCCAACGTGGTGGTGGTCGCGGACTACATGCTCATGTACGAGGCCCACGCCACCGCCCACCCCACCGTCGCCGTCAAG
GTAAGCGCGGCGCGATCCCCTCCCTTCGTCTTCGCATGTTTGCTTT-CTTGTTCCAGTGGTTTGATCTTGATCTAGACCG
GTGAACTCTCGCGTGTTGGGATCCAGGTGCAGGCGACTTTGGGGGCGATAGATACTAGCTTGTTTTAATTATTTGTG---
TTAAGTTTAGTTGGTGGATTGAACTTTTTGAGTCAAAATTAGAGCCTCCGTGGCAATTGAATTTGGGCATTTTTAGAAGA
GAAAACT-----------------GACCAGCTTAAGTTAACATCTCCTAGAGAAGTCAACAGGCAAAAGTTTTACATTTA
GTGTAAGTTGGTGCACAGGGTCTGTGCTATGTGGATTATGGTAAGGTTAAATGATGTTAATCCAGTACTCCAGTAGTTTG
TCATGAATCTGCTCATATGCTCCAGTGCTTTGTTCTGGAGGAAGCA--GCTGAGGTTTGAACCGTTGAGCTAGACATGGT
GGACTTGATGCGAATTGACCCAAAGTGCCACTTCCT-----------AGTTGCTTCACATCGGGGCAACATGCTGTGGAC
TGATAATTTCTATGCATG-TAGCAATATCCCAAGTAACGTGACCTGCAGCTGCAGGA---------CTCTTTGGGCACCT
GGCA-CCTATTATTAGAATAGCATGGTCGTAGGTACTGAGACTAATAAAAGATGATTGGGGTTA-----------AGAAA
ACAAGCGAGGGATGGATTGTTATTCATTATCACC--------GCTATGGATGGGCTGATGAGATTCTGGTAAGATGCAAT
CATGTTTGCATGTGGGCAGACGGATGAACATACA-GGGATATGACATAAGGTCCCACTTCTCACCCATCCTGTTGTAGAT
AATGAGAACTTCAGATTTCAGACTCATGATGTGTGTTGCGCAATCCAGGGAACCAGAGATTCGATGATACATGTGTATTG
TAGCTCATAACTGG----AAAAGTACCAGTAAGTAACTGGGATTAGCCACATGTTCACAACTCTGTCGTTCATATGTCCA
AGAATTCTGCAAGCAACACATGGATGTTGTATTGTACTTTTGCGGTGCCTATGTTTTCTTCTGTAAAACTTTTGTGGTGG
CTAAATGGTGCTTTGGCATGCTGAGTGTGTATGAATATGGTGACTTTTTTTGCTAATGTTCACACACATAATTAGCATAG
CATGTCCATATATCAGTTAGTCTTATGGAAGATTTTTTTAGAAATGATGATTTCTGAAGACAATTT--TTTTTT---CTT
GCTTACTCATTTGTATTGTACATGT-------TTGTGTAGGTTACCTCACCATATGGCAATACTGTACATCACAAAGAAA
ATGCCACAGTGGGCCAGTTTGCATTTACAACTTCAGAAGCTGGAAACTACCTTGCTTGCTTCTGGCTAGACAGCGCAGAG
AAAGGATCAGGAGTATCTCTAAATCTTGATTGGAAGATAGGGATTGCGACAAAGGACTGGGACTCTGTTGCCAAGAAGGA
GAAGATTGAGGTGTGCCAATTATTTAAATACACCTAGTCCAAATGGCACTATACTTCAATGTAATGCATTGTTTTTTGTT
CCTGATTATTT-TAATCTGAAA--TTTCTGTGTTCAGGGTGTTGAATTAGAGCTCGCGAAACTTGAAGCTGCAGTGGAAT
CCATTCATCATAACTTATTATATCTCAAAGCAAGGCAAGTTATCTATTCTACTTTTTGTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGTGTTTTAATAGCCAGACAACAGATTGTGGTCGTTGTGCTACGTTGCACCAGTC---------
-------------------TATTTAGGTAGGGGAGTCTGTAGTCTGTACTATTTCCAGTTGGATGTTTTTATATAGGCTA
AATATAAATATACTTTGAACTAACTGTTACATATAAAAGTTGGTGACTATGAAACTACAGCATTGTGATTTGTGAAACAG
AACCTACGGGTCTCATCTGTCTTGGGCTG----------TAGATTGAGCTGCTATTTGAAGTTCTTAGGTGGTCTTACAG
TTC-----------------TTGGGATATGGACAAGCAAACCTACTAGCTTTACTTATCTTTACTACAATATAA-TATTT
GGAACTGGCAATGCATAGCATAATGCGTGATCTTGATGTGTTTATGCAGGGAAGCGGAGATGCGGGAAGTGAGCGAGAAA
ACGAATTCCAGGGTTGCCTGGTTCAGCATCTTGTCACTGGGCGTGTGCATTGTGGTCTCCGCTCTGCAGCTATGGCATTT
GCAAGGCTTCTTCCAGAAGAAGAAGCTCATCTGAATTCACTCGTTTCACCATGTACTCCTGTGCTGTTAACTACCTTAGC
AAGAGGACAGTTTTGTCGTATTTATTTCGACAAACTCATGTGATGGACAAAACAGTTCCCTGGTACAAGATACATGATTT
CAATACCAAGCAGTTCCTTGGTGTTTGGTGCTTGATACATGATATTATGTGCAATAGAAATATTTTCAAATCTGCTACTT
CTAGGATTATATTTGGCCTTTGTGTGTGACATAGTATATATAGATTGTGAAATTTTATCATTGTCTCATCTGAATTTCTT
