>input_sequence_33860
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---------------------------ATGTCGACCGTAGCACTGCTCGTA------CCACCACCAACTGCCGCGAGGCC
CCCGGCTCTGCGCTCCCGTCACCCGGCCTTTCTCCAAAGGTAATCCTCCTCCTCATCGAATGTTTCTTTTTTTGAGTGAG
TGCGTCGCGTCTTGTGCCGCTGAGCCAGCAGTGTTGGATTCC----CTCTCTCTCTCTGCAGCACTGCTCCGGACGGAGC
TCCCTTCTCCTGGGGTTCCGGTTCACTCACGGGCTCACAGTAACCCACAGTTCACGGATTCATTTGCTTGTTCGATCTGC
AGATCCTGCAAGCTCGGCTCGTCGCGAGTAACCGCCGCCAT---GTCGTCGTCCGATCCGTCGCTGGCCACCGAGGCGCC
CCAGGCGGCCGTCACCAGCGAGCGGAGGCTCAACCCCGACCTCCAGGAGCAGCTCGCCAAGCCATGTACGTATCTATTCC
TTCTTCGTTCGCCTTGCTCCCGCTGTTCCGAATCCGAGATCCAATGCTTCTCCCCCGTTCCTTCTCGTCGGTTTGGCT--
------AGCGAGGGGGCCGTCGGAGCGGCTGGCCGTTAGCA-----------GCTTCGCGCGACGGCGCTTCCCGCTTCT
CCGGTCGCTGCGCGGGCGCATGAGTGCTCCACCCGGCAATAGCATTTCCATTAGATACGGAGGAAGGGATAGATTTCCAG
CAGGTGTTAACAACATAGC--------------------------TAGACTGTCGTCCTCCATGATCGACGCCTCTGCAC
TCT--GGTACTGTCACTCCATTTGCTACTACCATGAAAGCTTAGACTAGTCAAGCAAGCCGTACCGTCGTCGTCT-----
------------------------CTCTGATCCAAGAACCGTATTCTAACATTCTAGGG----------AGTAATAAACT
CGGCCGCGTTT------------------------------------------------------------CGTTCTCTG
ATGAGGCGTTTCGTCGCCAGGACCATGTTGTATTCATTTTGTGTACTCTCAGCCTCACCTTCAATGAATTAGCC---ACC
AG-AACAAGTGCAATCTACGTTTCCTCCATAAACTCTGCTGTTCTCTTT-TCTCTGAGCTGAGCTCCCGTTTGTT-TTG-
-----TGCAGATCTGGCCAGAGCAATGTCGGCGGTTGACCCGAGCCACCCGGAGGGCAGCAAGGGTCGGGACAGCAAGGG
CATGAGCGTGCTCCAGCAGCACGCCGCCTTCTTCGACCGCAACGGCGACGGGGTCATCTACCCATGGGAGACCTTCCAAA
GTACG---------------------CGCGCATCTCGCTGTCCTTGCCGATTCTGTATCGGTCTCGTGGCACCTGTGTTG
GGCAAGCCGTCAGAATCACGATTTGTTTAATCCCGATCCACCAAACGAGATTAGATTCGCCATTCGCAGAAGAGATTTGA
TTTGCCT---TTCAATTAAAGTAGTAGACACATTTTCTTCTCCAGTCATGGTTGCCTCTGCAGCTGGAGTAAGACCTTTT
TTTGTGTTAATTATTTCAGGCCTCCGAGCAATCGGGCTCGGGTCCCCTTCAGCCTTCGGAACATCCATACTCCTCCACCT
CGTCCTCACTTATCCTACTCAACCGGTAAAAATGTCGTGTTATCATTTGTAATCCCACTGTAAAGAGTGTGATCTAGACG
TGCTTATATTTCTTTACGGAGGGAGTAGTTTTCCTTTTATCTGAATATCACGTCACTCTCTTTTGCAAGTGACGAGAATA
TCTCACTTTTC---------------------------------------------------------------------
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------------------------------------------CAAAGGCACATACGAATTTATCCTCTGTTTCTTTGGAC
