>input_sequence_34337
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----ATGAGACGGCCGCTCGGCGCATGCGGCAGCAGATCCAGCCCGGCCGCTGCTTTCCTCCTGGCCGCCGCCGCGATCT
GCGCCCAGTTCGCCACAGGTGCGTGCCCCCTCCGGCCCCGCTCGATCTGCTCTAACCCACCGGGATCTGCGAGTGGTATT
GGAGATCTGGTTGAGGGGCGTTGCCTGGGATTGGCGAAGAGTCGCCGGCCCGCTGATTGGGGGATTCAGGATTCCATTAT
TATCGTCAAGTGCAGAAATTATTATTGTCTGCGAGTCTATTTAATTATGAAGATTTGGATTTGGGCCGAAGAGCTCGCTA
TATCCCCGTGGTAGTTTCACTGATTTTTCATGAATAAATTCACCAGTTTAACCGTAAGATCCCGATTCCAGTCCAATACT
TTTGGCCTTTCGCCTCAGGTGGATTGGGTTGCTGTATCGTTTCTCGTGGAAGTCGAAATAAGAAATTACTCCCATGGGAC
AAATAGGCGCATGCGCTAGCTCCT---------TATCGAGGTTAAAACTATTTTGGAAAAATGCGTGCCAAAAATTAGAG
CCGTTAGTTCCAGCTTGATGCGTCGCAGTTGGAGACTCTGATAAATATTAGCATTTCAATGCTATTTCCGT-CCTTGTTG
AGGTGACGATCAAGAACTAGCAAAATGGCTAACTAATGCATAGGAAGGGAACTGCAAAAGCAAGATTCATATGTTGGGTA
CACCACTTTATCGTTTGTCGCTTTTTTGCTAGGATTGTTACAAAATTATTGTCTCTGAACTACATCAC------------
TGCATTGTTTTTGTTGCTTTTACAAGAAC-TCTCTTCATGGTAAAAGCCAAGCCATTTCATATCTGTTAACTGGTTTTCT
AGTCTAGAGCCGCATAGGCCCTTGATAAAGCGGAAGTTTAATACATAATCATGT--CATACGGGTCGTTATGGCCTAGCT
CTAACTCGATTATTTTATTTTAAATGTGCATAGACTAAGACAAAG-GTTATGACGAAATATAGTGGTCTCATGCGGTGAT
GCTTCTGACCATTACTTTATAGTAGCTTTAAATTGAAAAACAAACTAAGTGCCTCTTGCTCTAAATCATAACCATTACAT
GCTTTTAGTGGTGCAACCTAAGTGGGATGCAACTTGCTGCAGAACCGAATAGTGTAATAGAGTTGTTAGTAATGTAGCCC
CCCATCTCTTGCTACGTTCACTTTGTTC----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------CTTTGCCGAGCGGATTTACCGAGTTTTTTCTAGCTTGATCTTTA
AATTTCCCAAGAAAGATATAATAGAATTGTGCTAGCTATACAGTTACTGCAAATTATTGTCGGGGCTGGGTTTATTTATC
CCAGGTTGTCTAGAAACATCTGAACCAACATCATAGCATATGTGGTGATCAATTAGCATCATGTCTGAACAATCTCAGTT
TGTTCTTTTAATGTACTTTGTAGGGTTTCCATTTAAACAACATGATGATTCAGTAACTCAGTCACTTATGATAGTTTGTA
TGGAAACCAGCCAAAGTCAGCCAGGTTATCATAGGATTTGTAGCTTGCCAGCTAGTAAGATCTTGCCTGTACTGCTTGCC
ACTGGGAATCAACTAGAAAATGTATCTGGTATCCAGCAGGTAGCAGTTGCAAATGGTTTTGTGTAAGTTTCATACATAGT
GATGGTTATGTATGCTAGCACAGGATAGCAGAAATGCAGTTCAGTTGGATGCTATAGCGCAAGATTCATTGATCTTGAAG
CAATAGCCGTAAAAGTGAGAAAAAACGTTGCTGTTGAGAACTGGGTGGTAGCCCAGTGTTAAAAGCGCTGTAGTGTGTCC
ACATCGGTCTGGGTTCAACTCCCGGTGGGTGCGGAATTTTGCCGCTATGGTTAGACTTTGTGTGATCGGTTTCCTGTGCC
TCTCATTTCCTTAACC-----AAAAAAAGGAAAAACGCGGGCAGGGTTCCTCCGACGATGGTTGCTTTTTT--TTCTGTT
GAGAAAATGATGCTGCTGTATTGCATTGTTGTTCTATTTTTCAAGGTCCCAACGTTTGTTCCAAGCTTGGGGCACACATA
GATTGAATAAACCACTTAAGTTATCCATATGCCCAAGTCCACAGTCAAGATTTTAGATCACTGAAATGTATCTACGATGT
TTGCAGGACTAGCTGATGATGCATCTAAAGACGAGTCAAAAGGTCACACTGGCCAAACAGTTTTGTTTGTCCTGCTAGGA
ATTGGTGTAGCCGGTCTGTTGTCATTCTTCCTTTTCAAGTATTGGCAGAAGAAGAAAAGAGAGGAGCAACATGCACGGCT
GCTGAAGTTATTTGAAGAGGATGATGACATTGAGGTCGAGCTTGGCCTTAGAGATTGA----------------------
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------------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G262800
GCTGGAGCGCGACGCGGAGGAGGAGCGTCGCGATGCGGAGGAGGAGGAGGAGGAGCGCCTTGCCCGCGCTAGGCTAGCTC
