>input_sequence_33879
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-------------ATGAAGCTTCTAAGAAGCAAATTCCACTCCCTAGCAATGACTTGCTGTCCTGTGTTCCGGTGGAAGA
GAAAATCCAGAAACCAAATTGTACAGCAGGACATAGGTAAA-CCTGCATATCTCATTTAACTTTTGTTCTTCTGAAGCAT
CCTAAAACCCTCCTGATTCATCCTATTCTGTTCAGACATACCGCTCCATGGCAACGTGAAGATATACTCCTCCAAGGAGC
TCAAAAGGGCCACAAGGAACTTCTGCTCAGGAAACAAACTTGGACAGGGTTCTTTCGGCTGCGTTTACCTGGTAGGTTTA
GTTGCCAGTTTGGCAGTTTGCACCATAAAAGCTTTGATATTTCCAAGTTCAAACACCACAATATATTTATCCTTTAACAT
GTCTTATGCACCAATCAGTCATTCCAAATAATCCTGAATTATTAGAAAGCGGCAGGTTATACTATTCCTGCCGTAGTGAT
TAGCATCACTGTAGCACTTGGACCAGCTATCAAAATTCAAACAGTAGTGTTTCAAGAGTGCTCAGGCTCTGGTCTGAATT
ATGCAGGGAAAGCTGAAGAATGGTCAGAAAGTTGCCATCAAGGTGCTCTCCTCCGAGTCAAAGCAAGGAACAAGGGAGTT
CTTGAATGAACTGAGTGTCATATCCAGCATAACCCATCACAACCTTGTAAAACTGCACGGCTGCTGCGTCGATGGAGGTC
AGAAAATGCTGGTCTACAATTATCTGGAGAACAACAGCCTCGCAAGGACCCTCTTTGGTATGTTCAACCAAATTTCGATT
TTCATCAGAACTTTGAATCGCTGGTAAATTCATTGCTCTGAACCCCCTGGTTTGTCATGATGTTGTTCAGGCAATGCCCA
CAGTAGTATCCGCTTTGACTGGAGCACAAGGGCGAAGATCTGCATTGGTGTTGCCGAGGGTCTCACATATCTGCATGAAG
AAATCCGGCCACATATCGTCCACCGTGACATCAAGGCGAGTAACATTCTGCTTGACAAGGACCTGAGCCCCAAAATATCA
GATTTCGGGCTAGCAAAGCTCTTCCCAGGCAACATGACGCATATCAGCACGAGGGTTGCAGGAACATTGTAAGCAAAGTG
ACACCTGTTGCTGCTCTCATTTAACCTTGCATATATTGATATATACTGTACTGTGTGGTTAAGACAAGTTGACATATGCT
CATTTCTCAGAGGGTATCTGGCACCGGAGTATGCAATCCGAGGGCAGCTCACAAAGAAGGCTGATGTGTACAGCTTTGGC
GTTCTCCTGCTGGAGATTGTCAGTGGAAGGTGGCACACCGACCCCAGATTGCCTCTCCAAGATCAGTTCCTCCTAGAAAC
GGTAAAGAACAATTTCAATAAATATATGTACTTAATTATGATTCTCTAGAAAGTTCAGAAAAA-ATATCAGGAAAAACAA
ATACGTATTTTCTGTC--------TAGTACAGAATACATCTATGATAGATTCAAGATGTTCCACATCAGACCATGATAAT
CATGCCAGACATATACCTACTATGTGCACATGGTTGAACAATTTAGATAATCACAAGTAGATGCGCATAATATACTTGCC
ACAGTTGGAAGCATTCTTTATTTTTTGATGAAGAGGAAATACAGTTGGAAGTATTCTGAAGGAAAGTACCAGGAAGTTTC
CTCTCTGTCCTGAAAATTACTATTTTTGGTAGTACTGCCAGCTTTCATTGTCTTATCTTAAGATTATTTTTTATTGGCCC
ACTGGTTCTGGATTGGTTTCTGAAAATGTTTTCTATGCCACTTGCATTGACTGGTGTTCTCATTCTTAGGACAT-----A
TCTGTTAG-TTTTGTCCAATTATTATATGCACCTGCTATTGCATTGTAAAACAGCGATTTATGAGAGATCTTTAATCTCT
TACCCTGCAAAGAGAAGTGAAAAGGTTCTATTTCAAAAATAGCTGAAGCATTGTCTCTTGACATTGTCAATAGTAGATTA
AAGAATATAAATCAGAAATATCCACTT-TTTTTGCCAGGCTTGGACACTCTACGAGTCTGGTGATCTTGGGAGCATCATC
GACAGGACCTTAAAAGATGGTTTCAGCACCGACGAAGCTCATAAGTTCTTGAAAATAGGACTCCTGTGCACCCAGGATAG
CCCCAAGGTCAGGCCCTCCATGTCGACAGTCGCCAAGATGCTAAAGGGTGAGTGCCCCGTCGGCGACAAGATCATGAGGC
CAGGCCTGATCACAGATGTCATGGACCTGAAAGTCAGAACAATCGAGCCTGCTCTTCAGTTAAGTGTGTCTCCATCAATG
TCTCCGCTGGATAACCACTCACTGGTGTCTAACCTTGCATCCGCTGGTAGCACTGTGATAAGGGACAGCCCCTGA-----
