>input_sequence_33939
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-----------------------------------------------ATGAAGCTTGACAGGGAGATGGAGATGCTCCTC
AACGAGATCCCTCTCCTCCTCCACGGCGACGTCATCGGCTGCGGCGAGCCAGCCGCCGCGGAGACCGACACCGACGCCGT
CGACTTCTCTTACCTCATTCAAGAACTCGGCGAGATGGGGTTCGTCGAGGACGA------------CGACGATGACGACG
ACAACGGTTTCCTTCACCCCAGGAAGGCCAGCTCATCCCCGACGAGCAACCTCCATTTCATGGACGCCGAGAATTTCGTG
GCGTCGCGTCCCTTCTCCATGGACAAAGACCGCGAGAGGGCTCTGTTCGATCCGTTCCCCTTCTCCAGCACCTGCTTCGA
CGCCGCCGTGGACGACGACTGGGACCTCCTGTGTCCGCCGGCGAGGTCCCGGCTGTGCAAGACGGCGAGGCCGAAGAAGG
GTACCTGCAG------CAATGGCTGCCAGGCGACGAGCCCCAAGATGTGCGCGGCGGCGAAGCCGTCCAAGTACGAGAGC
CTTGTCGGGCTGCGCGGGTACATGTACCACGTGGCCAGGGACCAGCACGGCTGCCGGTTTCTCCAGCAGCGGCTCGACGA
CGGCAAGCGCGAGGTCGATTTCATCTTCACCGGCGTCGCCCGTCACGCCGTGGACCTCATGGTGAACCCGTTCGGGAACT
ACCTCATGCAGAAGCTGTTAGCCGTCTGCAGCGAGGAGCAGAGGATGGGCATCGTGCTCACCCTCACAAAGGACCCCTTC
GTGCTCGTCAGGATCTCTCTCAATGTACATGGGTAAGCACCATGTTTTTAAC--------------------TTTGTTCC
TGCTAATTGTTTTTTGTTGCTCTTTTCGAATGAAATGTTTTTTGTTGCTAAATGTTGTGTCGTTTCTCGTTTTCAGGACA
AGGGCAGTACAGAAACTGATTGAAAGCTTGAGGGCAAGGGAGGAGATCCAGCTGGTCGTCGCAGCTCTGCGCCCCGGGTT
CCTGGAGCTCATAAAGGATCCTAATGGTAATCATGTCGTGCAGAAGTGCTTGCAATCGTTCGGGGCTGATGATAACAAGG
TATACATGTGTGTGTGTACATGCATCTTAACAAGTTCTGAATATATTGTAGATGAGTTAGTATTTTTATTTAGGTGTAAG
TTAGTCTATTTGGGTCCAGAGAAGTTGTTCCAATCTAGTTACTCTGATCGCTTCAGAAAAGTTTGTAGTAGACCACTTCC
ACTTGTCTGAATTTTGCAGCTTGTACTGTTAATTGTCAATTATTGACCTGAATTTTCGGCAAAAAATTTAGTGAATTGAA
TTTTGATTTTACTAAACTGATATGTTCCTGGTCAGACATAATTAACTCACAATCTACAACTTTCAGCCCATCTTCGATGC
TGCTGCTGTTTATTGCCTTGATATCGGGATGCAATGCCATGGCTGCTGCGTCCTGCAGCGGTGTATTGCGCGTTCCACGG
GTGAGCACAAGGAGAAGCTGGTTGCCGCAATCGCTCGCAATGGGTTCGAACTTGCACAAGATGCCTATGGGTAAAAATCC
TGCCTTGTGCTCCACCTGTAATTTTTCATGTAACCACGAGGCCGGTAAAACAAGCATGGTTAATCAATTA----------
-----------------------------------------TTGTTCTGTCTAGCATATCATTAGTAGGCCAGCCGGCAG
CATGCCTTTGT-AAAGTGGAGACCATTGATTGTAGAGACCTCTGTATTTCTGTAGACATTCCTACAAATCTTTAGTGCCA
TGATATCTAGTTAAACATTTTTTTTTGAACATAACTAGTTAAACATTTATACACATTAAAGAAAAAGAATGCATTCAACA
AGTTTTACCCTGTATGTTCATAATTTATTCTTCTA---------------------------------------------
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----------------TATGTTTATGTTGGTGTATTTTAACTTGTAAACTCATGAGCTTATCTGCTAATGTTGCAGAAAC
TATGTTGTTCAGTATGTGATAGAGCTAAAGGTCGCTACTGCAAATGCAAGTCTGGCACAGCAGTTTGAAGGCAAGTACAT
CCACCTCTCCATGCAGAAGTTCAGTAGCAACGTTGTCGAGAAATGCCTGAAAGTTTTCAAGGAAGCCGACAAAACCAACA
TCATCCTGGAGCTCCTTTCTGCGCCACAGTTCGAGCGGTTGCTTCTGCACCCTTACGCAAACTATGTGGTCTACGCAGCA
CTTCAGAATTCGAAGGTAAATAACATCTCAACCAATACAGAGTCAACCAGAGACC-------------------------
------GCAGTGTGTTGACAATATGTCTATGCTTGCGTTCTACTGAGCCATTTTGTTGA---------------------
-TGTGACTGCGACGAATTTTTCAGGGGTCTCTCCACTCAGCACTGACCAACGCCATCCGGCCTCATGTGGAACTACTCAG
AACCAGCCCATACTGCAAGAGGATCTACTCTCGAGCTTTGCTGAAGAAGTGA----------------------------
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>chr5B_1_TraesCS5B01G113800
AGTGAGTAAATATTAAAGTTTTGCAGTTCATAAAAGAAGGTTGACGCCGCTCTAGTGTTTAGCGTTAAACATGTTTACCA
CTAGACACGTTTAGCATCCTCTAGTAATTAATATCAATGTCTGTATTAATTAAGTAATCATATCATACGTAATACTAACA