GCAGGGATGGATGCCTTCCCCTCTGCTGTCGATCCATATAAAGAACATCCACAGGGGCAAGCACGGGAGCGACTCTGAGA
CGTATGACACAGAAGGGAGGTATGTTTGCAAAACGCACCTATGCCCGTCCTTCTGTACAAAGATCACTTCCGGAAATGTT
CCTAAAAAAAAAGATCACTTCCGGAAATGAATTTTCTAACCAGTTTTTCTTACCGTGCGTGTAGGTTTGAACCAGCGAAA
TTCGATGCTATATTCAGCAAGTTTGGCAAAACTCGGCCAAATGCTTTGTCAGAAGATGAGATTAACGCCATGCTTAAACA
CAACCGCAATATGTATGATTTCCTGGGCTGGTAAGTGCAGCACCGAACTGGCAATC---A--TGTTCTTCACTTATTTTT
GAGTTACTCT----------------AGACAGGCATACCTAATCAGTACACAAGACTAGACTGGAATATAATAT------
----------GCTCTGATAATTTCATTCCAAGTATGTTCCATTCCGAGCCTATCTGTCCTTCGGAAAGTAATTTCTGAAT
ACTTTGTCACTCAATGTCAATGATCTTCTCCACGCAGGGCCGCAGCCAACCTCGAATGGAAGCTGCTGCACAAAGTGGCA
AAGGATAAAGAAGGCTTTTTGCAGCGAGAAATCGTGAGGGGCGCCTTCGATGGCAGCCTGTTCGAGCGCCTGCAGGAGAG
CAAGAAATCTACCTGA----------------------------------------------------------------
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>chr4A_1_TraesCS4A01G064500
GTTTCATGGTCGGTGCAAGAGGCAGTGGTAGTAGTATTATATTGGCAGCAGGCATCCCATGGAACACCGCAAGCCTGGAG
CAGATCTACAGATAGCACTACTCCTACGTGGCTCCCAAAACCTCCACATATATTGGTCGCTCGGGTGGCTAGGAGAACGA
CTATAACGATGAACTAGCGAGCGCGAGCTTGTCATACGTGTGGACAGGG---------CAGCACACCAGGACGCCTGCCC
TGCTCACTCCTCTCCGCCGCATGCACGCACGCACGCACCTTCTAGCGAGACGTTGCGGGCCTTTTGAATGCATTCACGAT
CGGCTTTGAAGACTCGCACTGTAGTAGCAGTACGTGCTCGGATCCGCTAAATATTCTCCTCATCCACGCTGCACGAGAGC
GGATCGCCGTCTCGAACGACACCGCAGTCGCTGGATCGCCCCGGATTTCCCGAACGGAGCGGTTTTCCTCT--GCGATCA
TAAGATAATCATAAGTAC--------------------------------------TAAAA-------------------
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------------AGGAGAGATAAATGGTGCGTGCACGTCCATCCGGCATTACGGTGTACGGGTCGGTGATCTA-CTCTTC
GACCTGGGTGTGTGGCATGTGTGTGCGA-CGTGAAAACGTAGCAAGTTGAGGTAAAAAGCAAGTCTGTTCGAGACC-AAA
AGTTGAGCTAGCATGCAGCTGGGACACGATCGATTTTGGCACGTTAACTCCATTTTGGCACGGTTTGGTGCGTTCCCAGA
AC-------------------------------ACCTTTAACCTTGGCTAATGGCAGTCGCAAACGCCTTGC-------A
TCCATCCAACGG-AAAGCCACGTTTACACGCCCA-----------------CTCCGCTGCTACGAGTTTCTA--GACAAA
ATTGGAATGCAGATGCAGCAGTACGCGTGTAACAACTGCAGTACA-----CGCATCGCCTAAGAAGTCCGCGGTACCATA
CCTCGACCTTGCGCACTGTTTCTACAAAC-CCCCCGTCTCGGCGCCAGCGTCGTGGTTACGAACGTTCCGCACGAGCGTT
