>input_sequence_33986
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----------------------------------------------------------------ATGGCGGAGAGGCGGT
CCGGCTACAGGGACTGGGACA------GGGACAGGGCGGCGTCCGAGGCCGGCAGGTACTGGAGGCCGCCGCGTTCCCAG
GCTCACGGTGCGTTTCCTGATCCGTCCTCGTCTTGTTCGCAGCCTTGTCTGTTTCCGCGCTTGCCGTT-GGCTTGGAGGG
GTCGCGTCGTTTTCCCCTTTCCTTTCCTGAGTTGGAGATCTAGA---ATGCGCAGGGAGTAGGCCACACTCTCCCTTTCA
CGATCCGTGTGTTTCTGGCAGTGTCTAGACGCGGTAACTAACATTTTGGGTAAAATTCGGTCGGCAGGTGGGTAGTAAAA
TCATGCA---AGTAGTATGTGCCGACACTACAAGGAAAATAACGTGCGTGGATACTTATGCTGGTTTACTGCTTCCTTCG
TGGGTCTAATAATGCTTGTGCATTTGCTTGGCTTGAATTGATGAAAATATGAAGCATGTTCTAAGAAATCGCAGAGCTAA
TGTTTATGTGTATGGCCTCTGAGCTCACACATATACTATTTATTTATTATGCATATGCTGACGCTTATATTTGAACCTTT
AG-TAGTAATTTTGGTCTTGAATGTGAAACTGTGGAGTTTATCAAG----TTGATCATTACATGTTCAATGGAGCTCTGA
TCTTTCAGTGCCAATTGTTTACAAGAATTATCAGTGTGAATGTTCTTTGCAGTTTTACAAGAATGCTGATATGATATCAT
ATTTTGCTAAACAGGGAAATTAATGTTTCAGTAATACT------------------------------------------
------------------------------------------AAACGACTGCTCAACATTTTAAGCCTTGTAAAAATAGA
TAGGGGTCAACCCCTCATCTTCCCATTCAAGTGCTCTGCCAGTGCTCAAGTAAAGAGTTGAATAGGATGTTTCTGTGATT
ACAACATTGGATGGGTTCTTTGGAAGTTCCCTTTGTTTTTAATGAGCTATGC----------------------------
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---------GATGTCCTAATGCCCTCATGTTTTTGGAAATTTTCTTTGTTGTGACATATCAAAAAATCTGAATATATGAA
CATGAGACTATGTTAGAACATGCACGGGATTATGCTAAAAAATTCTTGGAACTAAGCTGAACCTGTACTGTGAGAAATTT
GGCAGTGCCTTCTTGCTTCTCACATTTAT-TACTAAATATCTTGTTAATTGGCATTT--CAAATCTGCACAGCTTCATTC
TGTTCGTATTAACAATC-------------TATAATTTGAAGTTTCATGGTTATTTTATTTATGTGCATAGACTAATAGT
ACTTGGTATTTTCATGATTGTTAGTTGGTCCCCTCG------------------TTTATCCTTTTGGCTGCTCTATTTAG
TTGTGTTCCTTTTCTGGTAGCTGCAACTCTGGGAACAAATAGAAGTTGTGTTTTCTATACATCAAAGGTTAGTTCTGTGT
ACTCATAAAGCATGGTTTGTGTTTGACTTTCAGGTGGTGGAAATGTCTCTGTTCCACTATGGGAGAAGAAATTTTGCACC
GATGCTTGTTCTATCCCCTGGGGTAAGCTATGCGAAGCCAAGAAATTGATGTCATTGTACACAAACATTGTTGACTGGGA
TGATTCGGCTGCATTCGAGGCTTTCAAAGATGCAAAGGACCGTTTCTGTGCTGCATATCATGGTCAACCTTGTTACATCC
CATTGCCTGACCCAGACATGTACATTGATATGGTCAACCCAGATGAATATATCGATCCTGAGTTGGTTGCTGATCTGGAG
AGGTCACGGCGTCGTGCTCCCAGAAGGGACAGCACCGCCCCAAATGGCTGGGACTCCTTCATCTTCGCAGACAAGCCAGT
TCCGGCCACAGGATGGGGTGATGGGGAAACAACCAACACCATTGGCCAACAATGCTCTGTAAACTGGGATAATCATGTGG
---AACAGCTCGTTGAAGCAAATTGCAAGCAAAGCTCGGTGAACTGGGACAGTTACGTCAGTCAGCCTGCTGAAACATTT
GTTCAGCAAAGCTCAGGAAACTGGGACGCGTATGTGGAACAGCAAGGTCAGACAAGCGGCTGGGGGGCGCCGATCATTCC
CTGCACATCCAATTGGGGCATGAAT---GGTGACCCGTGGAACCATGACTATGGCTGGGGCTCTTCAGCTATTCAGACAG
ATTCATGGGGCGACCAGAAAGATAGCTACTATGTGCCTGACAGCCAGGCTCAGGGCAGCTCAGACGGGCACTGGAGAAGG
CGAAACAGCCAGTCGGGCAGGCGGAACAGCAGGAACAGAGACAGAGGGGGTCCCATCAGCTCAAAGGCCATGAAATCCAA
GTATCAGGCGGACGAGCACGGCGGCGCGAATAACGGGTGGAGGCACTGCCGGGTGAGAGATAACATGCAGTACTCTTATG