AGCCGCCGGCGGTACAGCCCGCGGCAGATGACGTCGGTAGAGCCTGGTCGACGGTGTTCCCTTGTGCTGG-CCGACGCCG
ACGCTCATCGACCTCACCGGTCCCGACAACGACGACAAGGACGCCTAGGGCAGCACGCT---TCATAGTTTTAGTTTTAG
TTAATGTAAAAGTAAACCCGTGCACTCCTGCGGGCC---------GGCATTAATATTTAATTAACGTTTTTATTTTTCAA
AATGTTTGCGGCAATGTTTTTTTTTCGCGCGACCTAAAAAATGAGTCGGGCCAGCATTGGATGCAAGCGCCGAGCCGTGG
AGAGCGCCATGGTCATAAGTCATAAGTTGCTCCACCCCAACTTAACTTACAAATCATCCCTTTTTGCGTGGGTCTCACCA
CCTTTATATTAAAAAACAAGATGAGAAGGTATGGTGAGGTGACTTATACATCAGGGGATAATCAAAGAGGCCTGACTTAT
AAGTCACACCTGATTTATAAGTCAGGTGACTTTGGAACCAAACAGGCCCTTATGTTCGGTGCATGACTCTTTGGATGCCT
AGTATCGACGGCTCGACGTTCCCAAACTTTTTCTTTTC----TTTGAGATGGTACGTTCCCAAACTAAACACCCTTTCAT
TAC-----AACCCGTTGGTAGACGCCCACTGGGGGCCCACTGCCAGCGGCACGGAGACGCCGAGAACGACCGCCCAGCTG
TGC------GTGCA-CGGAGCCTTCGAGGGCAAGAACGAACAGCGCGTCCGGTCGACACCCACCCACCAGACGAATAA--
----AGCAAAAACACCGCA-CGAAGGCGGACGGCACCGAAGCCTCCG-----ACCTCCGATCCACCACCAACACGACACG
AGCTCTTGGCGGAGGAGGAGC---TGTCGGCAGCTTCGTCGTCGCGGTCGCCTCGTAGACGTAGGCGCGGGAAGAGAGGC
GGAGATGAGACGGCCGCTCGGCGCATGCGGCAGCAGATCCAGCCCGGCCGCTGCTTTCCTCCTGGCCGCCGCCGCGATCT
GCGCCCAGTTCGCCACAGGTGCGTGCCCCCTCCGGCCCCGCTCGATCTGCTCTAACCCACCGGGATCTGCGAGTGGTATT
GGAGATCTGGTTGAGGGGCGTTGCCTGGGATTGGCGAAGAGTCGCCGGCCCGCTGATTGGGGGATTCAGGATTCCATTAT
TATCGTCAAGTGCAGAAATTATTATTGTCTGCGAGTCTATTTAATTATGAAGATTTGGATTTGGGCCGAAGAGCTCGCTA
TATCCCCGTGGTAGTTTCACTGATTTTTCATGAATAAATTCACCAGTTTAACCGTAAGATCCCGATTCCAGTCCAATACT
TTTGGCCTTTCGCCTCAGGTGGATTGGGTTGCTGTATCGTTTCTCGTGGAAGTCGAAATAAGAAATTACTCCCATGGGAC
AAATAGGCGCATGCGCTAGCTCCT---------TATCGAGGTTAAAACTATTTTGGAAAAATGCGTGCCAAAAATTAGAG
CCGTTAGTTCCAGCTTGATGCGTCGCAGTTGGAGACTCTGATAAATATTAGCATTTCAATGCTATTTCCGT-CCTTGTTG
AGGTGACGATCAAGAACTAGCAAAATGGCTAACTAATGCATAGGAAGGGAACTGCAAAAGCAAGATTCATATGTTGGGTA
CACCACTTTATCGTTTGTCGCTTTTTTGCTAGGATTGTTACAAAATTATTGTCTCTGAACTACATCAC------------
TGCATTGTTTTTGTTGCTTTTACAAGAAC-TCTCTTCATGGTAAAAGCCAAGCCATTTCATATCTGTTAACTGGTTTTCT
AGTCTAGAGCCGCATAGGCCCTTGATAAAGCGGAAGTTTAATACATAATCATGT--CATACGGGTCGTTATGGCCTAGCT
CTAACTCGATTATTTTATTTTAAATGTGCATAGACTAAGACAAAG-GTTATGACGAAATATAGTGGTCTCATGCGGTGAT
GCTTCTGACCATTACTTTATAGTAGCTTTAAATTGAAAAACAAACTAAGTGCCTCTTGCTCTAAATCATAACCATTACAT
GCTTTTAGTGGTGCAACCTAAGTGGGATGCAACTTGCTGCAGAACCGAATAGTGTAATAGAGTTGTTAGTAATGTAGCCC
CCCATCTCTTGCTACGTTCACTTTGTTC----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------CTTTGCCGAGCGGATTTACCGAGTTTTTTCTAGCTTGATCTTTA
AATTTCCCAAGAAAGATATAATAGAATTGTGCTAGCTATACAGTTACTGCAAATTATTGTCGGGGCTGGGTTTATTTATC
CCAGGTTGTCTAGAAACATCTGAACCAACATCATAGCATATGTGGTGATCAATTAGCATCATGTCTGAACAATCTCAGTT
TGTTCTTTTAATGTACTTTGTAGGGTTTCCATTTAAACAACATGATGATTCAGTAACTCAGTCACTTATGATAGTTTGTA
TGGAAACCAGCCAAAGTCAGCCAGGTTATCATAGGATTTGTAGCTTGCCAGCTAGTAAGATCTTGCCTGTACTGCTTGCC
ACTGGGAATCAACTAGAAAATGTATCTGGTATCCAGCAGGTAGCAGTTGCAAATGGTTTTGTGTAAGTTTCATACATAGT