CACACTTTATATATTGTATAATATTAATGTGCAACATAAGAATTATCTTTTCTAATATTAATGTCTACCGTCACTATTTT
GGGCGTGTGGAGGTGTGTCTTTGGCGCATCTATGTTTGGTGGATTTGCTCGGATAACGTTGTTGTTCGTCTACATTCGTG
TGTCTTCGAGTCGGATCCTTCTGATATACGTTATTCTTCATCTGCGACGGTTGTTGTTCGGTA-CGCTGGTCCTACA-GG
CCTTAGCACGACGACTTCCCGACTGACTACTACAACAAGTTGTGCTCGACTCCGGCGATGGAGGGGCGATGACGGTGGCG
CGCCTTCAGCCTGCTTCAGTGCTTGTAGTCGTCGTTAGATGGTTTACGGATCTGGATGTAATTTTTATTATTTCTGGTAT
TCGTTGTACTGCCATGATTGAAAATGAATAGATTGAAAATTTTCTCGCGGAAAAAGAAACTAAGTGGTACAGAGCTTTGT
GGCATGGTCGGAAAACATAATGTTTTTTAGGGTCTAAATGAAGACCTCTGATGTCAAAGTAGAAAATCGGAAAGTGCTTA
CCCCAAAACAAGAAAATCAGACTAGGTAATAACCTTTCAAAAATAT-ATTTT----AAAAAAGCACTCCTCTCACCGGCA
TCAGTCCTCACTACTTTCGCGCTATCCTTCTTGTATAAAACCACCCCCTCTGCTCTCTCTCCTCCTCCCACTCCTGCATG
CCTCAACGAACCATCTCCAAGAAAACACCTCACCCCAATCCAACCCCAAACCAATCCTCTCCACAAACCAATCTAACACA
ATTCCCCCACTGATTTTCTCATCGAGATTCGATCAGAGCAGTTGGAGATGAAGCTTGACAGGGAGATGGAGATGCTCCTC
AACGAGATCCCTCTCCTCCTCCACGGCGACGTCATCGGCTGCGGCGAGCCAGCCGCCGCGGAGACCGACACCGACGCCGT
CGACTTCTCTTACCTCATTCAAGAACTCGGCGAGATGGGGTTCGTCGAGGACGACGACGATGACGACGAC----------
--AACGGTTTCCTTCACCCCAGGAAGGCCAGCTCATCCCCGACGAGCAACCTCCATTTCATGGACGCCGAGAATTTCGTG
GCGTCGCGTCCCTTCTCCATGGACAAAGACCGCGAGAGGGCTCTGTTCGATCCGTTCCCCTTCTCCAGCACCTGCTTCGA
CGCCGCCGTGGACGACGACTGGGACCTCCTGTGTCCGCCGGCGAGGTCCCGGCTGTGCAAGACGGCGAGGCCGAAGAAGG
GTACCTGCAG------CAATGGCTGCCAGGCGACGAGCCCCAAGATGTGCGCGGCGGCGAAGCCGTCCAAGTACGAGAGC
CTTGTCGGGCTGCGCGGGTACATGTACCACGTGGCCAGGGACCAGCACGGCTGCCGGTTTCTCCAGCAGCGGCTCGACGA
CGGCAAGCGCGAGGTCGATTTCATCTTCACCGGCGTCGCCCGTCACGCCGTGGACCTCATGGTGAACCCGTTCGGGAACT
ACCTCATGCAGAAGCTGTTAGCCGTCTGCAGCGAGGAGCAGAGGATGGGCATCGTGCTCACCCTCACAAAGGACCCCTTC
GTGCTCGTCAGGATCTCTCTCAATGTACATGGGTAAGCACCATGTTTTTAAC--------------------TTTGTTCC
TGCTAATTGTTTTTTGTTGCTCTTTTCGAATGAAATGTTTTTTGTTGCTAAATGTTGTGTCGTTTCTCGTTTTCAGGACA
AGGGCAGTACAGAAACTGATTGAAAGCTTGAGGGCAAGGGAGGAGATCCAGCTGGTCGTCGCAGCTCTGCGCCCCGGGTT
CCTGGAGCTCATAAAGGATCCTAATGGTAATCATGTCGTGCAGAAGTGCTTGCAATCGTTCGGGGCTGATGATAACAAGG
TATACATGTGTGTGTGTACATGCATCTTAACAAGTTCTGAATATATTGTAGATGAGTTAGTATTTTTATTTAGGTGTAAG
TTAGTCTATTTGGGTCCAGAGAAGTTGTTCCAATCTAGTTACTCTGATCGCTTCAGAAAAGTTTGTAGTAGACCACTTCC
ACTTGTCTGAATTTTGCAGCTTGTACTGTTAATTGTCAATTATTGACCTGAATTTTCGGCAAAAAATTTAGTGAATTGAA
TTTTGATTTTACTAAACTGATATGTTCCTGGTCAGACATAATTAACTCACAATCTACAACTTTCAGCCCATCTTCGATGC
TGCTGCTGTTTATTGCCTTGATATCGGGATGCAATGCCATGGCTGCTGCGTCCTGCAGCGGTGTATTGCGCGTTCCACGG
GTGAGCACAAGGAGAAGCTGGTTGCCGCAATCGCTCGCAATGGGTTCGAACTTGCACAAGATGCCTATGGGTAAAAATCC
TGCCTTGTGCTCCACCTGTAATTTTTCATGTAACCACGAGGCCGGTAAAACAAGCATGGTTAATCAATTA----------
-----------------------------------------TTGTTCTGTCTAGCATATCATTAGTAGGCCAGCCGGCAG
CATGCCTTTGT-AAAGTGGAGACCATTGATTGTAGAGACCTCTGTATTTCTGTAGACATTCCTACAAATCTTTAGTGCCA
TGATATCTAGTTAAACATTTTTTTTTGAACATAACTAGTTAAACATTTATACACATTAAAGAAAAAGAATGCATTCAACA
AGTTTTACCCTGTATGTTCATAATTTATTCTTCTA---------------------------------------------
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----------------TATGTTTATGTTGGTGTATTTTAACTTGTAAACTCATGAGCTTATCTGCTAATGTTGCAGAAAC
TATGTTGTTCAGTATGTGATAGAGCTAAAGGTCGCTACTGCAAATGCAAGTCTGGCACAGCAGTTTGAAGGCAAGTACAT
CCACCTCTCCATGCAGAAGTTCAGTAGCAACGTTGTCGAGAAATGCCTGAAAGTTTTCAAGGAAGCCGACAAAACCAACA
