>input_sequence_34086
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----ATGGCGGCGCCCAGGCCCAAGTCCCCGCTCGACCCCTGCGGCCGCCACCGGCTGCAGCTCGCCGTCGACGCGCTCC
ACCGCCAGATCAGCTTCCTCGAGGTAACCAAGCTCCTGACCTTAATCGCTCTTCCTGGTTGGCTCCCGCACTACTGCCAT
GATAAATGATGCC------CTGCTGTTACTCAGTTATTCCGCAAGA--AAAATTACAGTACTAATTAGCAGCTGAGCATG
T---ACAAATGATCGCCATTTCTTTATAGGTATGAGTACTCTATTATAGGTATCTAAAGTCCGCTACCAACACACAGTTT
GGTTGTC-------ACTTCTAAGTCAGTTCCAAGTGTTCTTTTCTACTACTACTAGATTCTAGAGTAAGTGTTAAAATAT
CCCCCCAGTTTAGCAGTAAGCATACAAAAATGATCAGCATTTCTTTATAGGTTGGTTGCCAACACACGGTTTGGTTGTCA
CTTCTCAGTCAATTCCAGGTGTTCCTTTCTAGTACTCCCTCCGTTCCAAATTAGTCGTCGTGGTTTTAGTTCAAATTAAA
ACTAAAACCACGACGAGTAATTTGGAACGGTGGGAGTAGTAGTAGATTCCAAGTGTTGTTAAAATATCCCAGACAGCAGC
CTGAAAAGTTGACACATGCCCTCTCCTCCTTGTACTGTATTGCTAGTAGCTATACTAGCTAGTAGCTACTGCTTTTTTT-
CAATAAAAAAAATCATTTCTATGGAATTCAAGAAACTGTTCT-TCTGTGCCAGGGGGAGATCAGTTCCATTGAAGGGCTC
CATGCTGCCTCCATATGCTGCAAAGAGTAAGCCGCTGTC-TTGTTCAATTCTTATACTATCAATTTCCTTTTTGAAATTT
AAGAGGTAACTTAGGGAGCGAAAACAAGAAATAGTTCTCCGGCTCCAAGAATGGAAAACAATCCATGGCAAGTGAGCCCA
TGTTTCCATAGAGTTGTACAGATGCGTGCAAGACATCAACATGGATGTGTGAAGGCAACACAGATTTTAGTTAAAACCTC
TAAATAGAAGTTTCGCGTTTTAGCCAAGAAATGTCGCTCTCAGTGGAGATTTATACAATAATACTCCCTCCGTCCCAAAA
TTCTTGTCTTAGATTTGTCTAAATACAGATGTATCAAGTCACGTTTTAGTATTAGATACATCCGTATCTAGACTAATCTA
AGACAAGAATTTTGGGACGGAGGGAGTAGATTACTATCTACGACCATGGGCTTCCACACCAATGATTGAAAATAGTATAC
ACTTACAACTGAACATTATGCAAATCCGGTAGCAATAGTTTGGGAGATTTGGTTAGTTGAAATTTGATTAGGATGATTGA
TTGTATTTAAATACGTGAATATGTTTTGGAATTGGACTTAAATTACATAGGGTTGCGGT-------------GTGCTTTT
ATTTTCATCTCCAGTCTTGGTGCCACTTATTACTTTATTCTTCTTCATAAATGAATATCAGTGTAAGCTGCATACGTAGC
AGTCAGATCATGCGTGCAAAAGGCAAAAATATGTAATTCTTCTTCATGTGTCAATCAGTTCACACAATTGTGCCAATTTT
AAGTTAATTTTCTTCTTGTTCATGACATATGGAGGTGATTGATCGTCGTTTGCCCCTTTGATAAAATTTGCAGGGTCGAT
GAGTTCATAGGAAAGAATGCCGATCCATTCATCACGATGTATGGATTTTCAGGTTGAGAAATTGTCTTGGCCTACAAGAT
ATCTTTGTTCTTACTAGTATCTCTCTTTACAAGCTTGCAGTTCATCTGAGAAGGGAAATGCTGATCAATCTCATCGCTTC
CCAAAGAAGATTCGGTAATCATTTCCTCCCTGCAGATCTTAATATATGTTGATGGTTGTCTTGAAAGAAAATGACGCCGG
ATCAACCCAAGCTGATGCAAATTGTTATCCTAAACTGCAC----------TTGAAGCATTTAAAAGTTTGAAATATTGCT
AATTTTCCGGTTTTTACATCTGCACTCTACAAACCTTAACAATTATTTGTCAGCCAGTAATGCATGCATCGATTTGAACT
CGTTTTTAGTTAGC-CGTTGTAGTGAACTGACCGAGGGGGATGTTAATGTTTGTGTCTGCAGAACCCGGTGGGCGTGTTT
GAGCTGCTTCCCGTGGATCTGCGGCGGCGGGTGCTCCGCCGTCCAGCTCAAGGGGCCGAGCTGCTGCTGCGGATGCCCCC
GTTGCTGCGTGGGGAGCGGGGGCTGCGGCGGCGGA---CCCTCGTGTGGCTGCTCATGCTCCTGCGCCGGTTGCTCCTCC
TCTTGCGCGTGCCCTGCCTGCGCCGGCTGCGGCGCCGCGTGCTGCGGCGGTGCCCCTCGCCCTCGCTGCTGCCTGTGTTC
ATGA----------------------------------------------------------------------------