AGCAGCCTGGTTATGCTGCCAACCAGTCACTAGCAATGTGA---------------------------------------
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-----------------
>chr3B_1_TraesCS3B01G360400
GATCGCAAGTATTCCCTCAGTAAACTAATATAAAAGCGTTTAGAACACTACTTCAATGATCTAAACGCTCTTATATTACT
CTCTTCATTCCACAATGTAGTGCGTACACATTTTTCGAGATTTAAATTTGACCGTAAGTTTAACAAACGACACCGACCGC
GACAGGAGCAAAAATTATACCTCTAATAATATGAATTCAGTGGTATAACTTTTGCTCCCGTCGCAGTCGGTCTTGTTGGT
TAAATTTACGGTCAAATTTGGATCTTGAAAACGCGGACACACTATATTGTGTAATGGAGGGAGTAATTTACAGAAGGGGT
ATTATGATTGTACTCTACTCTGCTAGAGTTGGATCGATATTTTTCTCTTGCAACGCCAAAGTAATGTTACTCGCAAAAAA
AAAACGCCAAAGTA-ATGTTGCCGACATAGTTTTTC------TTTTTTCTTTTT--TGAGACATCCGACATTAGCCAAGT
TCAGACTGGAGACATGGGCAAAAGAGTCAGAC-------GGAGGACGAAATTTTAGATCGTGTCATATTTGGTCGGTTTT
GTCCGCGCGCTCGTGGCATACAACAGCCGTCTTCGTCTCTGACACGCATCCGAACCGGCAAAGCGCACACGCACACGAAT
TCCTTATTTTTAATCCA-CCCCCTCACCCTCCCGTCCCCTCCGGCCGCGAAACCAACGGCGGCACCCGCACCCAAACCGC
CTCGCCACCGCCCGCGCCTCGATCGCC-------TCCCCGCGGCCGCGTCGCTCTCGCCGCCCAATCGGCTCACCGCCGC
CGGCCCTAGCAGCCAGCTCGATCGAGCGCGCGCCGTTCGGGGCTCCCGGATCGCCTCCGCCCCTCGCTGCCAGGATTCCG
GCGCGCGGGGGCGGCCCGTCCAATCGACCGGTCCCCGAGGGCCGAGGGCGCCTCGCCGCGTGCCCCGGGGGTGGTATCTA
GGGCCGAGGGCGGAAAGCTCCCGGCTTGGCTAGCGGGGCGTCCCGGTTCTCCGGCGGTTCGTCCATGGCGGAGAGGCGGT
CCGGCTACAGGGACTGGGACA------GGGACAGGGCGGCGTCCGAGGCCGGCAGGTACTGGAGGCCGCCGCGTTCCCAG
GCTCACGGTGCGTTTCCTGATCCGTCCTCGTCTTGTTCGCAGCCTTGTCTGTTTCCGCGCTTGCCGTT-GGCTTGGAGGG
GTCGCGTCGTTTTCCCCTTTCCTTTCCTGAGTTGGAGATCTAGA---ATGCGCAGGGAGTAGGCCACACTCTCCCTTTCA
CGATCCGTGTGTTTCTGGCAGTGTCTAGACGCGGTAACTAACATTTTGGGTAAAATTCGGTCGGCAGGTGGGTAGTAAAA
TCATGCA---AGTAGTATGTGCCGACACTACAAGGAAAATAACGTGCGTGGATACTTATGCTGGTTTACTGCTTCCTTCG
TGGGTCTAATAATGCTTGTGCATTTGCTTGGCTTGAATTGATGAAAATATGAAGCATGTTCTAAGAAATCGCAGAGCTAA
TGTTTATGTGTATGGCCTCTGAGCTCACACATATACTATTTATTTATTATGCATATGCTGACGCTTATATTTGAACCTTT
AG-TAGTAATTTTGGTCTTGAATGTGAAACTGTGGAGTTTATCAAG----TTGATCATTACATGTTCAATGGAGCTCTGA
TCTTTCAGTGCCAATTGTTTACAAGAATTATCAGTGTGAATGTTCTTTGCAGTTTTACAAGAATGCTGATATGATATCAT
ATTTTGCTAAACAGGGAAATTAATGTTTCAGTAATACT------------------------------------------
------------------------------------------AAACGACTGCTCAACATTTTAAGCCTTGTAAAAATAGA
TAGGGGTCAACCCCTCATCTTCCCATTCAAGTGCTCTGCCAGTGCTCAAGTAAAGAGTTGAATAGGATGTTTCTGTGATT
ACAACATTGGATGGGTTCTTTGGAAGTTCCCTTTGTTTTTAATGAGCTATGC----------------------------
--------------------------------------------------------------------------------
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---------GATGTCCTAATGCCCTCATGTTTTTGGAAATTTTCTTTGTTGTGACATATCAAAAAATCTGAATATATGAA
CATGAGACTATGTTAGAACATGCACGGGATTATGCTAAAAAATTCTTGGAACTAAGCTGAACCTGTACTGTGAGAAATTT
GGCAGTGCCTTCTTGCTTCTCACATTTAT-TACTAAATATCTTGTTAATTGGCATTT--CAAATCTGCACAGCTTCATTC