TATAAAGAGCGCGCGGGCCTTCTTCCCATGTCGACCGTAGCACTGCTCGTA------CCACCACCAACTGCCGCGAGGCC
CCCGGCTCTGCGCTCCCGTCACCCGGCCTTTCTCCAAAGGTAATCCTCCTCCTCATCGAATGTTTCTTTTTTTGAGTGAG
TGCGTCGCGTCTTGTGCCGCTGAGCCAGCAGTGTTGGATTCC----CTCTCTCTCTCTGCAGCACTGCTCCGGACGGAGC
TCCCTTCTCCTGGGGTTCCGGTTCACTCACGGGCTCACAGTAACCCACAGTTCACGGATTCATTTGCTTGTTCGATCTGC
AGATCCTGCAAGCTCGGCTCGTCGCGAGTAACCGCCGCCAT---GTCGTCGTCCGATCCGTCGCTGGCCACCGAGGCGCC
CCAGGCGGCCGTCACCAGCGAGCGGAGGCTCAACCCCGACCTCCAGGAGCAGCTCGCCAAGCCATGTACGTATCTATTCC
TTCTTCGTTCGCCTTGCTCCCGCTGTTCCGAATCCGAGATCCAATGCTTCTCCCCCGTTCCTTCTCGTCGGTTTGGCT--
------AGCGAGGGGGCCGTCGGAGCGGCTGGCCGTTAGCA-----------GCTTCGCGCGACGGCGCTTCCCGCTTCT
CCGGTCGCTGCGCGGGCGCATGAGTGCTCCACCCGGCAATAGCATTTCCATTAGATACGGAGGAAGGGATAGATTTCCAG
CAGGTGTTAACAACATAGC--------------------------TAGACTGTCGTCCTCCATGATCGACGCCTCTGCAC
TCT--GGTACTGTCACTCCATTTGCTACTACCATGAAAGCTTAGACTAGTCAAGCAAGCCGTACCGTCGTCGTCT-----
------------------------CTCTGATCCAAGAACCGTATTCTAACATTCTAGGG----------AGTAATAAACT
CGGCCGCGTTT------------------------------------------------------------CGTTCTCTG
ATGAGGCGTTTCGTCGCCAGGACCATGTTGTATTCATTTTGTGTACTCTCAGCCTCACCTTCAATGAATTAGCC---ACC
AG-AACAAGTGCAATCTACGTTTCCTCCATAAACTCTGCTGTTCTCTTT-TCTCTGAGCTGAGCTCCCGTTTGTT-TTG-
-----TGCAGATCTGGCCAGAGCAATGTCGGCGGTTGACCCGAGCCACCCGGAGGGCAGCAAGGGTCGGGACAGCAAGGG
CATGAGCGTGCTCCAGCAGCACGCCGCCTTCTTCGACCGCAACGGCGACGGGGTCATCTACCCATGGGAGACCTTCCAAA
GTACG---------------------CGCGCATCTCGCTGTCCTTGCCGATTCTGTATCGGTCTCGTGGCACCTGTGTTG
GGCAAGCCGTCAGAATCACGATTTGTTTAATCCCGATCCACCAAACGAGATTAGATTCGCCATTCGCAGAAGAGATTTGA
TTTGCCT---TTCAATTAAAGTAGTAGACACATTTTCTTCTCCAGTCATGGTTGCCTCTGCAGCTGGAGTAAGACCTTTT
TTTGTGTTAATTATTTCAGGCCTCCGAGCAATCGGGCTCGGGTCCCCTTCAGCCTTCGGAACATCCATACTCCTCCACCT
CGTCCTCACTTATCCTACTCAACCGGTAAAAATGTCGTGTTATCATTTGTAATCCCACTGTAAAGAGTGTGATCTAGACG
TGCTTATATTTCTTTACGGAGGGAGTAGTTTTCCTTTTATCTGAATATCACGTCACTCTCTTTTGCAAGTGACGAGAATA
TCTCACTTTTC---------------------------------------------------------------------
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------------------------------------------CAAAGGCACATACGAATTTATCCTCTGTTTCTTTGGAC