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-------------------------------------------
>chr7D_1_TraesCS7D01G015000
AAGGAGCAAATGAGGGGAGAGGACAGTACATTGTTGTCAGAGGTGCGACATGTTGCAGTATCGCTTGTTGTCAGAGGTGC
AACATGTTTCTGCATCACCACGTGCCTATGTTTGTACATAGTTCTTGGAGATCTTTTCGGGCTTTTAGATGTTGGAACTT
TTATCTATCTGTTGATGAGGCTTTGTGGCATGTATAGTCAGGGCATGGTTGCGCATGTTGTTTTGGAGAGGGGAGAGGGG
AAAGTGTTTATTGCCCACGAAGGAAGACCGTTTCTGTGTGTAATTCTTTGTTTTGAGCTGATTTTGTTT-----------
---------------------GTAAGTCCATTATCTTCATCGTCATATGAGGACGGATTTGGACTATGTATGC--AGTGA
ACTCTTTTCGTCTCGTCTACTA---------------TCATTGATCATGT------TTTTTCCGAACGAAAAATGATAAT
CAAGTCGTCAATCAGCTACTAGCATTTGCCAAAGTTGCTTTG--TTTTTTAACCCCAAAAGAACTGGACTTGATTAGCTG
CTTCAGAAAAGAACAAAATGCTAA----------------------------CAGTTTTTTTATTT--------AGAGTG
GAGTCAAAGGATGGAGAGAAG---TGGTGGTCGTGGTAGGCCCGCCACGATCCAGCCGGCCCAGCAGCCTTGGTTAACCC
TACCCACTACCCACCACCA------CCTACCTACCCCAGTGGCCAGCCCTATA----GACGACTTCCTGTCTCCTT---C
CGGCGGCCACCTCCGTCCATCGCTCTCC-----------GCCGCCGCCGCCACCCGGACTCTAAATCCCTTGCTCCTCTC
CACCGGAAACCTTGACCGGCCGAGGAGGCAGCACATTCACACCGGCGGCGTGATCTGGTCTGGTCTGCTAGATTGATCGT
TCATTCACTCCATTGATGACGCTCTCTGCTTCCCCGCACTCCCCGCCGCCGTCTACCTCCCGGCCCCCGCTCCTCTCCTG
GCCCAGCTAGCCAGC----CGGCGCGAGCGAGCGAGCTCCCCGTCCACCGTCCAGCTATTAGCCAAGCTCCTTCGAGGCC
GGCAATGGCGGCGCCCAGGCCCAAGTCCCCGCTCGACCCCTGCGGCCGCCACCGGCTGCAGCTCGCCGTCGACGCGCTCC
ACCGCCAGATCAGCTTCCTCGAGGTAACCAAGCTCCTGACCTTAATCGCTCTTCCTGGTTGGCTCCCGCACTACTGCCAT
GATAAATGATGCC------CTGCTGTTACTCAGTTATTCCGCAAGA--AAAATTACAGTACTAATTAGCAGCTGAGCATG
T---ACAAATGATCGCCATTTCTTTATAGGTATGAGTACTCTATTATAGGTATCTAAAGTCCGCTACCAACACACAGTTT
GGTTGTC-------ACTTCTAAGTCAGTTCCAAGTGTTCTTTTCTACTACTACTAGATTCTAGAGTAAGTGTTAAAATAT
CCCCCCAGTTTAGCAGTAAGCATACAAAAATGATCAGCATTTCTTTATAGGTTGGTTGCCAACACACGGTTTGGTTGTCA
CTTCTCAGTCAATTCCAGGTGTTCCTTTCTAGTACTCCCTCCGTTCCAAATTAGTCGTCGTGGTTTTAGTTCAAATTAAA
ACTAAAACCACGACGAGTAATTTGGAACGGTGGGAGTAGTAGTAGATTCCAAGTGTTGTTAAAATATCCCAGACAGCAGC
CTGAAAAGTTGACACATGCCCTCTCCTCCTTGTACTGTATTGCTAGTAGCTATACTAGCTAGTAGCTACTGCTTTTTTT-
CAATAAAAAAAATCATTTCTATGGAATTCAAGAAACTGTTCT-TCTGTGCCAGGGGGAGATCAGTTCCATTGAAGGGCTC
CATGCTGCCTCCATATGCTGCAAAGAGTAAGCCGCTGTC-TTGTTCAATTCTTATACTATCAATTTCCTTTTTGAAATTT
AAGAGGTAACTTAGGGAGCGAAAACAAGAAATAGTTCTCCGGCTCCAAGAATGGAAAACAATCCATGGCAAGTGAGCCCA
TGTTTCCATAGAGTTGTACAGATGCGTGCAAGACATCAACATGGATGTGTGAAGGCAACACAGATTTTAGTTAAAACCTC
TAAATAGAAGTTTCGCGTTTTAGCCAAGAAATGTCGCTCTCAGTGGAGATTTATACAATAATACTCCCTCCGTCCCAAAA
TTCTTGTCTTAGATTTGTCTAAATACAGATGTATCAAGTCACGTTTTAGTATTAGATACATCCGTATCTAGACTAATCTA
AGACAAGAATTTTGGGACGGAGGGAGTAGATTACTATCTACGACCATGGGCTTCCACACCAATGATTGAAAATAGTATAC
ACTTACAACTGAACATTATGCAAATCCGGTAGCAATAGTTTGGGAGATTTGGTTAGTTGAAATTTGATTAGGATGATTGA