TGTTCGTATTAACAATC-------------TATAATTTGAAGTTTCATGGTTATTTTATTTATGTGCATAGACTAATAGT
ACTTGGTATTTTCATGATTGTTAGTTGGTCCCCTCG------------------TTTATCCTTTTGGCTGCTCTATTTAG
TTGTGTTCCTTTTCTGGTAGCTGCAACTCTGGGAACAAATAGAAGTTGTGTTTTCTATACATCAAAGGTTAGTTCTGTGT
ACTCATAAAGCATGGTTTGTGTTTGACTTTCAGGTGGTGGAAATGTCTCTGTTCCACTATGGGAGAAGAAATTTTGCACC
GATGCTTGTTCTATCCCCTGGGGTAAGCTATGCGAAGCCAAGAAATTGATGTCATTGTACACAAACATTGTTGACTGGGA
TGATTCGGCTGCATTCGAGGCTTTCAAAGATGCAAAGGACCGTTTCTGTGCTGCATATCATGGTCAACCTTGTTACATCC
CATTGCCTGACCCAGACATGTACATTGATATGGTCAACCCAGATGAATATATCGATCCTGAGTTGGTTGCTGATCTGGAG
AGGTCACGGCGTCGTGCTCCCAGAAGGGACAGCACCGCCCCAAATGGCTGGGACTCCTTCATCTTCGCAGACAAGCCAGT
TCCGGCCACAGGATGGGGTGATGGGGAAACAACCAACACCATTGGCCAACAATGCTCTGTAAACTGGGATAATCATGTGG
---AACAGCTCGTTGAAGCAAATTGCAAGCAAAGCTCGGTGAACTGGGACAGTTACGTCAGTCAGCCTGCTGAAACATTT
GTTCAGCAAAGCTCAGGAAACTGGGACGCGTATGTGGAACAGCAAGGTCAGACAAGCGGCTGGGGGGCGCCGATCATTCC
CTGCACATCCAATTGGGGCATGAAT---GGTGACCCGTGGAACCATGACTATGGCTGGGGCTCTTCAGCTATTCAGACAG
ATTCATGGGGCGACCAGAAAGATAGCTACTATGTGCCTGACAGCCAGGCTCAGGGCAGCTCAGACGGGCACTGGAGAAGG
CGAAACAGCCAGTCGGGCAGGCGGAACAGCAGGAACAGAGACAGAGGGGGTCCCATCAGCTCAAAGGCCATGAAATCCAA
GTATCAGGCGGACGAGCACGGCGGCGCGAATAACGGGTGGAGGCACTGCCGGGTGAGAGATAACATGCAGTACTCTTATG
AGCAGCCTGGTTATGCTGCCAACCAGTCACTAGCAATGTGAGAAGGATGATGAAGACCATTTGGCCGCTTTGGAGGTGCC
ATTTTGCGTTGGTAAATGTGGAAGGACCCCTGTAGGTTATGTGACGTTCCTGTAGATAGCAACGGTTTTGTCACAGCGAT
TTGCGCATTCTGTACATATGTTTTGAGCCTAGTTGTTCTGTTTACTGGCTGTATTGCAGCGCCGGCGTTGTCAACTCTTA
ATTTCAGCGTGTTTTATCGCTCCGAATCG----------------CTTATAAACAGCAATCTCTTATATGTTCTAATAAG
AGATTAATTACTAGAAATTTGATTGCATGCACATTTCAAGATACTTTTTTATGTGCATAAGGCCTGTTTGGTTCATAAGT
CCTAGGACTTTTTCTAGTCATAACTAAAAGTTCATAGTCAAGTCCTTCTTTGTTTGTTTTCAGGGACTAAAAAGCCCGTA
GTCCCTCCCTAGAGGTTATTAAATGACCATGTTGTCCCTAGTATACAGAAAAATAACAACCAAACAACATCATGGGACGG
CGGGGCAATAGGTGCAGGGAGGGGCATTGATGGAAAAGTCCTAAAAAGTCCCAAAAAGCCTCCCCTTGAGAGTCTTCTTC
ATTTATAGTTCCAAAAAGCAACTTTTAGGCCATAGTAGTCCCTCCTGTATGGTTAAAAAGTCTTTAAGAGGGGACTTTTT
CTAGTCCCTACACCAAAAAGTCCCTGGAAACAAACACCCCAAAGTTAGGTTTAAACAACTTTGTTACACTCAGAGCATCT
ATCGTTGTGCGCCTCAGGACATTGGCCAATGCATAGCCCCAGGATGATGCCTCGCATGCCATGTAGGATCGAATGTAGAT
GTTTGGGGAGAAATGTATGATCCGGTGTAGAAATGCGCCTCAAGACATTGGCCAGTGCATAGCCCCAGGATGATGCCTCG
CATGCCATGTAGGATCGGATGTAGATATTTAGGGAGAAATGTATGATCCGGTGTAGAAAGCTGAAAAGGTTGAAGTGGAG
AGTATAGATGCATGTGT
>chr3A_360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTTTTCTCTTGCAACGCCAAAGTAATGTT------------
--------------------GCCGACGTAGTTTTTC------TTTTTTCTTTTTGATGAGACATCCGACAT-AGCCAAGT
TGAGACTAGAGACATGGGCAAAAGAGTCAGAGT------GGAGTACGAAATTTTAGACCGTGTCATATTTGGTCGGTTTT
GTCCGCGCGCTCGTGGCATACAACACCCGTCTTCGTCTCTGACACGCATCCGAACCGGCAAAGCGCACACGCACACGAAT
