>input_sequence_34140
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------ATGGATCGCTACCAGCGAGTCGAGAAGCCGCGGGAGG
AGGCGCCCATCGGCGCCAACGAGATCCGCATCACGGCGCAGGGCCGCACCCGAAACTACATCACCTACGCCCTCGCCCTG
CTCCAGGTAAGCGCCGCCTTGCGTGCCTGTCCACGTCCGCTCGGCGCCGTCGGTTCCAGGGAGCG---GGGAGATCGTTT
TTCCTTTCTTTGCTTGGCGATTTTTGGTTAGGGTTTAGCACGGGTTCAGTCCCGATGTTGGTTAGGTGATTAGGGCATCT
AATCGCGAAGGTTTGCTGTTCGAATGGCTCTTGCGGTTCGTTATCGTGCTGTTGGCGTTGGTTTGACTAGTATTCGCAAT
GATTATT----------------GAAGGGACCGCTTTCCGTACGATGCTTTGTTTATTGTTTTTGTT-----ATATCTAG
GGTTTGTGTTTGGTATGCAACTTTTGTGAATCTACTGATTAACTATACTATTT---ACTCGATTCGAGTTTACAGTTGGG
CATTGGGATGCTATTAATTTTATTAATGTATCATCATTGCTAGTATTACTGTTTTTTATGTGTGTGGATCTATGCTATGC
CAGTAAGATTCAATAGTCATTAGGTTGTCTTGTGGTTGAGTGGATGAGTGCCTTCCTTCGCTTGAATTTGTGCCCACTGC
TGTTTTATAAATTTTAGAACGATAATCTTGGGCATATCTATTTCTTT--TTATTAATAAGTACCTAAAGTATCTTTAACT
TTCTGTCCATAACAGGAAGAAGCCACAGATGAAATTGTTATAAAGGCTATGGGAAGGGCTATCAACAAGACAGTGGCCAT
TGTGGAGCTTCTCAAGGTAGACCTGATTCAGATTGCTAGTAAATACTTACTACACCTTGCAGTTAAACCAAGTTAACATT
TTCAAGCCATGTCTAAGCAGAGAAGGATTGCTGGTCTCCATCAGAATAACTCCATCGAATCAATCAATATAACTGACACT
TGGGAGCCGTTGGAAGAAGGCCTGAATGTGTAAGAAGCACTGGATTTATTTGCATAGTGTAAGTACTT-CCAGCTTTTGA
TGTACAGTGTGTTTCTGACAGAATTCTTGTATGACTTCTTGGCAGACTTGAGACTACTCGCCATGTTTCCTTGATTACCA
TTACCTTGTCAAAGAAAGAGCTGGATACATCGTCTCCTGGGTTAGTAGCATCATCGTTTTCCT---TTTTTGTATGTCTG
ATCAATACTTGGTGGGGAGTTGTAACCTGCATATAGTTTCTCACATGCCATGGAATTTATTTCTGCGATGGTTTGTTATA
TCATGACATGGCTCTGCCTCTGTTTTTGTTATGTTTTCTCATTTGGCAAGCGCATGCTCACTTGTATATAAGGACTGGAG
AGAGTTTGCAATCGCTTATAACTTCAAATATTTATGTAGGAATTTTTTGCC-TGG-CACGCCTTTTGCCTAGTTTAGAAA
CAATCCTGGTTTTGTCTGTTAAATAGGGCTATGCACAATTTTACTTTGGGGATTCATCTCTTTGACAGATTTGTAATACG
GCTTTGAATTCTGCAGTTACCAGCTACCGATACCAGTTGATCAGGTCAGGCCACCAACAGAATTTGATCAGGATGCAGAG
GATGTGCCAAGTGGCCGTGGAAGAGGCCGTGGTCGCCGGGGAAGGGGCAGGGGAAGAGGTA-AATATCTGCCTGTTTACA
CTGTATATTGTAAGTTAAGTTAACTATGGGTTTTGCTCATGTTGTTTTATTCCTAATTGTTCTTTACATTTGGGCCATTG
TGATATA--GGAGGGTTCAGTGATGGAGGGGCAGATTATGATGATGAGAATGGAGACATGGAAGGTCCACAGGGATATCG
TGGCAGAGGGAGAGGAAGGGGTAGGCGTGGGTCCTTTGGGCCTGGAAGGGGTTATGGTGGTGATGGCTATGGCTATGTAA
ATGAAGAAGCTGGTGGGTATCATGGCATGGAGCATAATGGACCTCCTGTGCAAGGATATGGTTAGTTCTGTTTAAATTTT
CTACTAACAGCCCTCAGTTTTTAATCTTGCCCCCAGTTTTTATCACTTC-------------------------------
