>input_sequence_33895
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------------------------------------------------------------------------------AT
GAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACC
GCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACAC
AC-----------TAAAATTAATAAATTTCATCCACATTATCATACTAGT---TTCTCTAATCAGATGCCATATACAGTA
CAAGATTACGTTGAAAAGAAATTCACAAG-CTGTTCATGAACTTGACCCTAATTAGTACTAGATGTGACAAGGCAGCTGT
TCGTGCTGTGGACGTTTAATTAGCCTGTCGTAGGTAATCATCTTAGATTATCCC-TTTTGAAACATAATCTTAGCTGGTT
TAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTCTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCC
CCGACAC-----TCTGATTGCAGACATCTATTTGGAGCAACTGTTAAAGGTTCCACA--TATATGATCGACTTGTCCAAA
CAAAATTAATCTAATCCAATCCGTGCACATTATGGTCCAGACCCGGAATTGTCACCCTACACAC-----CCCCTATCTCC
GTTGAGCTGTG-----ATCTCATATACCTGATATCCACATTATCATCGCA--CGCAGGTACATATATCTTGGCCTCTTTG
ACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATATCCACATTAAGGAAGCTCACAAAACCTCCTTAATTTC
CGCTCACTCGCTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTG
TGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGGTACTACAACACAATCAGTC
TCACCTGTCGATTTTCTCCAATCACACCCAAGTCTTATCTCATTGATATCTTCGTTGTTTTCTTAGCAATTGTTGATGCT
GATGCTCTTGACTTGGATCTTCGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCGTCGCCGGCCTTCA
GTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAGAAATTAAATTAATCATGTTTAGCAC
TAGCTAGCTCAGTGGTTAGATCGCTGGAATAGAAAAAATTCCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGA
TCCAGGTCGTATGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTTTTGATATCGCTGTAGCCAATGAGCTCAT
CTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGT
CATGGCTTCTACCCGAACGTACAGGTATCATC---ACTACGAGAACGACCCCTCCTCCTCCTAGTCCTCATCCTCTGCTT
GGCGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTGCTGAATAATGTTTCAGACGAAACTGTTGATGACATTT-CA
GTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTCCATGTTTCTTTCCTGGTG-AAACTAATCATGCCTGCTCTCCTAAA
AACGTGTACAAGTGCTGGAATTCTGGGTGTAGTGATGTGTCTATTGACTGAGCTGCTTGCTTTTTTGAAACGAAACGCAA
GCTTTTCG-TTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTA---CCAGAGTACTTG-------------
-----GTTTCTCCTGTGAGCTT-------------------------GCACCTCCTTTCAGAAAAAAACTGCAGTGCGTC
CTCCGGTTCTTACAGTTGCATCCGTCCTCCATGACACAGCTTTAGATGTACTCCCTCCGTTCTGAATTACTTGTCTTAAA
TTTGTCTAGATACGGATGTATCTAGACTCATTTTAGTGCTAGACATATCTGTATCTAGACAAATCGAAGACAAGTAATTT
GGAACGGAGGGAGTAGCTTGCTTAGGTGTA---GTGGTACCCTGATCACATGGTGCAGCTTTATTCTTGGTAGACACTGT
GCATTCACATGAAAGCAAGCTTTGGTGCTTGCATGCACGGCCATAACTTGACGCTCTCTCTCT-----------------
---CAGGTGCAGGTGCAGGAGAGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCGGCTGGGGGTGGCA
AGCGCAAGCCACGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTA---CCGCCG
CCGGCGCGCACCCCGCCCCGCCGCCGCCG---TCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAAC
TAG-----------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G486900
ATTTATAGGTCATTTATCTCATTTTTCTCAAACGTTTTTTTTTATTGAAAGGAGGCATTTACCTTGTGGAGCAAAATGTT
GAAGGCGGCTGTCCGGGCCAAAAAAAAAAACTCGGTTGATCCGCCTGGGAGGGCGACACGTGGCGTCCCCATCCGGGGGG
TGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGCACAAAAAAAGTTTACCTGTGATGCCCTTGGGCTCCTCGACGTCCCA
TCTCGCTTTCTTTCTT----TCTCTTTCTCCCACTGGCCTGGGAGGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCC
CCCGCCCCATGGCCACCACCACCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNN-------------------------------------------------------------------
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---------------------------------------------CGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCG
GCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGC------CGGCGGC---TTCCGGTTCGGCCTGCT
CGGGAGCCCCGATGACGACGACTGGTCCGGCGAGCCGGCGCCGGCCGCGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCG
CGTCGCCGCC------------CGCGCCCGGGATGATGATGGGGCAGCAGGCCCCGGCGCC---GCCGATGGCCCCCGTG
TGGCAGCCGCGCCGCGCCGAGGAGCTGGTCGCGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGCGGGCCGAGGTC
GCGGAGCTCGCAGTACAGTGGTAGTC------------------------------------------------------
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-AGTGCGCCGGATA---ATATATGGGTGGTTTGTCCGATGGTTGATATCCTGTGGGTGGTGGTGGTGCTTTTTGCCAGAT
GAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACC
GCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACAC
AC-----------TAAAATTAATAAATTTCATCCACATTATCATACTAGT---TTCTCTAATCAGATGCCATATACAGTA
CAAGATTACGTTGAAAAGAAATTCACAAG-CTGTTCATGAACTTGACCCTAATTAGTACTAGATGTGACAAGGCAGCTGT
TCGTGCTGTGGACGTTTAATTAGCCTGTCGTAGGTAATCATCTTAGATTATCCC-TTTTGAAACATAATCTTAGCTGGTT
TAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTCTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCC
CCGACAC-----TCTGATTGCAGACATCTATTTGGAGCAACTGTTAAAGGTTCCACA--TATATGATCGACTTGTCCAAA
CAAAATTAATCTAATCCAATCCGTGCACATTATGGTCCAGACCCGGAATTGTCACCCTACACAC-----CCCCTATCTCC
GTTGAGCTGTG-----ATCTCATATACCTGATATCCACATTATCATCGCA--CGCAGGTACATATATCTTGGCCTCTTTG
ACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATATCCACATTAAGGAAGCTCACAAAACCTCCTTAATTTC
CGCTCACTCGCTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTG
TGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGGTACTACAACACAATCAGTC
TCACCTGTCGATTTTCTCCAATCACACCCAAGTCTTATCTCATTGATATCTTCGTTGTTTTCTTAGCAATTGTTGATGCT
GATGCTCTTGACTTGGATCTTCGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCGTCGCCGGCCTTCA
GTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAGAAATTAAATTAATCATGTTTAGCAC
TAGCTAGCTCAGTGGTTAGATCGCTGGAATAGAAAAAATTCCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGA
TCCAGGTCGTATGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTTTTGATATCGCTGTAGCCAATGAGCTCAT
CTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGT
CATGGCTTCTACCCGAACGTACAGGTATCATC---ACTACGAGAACGACCCCTCCTCCTCCTAGTCCTCATCCTCTGCTT
GGCGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTGCTGAATAATGTTTCAGACGAAACTGTTGATGACATTT-CA
GTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTCCATGTTTCTTTCCTGGTG-AAACTAATCATGCCTGCTCTCCTAAA
AACGTGTACAAGTGCTGGAATTCTGGGTGTAGTGATGTGTCTATTGACTGAGCTGCTTGCTTTTTTGAAACGAAACGCAA
GCTTTTCG-TTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTA---CCAGAGTACTTG-------------
-----GTTTCTCCTGTGAGCTT-------------------------GCACCTCCTTTCAGAAAAAAACTGCAGTGCGTC
CTCCGGTTCTTACAGTTGCATCCGTCCTCCATGACACAGCTTTAGATGTACTCCCTCCGTTCTGAATTACTTGTCTTAAA
TTTGTCTAGATACGGATGTATCTAGACTCATTTTAGTGCTAGACATATCTGTATCTAGACAAATCGAAGACAAGTAATTT
GGAACGGAGGGAGTAGCTTGCTTAGGTGTA---GTGGTACCCTGATCACATGGTGCAGCTTTATTCTTGGTAGACACTGT
GCATTCACATGAAAGCAAGCTTTGGTGCTTGCATGCACGGCCATAACTTGACGCTCTCTCTCT-----------------
---CAGGTGCAGGTGCAGGAGAGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCGGCTGGGGGTGGCA
AGCGCAAGCCACGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTA---CCGCCG
CCGGCGCGCACCCCGCCCCGCCGCCGCCG---TCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAAC
TAGCTCTCTCTCTCTCTCTCT--GCTTGCTCGGCCACGGACGGTGGCCGACGCGCGTGTGTGT--TGGAGGTGCTCGCGC
CTCATCGGTAGCCGTTGTTGTGAATTAATCG---------------------------------GAGTGTGACTGGCCCA