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------------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G059300
GGTTTCCTTTTCTCCCTTTTGCTGAATCTACCCAATCGCCCTGGCTAGATATGTTTTGAGAATTTTAATTGTCCTATGTT
TTGCCGTCTGTTGC----AATCCATCCATGGG------------AATCATTTGATTCGCTTCTAGTTCCTTTCATTCTTG
TGTTTTATCTTAAACCATCAAGTTCATCTGGTTCTGTTCCAGTGATCTCAGTTG---CCTGTTGAACATTTGAAGTTCAG
GGGTCATGCTGAAAATGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTGATTTTGTTTATCAAAAGTAGAGTACTCCACACA
AAATATTCTTCATATGTCCATTAACTGTAACCAGCTTGCTTAATTTCTACATTATTTCATTGGAATTTCACACAAAAGCA
TAGTG----TTTTTTTTCCTGCTGCGCCTCAGAGGAAGAATAAACATCAG-----TATCTATTTGAATTAC-----GAGT
GCCACCTGTTATGCCATTTTCTTATCTTGGAGGACATCTTACCACTTACCAGATTAGCTTCTTGA-AGTTAAATTAGAAA
TACATAAGTAGCTTCATTCTGTGTAGGAG---------------TTATTTTATGCGGCTGAAAGGAAATTAAAAAACTCC
AACA---AGATACTTACATAATCCATTTGATTGTTGTTCTTTT-CCTCAGGTTCTTGTCGAACTCTTCTTTGCATGAGCT
TTTGAATACCTATATGAAGCTTCTAAGAAGCAAATTCCACTCCCTAGCAATGACTTGCTGTCCTGTGTTCCGGTGGAAGA
GAAAATCCAGAAACCAAATTGTACAGCAGGACATAGGTAAA-CCTGCATATCTCATTTAACTTTTGTTCTTCTGAAGCAT
CCTAAAACCCTCCTGATTCATCCTATTCTGTTCAGACATACCGCTCCATGGCAACGTGAAGATATACTCCTCCAAGGAGC
TCAAAAGGGCCACAAGGAACTTCTGCTCAGGAAACAAACTTGGACAGGGTTCTTTCGGCTGCGTTTACCTGGTAGGTTTA
GTTGCCAGTTTGGCAGTTTGCACCATAAAAGCTTTGATATTTCCAAGTTCAAACACCACAATATATTTATCCTTTAACAT
GTCTTATGCACCAATCAGTCATTCCAAATAATCCTGAATTATTAGAAAGCGGCAGGTTATACTATTCCTGCCGTAGTGAT
TAGCATCACTGTAGCACTTGGACCAGCTATCAAAATTCAAACAGTAGTGTTTCAAGAGTGCTCAGGCTCTGGTCTGAATT
ATGCAGGGAAAGCTGAAGAATGGTCAGAAAGTTGCCATCAAGGTGCTCTCCTCCGAGTCAAAGCAAGGAACAAGGGAGTT
CTTGAATGAACTGAGTGTCATATCCAGCATAACCCATCACAACCTTGTAAAACTGCACGGCTGCTGCGTCGATGGAGGTC
AGAAAATGCTGGTCTACAATTATCTGGAGAACAACAGCCTCGCAAGGACCCTCTTTGGTATGTTCAACCAAATTTCGATT
TTCATCAGAACTTTGAATCGCTGGTAAATTCATTGCTCTGAACCCCCTGGTTTGTCATGATGTTGTTCAGGCAATGCCCA
CAGTAGTATCCGCTTTGACTGGAGCACAAGGGCGAAGATCTGCATTGGTGTTGCCGAGGGTCTCACATATCTGCATGAAG
AAATCCGGCCACATATCGTCCACCGTGACATCAAGGCGAGTAACATTCTGCTTGACAAGGACCTGAGCCCCAAAATATCA
GATTTCGGGCTAGCAAAGCTCTTCCCAGGCAACATGACGCATATCAGCACGAGGGTTGCAGGAACATTGTAAGCAAAGTG
ACACCTGTTGCTGCTCTCATTTAACCTTGCATATATTGATATATACTGTACTGTGTGGTTAAGACAAGTTGACATATGCT
CATTTCTCAGAGGGTATCTGGCACCGGAGTATGCAATCCGAGGGCAGCTCACAAAGAAGGCTGATGTGTACAGCTTTGGC
GTTCTCCTGCTGGAGATTGTCAGTGGAAGGTGGCACACCGACCCCAGATTGCCTCTCCAAGATCAGTTCCTCCTAGAAAC
GGTAAAGAACAATTTCAATAAATATATGTACTTAATTATGATTCTCTAGAAAGTTCAGAAAAA-ATATCAGGAAAAACAA
ATACGTATTTTCTGTC--------TAGTACAGAATACATCTATGATAGATTCAAGATGTTCCACATCAGACCATGATAAT