--------------------------------------------------------------------------------
--------ACCACTTAATTAGAGATGTGCAGAACCACAGATAATATTTAAATTCTCAATGTGATG----TATTGTGCTTT
GACTAAGGTAGAAAGAAGTGATGATATTATAAATTGGCATTCCTTTGAATAATTCTTTTCTAGTTGCC-------TCTCT
GAATTTGGGTTTAATCACCACTAAGCAATGTTATCTTGTGAATCTCCTGTGCAGAAGGTGATGGAGGAAGTGGCCGTGGC
CGTGGC------CGCGGACGCGGACGCGGACGCGGTGGGGGTCGTGGCCGTGGACCATTCCCCCAAGGACCTCCTCAAGA
GTAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr2A_1_TraesCS2A01G302000
CCTTAGTCCGAGAACCTAGGATTACAAATCCTAGCCGGCTTTGTTAGTGGACACAGAGTCCTTCACAATTCTGCTATCTT
TGTCTTGTACGACTAGTCATCCATGGGTCTTCCTGAATGCATCACGGGCCGACCAATGTGGCGCAGGACGGAACAGAACA
AAGGGCCTCACCTCGACCCACCGGACCTCACGCGGTGACACACCCTCTGCCCCCACGTCTCATTATCTTCTCAGTTATTT
TAGAGAACTGAGAAACGTTTTGAACTGCTCTAAATCTATAATGTATATTGAAATAAAACTTTTTC--AAAAAGAAAGAAA
TAGTACTTGCTACCCACAAGATGTTGGATGAGCCCACAGATCACACGAAATTATCAAGATTCATAATATGAAATCAATAT
TGTTAGATGCATCATGAAATTAATTTTCATACCATATAGCTTTAATATTGTAGATGTTGATATTTTTT-TATAAAGTTGG
TCAAACTTTATAATATTTGATTTTGATCAAATCTTATCATATGCATATAAAAAAATGGAGGGAGTACTCGCTGCCCACAG
GATCTTGGATGAGCCCACAGATCACACGAACAAACACGCGTCCATACTGACCCGACAGGGACAAATCCTTCTCTCTGACC
ACCATCGCCACCACCCGATCACAGAACCGACGGCCCAGATCCCCAGGACGCGGGCGCGGGCCAGACCATGGAGCCGAACA
CCCAACGCAGCACGCCGACCGAACGTGCCGGGCCCGGACACCAAAACCGGGTCCCTGTCGGACCAGGCCACCCCACGCGA
ACAAACCCTACCCTATCCGTCTCCGCTTGCTTCTCCTCCTCCCTCTCCCCTCCGCTCCTATATCAGCCACCGCGACGACC
CCCTCGAGAGACCACCGCGACTATCTCCACCGACCGCAAACCACCACAGAGCGCCCGTCGTATTCCGAGCGAGAGGATTC
GCGTCTGCGCGTCGGCGAAGGAGGTCGAGGAGGAGCAACGACCATGGATCGCTACCAGCGAGTCGAGAAGCCGCGGGAGG
AGGCGCCCATCGGCGCCAACGAGATCCGCATCACGGCGCAGGGCCGCACCCGAAACTACATCACCTACGCCCTCGCCCTG
CTCCAGGTAAGCGCCGCCTTGCGTGCCTGTCCACGTCCGCTCGGCGCCGTCGGTTCCAGGGAGCG---GGGAGATCGTTT
TTCCTTTCTTTGCTTGGCGATTTTTGGTTAGGGTTTAGCACGGGTTCAGTCCCGATGTTGGTTAGGTGATTAGGGCATCT
AATCGCGAAGGTTTGCTGTTCGAATGGCTCTTGCGGTTCGTTATCGTGCTGTTGGCGTTGGTTTGACTAGTATTCGCAAT
GATTATT----------------GAAGGGACCGCTTTCCGTACGATGCTTTGTTTATTGTTTTTGTT-----ATATCTAG
GGTTTGTGTTTGGTATGCAACTTTTGTGAATCTACTGATTAACTATACTATTT---ACTCGATTCGAGTTTACAGTTGGG
CATTGGGATGCTATTAATTTTATTAATGTATCATCATTGCTAGTATTACTGTTTTTTATGTGTGTGGATCTATGCTATGC
CAGTAAGATTCAATAGTCATTAGGTTGTCTTGTGGTTGAGTGGATGAGTGCCTTCCTTCGCTTGAATTTGTGCCCACTGC
TGTTTTATAAATTTTAGAACGATAATCTTGGGCATATCTATTTCTTT--TTATTAATAAGTACCTAAAGTATCTTTAACT