TTGTATTTAAATACGTGAATATGTTTTGGAATTGGACTTAAATTACATAGGGTTGCGGT-------------GTGCTTTT
ATTTTCATCTCCAGTCTTGGTGCCACTTATTACTTTATTCTTCTTCATAAATGAATATCAGTGTAAGCTGCATACGTAGC
AGTCAGATCATGCGTGCAAAAGGCAAAAATATGTAATTCTTCTTCATGTGTCAATCAGTTCACACAATTGTGCCAATTTT
AAGTTAATTTTCTTCTTGTTCATGACATATGGAGGTGATTGATCGTCGTTTGCCCCTTTGATAAAATTTGCAGGGTCGAT
GAGTTCATAGGAAAGAATGCCGATCCATTCATCACGATGTATGGATTTTCAGGTTGAGAAATTGTCTTGGCCTACAAGAT
ATCTTTGTTCTTACTAGTATCTCTCTTTACAAGCTTGCAGTTCATCTGAGAAGGGAAATGCTGATCAATCTCATCGCTTC
CCAAAGAAGATTCGGTAATCATTTCCTCCCTGCAGATCTTAATATATGTTGATGGTTGTCTTGAAAGAAAATGACGCCGG
ATCAACCCAAGCTGATGCAAATTGTTATCCTAAACTGCAC----------TTGAAGCATTTAAAAGTTTGAAATATTGCT
AATTTTCCGGTTTTTACATCTGCACTCTACAAACCTTAACAATTATTTGTCAGCCAGTAATGCATGCATCGATTTGAACT
CGTTTTTAGTTAGC-CGTTGTAGTGAACTGACCGAGGGGGATGTTAATGTTTGTGTCTGCAGAACCCGGTGGGCGTGTTT
GAGCTGCTTCCCGTGGATCTGCGGCGGCGGGTGCTCCGCCGTCCAGCTCAAGGGGCCGAGCTGCTGCTGCGGATGCCCCC
GTTGCTGCGTGGGGAGCGGGGGCTGCGGCGGCGGA---CCCTCGTGTGGCTGCTCATGCTCCTGCGCCGGTTGCTCCTCC
TCTTGCGCGTGCCCTGCCTGCGCCGGCTGCGGCGCCGCGTGCTGCGGCGGTGCCCCTCGCCCTCGCTGCTGCCTGTGTTC
ATGAGGCGCCCTATTGAGATTTTTCCTCTTCTTT---GTTCTTGCTGTGTGCGTTGCCTGTAGG-------CTCAGGCTC
GGCTGGTGTTTTTGACGGGCATGATGATGATGATGTATTTCTGGCTCAGTTGGCGCTGTGGATTTGCCTGGTTTTACTTG
CCACAGCGATGGATCCCTTGTGCTTTCGTCCTTGCTATAGTCTCCTATGTTGTAATTAAAGGTTTGGAGATAACTGCAGA
ATGAACGGTTCTTCTCACTGATGA-------TGGTTAGGGTGTATATATACCCAGTTAGAGCATTTCTAGTGTAAAAGGC
CTCGGAGATGCGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TGGATGG
CATCGTCATACGCCGCGGAGGGCCACTGCACAAGGCAGCCGATGTGCATCCCGAGGTCATCGGCACCTCGCGCTCGTCGC
CGCACCCCGTCGGCTGGCCACGAGCCGCTCGCCACCAGGGCCATGGCGGCGGCCGATGTCGATGCCATCGCGCCCCTCGC
ACTCGACGCGGGCTGCCAAGGAGCTGCTCGGCAC-GTTGCCATGGCGGTGGCCAGGACCCAATTGTAATCTACATTTTGC
TTTTAGGGGGCTTTATGCTAAT-TTCAGGGACCCTGTTGTAAATTTAACTAGTGATAAGTGGGCTTCTACATCTGAGCTG
AAACGATTTTTACGGGATTTGTTCTGGCAGAACACACGCCATACTGTTACAGTATATCCGAAACGATTTTGCAGTATGAG
ATTTTACGAGACCTGCTAGAGATGCTCTTAGCGGATCTCCAACGCGGTGCCACAAAACGTCCAGACTGACGCATCCAGAC
TTTTTTGTCATCCAATGTGATGCGGCATACGTCTCGCGTGTTCGAGTTCCTGCAAGTCAGATGTAATGTTGGGGAGGTTT
GCGGGAGTCAGGACCTTTGCCACGTAGGATTCCGACAACCCCTCCCCCCTCCAAAAATAAACCCCACTTGGAGCCCCCGT
GCGATAAAGTCCGCGCATTCCCACCCCCTCCAGCCGATTGTCG
>chr7A_1
AAGGAGCAAATGAGGGGAGAGGACAGTACATTGTTGTTAGAGGTGCGACATGTTGCAGCATCGCTTGTTGTCAGAGGTGC
AACATGTTGCTGCATCACCGCGTGCCTATGTTTGTAAATAGTTCTTCGAGATGTTTTCGGGCTCTTAGATGTGGGAACTT
ATATCTATCTGTCGATGAGGCTTTGTGGCATGTATAGTCAAGGCATGGTTGCGCATGTTGTTTCGGAGAGGGAGGAGGGG
AAAGTGTT-ATTACCCACGAAGAAATACCGTTCTTGTGTGTAATTCTTTGTTTGGAGATGAT----TTT-----------
---------------------GTAAGTCTATTATCGTCATCGTCAT--GAGG--GGATTTGGGCTATGTATGC--AGTGA
ACTCTTTTCGCCTCGTCGTCTACTAGCTAGTTCGTGTTGTTAAATAGTTGATTATGTTTTTTCGAACAAATAATGATACT