TTGGTACCAGGGAATTGAAATACTCCTAGTATTAAAATTTATTACCATCTACTCCCTTCGTTCCATAATATAGAAGTGTT
TTTGATACTACGCTTTGACGGAGGGAGTATTTTCTTGCCGGGGTAATTAGAGCTAGGGGAACTTCAAATCTATTGTTTGG
CTGGAGGGATTGAGAATTCACAAGGGAATATGCATAAGACTTGAGACTCCAACTAACAGGCGAGGGAGTGTGCTGAAAGG
GAATTGTTTTAGTGAGTCAATCGTAACCCTTCATCCTAACTTCTCTTGTCTAGTCCCTTGTCAATTCTCATGAACCAAAT
AAGGGAGTACAATTTCTTCGCAAATTGTCAAACATAATAATTCCTATCATGCACCAAACAGAGGATTGGGATAAAACGAC
TTATCTCATGTCTAATCTCAATACAACTCCTTACTTTAAACTCTCATTCCCCCTCTCAAATACTCCCCCCGTCCGAAAAA
GCTTTCTCTCAAATGGATGTATCTAACATCAAGTTAGTGCTAAATACATTCATTTTAGGGACAAATTTGAGACAAGTTTT
TTTGGATGAAGGGAGTATTGCCAAACATGCTGTAGAGCACTTGGGGCCTGTTTGGTTTGCGCCCTAAGCTTGCCACGCCT
AACCTTAGTCGTGCCACAATAGCTTAGGCATATATTTGGTTTATTGCCATATTTGTGGCTTGCCACACTTTTCT
>chr7B_331
CACAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATTCAAATAAAATGTTCCCGAGTTTGAAAAGTTCAAAAATTTAAAAGTGTTCACAAATTC-AAAA
AAATCATGAATTAAGAAAAGTTCAAGAATTTTAAAAATCTCACGAACTAAAAAAAATGTTCATAATCTCAA---------
--TAAAAAATGTTGATGAATTAGAAAAAACGAATTTGGAAAAATTTCACCGCTTTGAAAAATGTTCACGATTCTTTTTAA
AAGTGCATGGAATTTTAA-ATTCAAATTTAAAACGAAAATAAAAAA-TGAACAAAACCTGCCCAAAAAAGAAGAAGAAAC
CGGTTCTTCACAAAACCATAGCGAGCCTTCCGAGCCCATTACAGGCGATACAGATGGTCCAGACCACTAGCTGTGCCTTC
TGCGAAAACAGTACTAGAAACCGGCGCTCCCCGGGCCG-----AAGGCAGCACGTCTCGCGTGTTGCCCAAAAAAAAAAA
GGCAGCATGT--CGCGTGGGTAAGGAATTTCTTCGCGTGCACCCGAACGGGAAG--------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TACATAATTCCAAAAAGACCCTCCCCCG
GGCCAACCCCACGCCATTACTCCCGTCCAACGCTAGTCCAAGCTCCACACGATTTCCCCAACCGGAGACTCGGACAGACA
GGGTCGCCCAGATCGGAGCATATGGCGGCGGCAGCGGGAGCGGCGACCCGGCCGGCGCTGGTGGTTGGTGCGCTCGTGGC
GGCGCTGATGATGCTGTGCGCGGAGGCGGTGTGGCTCGACCTGCCGCCCACGGGGACCAAGTGCGTCTCCGAGGAGATCC
AGCCCAACGTGGTGGTGGTCGCGGACTACATGCTCATGTACGAGGCCCACGCCACCGCCCATCCCACCGTCGCCGTCAAG
GTAAGCGCGGCGCGATCCCCTCCCTTTGTCTTCGCGTGCTTGCTTTTCTGGTTCCAGCGGTTTGATCTTGATCTGGACGG
GTGAACTCTCGCGTGTTGGGATCCATGCGTAGGCGGATTTGGGCGCGACAGATACTAGCTTGTTCTAATTATTTGTGTTA
TTAAGTTTAGTTGGTGGATTGAACTTTTTGAGTCAAAATCAGAGCCTCCGTGCCAATTGAATTTGGGCGTTTTTAGAAGA
ATTGAGAGAATAGAAGAGAAAACGGACCAGTTCAAGTTAACATTTCCTAGAGAAGTCAACAGGCAAAAGTTTTACATTTA
GTGTAATTTGGTGCATAGGGTCTGTGTTATGTGGATTATGGTAAGGTTAAATGCTGTTAATCCAGTA--------GTTTG
TGATGAATTTGCTCATATGCTCCAGTGCTTTGTTCTGGAGGAACCA--GCTGAGGTTTGACCCGTTGAGCTAGACTGGGT
GGACTTGATGCGAATTGACTCAAAGTGCCACTTCCT-----------A-----------TCGGGGCAACATGTTGTGGAT
TGATAATTTCTATGCATG-TAGCAATATCCTAAGTAACGTGACCTGCAGCTGCAGGACA--ACCTTCTCTTTGGGCACCT
GGCATCCCATTATTAGAATAGCATGGTCGTAGGTACTGAGACTAATTAAAGATGATTGGGGTTAACCATAACAAGAGAAA
ACAAGCGAGGGGTGGATTGTTATTCATTATCACT--------GCCATGGATGGGCTGATGAGATTCTGGTAAGATGCAAT
CATGTTTGCATGTGGGCATACGGGTGAACACACA-GGAG-ATGACATACTGTCCCACTTCTCATCCATTCTGTTGTAGAT
AAGGAGAACTTCAGATTTCAGATTCATGATGTGTTTTGCGCAATACAGGGATTCAGAGATTC-ATGATACATGTGTATTG