CATGCCAGACATATACCTACTATGTGCACATGGTTGAACAATTTAGATAATCACAAGTAGATGCGCATAATATACTTGCC
ACAGTTGGAAGCATTCTTTATTTTTTGATGAAGAGGAAATACAGTTGGAAGTATTCTGAAGGAAAGTACCAGGAAGTTTC
CTCTCTGTCCTGAAAATTACTATTTTTGGTAGTACTGCCAGCTTTCATTGTCTTATCTTAAGATTATTTTTTATTGGCCC
ACTGGTTCTGGATTGGTTTCTGAAAATGTTTTCTATGCCACTTGCATTGACTGGTGTTCTCATTCTTAGGACAT-----A
TCTGTTAG-TTTTGTCCAATTATTATATGCACCTGCTATTGCATTGTAAAACAGCGATTTATGAGAGATCTTTAATCTCT
TACCCTGCAAAGAGAAGTGAAAAGGTTCTATTTCAAAAATAGCTGAAGCATTGTCTCTTGACATTGTCAATAGTAGATTA
AAGAATATAAATCAGAAATATCCACTT-TTTTTGCCAGGCTTGGACACTCTACGAGTCTGGTGATCTTGGGAGCATCATC
GACAGGACCTTAAAAGATGGTTTCAGCACCGACGAAGCTCATAAGTTCTTGAAAATAGGACTCCTGTGCACCCAGGATAG
CCCCAAGGTCAGGCCCTCCATGTCGACAGTCGCCAAGATGCTAAAGGGTGAGTGCCCCGTCGGCGACAAGATCATGAGGC
CAGGCCTGATCACAGATGTCATGGACCTGAAAGTCAGAACAATCGAGCCTGCTCTTCAGTTAAGTGTGTCTCCATCAATG
TCTCCGCTGGATAACCACTCACTGGTGTCTAACCTTGCATCCGCTGGTAGCACTGTGATAAGGGACAGCCCCTGATGAGA
AGGTAAAAAGGCACATGAAGGAGAATATGCTCAGGCAACAATGGCTGTAAATTGGAGGGATGACGAAAAGCATGTCAAGA
GAGGCATTTGATTTCGTTTTGTGTTTCTGGATTGC---TTAGATACACTGTTAGTTGTTTGTATATGTTGCATCTGAGCT
TTTGGTGATCAACAACTGAAGACCCTCAGTGTCCTGTGGAGCATGGCTTATAGGTGAAGGAAGAAGGGCACAGCTACACC
AGGCACCCAAGCAGGGAGCGCTGGACTTACAGAGATTTGCTAGTTAGCACCTTTCCTAAGTTAAGCAAGCAAGCCAGGGT
TACCTTTTTTTGTGTGCACAGAAATACTGTAGTAGCTACAATGTTTAGTCAAGTATACAGTACAAATCTCACACGGATAA
TGACATGACTTGCATCTGCATGAAAGACCTGTGAAATTTCCACCCTGAAATGCCAATAACTCAAACTGATAATATCAAGT
CTTTCGATAAAATACATCAGCAGATTATTGGGGATGATTGTAACAATAAACTGTAAACTGAAACAAGTGAAGATATCTAG
GTACAGAAGTAATTTAAAGATATCTCTTACCAAATAAGGTCTTGAATCTAAGAGGAACCATGGAACTGCAGTTCCAAAAA
TATATATCCTTATAAGAGGAAGCTCAACACTGAAAGCAGGGATTGACAAACGAACCTTCAAAACACTGAAAA-GCACTAT
CAAATTAGTCATGATAAAACCTCACAACATTCCATGTGAAATCACCTTGTAT-GGAATGGTTTCCGCAGCTTGAAGAGTA
CAAGTTAAACCAAACAAACAGTCCGGGTAAGCCTGAGTTAAACAAAAGTACTT---------------------------
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-----------GCTGTCATTTAAAAAAAAATGCACCACAGTAATAACCCAACCATGTCATATTAACAGTTGAACATGGTA
TCACAGCAAAAACTTTCATCCATCTAAACTCCCTCTGTAAACAAATGTAAGACGTTTTAGGTCACTTACATTTGTTTA
>chr5A_1
GGTTTCCTTTTCTCCCTTTTGCTGAAACTACCCGATTTCCCTGGTTAGATTTGTTTTGAGAAAATCAGTTGTTCTAATTT
TTTGGCTTTTGTGTTGCAAATCCATCCAGGGCTGTTTCTCATGAAAACATTTGATTCGCTTCGAGTTCCTTCAGTTGTTG
TGTT---TCTTTAACCATCAAGTTCATCTGATTCTGTTAGAA-GATCTCAGTTGTTGCCTGTTGAACATTTGAAGTTCAG
GGATCATGCTGAAAATGGTTTCCCCCTGTATAGGGACTTTCTTTTCC---------------------------------
--------------------------------------------------------------------------------
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------------------------------------------CATTGATTTTGTTGTTCAGAAGCAGAGTTCTTCACACA