TTCTGTCCATAACAGGAAGAAGCCACAGATGAAATTGTTATAAAGGCTATGGGAAGGGCTATCAACAAGACAGTGGCCAT
TGTGGAGCTTCTCAAGGTAGACCTGATTCAGATTGCTAGTAAATACTTACTACACCTTGCAGTTAAACCAAGTTAACATT
TTCAAGCCATGTCTAAGCAGAGAAGGATTGCTGGTCTCCATCAGAATAACTCCATCGAATCAATCAATATAACTGACACT
TGGGAGCCGTTGGAAGAAGGCCTGAATGTGTAAGAAGCACTGGATTTATTTGCATAGTGTAAGTACTT-CCAGCTTTTGA
TGTACAGTGTGTTTCTGACAGAATTCTTGTATGACTTCTTGGCAGACTTGAGACTACTCGCCATGTTTCCTTGATTACCA
TTACCTTGTCAAAGAAAGAGCTGGATACATCGTCTCCTGGGTTAGTAGCATCATCGTTTTCCT---TTTTTGTATGTCTG
ATCAATACTTGGTGGGGAGTTGTAACCTGCATATAGTTTCTCACATGCCATGGAATTTATTTCTGCGATGGTTTGTTATA
TCATGACATGGCTCTGCCTCTGTTTTTGTTATGTTTTCTCATTTGGCAAGCGCATGCTCACTTGTATATAAGGACTGGAG
AGAGTTTGCAATCGCTTATAACTTCAAATATTTATGTAGGAATTTTTTGCC-TGG-CACGCCTTTTGCCTAGTTTAGAAA
CAATCCTGGTTTTGTCTGTTAAATAGGGCTATGCACAATTTTACTTTGGGGATTCATCTCTTTGACAGATTTGTAATACG
GCTTTGAATTCTGCAGTTACCAGCTACCGATACCAGTTGATCAGGTCAGGCCACCAACAGAATTTGATCAGGATGCAGAG
GATGTGCCAAGTGGCCGTGGAAGAGGCCGTGGTCGCCGGGGAAGGGGCAGGGGAAGAGGTA-AATATCTGCCTGTTTACA
CTGTATATTGTAAGTTAAGTTAACTATGGGTTTTGCTCATGTTGTTTTATTCCTAATTGTTCTTTACATTTGGGCCATTG
TGATATA--GGAGGGTTCAGTGATGGAGGGGCAGATTATGATGATGAGAATGGAGACATGGAAGGTCCACAGGGATATCG
TGGCAGAGGGAGAGGAAGGGGTAGGCGTGGGTCCTTTGGGCCTGGAAGGGGTTATGGTGGTGATGGCTATGGCTATGTAA
ATGAAGAAGCTGGTGGGTATCATGGCATGGAGCATAATGGACCTCCTGTGCAAGGATATGGTTAGTTCTGTTTAAATTTT
CTACTAACAGCCCTCAGTTTTTAATCTTGCCCCCAGTTTTTATCACTTC-------------------------------
--------------------------------------------------------------------------------
--------ACCACTTAATTAGAGATGTGCAGAACCACAGATAATATTTAAATTCTCAATGTGATG----TATTGTGCTTT
GACTAAGGTAGAAAGAAGTGATGATATTATAAATTGGCATTCCTTTGAATAATTCTTTTCTAGTTGCC-------TCTCT
GAATTTGGGTTTAATCACCACTAAGCAATGTTATCTTGTGAATCTCCTGTGCAGAAGGTGATGGAGGAAGTGGCCGTGGC
CGTGGC------CGCGGACGCGGACGCGGACGCGGTGGGGGTCGTGGCCGTGGACCATTCCCCCAAGGACCTCCTCAAGA
GTAGATTGGCTGGCCCATCGACTGAATGCGACGAGTCTCATCTTTGCTAGTAGATTATAATGGCTGTTGTATC------T
GGTTAGGTTTATGTTTAAAGTTGATAGAGTGACTCTCAGTGTGGGGGGATGAGACTAGTTATGATTTTGTAGCTAGGTTA
ATTCTTCCATTTGCTTTCATATACCAGACCTGGTTATCATTCCAACTGTGAATTGTAGCATCCTGAACGTGTTCATCATC
AAATCTAGCTCAGAAAATTTGTTTATGAT--TGTTGATGACCATCGTTTTATTTGTTTCTGATTCTGATTTTGATCCGAG
CATGGCAGCTGGAATCAGTTTGCTCGGTGTGCTGACGATT-------------TGGCAAGGCTTGTTAAGGATTTGTGGG