CAAATCATCAATCAGCTAGTAACATTTTGCAAAATTGCCTTG--ATTTTTAATCCCAAAAAA--TGGACTTGACTAGCTA
CTTCAGAAAAGAACAAAATGCTATTAGCAATATTTTTGTTTTAGAATGAAGTCATTTTTTTTCTTTTTGAGACAAGAATG
GAGTCAATGGAAGGAGAGAAGAAGTGCTGGTCCTGGTAGGCCCGCCACGATCCAGCCGGCCCAGCAGCCTTGCTTAACCC
TACCCGCCACCTACC-------------ACCTACCCCAGTGGCCAGCCCTATA----GACGACTTCCTGTCTCCTT---C
CGGCGGCCACCTCCGTCCGTCTCTCTCCCCCTCTCCGCCGCCGCCGCCGCCGCCCGGCCTCTAAACCCCCTTGGTCCTCC
CCCCAGCCCC---------------------------CACACCGGCGGCGTGATCTGCTCTGGTCTGCTAGATTGATCGC
CCATTCATTCCATTGATGACGCTCTCTGGCTCCCCGCACTCCCCGCCGCCGTCCACCAGCCGCCCCCCGCTCCTCTCCTG
GCCTAGCTAGCCAGCCAGCCGGCGCGAGCGACCCCTCCATCCA-CCACCGTCCAGCTAGCTAGCTAGCTCCTTCGAGGCC
GGCAATGGCGGCGCCCAGGCCCAAGTCCCCGCTCGACCCCTGCGGCCGCCACCGCCTGCAGCTCGCCGTCGACGCGCTCC
ACCGCCAGATCAGCTTCCTCGAGGTAACTAAGCTCCTAATCCCGACTGACTCGCACAATATACCCTGTAAAG--------
-----ATGATGCT------CTGCTGTTACTCTGTTATCACGCAAGA--AAAAC-----TACTGACTAGCAGTTGAGCATA
C---ACAAATGATCACCATTTCTTTACAGGTGTCTAGGC-------------TCTAGAGTCTGTTACCAGCACACAGTTT
AGTTGTCACTTCCAACTTCTAAGTCAATTCCAAGTGTTCCTTTCTGCTACTACTGCTAC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TAGATTCTTAG---TGTTAAAATATCCCAGACAGCAAC
CTGAAAAGTTGACACATGCCCTTTTCTCCCTGTACTATATTGCTAGTTG-----CTAGCTAGTAGCTACTGCTTTTTTT-
CAGT--AAAAAATAATTTCTCTGGAATTCAAGAAACTATTCT-TATGTGCCAGGGGGAGATCAATTCCATTGAAGGGCTC
CATGCTGCCTCCATATGCTGCAAAGAGTAAGCTGCTGTGTTTGTTCAGTTCTTA---TATCAGTTTTGTTTTTGAAATTT
AAGAGATAAGGTAGGGAACGAAAACAAGAAATAGTTCTCCGGCTGCAAGAATGGAGAACAATCCATTACAAGTGAGCCCA
TGTTTGAATAAAGTCGTACAGATGCGTGCAACACATCTACATGGATGTGTGAAGGCAACACAGGTTTTAGTTAAAACCTC
TAAATGGAGGTTTCACATTTTAGCCAAGAAATGTCGCTCTCAGTGGAAACTTGTACAA----------------------
--------------------------------------------------------------------------------
--------------------------TACATTGCTATCTACTACCATGGGCTTCCACACCAATGATTGAAAATAGTATAC
ACTTACAACTGAACATTATGCAAATCTGGTAGCAATAGTTTGGGAGGTTTGATTACTTGGAATTTGATTAGGATGATTGA
TTGTATTTAGATATATGAATATGTTTTGGAACTGGACTTCAATTATATATGGTTGCGT----TGTACAGGCAGTGCTTTT
ATTTTCATCTCCAGTCTCAGTGCCACTGATTACTTTATTCTTCTTCATAAATGAATATCAGGGTAAGTTACAAACGTAGC
AGTCAGATCATTTGTGCAAAAGGCAAAAATATGTAATTCTTCTTCATATGTCAATCAGTTCACACA-TTGTGCCAGTTTT
AAGTTAATTTTCTTCTTGTTCATGACAAATGGAGGTGATTGATCGTCGTTTGCCCCTTTGATAAAATTTGCAGGGTCGAT
GAGTTCATAGGAAAGAATGCCGATCCATTCATAACGATGTATGGATTTTCAGGTTGAGAAATTGTCATGGCCTACAAGAT
ATCTTTGTTCTTACTAGTATCTCTCTTTACAAGCTTGCAGTTCATCTGAGAAGGGAAACGCCGAGCAATCTCATCCCTTC
CCAAAGAAGATCCGGTAATCATTTTCTTCCCGCAGATCTTAATATATGTTGATGGGTCACTGGAAAGAAAATGCTGCCAG
ATCAACCCAAGCTGATTCAAATTGTTGTACTAAACTTCACATGTTTATATTTAAAGCATTTAGAAGTTTGAAATATTGCT
AGTTTTCCCATTTTTACATCTGCACTCTGCAAACCTTGACAATTATGAATCAGCCAGTAATTCGTGCATCGATTTGAACT