TCATCCTGGAGCTCCTTTCTGCGCCACAGTTCGAGCGGTTGCTTCTGCACCCTTACGCAAACTATGTGGTCTACGCAGCA
CTTCAGAATTCGAAGGTAAATAACATCTCAACCAATACAGAGTCAACCAGAGACC-------------------------
------GCAGTGTGTTGACAATATGTCTATGCTTGCGTTCTACTGAGCCATTTTGTTGA---------------------
-TGTGACTGCGACGAATTTTTCAGGGGTCTCTCCACTCAGCACTGACCAACGCCATCCGGCCTCATGTGGAACTACTCAG
AACCAGCCCATACTGCAAGAGGATCTACTCTCGAGCTTTGCTGAAGAAGTGATGGCCTGATGAAACCATCTCACCATGT-
-AACAATAAAGATTGTTTGTCTTGTGCTATTTTTTCAGATTCAAAAGGGATAAAAGTGATCTCACCATGTAGATTTTGTA
TAGATCAAAATTATTTGGTCATGTACTTCTAAGTGCACCTTTATTGGGTGCACTCTTCAGTTG-CATAATCCATCTGGAA
TGGTAAGTTCCGGTCGAACAAATCATCATATAGATGTTGATGCACGTACATAAGATTGGTGATGCTTCTTGTAACTTAAT
GTTTGAATTTTTACTTGCCCCTCAATTGCTCAACCGAATGCCAGAACATGAAGGCAAATAACTGATTTGCAGTCTATGGA
AAGTTATGTATGACTTTGTCATGATACATCTCAACATACTTTATTAAGTATCTGGACAAAGGAAATCACAATTAAAATGC
CATTATATTTAACACAACATGAACGGAGCGTGAACTTTCAAAGGCTTTTTTCCATCTTCTCTAATTAAAAAAA--AA-CA
GAAAAAACAGAGTTAGCTATGAGCCACCACAACAATTCAATATGTTTTGCCGTCCGATCACATAATTGGACGTTCTAGAT
CTTCCAATTGTCCCACAAG-------------------------------------------------------------
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-CGTCCCTACGTTATTTTCACCCTTCACGACATGCCCAACTTGAAAGGGCTGCTGCTCCCGCGTGTTGGCGTCAATTGGG
CCCTGAAACAGCCCAATTTGTATCTTACATCATCCTAGGCCCGGCTCGCACTTCCCCCTTCCATCCCCTCAAA-AAAAAA
ACTTCTCCCTTCCATGTCTCGATATAGGGACCCCTTAAAAAAATGTCTCGATATGGAGAAGAAGAAAAAGTCATCCTCAT
TCACCCTGGTACGTGTTTGCCACGGCAGCAATATAAGGTGGAACAGTCTGCCCTTTGCCCTTCCGCTTCTATCTTAATTT
AAGATTGAGAAACGCTTTGCATCAGGCGTCCGATCCCACGTTCGTGTCAGACCACATCCCTTCCATTGGATTTTGTGAAA
C
>chr5A_39
GGTTC--------------------------------------ACGCCACTCTAGTATTTAGCGTTAAACATGTTTACCA
CCAGACACGTTTAGCATCCTTCAGTAATTAATATCAATGTTAGTATTAACCAAGTAACTATATCATGCCTAATACTAACA
CACAATTTATATATTGTATAATATTAATGTGCAATACAAGAATTATCTTTTCTAGTATTAATGTCTACTGTCACTTTTTC
AAGTCAAAT-----------------------------------------------------------------------
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----------------------------------------------------------ACTAAGTGGTACAGAGCTTTCT
GGCATGGTCGAAAAACATAATGTTTTTCAGGGTCTAAATA------TCTGGTGTTAAAATAGAAAATCGGAAAGTGCTTA
CCCCAAAACAAGAAAATCAGACTAGGTAATAACCTTTCAAAAAAAAGATTTT----AAAAAAGCACTCCTCTCACCGGCA
TCAGTCCTCACTACTTTCGCGCTATCCTTCTTGTATAAAACCACCCCCTCTG--CTCTCTCCTCCTCCCACTCCTGCATG
CCTCAACGAACCATCTCCAAGAAAACACCTCACCCCAATCCAACCCCAAACCAATCCTCTCCACAAACCAATCTAATACA
ATTCCCCCACTGATTTTCTCATCGAGATTCGATCAGAGCAGTTGGAGATGAAGCTTGACAGGGAGATGGAGATGCTCCTC
AACGAGATCCCTCTCCTCCTCCACGGCGACGTCCTCGGCTGCGGCGAGCCAGCCGCCGCGGAGACCGACACCGACGCCGT
CGACTTCTCTTACCTCATCCAAGAACTCGGCGAGATGGGGTTCGTCGAGGACGA------------CGAC----------
--AACGGTTTCCTTTACCCCAGGAAGGCCAGCTCATCCCCGACGAGCAACCTCCATTTCATGGACGCCGAGAATTTCGTG
GCGTCGCGTCCCTTCTCCATGGACAAAGACCGCGAGAGGGCTCTGTTCGATCCGTTCCCCTTCTCCAGCACCTGCTTCGA
CGCCGCCGTTGGCGACGACTGGGACCTCCTGTGTCCGCGGGCGAGGTCCCGGCTGTGCAAGACGGCGAGGCCGAAGAAGG
GTACCTGCAG------CAACGGCTGCCAGGCGACGAGCCCCAAGAAGTGCGCGGCGGCGAAGTCGTCCAAGTACGAGAGC
CTTGTCGGGCTGCGCGGGTACATGTACCACGTGGCCAGGGACCAGCACGGCTGCCGGTTTCTCCAGCAGCGGCTCGACGA
CGGCAAGCGGGAGGTCGATTTCATCTTCACCGGCGTCGCCCGTCACGCCGTCGACCTCATGGTGAACCCATTCGGGAACT