GCAGGGATGGATGCCTTCCCCTCTGCTGTCGATCCATATAAAGAACATCCACAGGGGCAAGCACGGGAGCGACTCTGAGA
CGTATGACACAGAAGGGAGGTATGTTTGCAAAACGCACCTATGCCCGTCCTTCTGTACAAAGATCACTTCCGGAAATGTT
CCTAAAAAAAAAGATCACTTCCGGAAATGAATTTTCTAACCAGTTTTTCTTACCGTGCGTGTAGGTTTGAACCAGCGAAA
TTCGATGCTATATTCAGCAAGTTTGGCAAAACTCGGCCAAATGCTTTGTCAGAAGATGAGATTAACGCCATGCTTAAACA
CAACCGCAATATGTATGATTTCCTGGGCTGGTAAGTGCAGCACCGAACTGGCAATC---A--TGTTCTTCACTTATTTTT
GAGTTACTCT----------------AGACAGGCATACCTAATCAGTACACAAGACTAGACTGGAATATAATAT------
----------GCTCTGATAATTTCATTCCAAGTATGTTCCATTCCGAGCCTATCTGTCCTTCGGAAAGTAATTTCTGAAT
ACTTTGTCACTCAATGTCAATGATCTTCTCCACGCAGGGCCGCAGCCAACCTCGAATGGAAGCTGCTGCACAAAGTGGCA
AAGGATAAAGAAGGCTTTTTGCAGCGAGAAATCGTGAGGGGCGCCTTCGATGGCAGCCTGTTCGAGCGCCTGCAGGAGAG
CAAGAAATCTACCTGAATGTGGCAGTGAGCCGCGTGGAG-------------TCGTCTATAAAACATCTGCACTGGAAAT
TTGGAAAGCCTCCCTGCATTGCAGTTTGAATTGTGTACGTGAAATAAGAAGTGTTTGGCCTGTCTACGGCGGCCTAAACA
TCTTCATTTGTATTGTCATTTTGAACTGGAATTTGTACTGTTATTGGTAGCAGACGGAAGGTGTACAGTGGGACTTTGTA
ATGTGCACTCTTGAATCATCATTACCTTGCATAATATAGGCG--------------------------------------
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-TGTGTTGTCTTTTTATTGTCGTGTGAAGGCGTTTTTTTC-TGAGGGATCGTGTGAAGACTTTCTTAAACTGGGGCCATC
ACTATTGTAAGAAACTTAATCATTTCCGGTTCAACTTTGAGAGATGTGATTTCTTGGATTGCCCTCAAATTTGATACGCT
AAAATATCCTAGGAACAAGGGTAGTAATTGT-------------------------------------------------
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-----------------------TTTTTTTACCGCAAATAAGGCCCTATGTCTATTTTATATTATAAAGGTATTCAATGA
TATATAACATCAAAGAAAGCAAAAAAATTACAACCGT-------GACTTCAGAGAGCCAAACAAACTCAACCTCTAGCAT
GAGCCAAACATGCGCCACCGCGACGGGAAGTTCTCGTGCTAAGGTCCGGATGGACCAATGCCCTCTAGAACAAGCCATCA
TAGAAGCTTTGAGTAGATCCAAGATTCAAAATCGAGCCATCTTCGGTATAAAACATCCGCAAGGTTCGCAACGACGAGGA
GATAACGTTGTTGTCACAAAGAGGAGGAATGAACCACCAAGAAGTGTTCTATCGAGTCAAGGAGTCACCCAAGGGGGGGA
AAAGATTTGACAACATTGTTAGCGCCGGAAAAACAACCGGGGGAACATCGTCCCGATCCCCAAGGGCTGACCATGGACCA
TCCACGTGAATTGCCCATCATGTCTGAATGACCTGAGACGACGCATGCACCGCCTCCCAAACCCAAAAACAACATTCGAG
AGAACCATCAATTCAATGGGAGATTCGG
>chr4B_6
-----ATGGTCGTTGCAAGTGGTAGTG---GTAGTATTATATTG---GCAGGCATCTCATGGAACACCGCAAGCCTGGAG