AAATATTCTTCATATGTCCACTAACTATAACCAGCTTACTTAATTTTGTCATTATCTTTTCCCCCTAAGTATGCATAGTG
TATTTTTATTTTCTTTTCCTGCTGCGCCTCAGAGGAAGAAGAAACATACCAGAACTATATGTTTGAGTTATGAGCGGAGT
GCCACGTGTCGTGTCATTTTCCTCTCTTAAGAGGACAT------CTTACCAGCTTAGCTTCTTTGGAGTTAAACCAGAAA
TATATAACTAGCTTCATTTTATGTAGGAAGTTTAAGAGTGAG-TTTTTTTTCTGCGGCTGAAAGTAAAAGGAAAAACAAT
TCCAGTGAGATACTTACATAATTTATTTGGCTATTCTTCTTTACCCTCAGGTTCTTATCGAACTCCTCTTTGCATGAGCT
TCTGAACACATATCTGAAGCTTCTAAGAAGCAAATCCCATACTCTAGCAATGACTTGCTTTCGTTTGCTCTGGTGGAAGA
AAAAATCCAGAAGCCAAATTGTACAGCAGGACTTAGGTAAACCCTGCATATCTCATTTAACTTTTGTTCTTCTGAAGCAT
CCTAAAACCCTTCTGACTCATCCTATTCTGTTAAGACATACCACTCCATGGCAACGTGAAGATATACTCCTCCAAGGAGC
TCAAAAGGGCCACAAGGAATTTCTGCTCAGGAAACAAACTTGGACAAGGTTCTTTCGGCTGCGTTTACCTGGTAGGTTTA
GTAGCCAGTTTGGCAGTTTGCACCATATAAGCTTTGACATTTTCAAGTTCAAACACCACAATCTCTTTATCCCGTAACAT
ATTGTATGCACCAATCAGTCACTCCAAATAATCCTGAATTATTTGGAAGCGGCAGGTTATACTCTTCCTGCTGTAGTGAT
TACCGTCACTGTAGCACTTGGACCAGCTATCAAAATTCAAACACTAGTGTTTCATGAGTGCTCAGGCTCGGGTCTAAATT
ATGCAGGGAAAGCTGAAGAATGGTCAAAAAGTTGCCATCAAGGTACTCTCCTCTGAGTCAAAGCAAGGAACAAGGGAGTT
CTTGAATGAACTGAGTGTCATATCCAGCATAACCCATCACAACCTCGTTAAACTGCACGGCTGCTGCGTCGATGGAGGTC
AGAAAATGCTGGTCTACAATTATCTGGAGAACAACAGCCTTGCAAGGACCCTCTTTGGTATGTTGAACCAAATTTCTATT
TTCCTCAGAACTTTAAATCGCTGGTAAATTCATT-CTCAGAACCCCCTGGTTTGTCATGATGTTCTTCAGGCAATGCCCA
CAGTAGTATCCGGTTTGACTGGAGCACAAGGGCGAAGATCTGCATTGGTGTCGCCGACGGTCTCACATATCTGCATGAAG
AAATCCGGCCGCATATCGTCCACCGTGACATCAAGGCGAGTAACATTCTGCTTGACAAGGACCTGAGCCCCAAAATATCG
GATTTCGGGCTAGCAAAGCTCTTCCCAGGCAACATGACGCATATCAGCACGAGGGTTGCAGGAACATTGTAAGCAAAGTG
ACACCTGTTGCTGCTCTCATTTAACCTTGCATATATTGATATATACTGTACTGTGTGGTTAAGACAAGTTGACATATGCT
CATTTCTCAGAGGGTATCTGGCACCGGAGTATGCAATCCGAGGGCAGCTGACAAAGAAGGCTGATGTGTACAGCTTTGGG
GTTCTGCTGCTGGAGATTGTCAGTGGCAGGTGGCACACTGACCCCAGATTGCCTCTCCAAGATCAGTTCCTCCTAGAAAC
GGTAAAGAACAATTTCAATAACAATATCTACTGAATTATGATTCTCTAGAAAGTTCAAAAATATATATCAGGAAAAACAA
ATA----TTTTCTGTCTAGTACAATAGTATGGAATACAGCTATGATAGATCGAAGATGCTCCACATTAGACCATGAGAAC
CATGCCAGACATATACCTACTATGTGCACATGGTTGAACAATTTAGATAACCACAAGTAGATGCGCATAATATACTTGCC
ACAGTTGGAAGTATTCTTTATTTTT---TGAAGAGGAAATACAGTTGGAAGTATTCTGAAGGAAAGTACCAGGAAGTTTC
CTCTCTGTCCTGAAAATTAATATTTTTGGTAGTACTGCCAGCTTTCATTGTCTTATCTTGAGATTATTTTTTATTGGCCC
ACTCGTTCTGGATTTGTTTCTGAAAATGTTTTCTATGCCACTTGCATTGACTGGTGTTCTCATTCTTAGGACAT-----A
TCTGTTAGCTTTTGTCCAATTATTATATGCACCTGCTATTGCATTGCAAAACAGCGATTTATGAGAGATCTTTAATCTCT
TATCCTGCAAAGAGAAGTCAAAAGGTTCTATTTCAAAAATAGCTGAAGCATTGTTTCTTGACATTGTCAGTAGTAGATTA