GATGGTTATGTATGCTAGCACAGGATAGCAGAAATGCAGTTCAGTTGGATGCTATAGCGCAAGATTCATTGATCTTGAAG
CAATAGCCGTAAAAGTGAGAAAAAACGTTGCTGTTGAGAACTGGGTGGTAGCCCAGTGTTAAAAGCGCTGTAGTGTGTCC
ACATCGGTCTGGGTTCAACTCCCGGTGGGTGCGGAATTTTGCCGCTATGGTTAGACTTTGTGTGATCGGTTTCCTGTGCC
TCTCATTTCCTTAACC-----AAAAAAAGGAAAAACGCGGGCAGGGTTCCTCCGACGATGGTTGCTTTTTT--TTCTGTT
GAGAAAATGATGCTGCTGTATTGCATTGTTGTTCTATTTTTCAAGGTCCCAACGTTTGTTCCAAGCTTGGGGCACACATA
GATTGAATAAACCACTTAAGTTATCCATATGCCCAAGTCCACAGTCAAGATTTTAGATCACTGAAATGTATCTACGATGT
TTGCAGGACTAGCTGATGATGCATCTAAAGACGAGTCAAAAGGTCACACTGGCCAAACAGTTTTGTTTGTCCTGCTAGGA
ATTGGTGTAGCCGGTCTGTTGTCATTCTTCCTTTTCAAGTATTGGCAGAAGAAGAAAAGAGAGGAGCAACATGCACGGCT
GCTGAAGTTATTTGAAGAGGATGATGACATTGAGGTCGAGCTTGGCCTTAGAGATTGATAATCTTCTCTGTACAGCAAAA
GTATCTTGGCTGACAAGGT-ATATCTATCACTACGGCAGCATATAT----------------------------------
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---------------------------------------------GATTGATGTAATGCTCTGTATATTGTAGTACTTCC
TTTGACACTTTGATTTCGTATCTACATGTGATTTTTTTTCATGTACTTAGTCCTGTGATGTTTCATTGCCTAATGTGCTC
ACATAAGTTTCCCTGTTCTTAATCTTAATTGTGGACTTCAGTTTTTTCATTAGTTTTAATTAGTTATTGGTTGAACAGTT
TTAGAC---------------------TGGCGAAAATCTAGTTGAAGATAAAAAGGCCAAAACAGGTGCTTGCCTAATGA
CGATATATGGTGTTTGGGCCTTGGGGTACCTATG---TACACAATCATTTTAGTAGTTTAGCTACACAAACTTCTTATGA
TGACTACACAAGACATTAGTTAAATATTGAAAAGTTAGACATTGCTCGTAGCCTCGTATTATCATATTATGCGCCAAAAG
TTTTGGCAGATGCAAATATTACATGTTCA-----------------------------AACTAAATAATTTTGTGATTCA
TTGACAACCTCTTTTGATTCCAAGCAACATTCCTTCTCGTGTACTTGCATGC----ATGCGACCAATAAAATCGATGAGG
ATATTTACGGTACCTGAAATAGTGGACACCTGCTTTTCTGTCATCCATCTAAAGGCATAATCGGTTTGATTATCCTAAAT
AATGGTACATGATGCCACACAATTTAGT-GAAAATGTGTGAACTTGTCTTGCGTTTGGATCAAACAAGCTTACACAACCA
ATATGTCTTGAATTTAGTAGCACCAAATCTGCAGCACGAGACATC-TTTTTTACTCTTTTTTAATACAAATTCTCTTTCT
TGACAGGTTTTGCTGGCAGATCATC-CATCACCTTTGTGTTAATGTAAAGAATTTGTTGTATTTAAACTCAGACAGCCTC
CCGAGGAAGGTCTACTGTACCTTAGTTTTATATATGGTGAATATCTTGACATTCACGATCCATGAAAATAGCTCTACA
>chr1B_95
CAGCCGACGGCGGAC-----------------------------------------------------------------
-----------------------------GACGTCGCTAGAGCCTGATCGACAGCGTTCCCTTGTGCTGGCCCGACGCCG
ACGCTCATCGACCTCACCAG-CCCGACGACGACGACAAGAACGCCCAGGGCAGCGCGCCTCCTCATAGTTTTAGTTTTAG
TTAATGTAAAAGTAAATTTGTGGACTCTCGCTGGCCTTTGTGACTGGCATTAATATCTAATTAACGTTTGTTTGTAGTA-
----------------TTTTTTTTTCGCGCGACCTCAACAATGTGTCGGGTCAGTATTGGACGCAAGCGCCAACCCAAAC
GCGAAAACGGACGTGTCCACCGGGCCTATCCAAACGGACGAAAACACTATCTATTTGGGTCGGCGCGTTGGAG-------
--------------------------------------------------------------------------------
-------------------------------------------------TTGCGTTTAGTGCAGGACTCCTGGATGGCTA
GTTAT------CTGGACGTTCGCAAACTTTTTTCCCTTTATATTAGAGATGATACGTTCCCAAACTAAACACACCCTTTT
CGTTACAAAACCCGTTGGTAGACGCCCACTGGGGGCCCACTGCCAGCGGCACGGAGACGCCGAGAACGACCGCCCAGCTG
TGC------GTGCAACGGAGCCTTCGAGGGCAAGAACGAACAGCGCGTCCGGTCGACACCCACCCACCAGACGAATAATA