TCCTTATTTCTAATCCG-CCCCCTCACCCTCCCGTCCCCTCCGGCCGCGAAACCAACGGCGGCACCCGCACCCAAACCGC
CCCGCCACCGCCCGCATCTCGATCGCCTCCCCGGTCCCCGCGGCCGCGTCGCTCTCGCCGCCCAATCGGCTCACCACCGC
CGGCCCTAGCATCCAGCTCGATCGAGCGCGCGCCGTTCGGGGCTCCCGGATCGCCTCCGCCCCTCGCTGCCACGATTCCG
GCGCGCGGGGGCGGCCCGTCCAATCGACGGGTCCCCGAGGGCCGAGGGCGCCTCGCCGCGTGCCCCGGTGGTGGTATCTA
GGGCCGAGGGCGGAAAGCTCCCGGCTTGGCGAGCGGGGCGTCCCGGTTCTCCGGCGGTTCGTCCATGGCGGAGAGGCGGT
CCGGCTACAGGGACTGGGACA------GGG------CGGCGGCCGAGGCCGGCAGGTGCTGGAGGCCTCCGCGTTCCCAG
GCTCACGGTGCGTCTCCTGATCCGTCCTCGTCTTGTTCGCAGCCTTGTCTGTTTCCGCGCTTGCCGTTTGGCTTGGAGGG
GTCGCGTCGTTTTCCCCTTTCCTTTCCTGAGTTGGAAATCTAGAAGAATGCGCAGGGAGTAGGCTACACTCTCCCTTTCA
CGATCCGTGTCTTCCTTGCAGTGTCGAGACGCGGTAACTGACATTTTGGGTAAAATTCGGTCGGCATGTGGGTAGTAACA
TCATGCAAGTAGTAGTATGCGCCGACACTGCAAGGAAAATGACGTGCGTGGATACTTATGCTGGTTTACTGCTTGCTTCA
TGGGTCTAATGATGCTTGTGCATTTGCTTAGCTTGGATTGATGAAAATATGAATCCGCATCTAAGAAATTGTAGAGCTAA
TGTTTAACAAATGTTTATGCGTCAACTATTTGTTTG-------------------TGTTTAGGCGTATATTTGAACCCCT
AGTTAGTAACTTTGGTCTGCATTGTGAAACTGTCGAGTTTAACACATCGCTTGATCATTACATGTTCAACGGAGCTCTGA
TCTTTCAATGCGAATTGTTTAGAAGAATTATCTGTGTGAGTGTTCTTTGCAGTTTTGCAAGAATGCTGATATGATATCAT
ATTTTGCTAAACAGGAGAATT-ATGTTTCAGTGATACT------------------------------------------
------------------------------------------AAT-GACTGCTCAACATTTTAAGTCTTGTAAAAATAGA
TAGGGTTCAACCACTCATCATCCCATTCAAGTGCTCTGCCAGTGCTCAAGTAAAGAGTTTAATATGATGTTTCTGTG--T
ACAACACTGGATGAGCTCTTTGGAAGTTCTCTTTGTTTGTAATGAGTTATTTGGTATCCTATAAGGGCATCTACAATGCC
GGGCGCTAGGCCTGGACGATAGGATAAATATCCTGTCCGATCGGCAGTTAGACTACAAAATCCTAGCGTCTAACCTGGTA
GCGACGCAAAAGCTGGAGGCGGGCGCTTTGCCTTTTTTCCCCACAGCCATGCATGTAGCGATTGGTTTTTCTACTAGTTC
TGCGATTAATTAGCACCCCTCATTAGCGCTTGCCGTTGGGTCAGAAAACGCTAAGCTTCTTTCCTATTTTCTGAGAATTA
TCTTTTTATTCATAAGCGTCTACGTAGGCGCCCAGCAATGGAGATGCCCTAAGGGCATCTACAACGCCAGGCGCTAGGCC
AGGGCGCTAGGATAAATATCCTGCTTGATCGGCAGTTAGACTACAAAATCCTAGCGTCTACCCTGGCAGCTACGCAAAAG
CTGGAGGCGGGCGCTTTGCCTTATTTTTCCGCAGCCATGCATGTAGCAATCGGTTTTTCTGCTAGTTCTGTGATTAATTA
GCCTACCCCAACTTGTTTGGGACTAAAGGCTTTGTTGTTTTTGTCTGCGATTAATTAGCACCCCTCGTTAGCGCTTGCCG
TTGGGTTAGAAAGCGCTAAGCTTCTTTCTTATTTTATATGCCCTACGCA-------------------------------
---AATGAAGATGCCCTAATCCCCTCATGTTTTTGGAATTTGTCTTTCCTGCGACATACTGAAATTTCTGAATATATGAA
CATGAGACTATGTTAGAACATGCACGGG---ATGCTAAAAAGTTCTTGCAACTAAGCTGAACCTGCTCTGTGAGAAATTT
GGCAGTGCCTTCTCGCTTCTCACATTTTAGTACTAAATATCTTGTTAATTGACATTTTCCAAACTTGCACAGCTTCATGC
CCTTCTATCAACATTTATAAGTTCAACATTTATAAGTTAAAGCACCATGGTTACTTTATTTGTGTGCATAAAC---TACT
ACTTTGTATTTTCATCATTGTTAGTTGGTCCC---TTATCCTTTTGGCTGCTCATTTATAATTTTAGCTGCTCTATTTCG
TTGTGTTCCTTTTCTGATCAGTGTTCTTT--GGAACAAATAGAAGTTGTGTTTTCTATACATCAGAGATTAGTTCCTTGT
ACTCATAAAGCATGGTTTGTGTTTGACTTTCAGGTGGTGGAAATGTGTCTGTTCCACTATGGGAGAAGAAATTTTGCATT
GATGCTTGTTCTATACCCTGGGGTAAGCTATGTGAGGCCAAGAAACTGATGTCATTGTACACGAATATTGTTGACTGGGA