AAGAATATAAATCAGAAATCCCCACTTGTTTTTCCCAGGCTTGGACACTCTACGAGTCTGGTGATCTTGGGAGCATCATC
GACAGGACCTTAAAAGATGATTTCAGCACCGACGAAGCTCATAAGTTTTTGAAAATAGGACTTCTGTGCACCCAGGATAG
CCCCAAGGTCAGGCCCTCCATGTCAACAGTCGCCAAGATGCTAAAGGGTGAGTGTGCCGTCAGCGACAAGATCATGAGGC
CAGGCCTGATCACAGATGTCATGGACCTGAAAGTCAGAACAATCGAGCCTGCTCTTCAGTTAAGTGTGTCTCCACCAATG
TCTCCACTGGATAACCACTCACTGGTGTCTAACCTTGCATTCGCTGGTAGCACTGTGATAAGGGACAGCCCCTAATGACA
AGTTAAAAAGGCACATGAAGGAGAATATGCTCAGGCAACAATGGCTGTAAATTGGAGGGATGACGAAAAACATGTCAAGA
GAGGCATTTGATTTCGTTTTGTGTTTCTGGATTGC---TTAGATATACTGTTAGTTGTTTGTATATGTTGCATCTGAGCT
TTTGGTGATCAACAACTGAAGACCCTCAGTGTCCTGTGGAGCATGGTTTATAGGTGAAGGAAGAAGAGCACAGCTACACC
AGGCACCCAAGCAGGGAGTGCTGGACTTACAGAGATTTGCTAGTTAGCACCTTTCCTAAGTTAAGCAAGC----CAGGGT
TACCTTTTTTTGTGTGCACAGAAATACTGTAGTAGGTACAATGTTTAGTTAAGTATACAGTACAAATCTCACACGGATAA
TGACATGACTTGGATCTGCATGAAAGACCTGTGAAAGTTCCATTCTGAAATGCCAATAATTCAAACTGACAATGTCAAAT
ATTTCAATCAAATACGTCAGCAGATTATTGAGGATGATTGTAGCAATAAAATGTAAACTGAAACAAGTGAAGATATCTAG
GTACAGAAGTGATTTAAAAATATATCTTACCGAACGAGGCCTTGAATCTAAGAGGAACCGTGGAACTGCAGTTCCAAAAA
C-TAACATCCT-TAAGAGGAAGCTCAACACTGAAAGCAGGGATTGACAAAAGAACCTTCAAAACACTG-AAA-GCACTAT
CAAATTAGTCATGATAAAACTTCACAACATTCCATGTGAAATCACCTTGTATAGGAATGGTTTCCGCAGCTTGAACAGTA
CAAGTTAAACCAAACAAACAGTCTGGGTAAGCCCGAGTTAAACAAAAGTACTTGCTGTCA--------------------
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-------------------TTAAAAAAAATTGCACCACAGTAATAACCCAACCATGTCGTCTTAACAGTTGAACATGGTA
TCACAGCAAAAACTTTCATCCATCAAA-----CTCTGTAAACAAATGTAAGACGTTTTAGGTCACT------------
>chr5B_707
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---------TTTCTTTTCCTGCTGCACATCAGAGGAAGATG---CACACCAGAATTATCTGTTTGAGTTGTGAGCAGAGC
TCTACCTGTCATACCATTTTCTTCTCTTAAGATGACGT------CTTACCAGCTTAGCTTCTTTGGAGTTGAACCAGAAA
TATGTAACTAGTTTCATTTTTTGTAGGGCATTTAAGAGTGAGTTTTTTTTTCTGCGGCTGAAAGTAAAAGGAAA--CAAT
TCCAGTGAGATACTTACATAATTTATTTGGCTGTTCTTCTTT-CCCTCAGGTTCTTATCAAACTCCTCTTTGCATGAGCT
TCTGAACACATATCTGAAGCTTCTAAGAAGGAAATTCCATACTCCAGCAATGACTTGCTTTCGTTTGCTCCGGTGGAAGA
AAAAATCCAGAAGCCAAATTGTACAGCAGGACATAGGTAAACC-TGCATCTCTCATTTAACTATTGTTATTCTGAAGCAT
CCTAATATCCTCCTGATTCATCCTATTCTGTACAGACGTACCACTCCATGGCAACGTGAAGATATACTCCTCCAAGGAGC
TCAAAAGGGCCACAAGGAATTTCTGCTCAGGAAACAAACTCGGACAGGGTTCTTTCGGCTGCGTTTACCTGGTAGGTTTA
GTTGCCAGTTTGACAGTTTGCACCATAAAAGCTTTGACATTTCCAAGTTCAAACACCACAATCTCTTTATCCTGT-----
-----------CAATCAATCACTCCAAAAAATCCTGAATTATTAGAAAGCGGCAGGTTATACTCTTCCTGCCATAGTGAT
TACCATCACTGTAGCACTTGGACCAGCTATCAAAATTCAAACAGTAGTGTTTCATGAGTGCTCAAGCTCTGGTCTGAGTT