ACCTCATGCAGAAGCTGCTAGCCGTCTGCAGCGAGGAGCAGAGGATGGGCATCGTTCTCACCCTCACAAAGGACCCCTTC
GTGCTCGTCAGGATCTCTCTCAATGTACATGGGTAAGCATCATGTTTTTAACTTTGTTGGTGATAATTGAACTTTGTTCC
TGCTAGTTGTTTTTTGTTGCTCTTTTCGAATGAAATGTTTTTTGTTGATAAATGTTGTGTCGTTTCTGGCTTTCAGGACA
AGGGCAGTACAAAAACTGATTGAAAGCTTGAGGGCAAGGGAGGAGATCCAGCTTGTCGTCGCAGCTCTGCGCCCCGGGTT
CCTGGAGCTCATAAAGGATCCTAATGGTAACCATGTCGTGCAGAAGTGCTTGCAATCGTTCGGGGCCGATGATAACAAGG
TATA-----GTGTGTGTGCATGCATCTTAACAAGTTCTGAATATATTGTAGACGAGTTAGTATTTTTATTTAGGTATAAG
TTAGTCTATTTGGGTCCAGAGAAGTTGTTCCAATCTAGTTACTCTGATCGCTTCAGAAAAGTTTGTACTAGACCACCTCC
ACTTGTCTGAATTTTGCAGCTTGTACTGTTAATTGTT--------ACCTGAATTTTCCGCAAACTTTTTAGTGAACTGAA
TTTAGATTTTACCAAACTGATATGTTCCTGATCAGACACAATTAACTCACAATCTACAACTTTCAGCCCATCTTCGATGC
TGCTGCTGTTTATTGCCTTGATATCGGGATGCAATGCCATGGCTGCTGCGTCCTGCAGCGGTGTATTGCGCGTTCGACGG
GTGAGCACAAGGAGAAGCTGGTTGCCGCAATCGCTCGCAATGGGTTCGAACTTGCACAAGATGCCTATGGGTAAAAATCC
TACCTTGAACTCCACCAGTAATTTTTCATGTAACCACGAGACCGGTAAAACAAGCATGATTAATCAATTA----------
-----------------------------------------TTGTTCTGTCTAGCATATCATTAGTAGGCCAGCCGGCAG
CATGCCTTTGT-AAAGTGGAAACCATTGATTGTAGAGACCTCTGTATTTCTGTAGACATTCCTACAAATCTTTAGTGCCA
TGATATCTAGTTAAACATTTT--TTTAAACATAACTAGTTAAATTTATACA--------------------CATTCAATA
AGTATTACTCGGTATGTTCATAATTCATTCTTCTA---------------------------------------------
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----------------TATGTTTATGTTGGTGTATTTTAACCTGTAAACTCATGAGCTTATCTGCTAATGTTGCAGAAAC
TATGTTGTTCAGTATGTGATAGAACTAAAGGTCGCTACTGCAAATGCAAGTCTGGCACAGCAGTTTGAAGGCAAGTACAT
CCACCTCTCCATGCAAAAGTTCAGCAGCAACGTCGTCGAGAAATGCCTGAAAGTTTTCAAGGAAGCCGACAAAGCCAACA
TCATCCTGGAGCTCCTTTCTGCGCCGCAGTTCGAGCGGTTGCTTCTGCACCCTTACGCAAACTATGTGGTCTACGCAGCA
CTTCAGAATTCCAAGGTACATAACATCTCAACCAAAACAGAGTCAACCAGAGACC-------------------------
------GCAGTGTGTTGACAATATGTCTATGCTTGCGCTCTACTGAGCCATTTTGTTGA---------------------
-TGTGACTGCGACGAATTTTTCAGGGGTCTCTCCACTCAGCACTGACCAACGCCATCCGGCCTCATGTGGAACTACTCAG
AACCAGCCCATACTGCAAGAGGATCTACTCTCGAGCTTTGCTGAAGAAGTGATGGCCTGATGAGACCATCTCACCATGTG
TAACAATAAAGATTGTTTGTCCTGTGCTATTTTCTCGGATTCAAAAGGGATAAAAGTGATCTCGCCATGTAGATTTTGTA
TAGATCAAAATTATTTGGTCGTGTACTTCTAAGTGCACCTTTATTGGGTGCACTCTTCCGTTGCCATAATCCATCTGGAA
TGGTAAGTTCCGGTTGAACAAATCATCATATAGATGTTGATGCACGTACATAAGATTGGTGATGCTTCTTGTAACTTAAT
GTTTGCATTTTTACTTGCCCTGCAATTACTCAACGGAATGCCAGAACATGAAGGCAAATAACTGATTTGCAGTCTAAGGA
AAGTTATGTGTGACTTTGTCATGATACATCTCAACATACTTTACTAAGTATCTGGGCAGAGGAAATCACAATTAAAATAC
CATTATAGTTAACACAACATGAACGGAGCATGAACTTTCAAACGC-TTTTTCCATCTTCTCTAATTAAAAAAA--ACCCA
GAAAAAACAGAGTTAGCTATGACCCACCACAACGATTCAATATGTTTCACCGTCCGATGACATAATTGGACATTCTAGAT
CTTCCAATTGTCCCACAGGCGGCAAACCCTATTTGACGCTCGTTAGCGTCAGAACGACGTGCTTTCACTGAGGCGAGCCT
CCTGTTGGGCCGGCCCACGTACGGGATTGGCGTTTGCTGTTTGATTCGTTCTTGCTGCTGCTTCCTTCTCTATTCTTGCT
GGTTTTTTTGGTTTTTCTTCTATGGTTTTTTGTATCCAGTTTTTTCACTGTTTTTGTCCGGTTTTCAGCTCTTTTGTTCC
GGTTTTTATATTTTTTTTCTCTCTTTTGGTTCCTTTCTCCTTTCATTTTTCTTTTATGTTTCCTTTTTTATTTCTGTTTC
TGTTTTCCTTCTCTTTATTGCGTATTATATAAAAGTCCACCGTGTATTACCAAAATCTTCATCGTACTAAGAAAATGTTC
ATATATTATGAAATAGTTGACCTTTGAATTTATAAAAATATTCATCATGTATTACAAAAATGTTCATCGTATATTATGAA
ATTATTCAACGTATATTAAAAAATGTTCAGTGTGTACTTAAAATTTGTTCATCGTACATTAAACAATTGTTCAACGCATA