TGATTCAGGTGCATTCGAGGCTTTCAAAGATGCCAAGGACCGTTTCTGTGCTGCATATCATGGTCAACCTTGTTACATCC
CATTGCCTGACCCAGACATGTACATTGATGTGGTCAACCCAGATGAATATATCGATCCTGAGTTGGTTGCTGATCTGGAG
AGGTCACGGCGCCGTGCTCCTAGAAGGGACAACACCGCCCCAGATTGCTGGGACTCCTTCATTTTTGCAGACAAGCCAGT
TCCAGCCACGGGATGGGGTGATGGGGACACAACCAACACTATCGGTCAGCAATGCTCTGTGAACTGGGATAATCATGTGG
AACAACAGCTCCTTGAAGCAAATTGCAAGCAAAGCTCGGGGAACTGGGACAGTTATGTCAGTCAGCCTGCTGAAACATTT
GTTCAGCAAAGCTCAGGAAACTGGGACACTTATGTGGAACAGCAAGGTCAGACAAGCGGCTGGGCGGCGCCGATCATGCC
CTGCACATCCAATTGGGGCATGAATAGTGGTGACCCATGGAACCATGACTATGGCTGGGGCTCCCCAGCTATTCAGACAG
ATTCATGGGGCGACCAGAAAGATAGCTACTGTGTGTCTGACAACCAGGCTCAGGGCAGCTCAGACGGGCACTGGAGACGG
CGAAACAGCCAGTCGGGCAGGCGGAACAGCAGGAACAGAGACCGAGGGGGTCCCATCAGCTCAAAGGCCATGAAATCCAA
GTACCAGGCCGACGAGCATGGCGGCGCGAATAATGGCTGGAGGCACTGCCGAGTGAGAGATGGCATGCAGTACTCTTATG
AGCAGCCTGGTTATT---CCAACCAGTCACTGGCAATGTGAGAAGGATGATGAAGACCATTTGGCCGTTTTGGAGGTGCC
ATTTTGCGTTGGTAAATGCGGAAGGACCCCTGTAGGTTATGTGACGTTCTTGTAGATAGTAACTGTTTTGTCACAGTGAT
TTGCGCCTTGTGTACATATGTTTTGAGCCTA---GTTCTGTTTACTGGCTGTATTGCAGCACCGGCGTTGTCAACTCTTA
ATTTCAGCGTGTTTTATCGCTCCGAATC----------TAATACTCTTATAAACAACAATCTCTTGTA------------
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-----------------
>chr3D_403
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--AACGCCAAAGTATATGTTGCCGACATAGTTTTTCGTTCCTTTTCTTTTTCTTTTTGAGACACCCGACAT-AGCTAAGT
TCAGACTGGAGACATGGGCAAAAGAGTCAGACTGGAGTAGGAGTACGAAATTTTAGAGCGTGTCATATTTGGTCGGTTTT
GTCCGCGCGCTCGTGGCATACAACAGCCGTCTTCGTCTCTGACACGCATCCGAACCGGCAAAGCGCACACGCACACGAAT
TCCTTATTTTTAATCCGTCCCCCTCACCCTCCCGTCCCCTCCGGCCGCGAAACCAACGGCGGCACCCGCACCCAAACCGC
CTCGCCACCGCCCGCGCCTCGATCGCC-------TCCCCGCGGCCTCGTCGCTCTCGCCGCCCAATCGGCTCAC---CGC
CTGCCCCAGCAGCCAGCTCGATCGAGCGCGCGCCGCTCGGGGCTCCCGGATCGCCTCCGCCCCTCGCTGCCACGATTCCG
GCGCGCGGGGGCGGCCCGTCCAATCGACCGGTCCCCG------------------------------------------A
GGGCCGAGGGCGGAAAGCTCCCGGCTTGGCGAGCGGGGCGTCCCGGTTCTCCGGCGGTTCGTCCATGGCGGAGAGGCGGT
CCAGCTACAGGGACGGGGACAGGGAGAGGG------CGGCGGCCGAGGCCGGCAGGTACTGGAGGCCGCCGCGCTCCCAG
GCTCACGGTGCGTCTCCTGATCCGTCCTCGTCTTGTTCGCAACCTTGTCTGTTTCCGCGCTTGCCG-TTGGCTTGGAGGG
GTCGCGTCGTTTTCCCCTTTCCTTTCCTGAGTTGGAAATCTAGA---ATGCGCAGGGAGTAGGCTACACTCTCCCTTTCA
CGATCCGTGTCTTCCTGCCAGTGTCGAGACGCGGTAACTGACATTTTGGGTAAAATTGGGTCGGCAGGTGGGTAGTAACA
TCATGCAAC---TAGTATGTGCCGACACTGCAAGGAAAATGACGTGCGTGGATACTTATGCTGGTTTACTGCTTGCTTCG
TGGGTCTAATAATGCTTGTGCATTTGCTTAGCTTGGGTTGATGAAAATATGAATCTTGTTCTAGGAAATTGTAGAGCTAA
TGTTTAACAAATGTTTATGTGTCATCTATTTGTTTC-------------------TGTTTACGCGTATATTTGAACCCCT
AGTTAGTAACGTTGGTCTCCAGTGTGAAACTCTCGAGTTTAACA---CGCTTGATCATTACATGTCCAACGGATCTCTGA
TCTTTAAATGCCAACTGTTGAGAAGAATTATCTGTGTGAGTGTTCTTTGCAGTTTTACAAGAATGCTGATATGATATCAT