ATGCAGGGAAAGCTGAAGAATGGTCAAAAGGTTGCCATCAAGGTGCTCTCCTCCGAGTCAAAGCAAGGAACAAGGGAGTT
CTTGAATGAACTGAGTGTCATATCCAGCATAACCCATCACAACCTTGTAAAACTGCACGGCTGCTGCGTCGATGGAGGTC
AGAAAATGCTGGTGTACAATTATCTGGAGAACAACAGCCTCGCACGAACCCTCTTTGGTATGTTCAACCAAATTTCGATT
TTCATCAGAACTTTGAATCGCTGGTAAATTCATTGCTCTGAACCCCCTGGTTTGTCATGATGTTCTTCAGGCAATACCCA
CAGTAGTATCCGCTTTGACTGGAGCACAAGGGCGAAGATCTGCATTGGTGTCGCCGACGGTCTCACATATCTGCATGAAG
AAATCCGGCCACATATCGTCCACCGTGACATCAAGGCGAGTAATATTCTGCTTGACAAGGACCTGAGCCCCAAAATATCG
GATTTCGGGCTAGCAAAGCTCTTCCCGGGCAACATGACGCATATCAGCACGAGGGTTGCAGGAACATTGTAAGCAAAGTG
ACACCTGTTGCTGCTCTCACTTAACCTTGCACATATTGATATATACTGTACTGTGTGGTTAAGACAAGTTGACATATGCT
CATTTCTCAGAGGGTATCTGGCACCGGAGTATGCAATCCGAGGGCAGCTGACAAAGAAGGCTGATGTGTACAGCTTTGGG
GTTCTGCTGCTGGAGATTGTCAGTGGCAGGTGGCACACTGACCCCAGATTGCCTCTCCAAGATCAGTTCCTCCTAGAAAC
GGTAAAGAACGATTTCAGTAACAATATCTACTTAATTGTGATTCTCTAGAAAGTTCAGAAAAA-ATATCAGGAGAAACA-
------------------GTACAATAGTACGGAATACAGCTATGATAGATTCAAGATGTTCCACATCAGACCATGATAAT
CATGCCAGACATATACCTACTATG----------------------------------------------------TGCC
ACAGTTGGAAGTAGTCTTTAATTTT---TGAAGAGGAAATACAGTTGGAAGTATTCTGAAGGAAAGTACCAGGAAGTTTC
CTCTCTGTCCTGAAAATTACTATTTCTGGTAGTGCTGCCAGCTTTCATTGTCTTATCTTGAGATTATTTTTTATTGGCCC
ACTGGTTCTGGATTTGTTCCTGAAAATGTTTTCTATGCCACTTGCATTGACTGGTGTTCTCATTCTTAGGACATACAGTA
TCTGTTAGTTTTTGTCCAATTATTATGTGCACCTGCTATTGCATTATAAATCAGCAATTTATGAGAGATCTTTAATCTCT
CACCCTGCAAAGAGAAGTGAAAAGGTTCTATTTCAAAAATAGCTGAAGCATTGTTTCTTGACATTGTCAATAGTAGATTA
AAGAATATAAATCAGAAATATCCACTTGTTTTTCCCAGGCTTGGACACTCTACGAGTCTGGTGATCTTGGGAGCATCATC
GACAGGACCTTAAAAGATGGTTTCAGCACCGACGAAGCTCATAAGTTTTTGAAAATAGGACTTCTGTGCACCCAGGATAG
CCCCAAGGTCAGGCCCTCCATGTCGACAGTCGCAAAGATGCTAAAGGGTGAGTGCGCCGTCAGCGACAAGATCATGAGGC
CAGGCCTGATCACAGATGTCATGGACCTGAAAGTCAGAACAATCGAGCCTGCTCTTCAGTTAAGTGTGTCTCCACCAATG
TCTCCACTGGATAACCACTCACTGGTGTCTAACCTTGCATTCGCTGGTAGCACTGTGATAAGGGACAGCCCCTAATGAGA
GGTTAAAAAGGCACATGAAGGAGAATATGCTCAAGCAACAATGGCTGTAAATTGGAGGGATGACGAAAAGCATATCAAGA
GAGGCATTTGATTTCGTTT-GTGTTTCTATATTGCCAGTTAGATATACTGTTAGTTGTTTGTATATGTTGCATCTGAGCT
TTTGGTGATCAACAACTGAAGATCCTCAGTGTCCTGTGGGGCATGGCTTATAGGTGAAGGAAGAAGGGCACAGCTGCACC
AGGCACCCAAGCAGGGAGCCCTGAACTTTCAGAGGTTTGCTAGTTAGTACCTTTCCTAAGCTAAGCAAGC----CAGGGT
TACC-TTTTTTGTGTGCACAGAAATAGTAGCTACTGTACAATGTTTAGTCAAGTATACAGTACAAATCTCACACGGATAA
TGACATGACTTGCATCTGCATGAAAGACCTGTGAAAAATCCACTCTGAAATGCCAATAATTCAAAATGACAAGGTCAAAT
CTTTTGATCAAATACATCAGCAGATTATTGAGGATGATTGTAGCAATAAAATGTAAACTGAAACAAGTGAAGATATCTAG
GTACAGAAGTAATTTAAAAATATCTCTTACCAAATGAGGTCTTGAATCTAAGAGGAACCACGGAACTGCAGTTCCAAAAA