CTACAAAATGTTCATTGTGTATTTAAAATTTGTTCACCATGCATTAAACAATTGTTCAACGCATACTACAAAAGTTCATT
TGTGTATTTGAAATTTGTTCAGTGTTTTCTTACAAAAAAGATTCACTATATTTTAAATTTTGTTCAATGTATATTATAAA
AAAATATTTTTTGGGGAAAAATGATTTGCCACTGTCTACTTTAAGACTTGCGCTGCACTAAAATCGTTGTAGGTCGTTTT
TAAAAAAAACGTTGTAGGTCGCTAGCTTGTCTGGCTACGCACGCTAGAATCCACCAGGAGGTCGGGAGTTCAATCCACGT
GTGTGCTTCCTTTTTTCCGCTCGACGCGTGATAATTAGGCCGGCCCGCACACGGGCGGTGTATAGGACCTCCCCCCACAA
CCGTCGCTACGTCATTTTCACCCGTCACGGCATGCCCAACTTGAAAGGGCTGCTGCTCCCGCGTGTTGGCGTCAATTGGG
CCCTGAAACAGCCCAA-TTGTATCTTACATCATCCCAGGCCCGGCTCGCACTTCTCCCTTCCATCCCCTAAAAGAAAAAA
ACTTCTCCCTTCCATGTCTCGATATAGAGACCCCTT-AAAAAATGTCTCGATATGGAGAAGAAGAAAAAGTCATCCTCAT
TCACCCTGGTTCGTGTTTCCCACGGCGGCAATATAAGGTGGAACAGTCTGCCCGTTGTCCTTCCACTTCTATCTTATAAT
TTAAGATT------------------------------------------------------------------------
-
>chr5D_40
-GTTC--------------------------------------ACGCCATTCTAGTGTTTAGCGTTAAACATGTTTACCA
CTAGACACGTTTAGCATCCTCCAGTAATTAATATCAATGTCAGTATTAACTAAGTAATTATATCATGCCTAATACTAACA
CACATTTTATATATTGTATAATATTAATGTGCAATACAAGAATTATTTTTTCTAAAATTAATGTGTACAGTCACTCTTTT
GGCCATGTGGAGGTTTGTTTTCAGCGGATCTATCTTTGGTAGGTTTGCTCGGATCTCGTCGTAGTTCGTCTACGTTTGTG
TGTCTTCGAGTTGGATCCTTCTGATCTACATTATT-TTCATCTGCTGCGGTTGCTGTTCTGTTGCGCTGGTCCTACGGGG
CCTTAGCACGACGACTTTTCGACTGTCTACTACAACAAATTGTGC-CGACTCTGGCGATGGAAGGGCGATGACGGCGGCG
CGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTCGCTAGGTGATCTACGGATCTTGATGTAATTTTTATTATTTTTTATAT
TCGTTGTACTGCCATGATTGAAGATGAATAGATCAGAAATTTTCTCTTAAAAAAATATGCTAAGTGGTACAGAGCTTTCG
GGCATGGTCGAAAAACATAATGTTTTTCAGGGTCTAAATGAATATCTGATA--TTAAAATAGAAAATCGGGAAGTGCTTA
CCCCAAAACAAGA-AATCAGACCAGGTAATAACCTTTCAAAAATAAAAGATTAAAAAAAAAAGCACTCCTCTCACCGGCA
TCAGTCCTCACTACTTTCGCGCTATCCTTCTTGTATAAAACCACCCCCTCTG--CTCTCTCCTCCTCCCACTCCTGCATG
CCTCAACGAACCATCTCCAAGAAAACACCTCACCCCAATCCAACCCCAAACCAATCCTCTCCACAAACCAATCTAACACA
ATTCCCCCACTTATTTTCTCATCGAGATTCGATCAGAGCAGTTGGCGATGAAGCTTGACAGGGAGATGGAGATGCTCCTC
AACGAGATCCCTCTCCTCCTCCACGGCGACGTCCTCGGCTGCGGCGAGCCAGCCGCCGCGGAGACCGACACCGATGCCGT
CGATTTCTCTTACCTCATCCAAGAACTCGGCGAGATGGGGTTCGTCGAGGACGA------------CGACGATGACGACG
ACAACGCTTTCCTTCACCCCAGGAAGGCCAGCTCATCCCCGACGAGCAACCTCCATTTCATGGACGCCGAGAATTTCGTG
GCGTCGCGTCCCTTCTCCATGGACAAAGACCGCGAGAGGGCTCTGTTCGATCCGTTCCCCTTCTCCAGCACCTGCTTCGA
CGCCGCCGTGGGCGACGACTGGGACCTCCTGTGTCCGCCGGCGAGGTCCCGGCTGTGCAAGACGGCGAGGCCGAAGAAGG
GTACCTGCAGCCATGGCAACGGCTGCCAGGCGACGAGCCCCAAGAAGTGCGCGGCGGCGAAGCCGTCCAAGTACGAGAGC
CTTGTCGGGCTGCGCGGGTACATGTACCACGTGGCCAGGGACCAGCACGGCTGCCGGTTTCTCCAGCAGCGGCTCGACGA
CGGCAAGCGCGAGGTCGATTTCATCTTCACCGGCGTCGCCCGTCACGCCGTCGACCTGATGGTGAACCCATTCGGGAACT
ACCTCATGCAGAAGCTGCTAGCCGTCTGCAGCGAGGAGCAGAGGATGGGCATCGTGCTCACCCTCACAAAGGACCCCTTC
GTGCTCGTCAGGATCTCTCTCAATGTACATGGGTAAGCACCATGTTTTTAACTTTG--------------------TTCC
TGCTAATTGTTTTTTGTTGCTCTTTTCGAATGTAATGTTTTTTATTGCTAAATGTTGTGTCGTTTCTCGTTTTCAGGACA
AGGGCCGTACAGAAACTGATTGAAAGCTTGAGGGCAAGGGAGGAGATCCAGCTGGTCGTCGCAGCTCTGCGCCCCGGGTT
CCTGGAGCTCATAAAGGATCCTAATGGTAACCATGTCGTGCAGAAGTGCTTGCAATCGTTCGGGGCCGATGATAACAAGG
TATACATGTGTGTGTGTGCATGCATCTTAACAAGTTCTGAATATATTGTAGACGAGTTAGTATTTTTATTTAGGTGTAAG