ATTTTGCTAAACAGGGAAATT-ATGTTTCAGTAATACTCCCTCTGTAAAGAAATATAAGAGCATTTAGATCACTAAAGTA
GTGATCTAAACGCTCTTATATTTCTTTACGGAGGGAGTACTGAAT-GACTGCTCAACATTTTAAGTCTTGTAAAAATAGA
TAGGGATCAACCACTCATCGTCCCATTCAAGTGTTCTGCCAGTGCTCAAGTAAAGAGTTTAATATGATGTTTCTGTG--T
ATAACACTGGATGAGCTCTTTGGAATTTCTCTTTGTTTGTAATGAGTTATTTGGTATCCTA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGGGCATCTACAACACCAGGCGCTAGG--
-----------ATAAATATCCTGCTCGATCGACAGTTAGACTACAAAATCCTAGCGTCTAACCTGGCAGCTACGCAAAAG
CTGGAGGTGGGCGCTTTGCCTTATTTTCCCGCAGCCATGCATTTAGCAATCGGTTTTTCTGCTAGTTCTGCGATTAATTA
GCCTACCCCAACTTGTTTGGGACTAAAGGCTT--TTGTTTTCGTCTGTGATTAATTAGCACTCCTCGTTAGCGCTTGCTG
TTGGGTTAGAAAGCGATAAGCTTCTTTCTTATTTTATGGTAATTATTATTTTTTATTCATAAGCGTCTATGCAGGCGCCC
GGCAATGAAGATGCCCTAATCCCGTCATGTTTTTGGAATTTGTCTTTCCTGCGACATATTGAAATTTCTGAATATATGAA
CATGAGACTATGTTAGAACATGCATGGG---ATGCTAAAAAGTTCTTGCAACTAAGCTGAACCTGTACTGTGAGAAATTT
GGCAGTGCCTTCTCGCTTCTCACATTTTAGTACTAAATATCTTGTTAACTGACATTTTCCAAACTTGCACAGCTTCATGC
CCTTCTATCAACATTTATAAGC---------------TAAAGCACCATGGTTACTTTATTTATGTGCATAAAC---TACT
ACTTGGTATTTTCATCATTGTTAGTTGGTCCCCTGTTATCCTTTTGGCTGCTCATTTATACTTTTAGCTGCTCTATTTCG
TTGTGTTCCTTTTCTGATCAGTGTTCTTT--GGGACAAATAGAAGTTGTGTTTTCTATACATCAGAGATTAGTTCCTTGT
ACTCATAAAGCATGGTTTGTGTTTGACTTTCAGGTGGTGGAAATGTGTCTGTTCCACTATGGGAGAAGAAATTTTGCATT
GATGCTTGCTCTATCCCCTGGGGTAAGCTATGTGAGGCCAAGAAACTGATGTCATTGTACATGAATATTGTTGACTGGGA
TGATTCAGGTGCATTCGAGGCTTTCAAAGATGCCAAGGACCGTTTCTGTGCTGCATATCATGGTCAACCTTGTTACATCC
CATTGCCTGACCCAGACATGTACATTGATGTGGTCAACCCAGATGAATATATAGATCCTGAGTTGGTTGCTGATCTGGAG
AGGTCACGGCGCCGTGCTCCTAGAAGGGACAACACCGCCCCAGATGGCTGGGACTCCTTCATTTTTGCAGACAAGCCAGT
TCCAGCCACGGGATGGGGTGATGGGGACACAACCAACACTATCGGTCAGCAATGCTCTGTGAACTGGGATAATCATGTGG
AACAACAGCTCCTTGAAGCAAATTGCAAGCAAAGCTCAGGGAACTGGGACAGTTATGTCAGTCGGCCTGCTGAAACATTT
GTTCAGCAAAGCTCTGGAAACTGGGACACGTATGTGGAACAGCAAGGTCAGACAAGCGCCTGGGGGGCACCAATCATTCC
CTGCACATCCAATTGGGGCATGAA---TGGTGACCCATGGAACCATGACTATGGCTGGGGCTCCCCAGCTATTCAGACAG
ATTCATGGGGCGACCAGAAAGATAGCTACTGTGTGTCTGACAGCCAGGCTCAGGGCAACTCAGACGGGCACTGGAGACGG
CGAAACAGCCAGTCGGGCAGGCGGAACAGCAGGAACAGAGACCGAGGGGGTCCCATCAGCTCAAAGGCCATGAAATCCAA
GTACCAGGCCGACGAGCATGGCGGCGCGAATAACGGCTGGAGGCACTGCCGGGTGAGAGATAACATGCAGTACTCTTATG
AGCAGCCTGGTTATGCCGCAAACCAGTCACTGGCAATGTGAGAAGGGTGATGAAGACCATTTGGCCGCTTTGGAGGTGCC
ATTTTGCGTTGGTAAATGTGGAAGGACCCCTGTAGGTTACGTGACGTTCCTGTAGATAGTAACGGTTTTGTCACAGCTAT
TCGCGCCTTGTGTACATAAGTTTTGAGCCTAGTTGTTCTGTTTACTGGCTGTATTGCAGCGCCGGCGTTGTCAACTCTTA
ATTTCAGCGTGTTTTATCGCTCCGAATCGGGTCCGATTTACTACTCTTATAAACAACAATCTCTTATATGTAT---TAAG
AGATTAATTACCGTGAATTTGATCG-ATGCATATTTCAAGATACTTGTTTTATGTGCACAA-------------------
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-----------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------SSSSSSSSSSSS