CTTGGGTACACATGAAAAACATATAAATTACTCCTGCCTTTTTTTTTGCGAAATACGGTTTGCTCTGCCTACGATCTCCT
CTTTGGGAATTCAAAGGAATGTTTGCAGCCTATTTTTTTTACCCGGCCTCTGCGTCAAGGGCACATAGCCATCTTTATTG
CATTATTATTCAAGACTTTACAAAAACAAATAAAATATACATACATACAAGGTTGATGATGTGCACTGTCCCCGCACCAT
GCACAATAAGAATAGCCATCTTTATTGCATATTCAAGACTTTACAAAAACAAATAAAATATACATACCTACAAGGTTGAT
GATGTGCACTGTCCCCACGCCACACACAACAAGAAATCCGGTGGCTGCACGCCGGCTAGCCGCGAGCACCAACCAGCCAT
GGATCTAGAAGCATGCGAGACCAATGCCCGGCCATGGATCTAGGATTTGTAACGACCTCACCGCCGTTTGATCCAAGAGG
CCCAGATCTAGGATTTCCCAAGAGGGGGAGGGGGAGGTACAAGATCCAGGAGGCCTGGATCTAGGATTTGTAACGACCTT
ACCGTCGACTGATATGTGAATCTCCACCCCGAGCTCCAACCGCATTGAGGACCGAGACCTAGATA
>chr2D_235
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TTATTT
TAGAGAACTGAGAAACGTTTTGAATTGCTCTAACTCTACAATGTATATTGAAATAAAACTTTTTCAGAAAAAGAAAGAAA
CAACACTTGCTACCCACGAGATGTTGGATGAGCCCACAGATCACACGAAATTATCAAGATTCACAATATGAAATCAATAT
TGTTAGATGAATTATAAAATTAATTTCCATACCATATAGTTTTAGTATTGTAGATATTGATATGTTTTCTATAAAGTTGG
TCAAACTTTATAAAGTTTGACTTTGACCAAGTTTTACATGCCTACTCAAAAGAAACTCTCT------TCACTATCCATAA
GATGTTGGATGAGCCCACAGATCACACGAACAAACACGCGTCCATACTGACCAGACATGGACAAATCCCTCTCTCTGACC
ACCATCGCCACT----GATCACAGAACCGACGGCCCAGACCAAGC--------------------------AGCCGAACA
CCCAACGCAGCACGCCGACCGAACGTGCCGGGCCCGTACACCCAAACCGGGTCCCTGTCGGACCAGTCCACCCCATGCGA
ACAAACCCTACCCTATCCGTCTCCGCTTGCTTCTCCTCCTCCCTCTCCCCTCCGCTCCTATATCAGCCACCGCGACGACC
CCCTCGAGAGGCCACCGCGACTATCTCCACCGCCCGCAA---ACCACAGAGCACCCGTCGTAGTCCGAGCGAGAGGATTC
GCGTCTGCGCGTCGGCGAAGAAGGTCGAGGAGGAGCAGCGCCCATGGATCGCTACCAGAGGGTCGAGAAGCCGCGGGAGG
AGGCGCCCATCGGCGCCAACGAGATCCGCATCACGGCGCAGGGCCGCACCCGCAACTACATCACCTACGCCCTCGCCCTG
CTCCAGGTAAGCGCCGCCTTG----CCTGTCCACATCCGCTCGGTGCCGTCAGTTCCAGGGACCG---GGGAGATCGTTT
GTCCTTTTTTTGCCTGGCGATTTTTGGTTAGGGTTTAGTACGGGTTCAGTCCCGATGTTGGTTAGGTGATTAGGGCATCC
AATCGCAAAGGTTTACTGTTCGAATGGCTCTTGCTGTTCGTTATGGTCCTATAGGCGTTGGTTTGACTAGTAGTATTCGC
TATCATATTGTGTACTATTTGGGGAAGGGACCGCTTTCCGTACGATGCTTTGTTTATTGTTATTGTTGGTTGATATCTAG
GGTTTATGTTTGGTATGCAACTTTTATGAATCTACTGATTAGCTATACTACTT---ACTCGATTCGAGTTTACAATTGGG
CATTGGGATGCTATTAATTTTATTAATGTATCATCATTGCTAGTATTACTGTTTTTTATGTGTGTGGATCTATGCTATGC
CAGTAAGATTCAATAGTCATTAGGTTGTCTTGTGGTTGAGTGGGTGAGTGCCTTCCTTCGCTTGAATTTGTGCCCGTTGC
TGTTTTATAAATTTTAGAACGATAATCTTGGGCATATCTATTTCTTTTTTTATTAATAAGTACCTAAAGCATCCATAACT