TTAGTCTATTTGGGTCCAGAGAAGTTGTTCCAATCTAGTTACTCTGATCGCTTCAGAAAAGTTTGTAGTAGACCACTTCC
ACTTTTCTGAATTTTGCAGCTTGTATTGTTAATTGTTAATTATTGACCTGAATTTTCCGCAAAATTTTTAGTGAACTGAA
TTTAGATTTTTACTAAA---------------CAGACATAATTAACTCACAATCTACAACTTTCAGCCCATCTTCGATGC
TGCTGCTGTTTATTGCCTTGATATCGGGATGCAATGCCATGGCTGCTGCGTCCTGCAGCGGTGTATTGCGCGTTCGACGG
GTGAGCACAAGGAGAAGCTGGTTGCCGCAATCGCTCGCAATGGGTTCGAACTTGCACAAGATGCCTATGGGTAAAAATCC
TGCCTTGTGCTTCACCTGTAATTTTTCATGTAACCACGAGGCCGGTAAAACAAGCATGGTTAATCAATTACTCCCTTCGT
CTCATAATATAAGAGCGTTTTATTATGAGACAGAGGGAGTATTGTTCTGTCTAGCATATCATTAGTAGGCCAGCCGGCAG
CATGCCTTTGTAAAAGTGGAAACCGTTGATTGTAGAGACCTCTGTATTTCTGTAGACATTCCTACAAATCTTTAGTGCCA
TGATATCTAGCTGAACA--TTTTTTTGAACATAACTTGTTAAACATTTATACACATTAAAGAAAAAGAATGCATTCAACA
AGTTTTACTCTGTATGT-CATAATTTATTCTTCTATATGTTTATTTTTTTTAGAAAAGGAGGATGACCCCCGGCCTCTGC
ATCTGGAAGATGCATACGGCCACTTTATTGATTATTCTCGAGGACCTTACAAAGTGTTACAACAATATGCCTGAATCCAC
CATCTAGGCAACATATGCCGCTACTCCTATCCATACGATGAAGGGGTGCTAGCCGGGCCACTACCCAGACCACTCACCTA
AACCTAACATCAAAAGCCGGAATCCCCAGCCTAGCCACATACCGGGTCTGGGGCATAAACCGGTCTGACGCACTCACAGG
TGTCGTCTCCGCCATCTTCCACTGGTCCATCTCCAAGCAGATTGAAGTGCCAACCTTGGCAGGCTCCTCCGCCATCAACG
CCACCATGACGCCAAATGCGACCAGCACCTACGCTAGAACATCGCCAAGCAGATGGAGCGCTACCACAAGATGAAAATCA
GCGGTAAAATGGCCGCCGCCAAACACCTCACACGCACCACAAAGCGCCCACCGTGCTTCCGGGAACCCCAGGCGACGCCT
TCAAGAAGGAGCGCGACGAAGGTACGACGCCGTCGCCCGCAAGGGGAACTAGAGCTTTCGCCCAAATGAAGAGCACAGCG
AGAAACGGGATAGGATCTCGACAAGGCCTCCAAGAGGGGAACCGACGCCCACAAAGGCGCCGCCATTGTCGTGGCCTCCG
CCGACGGCCAAGGGTTTCCCCCGATCCCGCCCCCGTCCCATCCATCCGGCCACAGACCTGGCCAGGGGAGCGCACGCAGC
CAGAGAAGGCGTTGGACTTCATCGAAGCAGGCACGCCGGGTGACGGGGCACCCCGACCCACCGAAGTAGACGTCCACCGA
GACCTCGCCGCCCGCACAGCCGAAGTCGCGGACCACCAGCTCCCACGGCCGTCGCCCGTCGAGAGGCCACGCCGTCCACA
CCGCCCGAGGCCGCCGCCCCGGCATCCACCCACCGCGCACATCCCGTCAAAACACGAAGAACGACCCACACCGCTGCCAC
CAGGGAGACCACACCGCGAGCACCCAAACCGGGCGACGAGGCAGGGCCGCGCCGGCCAGATCCGGCGGATCCGGCGATCC
CTGGCCCACCAGCCGCCAGAGAGGAGCCGACCCCGATCCAGGGCGAGCCGGCCTGATCTGGCAGTCGGACCTTCCCAGGA
GACCCCCACACCGGATCTGGAGAGGGGCTAGCGACAGCTCCGGCGACCGACGGCCGCCACAGAGGGCCCGCGTCGGCGGC
CACCAGGAGCTGGGGAGGCGGGCGGCGGCGTCTGATGCGGGGTGGGGGCACCTCCAACGTCGAGGCGGGTGCGCGGGGAA
ACCCCGCCGCCGCCTACCGCCGCGCGAGCGGCTGCCGGCGGCAGCGGCTAGGGTTTCGCCCCCGAGTCGCCCGGAGCGGA
CGACGCGGGGGCTCTTTATGTTTATGTTGGTGTATTTTAACTTGTAAACTCATGAGCTTATCTGCTAATGTTGCAGAAAC
TATGTTGTTCAGTATGTGATAGAACTAAAGGTCGCTACTGCAAATGCAAGTCTGGCACAGCAGTTTGAAGGCAAGTACAT
CCACCTCTCCATGCAGAAGTTCAGCAGCAACGTTGTCGAGAAATGCCTGAAAGTTTTCAAGGAAGCCGACAAAGCCAACA
TCATCCTGGAGCTCCTTTCTGCGCCGCAGTTCGAGCGGTTGCTTCTGCACCCTTACGCAAACTATGTGGTCTACGCAGCA
CTTCAGAATTCCAAGGTAAATAACATCTCAACCAAAACAGAGTCAACCAGAGACCACAGTGTTTCTTTTTTTTGAAAGGA
GAGACCGCAGTGTGTTGACATTATGTCTATGCTTGGGTTCTACTGAGCCATTTTGTTGACAGCAACTGATTCCACAGCTT
TTGTGACTGCGACGAATTTTTCAGGGGTCTCTCCACTCAGCACTGACCAACGCCATCCGGCCTCATGTGGAACTACTCAG
AACCAGCCCATACTGCAAGAGGATCTACTCTCGAGCTTTGCTGAAGAAGTGATGGCCTGATGAGACCATCTCACCATGT-
-AACAATAAAGATTGTTTGTCTTGTGCTATTTTTTCGGATTCAAAAGGGATAAAGGTGATCTCGCCATGTAGATTTTGTA
TAGATCAAAATTATTTGGTCATGTACTTCTATGTGCACCTTTATTGGGTGCACTCTTCCGTTGCCATAATCCATCTGGAA
TGGTAAGTTCCGGTTGAACAAATCATCGTATAGATGTTGATGCACGTACATAAGACTGGTGATGCTTCTTGTAACTTAAT