TAGCTCATAATAACTGGAAAAAAGTACC---GGTAACTGGGATTAGCCACACGTTCACAACTTTGTCGTTCATATGTCCA
AGAATTCTGCAAGCAACACATGGATGTTGTATTGTACTTTTGTGGTGACTATGTTTTCTAATGTAAAACTTTTGCGGTGG
CTAAATGGTGCTTTGGCATGCTAAGTGTGTATGAGTATGATAACCTTTTTTGCTAGTTATCACACGCATAATTAGCATAG
CATCTACATATATCAGTTAGTCTTATGGAAGATTTC-TTAGAAATGATGATTTCTGAAGACTATTT--TTTTTCTTGCTT
ACTGGCTCATTTGTATTGTCCATGTTTGTGTTTTGTGTAGGTTACCTCACCATATGGCAATACTGTACATCAGAAAGAAA
ATGCCACAGTGGGCCAATTTGCATTTACAACTTCAGAAGCTGGAAACTACCTTGCTTGCTTCTGGCTAGACAGCGCAGAG
AAAGGATCAGGAGTATCTCTGAATCTTGATTGGAAGATAGGGATTGCAACAAAGGACTGGGACTCTGTTGCCAAGAAGGA
GAAAATTGAGGTGTGTCAATTATTTAAATGCACCTAATCCAAATGGCACTATACTTCAATGTAATGCATTGTTTTTTGTT
CCTGATTATTTCTAATCTGAAATTTTTATGTGTTCAGGGTGTTGAATTAGAGCTCGCGAAACTTGAAGCTGCAGTGGAAT
CCATTCATCATAACTTATTATATCTCAAAGCAAGGCAAGTTATCTATTCTACTTTTGTACTCCCTCCGTTCCAAAATAGA
TGACTCAACTTTGTACTAACTTTAGTACAAAGTTGGGTCATCCAAGGTTGTCAGAATCGTGATTTTGAATCGGATCGGAG
CTCTGATGGTAGGACCGCAAATCGTAGAATCTTCACTATCAGGATCGTAAAAACGTAGATTCTATGAGCTAAAATCGTAG
AATGAGATGGGTTAGTTTGGATCGTAAAGTTGTAGCATCGTATAATAGAATCGCGATTCTGACAACCTTCTCATCTATTT
TGGAACGGAGGGAGTATGTGTTTTAATAGCCAGATAATAGACTGCGGTTGTTATGCTATGCTGCGCCAGGTGT-------
-----------------------------------TCTGTAGTCTGTACTATTTCCAGTTGGATGTTTTATGTATGTAA-
---ATAAATATGCTTTCAACGAAATGATTTACAGAAAAATTGGTGACTGTAAAGCTAAAACA-------TTGTGAAACAG
AACCTACTGGTCTCATCTTCATCTGTCTTAGGAAAGTGTTATATTGAACTGCTATTTGAAACTCTTAGGTGGTCACTGTT
TTT-GTACTGGATGAGATGTTTGGGACATAGACAAACAGAACTACTAGCTTTACTTAC------------------ATTT
TGAACGGGCAATGCATGACATAATGCGTGATCTTGATATGTTTATGCAGGGAAGCGGAGATGCGGGAAGTGAGTGAGAAA
ACAAATTCTAGGGTTGCGTGGTTCAGCATCTTGTCTCTGGGCGTGTGCGTTGTGGTCTCCGCTCTGCAGTTATGGCATTT
GCAAGGCTTCTTCCAGAAGAAGAAGCTCATCTGAGTTCACTCGTTTCACCATGTACTCCTGTGTTGTTAACTACCTTAGC
AAGAGGACAGTTTTGTCGTATTTATTTCGACAAACTCATGTGGTGGACAAAAAGGTTCCCTGGTACAAGATACATGATTT
CAATAGCAAGCAGTTCCTTGGTGGTTGGTGCTTGATACATGATATTATGTGCAATAGAAATATTTTCAAATCTACTACTT
-TGGGAT--TATTTGGCCTTTGTGTATGACATA-----------------------------------------------
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--------------------------------------------------------------------------
>chr7D_457
--------------------------------------------------------------------------------
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------------------------------------------------------------ACGAATTCAAAAATATATAA
ATTAAAAAATGCCAACGAATTAGAAGAAACGAATTTGGAAAAG-TTCACTGATTTAAAAAATGTTCACGATTGTTTTAAA
AAGTGCATGGAATTTTAATATTCAAATTTAAAACGAAAATAAAAAAATGAACAAAACCTGCCCAAGAAAGAAGAAGAAAC
CGGTTCTTCATAATACCAGAGCGAGCCTTCCGAGGCCATTACAGGCGATACAGATGGTCCAGCCCACTAGCTGTGCCTTC
TGCGAAAACAG---TAGAAACCGACGCTCCTCGGGCCCTGCCTAAGGCAGCACG--TCGCGTGTTGCTAAAAAAAAAAAA
A----CACGT--CCCGTGGGTAAGGAATTTCTTCGCGTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCACCCGAACAGAAACTACATAATTCCAAAAAGACCCTCCCCCG