CGTTTTTCATCAGTCA-TTGTAATGAACTGACTGAGGGGGATGTTAATGTCTGTGTCTGCAGAACCCGGTGGGCGTGTTT
GAGCTGCTTCCCGTGGATCTGCGGCGGTGGGTGCTCCGCCGTCCAGCTCAAGGGGCCGAGCTGCTGCTGCGGATGCCCCC
GGTGCTGCGCGGGGAGCGGGGGCTGCGGCGGCGGA---CCCTCGTGTGGCTGCTCATGCTCCTGCGCCGGTTGCTCCTCA
TCTTGCGCGTGCCCTGCCTGTGCCGGCTGCGGCACCGTGTGCTGCGGCGGCGTCCCTCGCCCTCGCTGCTGCCTGTGTTC
ATGAGGCGCCGAATTGAGATTTTTCTTCTTCATT---GTTCTTGCTGTGTGCGTTGCCTGTAGGCCC-AGTCTCAGGCTC
AGCTGGTGTTTTTGACGGGCATGATCATGTC---GTATTTCTGGCTCAGTTGGCGCTGTGGATTTGC---GTTTTACTTG
CCACGGAGATGGATCACTTGTGCTTTCGTTCTTGCTATAGTCTCCTACGTTTTAATTAAAGCTTTAGAGATAACTGCAGA
ATGAACTGTTTTTCTCACTGATGA-------TGGTTAGGGTGTAT---TACCCGGTTAGAGCATCTCTAGCTGATCCCGT
AAAAAAGGCCTTGGCCCTTATAATAACTGCGGTTTTTGGTTTTTGTCAGGAAAAAAAATGACCCAAGCAGATCCTGCATT
TT-GCCAAACTGTAAATCTTTTTCCAGCTCCCCCTATGAGGCCAACTGCCTAATATCTTCAGTTTTTGAGGCCATTTTTC
AGCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCAGGATCAAGCCGAGATGTGGCGCCTCGCCGTGGCCCGGTGGCCGGCGAACACGGCAGCGCGCCCAAAGTGGATGG
CATCGTCATACACCATGGAGGGCCATTGCACGAGGCGGCCAATGTGCATCCTGAGGTCATCGGCACCTCGCGCTCGTCGA
CGCACCCCGTCGGCTGGCCACGAGCCGCTCGCCACCATGGCCATGGCGGCGGCCGATGTCGATGCCATTGCGCCCCTCGC
ACTCGACGTGGGCTGCCAAGGAGCCTCTCGGCACTGTTGCCATGGCGGTGGTCAGGACCCAATTGTAACCTACATTTTGC
TTTTAGGGGGCTTTATGCTAATATTT-GGGACCCTGTTGTCAATTGAACTAGTGATAAGTGGGCTTCTACATCTGACCTG
AAACGATTTTTACAGGATTTGTTCTG-CAGAACACACATCATACTGTTACAGTATATCCGAAACGATTTTGCAGTATGAG
ATTTTACGAGACCTGCTAGAGATGTTCTTAGTGGATCTCCTACGC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr4A_65
----------------------------------------------------------------TTGTTGTCAAAGTTGC
GACATGTTAATGCATCGCC----GCCTATTTTTGTACATATTTCTTGGAGATGTTCTCGGGCTCTTAGGCCTGGGAACTT
TTACCTATCCGGC---------TTGTGGCATGTATAGTCAGGACATGGTTGCGCATGTTGTTTTGGAGAGGGGAGAGGGG
AAAGTGTTTATTACCCATGAAGGAAGACCGTTCTTGTGTGTAATTCTTTGTTTAGAGATGAT----TTTTTTTGAGGGAT
TGTTTCGAGATGATTTTGTTTGTAAGTCTATTATCTACATCGTCAT--GAGGACGGATTTGGACTATATATTTGTAGTGA
ACGCTTTTCGTCTCGTTGTCTACTTTGTAGTTCGTGTTCATCAATAATGT------TTTCTCAAT-CGAAAAATGATAAT
CAAGTCATCAATCAGCTAGTAACATTTTGCGAAAATTGCTTTGTTTTTTTAATCCCAAAAAAA-TGGACTTGATTGGCTA
CTTCAGAGAAGGAAAAAATGCTAATGA-----------------------------TTTTTTTTTT--------AGAATG
GAGTCAAAGGAAGGAGAGAAG---TGGTGGTCGTGGTAGGCCCGCGAGGGTCCATCCGGCCCAGCAGCCTTGGCTAACCC
TACCCACTACCCACCACCTACCTACCCTACCTACCCCAGTCTCCAGCCCTACAGACCGACGACTTCCTGTCTCCTCCTCC
CGGCGGCCACCTCCGTCCATCGCTCTCCCCCCCTCTCT--CCGCCGCCGCCGCCGGGCCTCTGAATCCCCTTGCTCCTCC
TT-----------------CCGAGGAGGCAGCACATCAGCATCAGCGGCGTGATCTGATCCGGTCTGCTAGACTGATCGC
TCATTCACTCCATTGATGACGCTCTCTGCTTCCCCGCACTCCCCGCCGCCGTCCACCTCCCGCCCCCCGCTCCTCTCCTG
GCCCAGCTAGCCAGC----CGGCGCGAGCGAGCCCTCCATCCA-CCACCGTCCAGCTAGCCAG---GCTCCTCCGAGGCC