AATAATATCCT-TAAGAGGAAGCTCAACACTGAAAGCAGGGATTGACAAAAGAACCTTCAAAACACTG-AAAAGCACTAT
CAAATGAGTCATGGTAAAACTTCACAACATTCCATGTGAAATCACCCTGTACAGGAATGGTTTCCGCAGCTTGAAGAGCA
GAAGTTAAACCAAACAAACAGTCCGGGTAAGCCCGAGTTAAACAAAAGTACTTGCTGTAAGAGCAGCCCGGTGCATGTAG
CTCCCGCTTGCGCAGGGTCGGGGAAGGGTCCGACCACTTTGGGTCTATAGTACGCAGCCTTTCCCTACGTTTCTGTAAGA
GGCTGTTTCCAGGACTTGAACCCGTGACCTCATGGTCACAAGGCAGCAGCTTTACCACTGCGCCAAGGCTCCCCTTCAAA
CAAAAGTACTTGCTGTCATTTAAAAAAAAATGCACCACAGTAATAACCCAACCATGTCATATTAACAGTTGAACATGGTA
TCACAGAAAAAACTTTCATCCATCTAAA--------------------------------------------------
>SNPs
--------------------------S------S--SS------S-----S-----------SS-S-S----S---SS--
--SSSS-S-SS--S--------------S--S--------------S---------------S--------SSS--S---
----SSS----S------------------S-------SS-SS-------------------------------------
--S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SS---S---S-----S--S------
--------------------S-----S----------S--------SSS------S-SS-SSSSS-SSSSSSSS-S--SS
--S-S-------S---------------------------S------SSS----------S-----S---S---------
---------S-------------S----SSSS-SSSSSSSSSSS--------S----------SS--------SS-----
--S----S----------S-S-------S-----------------S----S------------S---SSS------SSS
SS--------------------SS-----SS----S------S-------------S--------S--------------
-S----S--S---S-------------------------SS-S----------------S--S-S--S------------
S-----------S-------------------------------------------------------------------
------------------------------------------S-------------------------------------
-------------------S------------------------------------------------------------
-------------------------------------S------------------------S-S--------S------
S-SS-----------------S-----------------------------------------S----------------
--S---------------------------------------------------S-------------------------
--------------------------S-----------------------------------------------------
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----------------------------------------------------------------S---------------
---------------------------------------------------S-----S----------------------
-------------------------------------------------------------------------------S
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-------------------------------------------------S-----------------------------S
-----S--------------------S-----------S-----------------------------------------