ATAAAGCAAAAACACCGCACCGAAGGCGAACGGCACCGAAGCTCCCG-----ACCTCCGATCCACCACCAACACGACACG
AGCTCTTGGCGGAGGAGGAGAAGGTGTCGGCAGCTTCGTCGTCGCGGTCGCCAGGTAGACGCAGGCGCGGGGAGAGAGGC
GGAGATGAGACGGCCGCTCGGCGCATGCGGCAGCAGATCCAGCCCGGCCGCTGCTTTCCTCCTGGTCGCCGCCGCGATCT
GCGCCCAGTTCGCCACAGGTGCGTGCTCCCCCCGGCCCCGCTCGATCTGCTCTAATTCGCCGGGATCTGCGAGGGGTGTT
GGAGATCTAGTTGAGGGGCGTCGCCTGGGATTGTCCAAGAGTCGCCGGCCCGCTGATTGGGGGATTCGGGATTCCGTTAT
TATCGTCAAGTGCAGAAATTATTATTGTCTGCGAGCCTATTTAATTACGAAGATTTGTATTTAGGCCGAAGAGCTCGCGA
TATCCCCGTGGTAGTTTCACCG-TTTTTCATGAATAAATTCACCAGTTTAACCGTAAGATCCCGATTTCAGTCCAATACT
TTTGGCCTTTCGCCTCAGGTGGATTGGATTGCTGTAGCGTTTCTCGTGGAAGTCGAAATAAGAAATTACTCCCATGGGAC
AAATAGGCGCATGCGCTAGCTCCT---------TATCGAGGTTAAAACTATTTTGGAAAAATGCGTGCCAAAAATTAGAG
CTGTTAGTTCCAGCTTGATGGGTCGCACTTGGAGACTCTGATAAATATTAGCATTTCTCTGCTATTTCCGTCCCTTGTTG
AGGTGACGATCAAGAACTAGCAAAATGGCTAACTAATGCATAGGAAGGGAACTGCAAAAGCAAGATTCATATGTTGGGTA
CACCACTTTATTATTTGTCGCA-TTTTGCTAGGACTGTTACAAAATTATTGTCTCTGAACTACATCAC------------
TGCATTGTTTTTATTGCGTTTACAAAAAC-TCTCTTCATGGTAAAAGCCAAGCCATTTCATATCTGTTAACTGGTTTTCT
AGTCTAGAGCCGCATAGGCCGTTGATAATGCGGAAGTTTAATACAGAATCATGT--C---------GTTATGGCCTAGCT
CTAACTCGATTATTTTATTTTAAATGTGCACAGACTAAGGCAAAG-GTTATGACGAAATATAGTGGTCTCATGCGGTGAT
GCTTCTGACCATTACTTTATAGTAGCTTCAAATTGAAAAA-AAACTAAGTGCCTCTTGCTCTAAATCATAACCATCGCAT
-------------------------------------------------------------------------GTAGCCC
CCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGCCGAGCGGATTTAT---GTTTTTTCTAGCTTGCTCTTTA
AATTTCCCAAGAAAGATAAAATAGAATTGTGCTAGCTATAGAGTTACTGCAAATTATTGTCGGGGCTGGGTTTATTTATC
CCAGGTTGTCTAGAAACATCTGAACCAACATCATAGCATATGTCGTGATCAATTAGCATCATGTCTGAACAATCTCAGTT
TGTTCTTTTAATGTGCTTTGTAGGGTTTCCATTTAAACAACACGATGATTCAGTAACTCAGTCACTTACGATAGTTTGTA
TGGAAACCAGCCAAAGTCAGCCAGGTTATCATAGGATTTGTAGCTTGCCAGCTAGTAAGATCTTGCCTGTATTGCTTGCC
ACTGGGAATCAACTAGAAAATGTATCTGGTATCCAGCAGGTAGCAGTTGCAAATGGTTTTGTGTAAGTTTCATACATAGT
GATGGTTATGTATGCTAGCACAGGATAGCAGAAATGAAGTTCAGTTGGATGCTATAGCGCAAGACTCATTGATCTTGAAA
CAATAGCCGTAAAAGTGAG--AAAACGTTGCTGTTGAGAACTGGGTGGTAGCCCAGTGTTGGAAGCGCTGTAGTCTGTCC
ACATCGGTCTGGGTTCAACTCCCGGTGGGTGCGGAATTTTGCCGCTATGGTTAGATTTTGTGGGATCGGTTTCCTGTGCC
TCTCATTTCCTTCTTAACCAAAAAAAAAAGAAAAATGTGGCCAGGGTTCCTCCGACGATGGTTGC-TTTTT--TTCTGTT
GCGAAAATGATGCTGCTGTATTGCATTGTTGTTCTATTTTTCAAGGTCCTAACGTTTGTTCAAAGCTTGGGGCACACATA
GATTGAATAAACCACTTAAGTTATCCATATGCCCCAGTCCACAGTCAAGATTTTAGATCACTGAAATGTATCTACGATGT
TTGCAGGACTAGCTGATGATGCATCTAAAGACGAGTCAAAAGGTCACACTGGCCAAACAGTTTTGTTTGTCCTGCTAGGA
ATTGGTGCAGCCGGTCTGTTGTCATTCTTCCTTTTCAAGTATTGGCAGAAGAAGAAAAGAGAGGAACAACATGCACGGCT
GCTGAAGTTATTTGAAGAGGATGATGACATTGAGGTCGAGCTTGGTCTTAGAGATTGATAATCTTCTCTGTACAGCAAAA
GTATCTTGGCTGACAAGGTAATATCTATCACTACGGCAGCATATACTCCCTCCTTCCATCTATATAGGGCCTAATGCGTT