GGCCAACGCCACGCCATTACTACCGTCCAACGCTAGTCCAAGCTCCACACGATTTCCCCAACCGGAGACTCGGGCAGCCA
GGGTCGCGCAGATCGGAGCAGATGGCGGCGGCAGCGGGAGCGGCGACCCGGCCGGCGCTGGTGCTGGGGGCGCTCGTGGC
GGCGCTGATGATGCTGGGCGCGGAGGCGGTGTGGCTCGACCTGCCCCCCACGGGAACCAAGTGCGTCTCCGAGGAGATCC
AGCCCAACGTGGTGGTGGTCGCGGACTACATGCTCATGTACGAGGCCCACGCCACCGCCCACCCCACCGTCGCCGTCAAG
GTAAGCGCGGCGCGATCCCCTCCCTTCGTCTTCGCCTGTTTGCTTT-CTGGTTTCAGTGGTTTGACCTTGATCTGGACCG
GTGAACTCTCGCGTGTTGGGATCCAGGCGTACGCGAATTTGTGGGCACCAAATACTAGCTTGTTCTATTTATCTGTG---
TTAGGTTTAGTTGGTGGATTGAACTTTTTGAGTCAAAATTAGAGCCTCTGTGGCAATTGAATTTGGGCATTTTTAGAATA
ATTGAGAGAATAAAAGAGAAAACAGGCCAATTTAAGTTAACATCTCCTAGAGAAGTCAACAGGCAAAAGTTTTACATTTA
ATGTAGTTTGGTGCATAGGGTCTGTGTTATGTGGATTATGGTAAGGTTAAATGCTGTTAATCCAGTA--------GTTTG
TGATGAATTTGCTCATATGCTCCAGTGCTTTGTTCTGGAGGAACCACAGCTGAGGTTTGAACCGGTGAGCTAGACTGGGT
GGACTTGATGCGAATTGACTCAAAGTGCCACTTCCTAATTGCTGCACA-----------TCGGGGCAACATGCTGTGGAT
TGATAATTTCTATGCATGATAGCAATATCCTAAGTAACGTGACCTGCAGCTGCAGGACTCCACCATCTCTTTGGGCACCT
GGCATCCTATTATTAGAATAGCATGGTCGTAGGTACCGAGACTAATAAAAGATGATTGGGGATAACCATAACAAGAGAAA
ACAAGCGAGGGATGGATTGTTATTCATTATCACTGCTATAGTGCTATGGATGGGCTGATGAGATTCTGGTAAGATGCAAT
AATGTTTGCATGTGGGCAGACGGGTGAACATACAGGGAG-ATGACATACGGTCCCACTTCTCACCCATCCTGTTGTAGAT
AATGAGAACTTCAGATTTTAGACTAATGATGTGTGCTGCGCAATCCAGGGAACCAGAGATTCGATGATACATGTGTATTG
TAGCTCATGACTGG----AAAAAGTACC---AGTAACTGGGATTAGCCACACTTTCACAACTCTGTCGTTCATATGTCCA
AGAATTCTGCAAGCAACACATGGATGTTGTATTGTACTTTTGCGGTGCCTATGTTTTCTTCTGTAAAACTTTTGTGGTGG
CTAAATGGTGCTTTGGCATGCGGAGTGTTTATGAATATTGTGACTTTTTTTGCTAATGTTCACACACATAATTAGCTTAG
CATGTCCATATATCAGTTAGTCTTGTGGAAGATTTC-TTAGAAATGATGATTTCTGAAGACTATTTTTTTTTTCTTGCTT
ACT----CATTTGTATTGTACATGTTTGTGTTTTGTGTAGGTTACCTCACCGTATGGCAATACTGTACATCACAAAGAAA
ATGCCACAGTGGGCCAATTTGCATTTACAACTTCAGAAGCTGGAAACTACCTTGCTTGCTTCTGGCTAGACAGCGCAGAG
AAAGGATCAGGAGTATCTCTAAATCTTGATTGGAAGATAGGGATTGCGACAAAGGACTGGGACTCTGTTGCCAAGAAGGA
GAAAATTGAGGTGTGTCGATTATTTAAATACACCTTAATCTAAATGGC----ACTACAATGTAATGCATTGTTTTTTGTT
CCTGATTATTATTAGTCTGACA--TTTCTGTGTTCAGGGTGTTGAATTAGAGCTCGCGAAACTTGAAGCTGCAGTGGAAT
CCATTCATCATAACTTGTTATATCTCAAAGCAAGGCAAGTTATCTATTCTACTTTTT--G--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGTGTTTCAATAGCCAGACTACAGATTCTGGTCGTTGTGCTACGCTGCACCAGTCTTGGGCTGT
AGATTGTATCAGTTAGTCTTATTTAGGTAGGGGAGTCTGTAGTCTGTACTATTTCCAGTTGGATGTTTCTATATAGGCTA
AATATAAATATACTTTCAACTAACTGTTATATATAAAAGTTGGTGACTATAAAACTACAGCATTGTGATTTGTGAAACAG
AACCTACGGGTCTCATCTGTCTTGGGCTG----------TAGATTGAGCTGCCATTTGAAATTCTTAGGTAGTCTTACTG
TTTCGTACTGGATGAGATATTTGGGACATGGACAAGCAAAACTAGCAGCTTTACTTAACTTTACTAACAGTGTAGTATTT
CGAACGGGCAATGCGTAGCATAATGCGTGATCTTGATATGTTTATGCAGGGAAGCGGAGATGCGGGAAGTGAGTGAGAAA
ACAAATTCAAGGGTTGCCTGGTTCAGCATCTTGTCACTGGGCGTGTGCGTTGTGGTCTCCGCTCTGCAGCTATGGCATTT