GGCTGGTTCCTCTCC------GCGTCGCCGTGATCAGGATCACGAGCATCGTGGCTGCTCGTTATTCGATTCTCATGTAT
CCATTGCTCAAGTTTCCCAAACAGACTCTTGAAAAAACTTGGAAATTGTTGATGGCAAGTTCATGCATGCATGGGTCACA
TTGC-GCCCTTGCCGAAGAGCGAC--------GTCTGTTGTTTTA----------CCGTTGGTGCGTTAACCGTTGGGCT
TTTCTGACCGAGGACGAGCGGTGATTGACAGGTGGGGCCTACGCGGACGCGACGGGTGGGCAGTGAGGAGGCAGCGAGCG
ACTGGGTGAGGTGAGGTGAGGTGAGTAGGCCGGGGTAGGCGGTCAGTGATTGTTCGTTGCCATCCTCCATTCGGGGAGCG
AC-----CTCCGATTGATGGGCCGTAACCGCAGCTGGAGTCGTGTCACTTTTAGCCAATCCCCTTCATTATTTTTTTCCC
TTTTCCCTTCCTCTTCACTTCAATCCCGCACAGTGAAGTGAAAGCCTTTGAGGCTGTTCGGGTGTGC-------------
--CCTTGTGGCGCTAGCCAGCTATCTTTGCCA-------------------CCCACCCACCCATCCAACCATCCATCCAC
AATAGCAAAGCTAGTA---------GTACTGGTACTGTGCC----------AGTAGTACGCTGTAGC----------GCG
TGGGGG-------CGCTCTCGCTCTGGCTGGCCGTGCAGCACACTACCTACAGTG---------------GAGCAGAGCA
GTAGCCCAGCCGGAGCG-----GCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGCCGTGTGTGCAGCCGCGCCAGAGCAT
----GCATGCGTCA--------CTCCCTCCGCGGCGCTGCTGCATGCACAGAGCGATCCCCACCCTCCTTTGGCGACTCG
TGCGT--------------------------CGCCTCGGTCGCCGCGAACTGCACTGCACACTCTGCAGCTCAGCTCA
>chr5A_35
TTTTTTCTTCTTTC-------------------------------TGAGAGGAGGCATTTAGCTTGTGGAGCAAAATGTT
GAAGCGGCT------GGGCGAAAAAACC--CTCGGCTGATCCGCGTGAGGGCACGACACGTGGCGTCCCGGTCCACGGGG
TGTGTGGCCGTAGCGATTAGCGAGGCTCCGCTGCACAAAAATAGTTTACCTCTGATGCCCTTGGCCTCCCCGACGTCCCA
TCTCGCTTTCTCTCTT----TCTCTTTCTCCCACTGGCCT----GGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCC
CC-GCCCCATGGCCACCACCACCACGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCGGTCCAGGTCGGTCGCTCGGAGCCGAGCGGCGGCGGGCGGG
CGAGGAGTGCGTTTTATTCGGT------CCCGGCGGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTGGAGTCGCCG
GCGGACTCGGGCACGTCCAGCTCCTCCGTGCTCAACTCCGCGGACGCCGGTGGCGGCGGC---TTCCGGTTCGGCCTGCT
CGGGAGCCCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGCCCGGGTTCGTCACGAGGCAGCTCTTCCCCG
CGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGTGACGATGGGGCAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTG
TGGCAGCCGCGGCGCGCCGAGGAGCTCCTCGTGGCGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTC
GCGCAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGTCAGCCCTCCTCT
CGTCTCCCTACTCCTCCTCCATGACTATAGTTATTACCCAAATCACTAATCAATCGCTGGCCTTTGTCCGTCTGATTCCA
CCAGGGATTGCGGGAAGCAGGTCTACTTGGGTGAGCTCAAACAAATCCCAGCTCGAGCTCCGATCTCCTCGGTGTCTAAT
TTCGATTATCTTAGCTGTATGGGCTCGTGATTAACACTGGATAATTTCTTCAGGTGGTTTCGACACTGCGCACGCGGCCG
CAAGGTGAACTAATTAATTAACCAGGCCTCGTTTGAATTCCTTTTGCCCCGATTTGGCCACGAACTGTGTACTGAGATGA
GACGGTGTGGCGTGGCGCAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCT
GAGCGACTACGAGGAGGATTTGAAGCAGGTAATCTTATCCAAGCCTAGTTGATTGC------------TGTACTACCAAG
TAGTGCGCCGGATACATATGTATCGGTGGTTTGTCCGATGGTTGATATCTGGTGGGTGGTGGTGGTGTTTTTTGCCAGAT
GAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACC
GCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACAC
ACAGCTCACGCACTAAAATTAATTCACTTCGCCCACATTATCATAGTAGTAGTTTCTTTTATCAAATGCCATTG-----A
CAAGATTCAGTTGAAATGAAATTTCACAGACTGCTCATGAACTTGACACTAATTAGTAGTAGATGTGACAGGGCAGCTGT
TCATGCTGTGGACGTTTAATTAGCCTGTCGCAGGTAATCATCTTAGATTACCCC-TTTTGAAACATAATCTTAGCTGGTT
TAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTGTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCC
CCGACACGACACTC-GATTGCAGACATCTATTTGGAGCAACTGTTAGGCTCCACATAAGTATATGATCGAGTCGTCCAGA
CAAAATTAGTCTAATCCAATCCGTGCACATTATGGTCCAGACCCAGAATTGTCACCCTACACCTTCACACCCCTATCTCC
GTTGAGCTGTGGTCTCATCTCATATACCTGATACCCACATTATCATCACACGCGCAGGTACATATATCTGGGCCTCTTTG