GTTTGCATTTTTACTTGCCCTGCAATTGCTCAACCGAATGCCAGAACATGAAGGCAAATAACTGATTTGCAGTCTAAGGA
AACTTATGTGTGACTTTGTCATGATACATTTCAACATATTTTACTAAGTATCTGGACAGAGGAAATCACAATTAAAATGC
CATTATATTTAACACAACATGAACGGAGCATGAACTTTCAAACGC-CTTTTCCATCTTCTCTAATTAAAAAAAGAAA-AA
GAAAAAACAAAGTTAGCTATGACCCACCACAACGATTCAATATGTTTCACCGTCCAATCACATAATTGGACGTTCTAGAT
CTTCCAATTGTCCCACAAG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CGTCGGTACGTCATTTTCACCCGTCACGGCATGCCCAACTTGAAAGGGCTGCTGCTCCCGCGTGTTGGCGTCAATTGCG
CCCTGAAACAGCCCAATTTGTATCTTACATCATCCCAGGCCCGGCTCGCACTTCTCCCTTCCATCCCCTAAAA-AAAAGA
CTTCTCCCT---------TCGATATAGAGACCCCTT-AAAAAATGTCTCGATATGGAGAAGAAGAAAAAGTCATCCTCAT
TCACCTTGGTTCGTGTTTCCCACGGCGGCAATATAAGATGGAACAGTCTGCCCTTTGTCCTTCTGCTTTTATCTTAATTT
AAGATT--------------------------------------------------------------------------
-
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------------------
---------------------S-------------------S-------S--------S-------S-S-----------
----S-----------------------------S-S-------------------------------S------S----
----S---------S---S--SS---S------S------S-S-----------SS---S--S----------S--S---
-----------S-------------S---S-----S---------SS------S-----S--S-------------S---
-----------------SS------S------------S------S------S---------S------------S----
-------S--SS----------------------S---S--S-S---------S-------------------S-SS---
----------------------S----------SSS----------SSSS-----S-S--------------------S-
----------S----------------S--------------S-S---------S---S---------------------
---------------------------------------------S----------------------------------
----------------------------------------------------SS--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------S-----------------------------------SSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-------------------S-------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-----------------S----------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------------------------------S-------------
-----------------S----------------------------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------S--------------------S------SS---------S----
---S--------S-----------------S-------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
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--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
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-----------------------S--------------------------------------------------------
------------------------S------------------------------------------------S------
-------------------------S------------------------------------------------------
-----------S-----------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
------------------------------------S--------------------------S----------------
----------------------------------------------------------S---------------------
--------------S-----------------------------------------------------------------
-----S--------------SS------------------------------------------------------S---