SS---------------------------------------------------------------------S--------
-------------------------------------------S-------------S----------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------------------------------------------------S-------
--------------------------------------------------------------------S-----------
------------------------------S-------------------------------------------------
------------------------------SSSSSS-----S--------------------------------------
-------------S------------------------------------------------------------------
------------------------------------S---------------------------S---------------
----------S--S-----------S-------------S--------------------------------------S-
-----------------------------S----------S---------------------------------S-----
-----------------------------S-----S-----------------S-S-------------S-S--------
------SSSSSSSSSSS-S--SSS--SSSSSSS-S-SSSSSSSSSSSSSSSSSSS--S-S----S------------SS-
---------S--------SS-S-----------S-------S--SS-----------------------S----------
-------S-------------S----------S------S----------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------SS-------------------S--------------
-----S------S------S---------------------------------------S----S------------SS-
------S------S-S-------------S--------S-------S---SS----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------S------S-----------------S--S-----SS--S-------SS---SS--------------
----------------------------SSS----------S------S-------------------------------
-------------S-------------SS----------------------S-----------SS-------------S-
SS---SSSSS-SSSS-S------------------S--S---SSS--------S----------------S--SSS--S-
---------------S------------------SS-----------------------S-----S------------S-
----------------S-SSS--SSSS-SSS---------------------------------S--S-------SS---
----------------------------------------------S-------------------------------SS
--------------------------------S--S---------S----------------S--S--------------
------S-S------------------------S----------------------------------------------
-----------------------------S--------------------------------------------------
-----------S--------S----------S----------S-------------------S--S--------------
---S-----S-----------------S-----------S--S--S--S-----------S-------------------
-----------S---------------------------S---------------S------------------------
---------------------------S----------------------------------------------------
------------------------------------S--------------------------SS---------------
------------------------------S----S-----------------------------------------S--