TTCTGTCCATAACAGGAAGAAGCCACAGATGAAATTGTTATAAAGGCTATGGGAAGGGCTATCAACAAGACAGTGGCCAT
TGTGGAGCTTCTCAAGGTAGAACTGATTCAGATTGCTAGTAGATACTTACTACACCTTGCAGTGATACCAAGTTAACATT
TTCAAGCTATGTCTGAGCAGAGAAGGATTGCTGGTCTCCATCAGAATAACTCCATTGAATCAATCAATATAACTGACACT
TGGGAGCCGTTGGAAGAAGGCCTGAATGTGTAAGAAGCACTTGATTTATTAGCATAGTGTAAATACTTACCAGCTTTTGA
AGTACAGTGTGTTTCTGACAGAATTCTTGTATGACTTCTTGACAGACTCGAGACTACTCGCCATGTTTCCTTGATTACCA
TTACCTTGTCAAAGAAAGAGCTGGATACATCGTCTCCTGGGTTAGTAGCATCATCCTTTTCCT---TTTTTGTATGTCTG
ATCCATACTTGGTGGGGAGTTGTAACCTGCATATAGTTTCTCACATGCCATGGAATTTATTTCTGCGATGGTTTGTTATA
TCACGACATGGTTCTGCCTCGGTTTTTGTTATGTTTTCTCATTTGACAAGCGCATGCTCACTTGTATATAAGGACTGGAG
AGAGTTTGCAATCACTTATAACTTCAAATATTTATGTAGGAATTTTTTGCC-TAGACACGCCTTTTGCCTAGTTTAGAAA
CAATCCTGGTTTTGTTTGTTAAATAGGGCTATGCACAATTTTACTTTGGGGACTCATCTATTTGACACATTTGTAATACT
GCTTTGAATTCTGCAGTTACCAGCTACCGATACCAGCTGATCAGGTCAGGCCACCAACAGAATTTGATCAGGATGCAGAG
GACGTGCCAAGTGGCCGTGGAAGAGGCCGTGGTCGCCGGGGAAGGGGCAGGGGAAGAGGTA-AATATCTGCCTGTTTACA
CTGTATTG-------TAAGTTAACTATGGGTTTTGGTCATGTTGTTTTATTCCTAATTTTTCTTTACATTTGGGCCATTG
TGATATA--GGAGGGTTCAGTGATGGAGGGGCAGATTATGATGATGAGAATGGAGACATGGAAGGTCCACGGGGATATCG
TGGCAGAGGGAGAGGAAGGGGTAGGCGTGGGTCCTTTGGGCCTGGAAGGGGTTATGGTGGTGATGGGTATGGCTATGTAA
ATGAAGAAGCTGGTGGGTATCATGGCATGGAGCATAATGGGCCTCCTGTGCAAGGATATGGTTAGTTCTGTTTAAATTTT
CTACTAACAGCCCTCAGTTTTTAATTTTGCCCCCGGTTTTTATCACTTC-------------------------------
--------------------------------------------------------------------------------
--------ACCACTTAATTAGAGATTTGCAGAACCACAGATAATATTTAAATTCTCAATGTGATGCTAATATTGTGCTTT
GACTAAGGTAGAAAGAAGTGATGATATTATAAATTGGCATTCCTTTGAATAATTCTTTTCCAGTTGCC-------TCTCT
GAATATGGGTTTAATCACCACTAAGCAATGTTATCTTATGAATCTCCTGTGCAGAGGGTGATGGAGGAAGGGGCCGTGGT
CGAGGCCGAGGTCGTGGACGTGGCCGTGGACGCGGTGGGGGTCGTGGCCGTGGACCATTTCCTCAAGGATCTCCTCAAGA
GTAGATTGGCTGGCCCATCGACTGAATGCGACAAGTCTCATCTTTGCTAGAT-----TAATGGCTGTTGTATC------T
GGTTAGGTTTATGTTTAAAGTTGATAGAGTGACTCAGTGTG-GGGGGGATGAGGCTAGTTATGATTTTGTAGCTAGGTTA
ATTCTTCCATTTGCTTTCATATACCAGACCTGGTTATCATTCCAACTGTGCATTGTAGCATCCTGAATGTGTTTATCATT
AAATCTAGCTCAGAAAATTTGTTTATGATGTTGTTGCTGCCCATCGTTTTATTTGTTTCTGAA---------GATCCGAG
CATGGCAGCTGGAATCAATTTGCCCGGTGTGCTGACGATTTAGAGTATTCCTATGGCAATCCTTGATCAGGATTTGTGGG
CTTGGGCACACATGAAAAACATAGAAGTTACTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr2B_548