TTTCGAGGCTAACTTTGACCAAATATTAGAGCAATAATATATGACATGCAACTTACACAAAGCACATCGTTAAATTCGTG
TGTGAAAGGAACTTTCAATGATATAATTTTCACATTGTGCATGTCATGTACTACTAATCTTGTCAATAGTCAAAGGCGGT
CTTAAAAAATGCATTAGGCCCTATATAGATGGAAGGAGGGAGTAGGATTGATGTAATGCTCTGTATATTGTAGTACTTCC
TTTGACACTTTGATTTCGTATCTACATGTGATTTTTTTTCATGTACTTAGTCCTGTGATGTTCCATTGCCTAATGTGCTC
ACATAAGTTTCCGTGTTCTTAATCTTAATTCTGGACTTCCGTTTTTTCATTTATTTTAATTAGTTATTGGTTGAACAGTT
TTAGACTGGCAAAAATCTAGTTTAGACTGGCAAAAATCTAGTTGAAGAT-AAAAGGCCAAAACAGGTGCTTGCCTAATGA
TGATATATGGTGTTTGGGCCTTGGGGTACCTATGATGTACACAATCATTTTAGTAGTTTAGCTACACAAACTTCTTATGC
TGACTATACAAGACATTAGTTAAATATTGAAAAGTTAGACATTGCTCGTAGCCTCGTATTATCATATTACTCGCCAAAAC
TTTTGGCAGATGCAAATATTACATGTTCAAACTAAATAATTTTGTACTCGCAAAAAAGAACTAAATAATTTTGTGATTCA
TTGACAACCTCCTTTGATTCCAAGCAACATTCCTTCTCGTGTACTTGCATGCACGCATGTGACCAATAAAATCGATGAGG
ATATTTACTGTACCTGAAATAGTGGACACCTGCTTTTCTGTCATCCATCTAAAGGCATAACCGGTTTGATTATCCTAAAT
AATGGTACATGATGCCACACAATTTAGTC-AAAATGTGTGAACTTGTCTTGCGTTTGGATCAAACAAGCTTTTACAACCA
ATATGTCTTGAATTTAGTAACACCAAATCTGCAGCATGAGACATC-TTTTTTACTCTTTTTTAATACAAATTCTCTTTCT
CGACAGGTTTTGCTGGCATATCATCACATCACCTTTGTGTTAATGTAAAGAATTTGTTGTATTTAAACTCAGACAGCCTC
CCGAGGAAGGTTTACTGTACTTTAGTTTTATATATGGTGAATATCTTGACATTCACGATCCATGAAAATAGCTCTACA
>chr1A_661
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---------------------------------TTTTC----TTTGAGAAGATACGTTCCCAAACTAAACACCCTTTCAT
TAC-----AACCCGCTGGCAGACCCCCACTGGGGGCCCACTGGCAGCGGCACGGAGACGCCGAGAACGACCGCCCAGCTG
TGCCTGTGCGTGCAACGGAGCCTTCGAGGGCAAGAACGAACAGCGCGTCCGGTCGACACCCACCCACCAGACAAATAATA
ATAAAGCAAAAACACCGGACCGAAGGCGAACGGCACCCAAGCCTCCGACCTCACCTCCGATCCACCACCAACACGGCTCG
AGCTCTTGGCGG---AGGAGGAGGTGTCGGCAGCTTCGTCGTCGCGGTCGCCAGGCAGACGCAGGCGCGGGAAGAGAGGC
GGAGATGAGACGGCCGCTCGGCGCATGCGGCAGCAGATCCAGCCCGGCCGCTGCTTTCCTCCTGGCCGCCGCCGCGATCT
GCGCCCAGTTCGCCACAGGTGCGTGCTCCCTCCGGCCCCGCTCGATCTGCTCTAGCCCGCCGGGATCTGCGAGGGGTGTT
GGAGATCTGGCTGAGGGGCGTCGCTTGGGATCGGCGAAGAGTCGCCGGCCCGCTGATTGGGGGATTCGGGATTCCGTTAT
TATCGTCAAGTGCAGAA-TTATTATGGTTTGCGAGTCTATTTAATTATGAAGATTTGTATTTAGGCCGAAGAGCTCGCGA
TATCCCCGTGGCAGTTTCACTTA-TTTTCATGAATAAATTCACCAGTTTAACCGTAGGATCCTGATTTCAGTCCAATACT
TTTGGCCTTTCGCCTCAGGTCGATTGGATTGCTGTAGCGTTTCTCTTGGAAGTCGAAATAAGAAATTA----CATGGGAC
AAATAGGTGCATGCGCTAGAGTCAGCTCCTTGCTATCGATGTCGAAACTATTTGCGGAAAACGCGTGCCGAAAATTAGAG
CTGTTAGTTCCAGATTGATGCATCACACTTGGAGCCTCTGATAAATATTAGCATTTCTCTGCTATTTCCGCCCCTTATCG
AGGTGACGATCAAGAACTAGCAAAATGGCTAACTACTGCATAGAAAGGAAACTGCAAAAGCAAGATTCATATGTTGGGCA
CACCACTTTATTATTTGTCGCG-TTTTGCTAGGACTGTTACAGAATTATTGTCTCTGAACCACATCACTGGCTTTAGTAT
TGCATTGTTTTTATTGCTTTTACAATCATTTCTCTTCATGATAAAAGCCAAGCCATTTCATATCTATTAACT-GTTTTTT
AGTCTAGAGCAGCATAG-CCCTTGATAAAGAGGAAGTTTAATATAGAACCATGTGTCATATGGGTGGTTATGGCC-AGCT
CCGACTCAATTATTTTACTTTAG-TGTGCCCAAATTATGGTAAAGCGTTGTGCCAAAATGTAGCGGTCTCATGCGGTCAT
ACTTCTGACCATTACTTTATAGTAGCTTCAAATTGGAAAGAAAAACTAACT--TCTTGCTCTAAATCATAACCATTGCAT