GGCAATGGCGGCGCCCAGGCCCAAGTCCCCGCTCGACCCCTGCGGCCGCCGCCGGCTGCAGCTCGCCGTCGACGCGCTCC
ACCGCCAGATCAGCTTCCTCGAGGTACCCAAGCTCCTGACCTTAATCGCTCTTCCTGGTTGGCTCCCGCACCACAGCCCT
GTTACATGGTGCCCTGCTGCTGCTGTTACTCTGTTATTATTACCCAAGAAAAT-----TACTAATTTGCAATTGAGCCTA
CACAACAAATGATTACCATTTTTATACAGTAGTAGGTAT---------------TAGAGTCTGTTACCAGCACACAGTTT
AGTTGTCACTTC-------TAAGTCAGTTCCAGGTGTCCCTTTCTACTACTACTACTACTACTG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTAGTAGATTCTAAG---TGTTAGAATATCCCACACAGCAGC
CTGAAAAGTTGGCACATGCCCTCTCCTCCTTGTACT------------------CTAGCTTGTAGCTACTGCTTTTTTTT
CAGT--AAAAAATAATTTCTCTGGAATTCAACAAGCTGTTCTCTCTGTGCCAGGGGGAGATCAGTTCCATTGAAGGGCTC
CATGCTGCCTCCATATGCTGCAAAGAGTAAGCTGCTGTC-TTGTTCAATTCTTATACTATCAATTTCCTTTTTGAAGTTT
AAGAGGTAACTTGGGGAGTGAAAACAAGAAACAGTTCTCCGGCTCCAAGAATGGGGAACAATCCATTGCAAGTGAGCCCA
TGTTTGAACAAAGTCGTACAGACAGGTGCAACACATCTACATGGATGTGTGAAAGCAACACAGATTTTAGTTAAAACCTA
CAAATGGAAGTTTAGCAAATCCGGT-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AATGATTGAAAATAGTATAC
ACGTACAGTTGAACATTATGCAAATCTGGTAACGATAGTTTAGGAGGTTTGGTTACTTGAAATTTGATTAGGATGATTGA
TTGTATTTAAACATATGAATATGTTTTAGAATTGGACCTAAATTATATAGGGTTGCGGTGACTGTACAGGCAGTTCTTGT
ATTTCTGTCTCCAGTCTTAGTGCCACTGTTTACTTTATTCTTCTTCATAAATGAATATCAGCGTAAGCTGCAGACGTAGC
AGTCAGGTCATGTGTGCAAAAGCCAAAAATATGTAATTCTTCTTCATATGTCAATCAGTTCACATAGTTGTGCCAATTTT
AAGTTAATTTTCTTCTTGTTCATGACATATGGAGCTGATTGATCGCTGTTTGCCCCTTTGATAAAATTTGCAGGGTCGAT
GAGTTCATAGGAAAGAATGCCGATCCATTCATAACGATGTATGGATTTTCAGGTTGAGAAATTGTCTTGGCCTACAAGAT
ATCTTTGTTCTTACTAGTATCTCTCTTTACAAGCTTGCAGTTCATCTGAGAAGGGGAACGCCGATCAATCTCATCGCTCC
CCAAAGAAGATTCGGTAATCATTTTCTTCCCGCAGATCCTAATATATGTCGACGGTTCTCTCGAAAGAAAATGATGCCGG
ATCAACCCAAGCTGATGCAAATTGTTGTACTAAACTGCACATGTTTATATTTAAAAGT--------TTTGGAATATTGAT
AATTTTCCCAGTTTTACATCTGCGCTCTACAAACCATAACAATTATGAATCAGCCAGCAATGCATGCATCGATTTGAACT
CGGTTTTAGTAGTCTCGTTGTAATGAACTGACTGAGGGGAATGTTAATGTTTGTGCCTGCAGAACCCGGTGGGCGTGTTT
GAGCTGCTTCCCGTGGATCTGCGGCGGCGGGTGCTCTGCCGTCCAGCTCAAGGGGCCGAGCTGCTGCTGCGGATGCCCCC
GCTGCTGCGCGGGGAGCGGGGGCTGCGGCGGCGGCGGGCCCTCGTGTGGCTGCTCGTGCTCCTGCGCCGGCTGCTCCTCC
TCTTGCGCGTGCCCTGCCTGTGCCGGCTGCGGCCCCGCGTGCTGCGGCGGTGTCCCTCGCCCTCGCTGCTGCCTGTGTTC
ATGAGGCGCCGTATTGAGATTTTTCTTCTTCTTCTTCGTTCTTGCTGTGTGCGTTGTGCGTTGCCTGTAGGCTCAGGCTC
GGCTGGTGTTTTTGACGGGCATGACGATGATGATGTATTTCTGGCTCAGTTGGCGCTGTGGATTTGCCTGGTTTTACTTG
CCGCAGAGAAGGATCGCTTGGGCCTTCGTCCTTCCTATAGTCTCCTACGTTGTAATTAAAGCTTTGGAGATAACTGCAGA
ATGAACGGGTTTTCTCACTGATGAGTGATGATGGTCAGGGTGTATATATGCCCAGTTAGAGCAT----------------
------------------------------GGTTTCCGGTTTTTGTCCC---AAAAAATGACCCGAGCAGATCCTGCATT
TTCGCCAAACCGTAAATATTTTGCCTTTAGCCATAAAATGACTCGGCGCCACGCGACGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CACGTCGCTGGCTAGCCAGGAGCCGCTTGGTGC---------------------------------------------