GCAAGGATTCTTCCAGAAGAAGAAGCTCATCTGAATTCACTCGTTTCACCATGTACTCCTGTGTTGTTAACTACCTTAGC
AAGAGGACAGTTTTGTCGTATTTATTTCGACAAACTCATGTGATGGACAAAACGGTTCCCTGGTACAAGATCCATGATTT
CAATAGCAAGCAGTTCCCTGGTACATT--------------ATATTATGTGCAATAGAAATATTTTCAAATCTGCTACTT
CTGGGAT--CATTCGGCCTTTGTGTATA--ATAACATATATAAATTGTGAAACTTTATCCTTGTCTCA------------
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--------------------------------------------------------------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--------------S-S-S----------S----------------SS-----SS-----S----
-------------------S----S--S---S------SS--------S------SSS-S-------SS----S--S---
----------S--------------------------S---SS------------S-S---------S------------
----S------S------SS--S-----------S----S--SS--SS---------------SS----------S----
-----S----------S---------------------------------------------------------------
S-------------------------------------------------------------------------------
----------SS--------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------S-------------------------------------------------------
-------------------S-----------------------------S------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------S------------------------S-----
---------------------------S-S------S-----------S---------------S---------------
--------------------------------------------------------------------------------
SSSS-SS-----------------------S-------------------------------------------------
------S--------S----------S--------------------------S-------------SSSSSSSS-----
-S------S----------------------------------S-------------------------------SS---
-------------------S----------------------------SSSSSSSSSSS--------------------S
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-----------------------S-------------SSS--------S-------------------------------
--------------------------------------------------------------------------------
----------------------SSSS-SSSS--------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SS------------------------S-----------S------
S--SS---------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------S--------------------S-------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------S------------S--------------------S-----------------------------
------------------------------------------------------------S-----------------S-
--S-----------------------S-------------S----------------S--------SS-SSSS-------
S----S-------------------------------S-----------------------------------S------
--S-----S---------------------------------------S-------------------------------
---------------------------------------------------------------S----------------