ACAGCGAAGTTGAAGCTGCAAGGTACTTTGATTTGCGCTGATCATTAACATTTGG--GCTCACAAAACTTCCTTAATCTT
TGCTCACTCACTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTG
TGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGGTACTACT--ACAATCGGTC
TCACCTGTCGAATTTCTCCAATCACACCCAAGTCTTATCTCATCGATATCGTTGTTGTTTTCTTAGCAATTGTTGATGCT
GATGCTCTTGACTTGGATCTGCGGATGTCGCAACCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCA
GTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGATCTCTTCTCAGGTAAAGAAACAA----AATTATGTTTAGCAC
TAGCTAATTCAGTGGTTAGATTTGCTCAAATAGAAAATTTGCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGA
TCCAGGTCGTATGGCATATACTCTGTCCTAAACTTACGATATTTGTGCCTTT-TGATATCGCTGTAGCCAATGAGCTCAT
CTTCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGT
CATGGCTTCTACCCGAACGTACAGGTATCATCATCACTACGAGAACGACCA--CCTCCTCCTCCTCCTCCTCCTCTGCTT
GGTGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACCACTGAATAATGTTTCTGAAGAAACTGCTAATAACATTTTCA
GTTTTCGACAAGTTCGTTCCTGAAATTAAGGTTTCCATGCTTCTTTCC----TAAAACTAATCACGCCTGCTCTCCTAAA
ACATCTACAG-GTGCAAGAATTTTGGGTGTAGTGATGTGTCTGTTGACTGA-----------------------------
------------GCATCTCGTCTCATGGACAGACAGAGCATGCTGTGTGGTAGTACCAGAGTACTTACTAGATGTGGGCA
CTACTGTTTGCCCTGTGAGCTC-------------------------GCACCACCTTTC-GAAAAAAACTGCAGTGCGCC
CTCCGGTTCTTGCAGTTCCATCCGTCCCCCATGGCACAGCTTTAGATGCA------------------------------
--------------------------------------------------------------------------------
---------------GCAGCAGCTTGCTTAGTTGTAGTACCCTGATCACATGGCGCAGCTTTATTCTTGGTAGCCACTGT
GCATTCACATGAAAGCAAAGCTTTG---GTGCATGCACGGCCATGACTTGACGCTCTATCTCACTGCTGG-----TGCTG
GTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGGCA
AGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTTTCTACCGCCGCCG
CCGGCGCGAACCTCGCCCCGCCGCCGCCG---TACCCGGAC---CACCACCGGTTCTACTTCCCCCGCCCGCCGGACAAC
TGAAGCTGGCCGTTGTGACCAGACGGCGGTGGGTGCGCGCGGTCGAGGTGTTCGCT--------------------CCTC
GTCGTCGGTAACGCTTGTTGTGAAACTATAATCGGAGAGAGATG-ACATTGCCAGGCCATGTGTGGTGACACTACT----
GGCTGGTCTCTCGCC------GCCTCGCCATGATCGGGATCACGCGGATCATGGCTGTTC---ATTAGATTCTCATGTAT
CCAATGTTCAAGTTTCCCAAACGG----TTGAAAAAACTTTGAAATTTGTGATGGCAAATTCATGCATGGGTCG--CACG
GTGC-GCCCTTGCACAAGCGCGGGGAAGCAC--TCTGTTGTTTTACAGCAGTCCGCCATTGTTGCGTTAACCGTTGGGCC
-TTCTGGCCGAGGGCGAGCGGCGATTGACAGGCGGGCCCTCCCCGGACGCGACTGGTGG------------------GCG
ACTAGGTGAGGTGAGGTGAGGTGAGTAGGCTAGGCGGTG-GGTCAGTGATTGTTCGTTGCCATCCTCCATTCTGGGAGGG
GAGCAAGCTGTGATTGATGGGCCGTAAACCGCAGCAGGCATCACCTTTTTCTCCTCGCTTCCTA----------------
------------------TTCAATCCCGCACAGTGAAGTGAAAGCCTTTGTGGGTG--------------------CCCC
GGCCTTGTGGCGCTAGCGATAGCTAATAAGCCAGCTACCCATGTTTGCCACCCCACCCACACACCCATCCATCCATCCAC
AATAGCAAAGCTACCCGTAGTACTATACCAGCGCCACTGTGCCATGCCAGTAGTACTACGCTGTAGCCTGTAGCTGAGCG
TGGGGCTCGCTCTCGCTCTCGCTCTGGCTGGCCTGGCCGTGCAGAGTGCGCTAGAGCGGGCACTGGAGCGGCACAGT---
GCGGCCCGGCCGGAGCG-----GCTTCTCGTCCGCTGCGCCCAATGGCGCCGCGCCGTGTGTGCAGC---GCCAGAGCAT
----GCATGCGTCGCGCCCGCCCTCCCTCCGCGGCGCCGCTGCAGA---------ATCCCCACCCTGTTTTGGCGATTCG
TG-----------------------------CGCCTCGGTCGCCGCGAACTGCACTGCAGCTACCTCTGCGGC-----
>chr5D_73
------------------------------------------------------------------------AAAATGTT
GAAGGCGGCTGTCCGGGCCAAAAAAAAC--CTCGGTTGATCCGCCTCGGAGGGCGACACGTGGCGTCCCCATCCGCGGGG
TGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGCACAAAAATAGTTTACCTCTGATGCCCTTGGCCTCCCCGACGTCCCA
TCTCGCTTTCTTTCTCTCTCTCTCTTTCTCCCACTGGCCT----GGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCC
CCCGCCCCATGGCCACCACCACCACCGCCTCCTCCCCCTCCCCCTACCACTACTTCTACTCCCCCCGCCTCGCCCTCGCA