---------------------------------C-GTTGCCGGGGCGGCGGCCAGGACCCAATTGTAATCTACA-TTTGC
TTTTAGGGGGCTTTATGCTATT-TTT-AGGACCCTGTTGTAAATTTAACTACTAACAAGTGGGCTTCTACATATGACCCG
AAACGAGTTTTATGAGATCTGTTCAGGCGGAACACACACCTTAGTGCTATAGTATATCCGAAACGATTTTACAGTAGGAG
ATTTTACGAGACCTGCCAGAGATGCTCTTAGCGGATCTCCAACGTCGAGCCACAAAACGTACAGACCGACGCATCCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
-------------------------------------S--------------------S---------------------
--------S----------S--------------------------------S----------S--------S-------
------------S-------------------------------------------------------------------
------------S-------------------SS-------------------S---S----SSSS--------------
----------------------------S-----------------SS--------------------------------
-----------------SS----------------------SS--S----------------------------------
------S-----------S--S-----SS----S----S-------------S-------S--S---------------S
------------------------------------------------------S-------S--------------S--
-----------S--------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------------------------------------------S-----S-----------S-SSSS-SSS-
-S--S-SSS-SSSSSSSSS-----------------S--------------------S---------------------S
-----------------------------------------------------S--------S-----------------
---------------------------------SSS-SSS--SS--------------SSSSS-S---------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--S---S-
-S--S--------------------------S------S--------------SSSSS-------------S-------S
S-------------S-----------S----S-SS----SSSSSSSSSSSSS----S----S-S-----S----------
S--------------------------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---SSS------------------------
------------------------------------S----------S-SSSSS--------------------------
--S-SS-------S------S-----------------------------------------------------------
--------------------------------S-----------------------------------------------
-------------------------------------------------------S----------S-------------
-----SS---S---S----------------S-----S------------------------------------------
-----S----------S------------------------------S-S--S-----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS--S---S--------S--------------------------------------
--------------------------S-------------------S--------S------------------------
-------------SS------------------------------S----------------------------------
------------------S--------S---------------------------------S----------S-------