ACTTTTGGTGATGCAGCCTAAGTAGGATGCAACTTGCTGCAGAACCGAATAGTGTAATAGAGTTGTTAGTAATGTAGCCC
CCCATCTCTTGCTACGTTCACTTTGTTC----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------CTTTGCTGAGCGGATTTACCGAGTTTTTTCTAGCTTGATCTTTA
AATTTCCCAAGAAAGATAAAATAGAATTGTGCTAGCTATACAGTTACTGCAAATTATTGTCGGGGCTGGGTTTATTTATC
CCAGGTTGTCTAGAAACATCTGAACCAACATCATAGCATAAGTCGTGATCAATTAGCATCATGTCTGAACAATCTCAGTT
TGTTCTTTTAATGTACTTTGTAGGGTTTCCATTTAAACAACACGATGATTCAGTAACTCAGTCACTTATGATAGTTTGTA
TGGAAATCAGCCAAAGTCAGCCAGGTTATCATAGGATTTGTAGCTTGCCAGCTAGTAAGATCTTGCCTGTACTGCTTGCC
ACTGGGAATCAACTAGAAAATGTATCTGGTATCCAGCAGGTAGCAGTTGCAAATGGTTTTGTGCAAGTTTCATACATAGT
GATGGTTATGTATGCTAGCACAGGATAGCAGAAATGCAGTTCAGTTGGATGCTATAGCGCAAGATTCATTGATCTTGAAG
CAATAGCCGTAAAAGTGAG--AAAACGTTGCTGTTGAGAACTGGGTGGTAGCCCAGTGTTGGAAGCGCTGTAGTGTGTCC
ACATCGGTCTGGGTTTAACTCCCGGTGGGTGCGGAATTTTGCCGCTATGGTTAGATTTTGTGTGATCTGTTTCCTGTGCC
TCTCATTTCCTTCTTAACCAAAAAAAAGA-AAAAACGTGGGCAGGGTTCCTCCGATGATGGTTGC-TTTTTTTTTCTGTT
GAGAAAATGATGCTGCTGTATTGCATTGTTGTTCTA-TTTTCAAGGTCCTAACGTTTGTTCCAAGCTTGGGGCACACATA
GATTGAATAAACCACTTAAGTTATCCATATGCCCAAGTACACACTCAAGATTTTAGATCACTGAAATGTATCTACGATGT
TTGCAGGACTAGCTGATGATGCATCTAAAGATGAGTCAAAAGGTCACACTGGCCAAACAGTTTTGTTTGTCCTGCTAGGA
ATTGGTGCAGCCGGTCTGTTGTCATTCTTCCTTTTCAAGTATTGGCAGAAGAAGAAAAGAGAGGAGCAACATGCACGGCT
GCTGAAGTTATTTGAAGAGGATGATGACATTGAGGTCGAGCTTGGCCTTAGAGATTGATAATCTTCTCTGTACAGCAAAA
GTATCTTGGCTGACAAGGT-ATATCTATCACTACGGCAGCATATAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GATTGATGTAACGCTCTGTATATTGTAGTACTTCC
TTTGACACTTTGATTTCGTATCTACATGTG--TTTTTTTCATGTACTTAGTCCTGTGATGTTTCATTGCCTAATGTGCTC
ACATAAGTTTCCCTGATCTTAATCTTAATGCTGGACTTCAGTTTTTTCGTTAGTTTTAATTAGTTATTGGTTGAACAGTT
TTAGACCA---------------------GCAAAAATCTAGTTGAAGATAAAAAGGCCAAAACAGGTGCTTGCCTAATGA
CGATATATGGTGTTTGGGCCTTGGGGTACCTATG---TACACAATCATTTTAGTAGTTTAACTACACAAAGTTCTTATGA
TGACTATACAAGACATTAGTTAAATATTGAAAAGTTAGACATTGCTTGTAGCCTCGTATTATCATATTACGCGCCAAAAG
TTTTGGCAGATGCAAATATTACATGTTCAAACC-----------------------------AAATAATTTTGTGATTCA
TTGACAACCTCTTTTGATTCCAAGCAACATTCCTTCTCGTGTACTTGCATGC----ATGCGACCAATAAAATCAATGAGG
ATATTTACGGTACATGATGCCACACAATT-----------------ATGTAAAGGCATAACCAGTTTGATTATCCTAAAT
AATGGTACATGATGCCACACAATTTAGTGGAAAATGTGTGAACTTGTCTTGCGTTTGAATCTAAACAGCTTACATAACCA
ATATGTCTTGAATTTAGTAACAGAAAATCTGCAGCACAAGACATCTTTTTTTACTCTTTTTTAATACAAATTCTCGTTCT
TGACAGGTTTTGCTGGCAGATCATCACATCATCTTTGTGTTAATGTAAAGAATTTGTTGTATTTAAACTCAGACAGCCTA
CCGAGGAAGGTCTGCTGTACTTTAGTTTTATATATGGTGAATATCTTGACATTCACGATCCATGAAAATAGCTCTACA
>SNPs
SSSSSSS--SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---------S-----S-S-------------------------
------------------S-S------S-----------S-----S--------S---S---------------------
----------------SSS---S----SS--S------------------------S------------S-S-S-SSS-S