GCCCGCGGCCGCCGCGCTCCCATGCCATAGACGCGACCCC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ACTCATCGGTCGAGGTCGGTCGCTCCGAGGCGAGCGGCGGCGGGAGAG
GCGGTGGGTCAAGCGAGTTTCGGAGGCGCCCGGCGGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCG
GCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCT
CGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCG
CGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGCGCC---GCCGATGGCCCCCGTG
TGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTC
GCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGTTAGC---CCTCT
CATCTCCCTACTCATCCTCCATGACTATACTTA----CCAAATCATTAATCAATCGCTGGCCTTTGTCCGTCTAATTCCA
CCAGGGACTGCGGGAAGCAGGTCTACTTAGGTGAGCTCC-ACAAATCCCTGCTAAAGCTCCGATCTCCCCGGTGTCTAAT
TTCGATTATCTTAGCCATGTGTACTCGCAATTAACACTGGTTAATCTCTTCAGGTGGTTTCGACACTGCGCACGCGGCCG
CAAGGTGAATTTATTAATTAATCAGGCCTTGTTTGAATCCCTTTTACCCCGATTTGACCACGAACTGTGTACTGAGATGA
GACGGTCCGGCATGGCGCAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCT
GAGCGATTATGAGGAGGATTTGAAGCAGGTAATCATCTAAGCTGTAAGCTATAATCTGAGTAGAAGATTGTACTACCAAG
TAGTGCGCCGGATA---ATATATCGGTGGTTTGTCCGATGGTTGATATCCGGTGGGTTGGGCTTGTGTTTTTTGCCAGAT
GAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACC
GCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACAC
ACAGCTCACGCACTAAAATTAATTCACTTCGTCGACATTATCATACTAGT---TTCTTTAATCAAATGCCATATACAGTA
CAAGATTACGTTGAAATGAAATTCACAAG-CTGTTCATGAACCTGACACTTATTAGTAGTAGATGTGACATGGCAGCTGT
TCATGCTGTGGACGTTTAATGAGCCTGTCGTAGGTAATCAATCTTAGATGATATATTTTGAAACATAACCTTAGCTGATT
TAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTGTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCC
CCGACAC-----TC-GATTGCGGACATCTATTTGGAGCAACTGTTAGGTTCCAC--------ATGATCGTGTTGTCCAAA
AAATAATAATCTAATCCAATCCGTGCACATTATGGTCCAGACCTGGAATTGTCACCCTACACAC-----CCCCTATCTCC
GTTGAGCTTTG-----ATGTCATATACCTGATATCCACATTATCATCGCA--CGCAGGTACATATATCTTGGCCTCTTTG
ACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATCATTAACATGCGG--ACTCACAAAACTTCCTTAATTTC
CGCTCACTGACTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTG
TGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGGTACTACT--ACAATCAGTC
TCACCCGTCGATTTTCTCCAATCACACC-AAGTCTTATCTCGTTGATATCGTTGTTGTTTTCATAGCAATTGTTGATGCT
GATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCA
GTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAA-----AAATTAATCATGTTTAGCAC
TAGCTAACTCAGTGGTCAGATTTGCTCCAATAGAAAATTTCCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTCA
TCCAGGTCGTCTGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTT-TGATATCGCTGTAGCCAATGAGCTCAT
CTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGT
CATGGCTTCTACCCGAACGTACAGGTATCGTC---ACTACGAGAACGACCCCG-----TCCTCCTCCTCCTCCTCTGCTT
GGTGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTACTGCATAATGTTTCACAAGAAACTGTTAATAACATTT-CA
CTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTACATGTTTCTTTCCCTGGTAAAACTAATCATGCCTGCTCTCCTAAA
AACATCTACAAGTACTAATCATTGACTGAG-----------------CTGAGCTGCTTGCTTTTTTGAAACGAAACGCAA
GCTTTTTCATTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTAGTACCAGAGAACTTACTAGATGTGGGTG
CTACTGTTTCCCCTGTGAGCTCTCCTGATTGATGGTTCCGTGAGCTTGCACCACCTTTC-G-AAAAAACTGCAGTGCGTC
CTCCGGTTCTTACAGTCCCATCCGTCCTCCATGACACAGCTTTAGATGTA------------------------------
--------------------------------------------------------------------------------
---------------GCTTGCTTAGTTGTA---GTAGTACCATGATCACATGGCGCAGCTTTATTCTTGGTGGACACTGT
GCATTCACATGAAAGCAAGCTTTGCTGCGTGCATGCACGGCCATGACTTGACACTCTCTCTCGCGTTGTTGCCACTGCAG
GTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCA
AGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTA---CCGCCG
CCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAAC
TAGCTCTCTCTCTCTCTCTCTCTGCTTGCTCGGCCATGGACGGTGGCCGACGAGCTTGTGTGTGTTGGAGGTGCTCCCGC
CTCGTCGGTAACAGTTGTTGTGAAT---TAATCGGAGAGAGACACACGTTGCCAGGCCATGTGTGAGTGTGACTGGCTGA
GGCTGGTTTCTCTCCGCGTCGGCGTCGCCATGATCAGGATCACGGGCATCATGGCTGCTCGTTATTAGATTCTCATGTAT
CCATTGCTCACGTTTTCCAAACAG----TTGAAAAAACTTGGAAATTGTTGATGGCAAGTTCATGCATGGATGGATCACA
CTGGTGCCCTTGCAGAAGAGCGGGGAAGCACAGTCTGTTGTTTTA----------CCGTTGGTGCGTTAACCGTTGGGCT
TTTCTGACCGAGGACGAGCGGCGATTGACAGGTGGGTCCCACCCGGACGCGACGGGTGGGCAGTGAGGAGGCAGCGAGCT
ACTG----------GGTGAGGTGAGTAGGCTGGGCTAGGCGGTCAGTGATTGTTCGTTGCCATCGTCCATTCTGGGAGCG
AC-----CTCTGATTGATGGGCCGTAACTGCGGCTGGAGTGGT---------AGCCAATCCCCTGGTGAGGTGAGTAC--
-------------------TCAATCCCGCACAGTGAAGTGAAAGCCTTTGAGGCTGTTCGGGTGTGCCCTGCCCTCCCCT
GACCTTGTGGCGCTAGCCAGCTATCTTTG---------------------------CCACCCACCCACCCATCCATCCAC
AATAGCAAAGCTAGTATGTACTGTAGTACCAGTACTGTGCC----------AGTAGTAGGCTGTAGCCTGTAGGTGCGCG
TGGGGG-------CGCTCTCGCTGTGGCCGGCCGTGCAGCACACC--------------GCACTGGAGCAGAGCAGTGGA
GCGGCCCAGCCGGAGCGGAGTGGCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGCCGTGTGTGCAGTGCCGCGGCAGCGC
CAGAGCATGCATCA--------CTCCCTCCGCGGCGCCGCTGCATGCATCACTCCCT-CCCACCCTCTTTTGGCGACCCG
TGCGTGCTCTCCAGCGGTCCAGCCAGCCAGCCGCCTCGGTCGCCGCGAACTGCACTGCAC------------------
>SNPs
S---S-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------S------------------
---------------------------SSS---------------------------------------------S----
-----------------------------------------S---------S------------S----S----------
----------------------------------------SSSS------------------------------------
-------------------------SSSS---------------------------------------------------
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---------------S--------S-------------------S--S--------------------------------
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-----------S--------------S----S------------------------------------S-----------
------------------S--SSSSS------------------------------------------------------
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-----------------------S--------------------------S----------------S------------
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-----------------------SS-S---S--------------------------S------S---------------
----------------S------------------------------S----------S-----------S---------
--S-----------------------------------------------S-----------------------------
-------------------------------------S------------------------------------------
--------------S-------------------------------SSSSSSS--S--------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------SSSS-SSS-SS--SS-----------S-----------
---------S----------------------------------------------------------------------
-------------------------------------------------------------------SSS----------
--------------------------------------------------S-S---------------------------
--------------------S---------------------------------------------S-------------
----------------------------------------------------------SS--------------------
------S--------------SSSSSS--SSSS----S------------------------------------------
----------------------------------------------------S---------------------------