------------S----------------------------------S------------------S-------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------------------------------S--S------------------
------------------------S--S--S--------------------------S---S------------S-----
--------------------------S-S-----------------------S---------S-----------------
--------SS------------------------------------SSS-------------------------------
----------S-----------S---------S-----------------------------------------------
--------------------------------------------------------------------------------
-S-------S----------------------------------------------------------------------
--------------------S------------S------------------S---------------------------
----------S--------------S------------------------------------------------------
--------------------------------------------------------------------------------
------S--------S-------------------------------S-------------S------------------
----------S-----------------------------------------------------S-----SSS-SSSS-S
SSSSS--SSSSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--SS---------S-----S----S---S----------S---------------------------S
-------------------------------------S------------------------------S-----------
--------S---------------SS------------------------------------------------------
-------------------------SS-------------------------------------------------S---
-------------------------------------S------------------------------------------
---------------------------------------------S-S------------S-----S----------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCACGAAGGAAGACCGTTT-----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_2331
--------------------------------------------------------------------------------
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----------TTTGGGACGGAGGGAGTAGA--------------------------------------------------
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>forward_2087
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-------------------------------------------------------------------GCAAGTGAGCCCA
TGTTTCC-------------------------------------------------------------------------
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-------------------------------------------
>reverse_3696
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---------------CCTTGTGCTTTCGTCCTTGC---------------------------------------------
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-------------------------------------------