SSSSSSSSSSSSSSSS-------------------S--S----S------S---S------S---------S-S--SSSS
SSSSSSS-SSSSSSS-SSSS-SSSSS-SS-SSS--SSSSSSSS-SSS--SSS--SSSSSSSSSSSSSS---SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SS---SS-----S-----S-S-SSS--SS
SS---SSSSSS--S-------S----------S------------------S----------------------------
--------------------------------------------------------------------------------
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----------------------------S---------------------------------------------------
--------------------S-------------------------------SS-------S------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------------S--------------S---S--
---------------------S---------------------------------------------S-------S----
---------------------------------------------------------S----S---------------S-
-------------------------------------------------------------------S------------
---------------------------S--------S-------------------------------------------
--------------------------------------------------------------------------------
-S-------------------------S-----------------------------SS---------------------
--------------------------------------------------------------------------------
-----------SS--------SS-----------S---------------------------------------------
------------S------------S------------------------------------------------------
---------------------------------------------S--------------S----S--------------
------------------------------S--------S----------------------------------------
----------------------------S-----------S-----------------------------------S---
S-----S---S----S-------S--------------------------------------------------------
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------------------S-------------------------------------------------------------
-------------------------------------------S------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
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-------------------SS---------------------------------------SS------------------
-------------------------------------------------------S------------------------
------------SSSS------------S--------S---------------------------S--------------
-------------------------------------------------S------------------------------
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-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------S-------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------------------------------------------------
>forward_475
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-------------------------------------------------------ATCCCTTTTTGCGTGGGTCT-----