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CTGCCCACGA
AATATCGGATGAGCCCACAGATTACACGAACAAACACGCGTCCATACTGACCAGACAGGGACAAATC--TCTCTCTGACC
ACCATCGCCACCACGCGATCACAGAACCAACGGCCCAGATCCCCACGACGCGGACGCGGACCAGACCAAGGAGCCGAACA
CCCAACGCAGCACGCCGACCGAACGTGCCGGGCCCGGACACCAAAACCGGGTCCCTGTCGGACCAGGCCACCCCACGCGA
ACAAACCCTACCCTATCCGTCTCCGCTTGCTTCTCCTCCTCC--CTCCCCTCCGCTCCTATATCAGCCACCGCGACGACC
CCCTCGAGAGGCCACCGCGACTATCTCCACCGGCCGCAA---ACCACAGAGCGCCCGTCGTATTCCGAGCGAGAGGATTC
CCGTCTGCGCGTCGGCGAAGAGGGTCGAGGAGGAGCAGCGCCCATGGATCGCTACCAGAGGGTCGAGAAGCCGCGGGAGG
AGGCGCCCATCGGCGCCAACGAGATCCGCATCACGGCGCAGGGCCGCACCCGCAACTACATCACCTACGCCCTCGCCCTG
CTCCAGGTAAGCGCCGCCTTG----CCTGTCCACATCCGCTCGCCGCCGTCGGTTCCAGGGAGCGGCGGGTAGACCGTTT
TTCCTTTTTACGCCTGGCGATTTTTGGTTAGGGTTTAGTACGGGTTCAGTCCCGATGTTGGATAGGTGATTAGGGCATCC
AATCGCAGAGGTTTACTGTTCGAAGGCC-CTTGCGATCCGTTATGGTGCTATAGGCGTTGGTTTGACTAATAGTATTCGC
TCACTT---------------GGGAAGGCACCGCTTTCCGTACGATGCTTTGTTTATTGTTGCTGTTGGTGGATGTCTAG
GGTTTATGTTTGATATGCAACTTTTAGGAATCTACTGATTAGCTTTACTACTTGATACTCGATTCAAGTTTACAGTCGGG
CATTGGGATGTTATTAATTTTATTACTGTATCATCATTACTAGTATTACTGTTTTTTATGTGTGTGGATCTATACTATGC
CAGTGAGATTCAATAGTCATTAGGTTGTCTTGTGGTTGAGTGGCTGAGTGCCTTCCTTCGCTTGAATGTGTGCCCGTTGC
TGTTT--TAAGTTTTAGAACGATAATCTTGGGCATATCTATTTCTTT--TTATTAACAAGTACCTAAAGCACCTATAACT
TTCTGTCCTTAACAGGAAGAAGCTACAGATGAAATTGTTATAAAGGCTATGGGAAGGGCTATCAACAAGACAGTGGCCAT
TGTGGAGCTTCTCAAGGTAGAACTGGTTCAAATTGCTAGTAAATACTTACTACTCCTTGCAGTTATACCAAGTTAACATT
TTCAAGCTATGTCTGAGCAGAGAAGGATTGCTGGTCTCCATCAGAATAACTCCATCGAATCAATCAATATAACTGACACT
TGGGAGCCGTTGGAAGAAGGCCTGAATGTGT---AAGCACTGGATTTATTAGCATAGTGTAAACACTT-CCAGTTTTTGA
AGTACATCGTGTTTCTGACAGAATTCTTGTACGACTTCTTGACAGACTTGAGACTACTCGCCATGTTTCCTTGATTACCA
TTACCTTGTCAAAGAAAGAGCTGGATACATCGTCTCCTGGGTTAGTAGCATCATCCTTTTCCTTTCTTTTTTTATGTCTG
ATCAATACTTGGTGGGGAGTTGTAACTTGCGTATAGTTTCTCACATGCCATTGGATTTATTTCTGCGATGGTTTGTTGTA
TCACGACGTGGTTCCACCTCAGTTTTTGTTATGTTTTCTCATTTAACAAGCGCATGCTCACTAATATACAAGGACTGGAG
AGAGTTTGCAATCGCTTATAACTAAAAATATTTATGTAGGAATTTTTTGCCCTAGACACGCCTTTTGCCTATTTTAGAAG
CAATCCTGGTCTTGTCTGTTAAATAGGGCTATGCACAATTTTACTTTGGGGACTCATCTC-TTGACACATTTGAAACACG
GCTTTGAATTCTGCAGTTACCAGCTACCGATACCAGCTGATCAGGTCAGGCCACCAACAGAATTTGATCAGGATGCAGAG
GATGTGCCAAGTGGCCGTGGAAGAGGCCGTGGTCGCCGGGGAAGGGGCAGGGGAAGAGGTAAAATATCTGCCTGTTTACA