CAGATTTACAGACAGCA------CTACGTAGATCCCAAAACCTCCACATATTTTGGTCGCTCGGGCGGCTAGGAAAACGA
TTAATAATAACGATAAATGAAAAAGAAAACGGTTAACGAGCGTCGCCCACCGTGTGCACAGCACACCAGGACGCGTGCCC
TGGCCACTCCTCTCCGCCGCAT----GTC----CGCACCTTCTAGCGAGACGTTGCGGACTTTTTGAATTCATTCACGAT
CGGCTTTGAAGACTACT------GTAGCAGTACGTGCTCGGATCTGCTAAATGTTCCCATCATCTACGCTGCACGAGAGC
--------------------------------GGATCGCCCCGGATTTCCCGAATGGCACGGTTGTCCTCT--GCGATCA
TAATGT-----------------------------------------AACTATAAGTAAAA-------------------
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------------AGGAGAGATAAATGGTGCGTGCACGTCCATCCGGCATTACGGTCTACGGGTCGGTGATCTA-CTCTTC
GACCTGGGTGGCTGGGTACTTGGGTCGTCCGTGATAACGTGGCAAGTCGAGGTAAAAAGCAAGTCTGTTCGAGACC-AAA
-CTTGAGCTAGCATGCAGCTGGAACACGATCGATTTTGGCACGTTAACTCCATTTTGGCACGGTTCGGTGCGTTCCCGGA
ACACCTTTAACCTTCTTTCTTTTAGCCGAGAACACCTTTAACATTGGCTAATGGCATTCAAAGACGCCTTGCATCCATGA
TCCATCCAACAG-AAAGCCACGTTTACACACGCA-----------------CCCCGCTGCTACGAGTTTCTA--GACAAA
ATTGAAATGCAGATGCAGCAGTACACGTGTAACCACCACACGCCTCGTCTCTCAGACGTCCACAGT---ACAGTACCATA
CCTCGATCGTGCGCAGTGTTTCTATAAAC-CCC-CGTCTCCGCGCCAGCCTCGTCGTTACGAACGTTCCGCACGAGCAAT
TATAAAGAGAGCGCGGGCCTTCTTCCCATGTCGACCGTAGCACTGCTCGTA------CCACCACCAACTCTCGCGAGGCC
CCCGGCTCTGCGCTCCCGTCACATCGGCTTTCTCTCAAGGTAATCATAGTCGTCGAATTCTTTTGCGAGT----------
------GCGCCTTGTGCTGCTGAGCCAGCAGTGTTGGATTCCCTCTCTCTCTCTCTCAGCAGCACTGCTCT----GAAGC
TCTCTTCTTCTGGGCCGG-GGTTCACTCACGGACTCACAGTAACCCACAGTTCACAGATTCATTCGCTTGTTCGATCTGC
AGATCCTGCAAGCTCGGCTCGTCGCGAGTAACCGCCATGTCGTCGTCGTCGTCCGATCCGTCGCTGGCGACCGAGGCGCC
CCAGGCGGCCGTCACCAGCGAGCGCAAGCTCAACCGCGACCTGCAGGAGCAGCTCGCCAAGCCATGTACGTATCTATCCC
TTCTTCACCTTGGGCAG--CCGCTGTTCCGAATCCGAGATCCAATATTTCTCTCCCGTTCTTTCTTGCCGGCTTGGCTAG
CGACTGAGCGAGGGGACCGTCAGAGCGGCTGGCCGTTGCCCGTTAGCGGGCGGCTTCGCGCGACGGCGCTTCCCGCTTCT
CCGGTCGCTGCGTGGG---------------------------ATTTTCATTAGATACGGAGGAAGGGATAAATTTCCTG
CAGGTGTTAACAACATAGACTGTCTTTCCGGGAAAAAAAAGAGCATAGACTGTCGTCCTCCATGATCGTCGCCTCTGCAC
TCT--GATACTGTCACTCTATTGGCTG---CCATGAAAGCTTAGACTAGTCAAGCAAGCCGTACCGTCGTCGCCT-----
------------------------CTCTGATCCAAGAACCGTATTATATTCTAAC---------ATTCTAGCAATAAACT
CGGCCGCGTCGACCGTGTTTGATGAGGGAATATCGTCTCTGTTAGCGACCCGAATGCATTGAATAC-TTTCCGTTCTCTG