---------S---------------------------------S--------------S---------------------
-----------------------------S------------S--S----------------------------------
----------------------S----------S-------------SS-------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----S------S----------S-----S--------------------------------------------------
-----------------------------------S------------------S--------------S----------
---------------------------S--------S-------------------------------------------
----------S-------S-------S------------------------------S----------------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_374
--------------------------------------------------------------------------------
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----------------------------------TCTTCATCTGCGACGGTTGT--------------------------
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>reverse_2031
--------------------------------------------------------------------------------
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------------------------------TCATGTCGTGCAGAAGTGCT------------------------------
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-
>forward_515
--------------------------------------------------------------------------------
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---------------TCAGTGCTTGTAGTCGTCGT---------------------------------------------
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-
>reverse_2476
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CACGG
GTGAGCACAAGGAG------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_1184
--------------------------------------------------------------------------------
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---------------------------------------------CGAGGACGACGACGATGAC----------------
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-
>reverse_4554
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------ACCAACA
TCATCCTGGAGCTC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_1186
--------------------------------------------------------------------------------
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----------------------------------------------GAGGACGACGACGATGACGA--------------
--------------------------------------------------------------------------------
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-
>reverse_4676
--------------------------------------------------------------------------------
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-----------------------------------TACAGAGTCAACCAGAGACCG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_4652
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------------------------------------------------------------------------ACGCAGCA
CTTCAGAATTCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>reverse_6808
--------------------------------------------------------------------------------
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-------AGAAACGCTTTGCATCAGGC-----------------------------------------------------
-