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>reverse_2167
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------AGTGGTGCAACCTAAGTGGG------------------------------------------------------
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>forward_478
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----------------------------------------------------------CCTTTTTGCGTGGGTCTCAC--
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>reverse_2176
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---------------ACCTAAGTGGGATGCAACTTG--------------------------------------------
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>forward_609
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-----------------------------CTTTGGAACCAAACAGGCCC-------------------------------
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>reverse_2764
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-------------------------------------------GGTGATCAATTAGCATCATGTCTGA------------
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>forward_635
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-------------------------------------------------------TCGGTGCATGACTCTTTGGA-----
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>reverse_2843
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------------------------------------------TGATGATTCAGTAACTCAGTCACT--------------
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>forward_1179
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---------------------------------------GCTCGATCTGCTCTAACCCA---------------------
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>reverse_3182
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-------------------------------------------------------------AAAGCGCTGTAGTGTGTCC
A-------------------------------------------------------------------------------
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>forward_1602
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-------------------------------------------------------------TGCGTGCCAAAAATTAGAG
CC------------------------------------------------------------------------------
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>reverse_3608
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-------TAGCCGGTCTGTTGTCATTCT----------------------------------------------------
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>forward_3346
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----------------------------------------------TTCCTCCGACGATGGTTGCT--------------
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>reverse_4820
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-------------------GCACCAAATCTGCAGCACG------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