---------------------SS----S----------------------------------------------------
---SSSS-----------------------S-------S-----------------------------------------
--------------------------------------------------S-----------------------------
-----------S-------------SSS----------------------------------------------------
-----------------------------------------------------------S--------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
---------------------------------S----------------------------------------------
-----------------------------------------------S--------------S-----------------
-------------------------------------------------------S-----S------------------
--------------------------------------------------------------------------S-----
-----S----------------------------------S--------------------------------S------
--S-----------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SSSS------
-----------------------------------S--------------------------------------------
------------------------------------S------S---------------S---------S---S----S-
--------S---------------------S-----------S-------S-----------------------------
------------------S----------------S--------------------------------------------
S---SSSS-S-S--------------------------------------S-----------------S-----------
--------------------S-----------------------------------------------------------
---------------------------------S----------------------------------------------
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----------------------------SSSS----------------------------------SSSSSSSSSSSS
>forward_761
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---------------------CTGCGCCTCAGAGGAAGAAT---------------------------------------
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>reverse_1972
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---------------------------------------------------TGCCGAGGGTCTCACATATC---------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1121
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCTGTGTTCCGGTGGAAGA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3074
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GCCAGGCTTGGACACTCTAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGCCC
ACTGGTTCTGGATTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3877
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTCCACCCTGAAATGCCAA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