ATGAAGCGTTTCGTCGCCAGGACCATGTTGTATTAATTTTGTGTACTCTCAGTCCCATCTTCAATGGTTTAGCC---AGC
AGAAACAAGTGCTATCTACGTTTGCTTTATATAATAAATTCTTGCTGCTGTCTCTGAGCTGAACTCCTATTTGTACATAT
ACATATGCAGATCTGGCCAGAGCAATGGCGGCGGTTGACCCGAGCCACCCGGAGGGCAGCAAGGGGAGGGACACCAAGGG
CATGAGCGTGCTCCAGCAGCACGCCGCCTTCTTCGACCGCAACGGCGACGGGGTCATCTACCCATGGGAGACCTTCCAGA
GTACGTATACGTAGCTCTGACGAGAGCGCGCATCTCGCTATCATTGCCAATTTTGTATCAGTCTCGTGGCTCTCGTTTTG
GACAGGCCGTCAGAATCACACTTTGTTTAATCCCGATCCACCAAACGAGATTAGATTCGCCATTCCCAAAAGAGATTTGA
TTTGCCT---TTAA--------AGTGGACATATTTTCTTCTCCAATCAAGGTTACTTCTGCAGCTGCAATAAGACCTTCT
TTTGTGTGC--TATTTCAGGCCTGCGAGCAATCGGGCTTGGGTCGCCTTCAGCCTTCGGAACATCCATACTCCTCCACCT
CGTCCTCACTTATCCTACTCAACCGGTAAAAAAGTCGTGTTATCATTTGTAC----------------------------
-------------------------TAGTTTT--TTTGACCTGAATATCACGTCACTCTCTTTTGCAAGTGACAAGAATA
TCTCACTTTCTCTAAGGCCAACTCCACCGCGTGACCCATTTCTACCCCAAATCGTCTGTTTGTGTCCGTTTGGGATAAAA
CCGACAAACCGAACGACCCAACACATGGGAGCATACGGACGTTTCGTCCGGTCTGTGTCCGCTTTTGCCTCATTTCCAGA
CCAAAGTTGCTCTCGGTTTGGGTTTGGGGTCAAAGCGGACAGAAAGCGGACGTCTTCACGTCCTCCTCGTCCGTGTCCGC
CCTCGCCCCCACCTGTCACTCTCTTCTTTTCTGTACCTGGCCCACCACGTGCACCCACCACGGACAAAATCCGGACAAAA
TATGGTGGGTGCAGCAAGTTTGTCCGACCTCTGTCCGGCGTTTGTTTTCCTTATTTCTACCCCATACAGACAAAATTCGA
ACAAAATGGGGTAAAATTTAGGGTCGTGCGGTGGAGTTGGCCTAAAGATACACACGAATTTATCCTCTGTTTCTTTGGAC
GCAGGGATGGATGCCTTCCCCTCTGCTGTCGATCCATATAAAGAACATCCACAGGGGCAAGCACGGGAGCGATTCTGAGA
CGTATGACACAGAAGGGAGGTATGTTTGCAAAACGCACCTATGCATGTCCCTCTGTAGG---------------------
----------AAGATCACTTCCGGAAATGAATTTTGTAACTAGTTTTTCTTCCTCTGTGTGTAGGTTTGAACCAGCGAAA
TTCGATGCTATATTCAGCAAGTTTGGCAAAACTCGGCCAAATGCTTTGTCAGAAGATGAGATTAACGCCATGCTTAAATA
CAACCGCAATATGTATGATTTCCTGGGCTGGTAAGTGCGGCGACGAAGTGGCATTGGCAAGTTGTTCTTCATTTATTTTC
GTATA--TATCCAAACTTTTCTAAAAAGACAGGCATGCCTAGTCAGTGGCTCAGTACACAAACACAGGACCAGATTTTTC
ATTCCTGCAAGTTCTGTTCATTTCA---------------------AGCCTAGCTGTCCTTCAGAAAATAATTTCTGAAT
ACTTT-----------------ATCTTCTTCACGCAGGGCCGCGGCCAACCTCGAATGGAAGTTGCTGCACAAGGTGGCA
AAGGATAACGAAGGCTTTTTGCAGCGAGAAATCGTGCGGGGCGCCTTCGATGGCAGCCTGTTCGAGCGTCTGCAGGAAAG
CAAGAAATCTACCTGAATGTGGCAGTGAG---------------------CCTCGTCTCTAAAATATCTGCACTTGAAAT