CTGTATCG-------TAAGTTAACTATGGAATTTGCTCATGTTGTTTTGTTCCTAATTTTTCTTTACATTTGGGCCATTG
TGATATATAGGAGGGTTCAGCGATGGAGGGGCAGACTACGATGATGAGAATGGAGACATGGAAGGTCCACGGGGATATCG
TGGCAGAGGGAGAGGAAGGGGTAGGCGTGGATCCTTTGGGCCTGGAAGGGGTTATGGTGGTGATGGCTATGGCTATGTAA
ATGAAGAAGCTGGTGGGTATCATGGCATGGAGCATAATGGACCTCCTGTGCAAGGATATGGTTAGTTCTGTTCAAATTTT
CTACTAACAGCCCCCAGTTTTTATCTTGATGTGAATAGTATCGTTTTTGCACTATTCATGCTGTATTTGTCTTTTTTGTT
GCTCAATGTGTTTTTCGAGTTTGGATCTGAATTTTTTGAGGTTATTATGGATACATCACTAGTAAAAAATATAGTGACTT
AATGCTAGACCACTTAATTAGAGATGTGCAGAACCACAGATAGTATTTAAAATCTCAATGTGATGCTAATATTGTGCTTT
GACTAAGGTAGAAAGTAGTGATGATATTATAAATTGGCTTTCCTTTGAATAATTCTTTCCCAGTTGCCCAACTTCTCTCT
GAATATT---------ACCACTAAGCAATGTTATCTTATGAATCTCCTGTGCAGAAGGTGATGGAGGAAGGGGCCGTGGT
CGAGGA------CGTGGACGTGGCCGTGGACGCGGTGGGGGTCGTGGCCGTGGACCATTTCCTCAAGGACCTCCTCAAGA
GTAGTTTGGCTGGCCCATCGACTGCATGCAACAAGTCTCATCTTTGCTAGAT-----TAATGGCTGTTGTAACTTTATGT
GGTTAGGTTTATGTTTAAAGTTGATAGAGTGACTCTCAGTGTGGGGGGGTGAGGCTAGTTATGATTTTGTAGCTAGGTTA
ATTCTTCCATTTGCTTTCATATACCAGACCTGGTTATCATTCCAACTGTGCATTGTAGCATCCTGAATGTGTTTATCATC
AAATCTAGCTCAGAAAATTTGTTTATGATGTTG---CTGCCCATCGTTTTATTTGTTTGTGATTTT------GATCTGAG
CATGGCAGCTGGAATCAGTTTGCCCAGTGTGCTGATGATTTAGAGTATTCCTGTGGCAAGGCTTGAATTTGTGGACTGGG
--------CACATGAAAAACATAGAAATTACTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------------------------S--------S----S-----------------------------------------
S-SS-------------S---------------------------------------------S----------------
---------S--S--S----------S------------S----S----------S-------S----------------
-------------SS-----S-----S---S-S---SSSSSSSSS-SS---S---SSSSSSSSSSSS--S---------S
---S------------------------------------------------S---------------S-----------
--------------S------------------------------S-------S-----S--------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------S------SSS--------------------------------------
--------------------S----------------S--S-----------------S-S-------------------
----------------------------------------------------S---------------------------
---------------------SSSS---------S---------------------------------------------
-------S-----S------------------------S----------------------------------------S
------S-------S-----------------------------S-----S-S-------------------S-SSSSSS
S--S--S------------------------------------------------------S------------------
-----S-------------------S---------------S--------S-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-------------------------------SS---
---------------------------------------------------------------------S----S-----
--------------------------------------------------------------------------------
---------------------S-------------------------------------------S--------------
-------S------S-----------------------------------------------------------------
--------------------------------------------------S-----------S-----------------
S----------------------------------------S--------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
---S-------S--------S------------------------S----------------------------------
-----------------------------------------------------S--------------------------
----------------------------------------------------S--------------S------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
------SSSSSSSSS-------------------------------------------S---------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
----S--------------------------------S--------------------------------S--------S
--S-----------S-----S--S--S--------------------------------S--S-----------------
--------------------------------S-----------------SSSSSSS-----------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------S----------------S-----S------
------------------------------------S--S------------------------S-SSSSSS--------
-----------------------S-----------------------------------------S-S------------
------S----------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TATCTCCACCGACCGCAAAC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2871
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGGGATATCG
TGGCAGAGGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_1677
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TCGCTTGAATTTGTGCCCAC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3829
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------TTTTGATCCGAG
CATGGCAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