------------------------------------------S-------------------------------------
---S-----S--------S-----------------S-------------------------------------------
----------------S--------------S------------------------------------------------
-----------------------------------------------------------S--------------------
------S--S----------------------------------------------------------------------
-------------------------------------------------------S---------------SSSSS----
-----------SSSS--------S-S-----S--------------S---SSSSSSSSS-SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_176
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCGC
GACAGGAGCAAAAATT----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_1134
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------TTCCTGATCCGTCCTCGTCT-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_225
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---------------------------------------------TAACTTTTGCTCCCGTCGCA---------------
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-----------------
>reverse_2051
--------------------------------------------------------------------------------
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--------------------------------------------------GCGATGTCCTAATGCCCTCA----------
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-----------------
>forward_1359
--------------------------------------------------------------------------------
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-----------------------------------------------------------GTCGGCAGGTGGGTAGTAAA-
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>reverse_3139
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------------------AGCTGCAACTCTGGGAACAA------------------------------------------
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>forward_1476
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----------------TGTGCATTTGCTTGGCTTGA--------------------------------------------
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>reverse_3788
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---------------------------GCGTATGTGGAACAGCAAGG---------------------------------
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-----------------
>forward_3649
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-----------------------------CAACCAACACCATTGGCCAA-------------------------------
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>reverse_4737
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----------------GGGAGGGGCATTGATGGAAA--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