TTGAAAAGCCTCCCTGCATTGTAGTTTGAGTTGTGTACGTCAAATAAGAAGTGTTTGGCCCGTCTGCGGCGGCCTAAACA
TTTTCATTTGCATTGTTATTTTGAACTGGAATTTGTATTTTTATTGGTAGCGCACAGAAGGTGTACAGTGGAACTT-GTA
ATGTGCACTCGTGAATCATCATTACCTCGCATAATATAGGCGTGTC----------------------------------
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--------TCTTTCTATTGTCGTGTGAAGACATTTTTTTC-TGAGGAATCGTGCGAAGACTTTCTTAAACTGGGGCCATC
ACTATTGTAAGAAACTTAATCATTTCCGGTTCAAGTTTGAGAGATGTGATTTCTTGGGTTGTACTCAAATTTGATACACT
AAAATATCCTAGGAACAAGAATATCATGTGGGGAATAAGAATATCTTTTCTTTTGAGCTCTCGTGGTTTGATAGAGAAGG
GTTCTTTGAGATGGTTGCTAGAGAATGGGCGAAAGATTCAGGAGGAAGGTCTCCTATCGAGAGATGGTAGAATAAGATTA
GACATCTGCGAAGTTTTCTGCGTGGATGGGCTAAACATACGCATGGTATTTATAAGGCTGAGAAGGAAAGACTCCTTTTA
CTTATTCAGTCCCTAGACTTAAAAGCCGAATCCACTATTTTAGATACCAGAGAGCCGGAAGCTAAGGTAGAGGCGGAATT
AAGGCTGAAAGATATCCTTCGGGAGGAGGAATTGAAGTGGAGGAGGAATTGAAGTGGGCATTGCGAGCTAAGGTTCGCAA
GATCGTCCAAGGGGATGACAACACTTAGTTATTTTATATGATTGCCAATGGCAAGCACCGCAAGAAGAGGATATTTCAGC
TCGAGCAGGAAGAGGGGACGATTGTAGGTCAAGAGAATCTGAAAGTCTATATTACGAATTACTATAAGCAGCTGTTTGGG
CCGCCGGAAGATAACTATGTGTCCTTAGATGAGACCAGAGTTGAGGATGTACCTCAACTTGCGTCGGACGAGAATGGAGT
CTTGACTGCCCCTTTTACGAAGAAAGAGGTGTTTGAGGCTATTTCACAAATGAAGAACAATAAGGCTCCCGGGCCGGATG
GCTTCTCGGCGGAGTTTTATAAAAAATGTTGGCATATCATCAAAGGGGACTTACTCCCGATGTTTCATGATCTTTTCTCT
GGACAGCTTCAGTTGTTTCAACTTAATTTTGGAACGATTACTTTAATCCCCAAGAAGACAGAGGTTGTTCGTATTGAGCA
GTTCAGGCCCATCTGTCCTCTTAATGTAAGTTTCAAAATTTTCACCAAGGTCGGAACTAATATACTTACGCAGATTGCGC
ATTCTGTTGTGCAGCCGTCCCAAACTGCTTTCATGCCAGACAGAAACATCCTGGAAGGGGTTATCGTTCTGCATAAAACA
CTCCATGAAATCCACTCAAAAAAACTAGATGGAGTAGTTTTCAAAGTGGACTTTGAGAAGGCATACGACAAGGTCAAATG
GCCATTCCTTCAGCAGGCTTTGCGCATGAAAGGTTTTGATCAGGCCTGGAGACACCAGGTAGACTCCTTCACCCAAAAAG
GGAGTGTTGAAATTAAAGTGAATGATGACATAGGTCACTATTTCCAAACACACAAAGGACTGAGGCAAGGGGATCCGATG
TCTCCTATTCTCTTCAGCATAGTGGCTGATATGTTGGCAATTCTTATAGGAAGGGCCAAGGATGCAGGTCAGGTAGGAGG
CCTCGTCCCGCACTTAGTAGACGGAGGTGTATCCATTCTACAGTATGCCGATGATACTATCATTTTCATGAAGCATGACT
TGGCAAAAGCTCGCAACATGAAGCTCGTGCTATGCTTGTTCGAACAATTGTCCGGGTTAAAGATTAACTTTCACAAGAGC
GAGTTGTTCTGTTTTGGAAGAGCTAATGATGAACAAGATGCGTACACGCAATTGTTCGGGTGTGAATTGGGGGCTTTACC