-----------------------------------------S--------------------------------------
----------------------------------------------------S---------SS-----S----------
--S------------------------------------S-----------------S---------S--S---------
------------------------------------------------SS-SS---------------------------
---S-S----------S-----S-------------------S-------------------------------------
------SS----------------------------------------------------------S-------------
----------S----------S------------------------------S------S--------------------
-----------------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--------------------S-----------------S--------------------------
----------------------------S---------------S-----------------S-----------------
--------------------------S-----------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S------------------S--------------------S---
---S------S-S------------SS--SS----------------------------------------------SS-
--------S--------------------S--------------S-----S---------------S-------------
------------------------SSSS-----------------------------------------S----S-----
S------------S--------SS--------------------------------------------------------
---------------------S--------------S-----S-------------------------------------
------------------------------S---S-------------------------------------S-------
----------S--------------------S--------S--SSSSS--S-------------SSSSSSS-SSS-S-SS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
-----------------------------S-S-------------------------------S---S------------
-----------------------------S--------------------------------------------------
--------------------------------------------SSSSSS-SSSS---------------------S-S-
-SS----------------------------------------------------------------SS-----------
-------------------------------------S----------SSSSS-S------------S------------
------------------------------------------------------------SSS-SS-S--SSSSSSSS
>forward_281
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---------------------CTCTTTCTCCCACTGGCCTG---------------------------------------
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>reverse_3078
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-------------------------------------ATTCCTGTTGGCCCAGTTGT-----------------------
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>forward_1225
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-----GCTCGCAGTACAGTGGTAGT-------------------------------------------------------
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>reverse_3344
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---------------------------------------------------------------GTCCTCATCCTCTGCTT
GGC-----------------------------------------------------------------------------
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>forward_3333
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---------------------------------TCACTACGAGAACGACCCCT---------------------------
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>reverse_5247
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----------------------------------------------CCTACAGTGGAGCAGAGCAG--------------
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------------------------------------------------------------------------------