-----------------------------------------------------S--------------------------
-----S-----------------S--------------------------------------------------------
--S----SS----------------S-------SS-------S---------S------S--------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTC
GCTCGTGTGGTTTAGCT---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_2209
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------AGGTCCCACTTCTCACCCAT------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_285
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTTTGTTTGCGCTAGCTGCT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_2372
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------TGTTCACAACTCTGTCGTTCA--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>forward_625
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATGAACAAAAACCTGCCCCC---------------
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--------------------------------------------------------------------------
>reverse_2737
--------------------------------------------------------------------------------
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----------------GTTTGCATTTACAACTTCAGAAGCT---------------------------------------
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--------------------------------------------------------------------------
>forward_1894
--------------------------------------------------------------------------------
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----------------------------------AGTGCCACTTCCTAGTTGCT--------------------------
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--------------------------------------------------------------------------
>reverse_3798
--------------------------------------------------------------------------------
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-------------------------------------GTGTTTATGCAGGGAAGCGG-----------------------
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--------------------------------------------------------------------------
>forward_3421
--------------------------------------------------------------------------------
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-----------------------------------------TTGTGGTCGTTGTGCTACGT-------------------
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--------------------------------------------------------------------------
>reverse_4840
--------------------------------------------------------------------------------
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---------------------------------------CTTGGGGCCTGTTTGGTTTG---------------------
--------------------------------------------------------------------------