TTTTATGTATTTAGGTATACCAATTCACCATCGTAAGCTCACCAACAAAGAATGGAAGTGCATTGAGGATCGTTTTGAGA
AGAAATTGAGCTGCTGGAAAGGTAAGCTGATGTCATACGGAGGACGATTAATTCTTATTAATCCAGTCCTCACGAGCATG
CCCATGTTTCTTCTCTCGTTCTTCGAGGTTCTGGTGGGAGTCTGGAAGGGGCTTGATTTCTATCGATCACAATTCTTTTG
GCAGAGTGATGGAGTTAAGCGAAAATACAGACTTGCTAAATGGGACATCATCTGTAGGCCGAAAGACCAAGGGGGCCTTG
GTATTGAGAATCTGGAAATGAAGAACAGATGTCTCCTTAGCAAATGGTTGTTTAAGCTTTCTGTCGAGACGGAGGCTACT
TGGGCTCAGATCTTGCGGAACAAGTACCTTCACTCCAGAACCTTGTCCCAGGTGACAGTGAGACCGACTGATTCGCCTTT
TTGGAAAGGATTGATGAGAGTTAAATCACACTTTTTCAATAGAACAAGATTCTTAGTTGGAAACGGTACTTCTACGAGGT
TTTGGGAGGATACATGGCTAGGGGAGACGCCCCTTGCACTCCAATATCCTTCCTTGTATAACATTGTTCAGCGTAGAGAT
GCTAACATTGCAACAGTGATACAGTCCATTCCGCTTAATATCCAGTTTAGGAGGACGCTAGTGGGAACCCGTTGGGAAGC
TTGGTCCATCTTGTTCGAAGATTAATGGATGTTCAGCTGTCTCAACTGCCCGATCAATTGTGTTGGAAATTATCCAAGAA
TGGCGAATTTTCGGTTAAATCCATGTATTTGGATGTTATCAACTCTAGCGTGATTCCTTGATCGAAACATGTTTGGAAAG
TCAAAGTTCCTTTAAGAATCAAAGTGTTTATGTGGTTTGTGCATAAACAAGTTATTTTAACGAAGGATAATTTAGCAAAA
CGCAATTGGACAGGATCTACCAGATGTAGTTTCTGCGACCAACACGAATCCATCAAACATCTCTTTCTGGATTGTCCCTT
AGCAAAAAATTTGTGGCGGTCGGTCCACATAGCTTTTAACATTACACCACCGAATTCCATCAATACGTTATTTTGGACGT
GGCTTGATGGGATAAATTTTGATACAGCGAGACACATTCGTGTGGCAGTGTGTGCTTTATTATGGGCAATCTGGAATTGC
AGAAATGATTTGGTTTTTAACAGAACAACAAATATTCATTTTTTGCAGGTTATATTGAGAGCCACTGCGTTGATCCGTAT
GTGGTCGCTACTCACTTCGACGGAGGCCAGGGAGCATTTGGTTACTGCGTCTACCCGATGGGAGATGGTAGCACGGGGTA
TTTTCAACCGGTTTGGATGGCGGTCATGTAATAGGATAGGCATGTAGTGCTCTTATCTTTCTATGCCTGCCGGTTGTGGC
TTTTCCTTTTTCTCTGTTCAGCTCTAGTGGAGCCTTTTACCTTTTTGTTCGAGACTTGGAGTCCTTTGTTGGATATTTTG
CTCATTAATAATATGAGCCATATGCATCATTCAGATGCATAGGTTGGGGTATCCCCTTTTCGAAAAAAAGAAAAAAAACT
CCTAGGAACAACCATAGTGATTATTATTTTAATGCAAGTAAGGCCCTATGTTTATGATTATATTAAAGGCATC-CAATGG
TATATAACATCCGAGAAAGCAAGAAAATTACAACCATATCTTCAGAGTTCAAAGAGCCAAACAAACTCAACCTCTAGCAT
GAGTCGAAGGTGCGCCACCG------------------------------------------------------------
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>chr4D_28
---------------------------GTACTAGTATTATATTG---GCAGGCATCTCATGGAAGACCGCAAGCCTGGAG
AAGATCTACAGATAGCACTACTCCTACGTGGATCCCAAGACCTCCACATATTTTGGTCGCTCGACCGGCTAGGAGAACGA
TTATAACGATGAACTAGCGAGCGCGAGCTTGTCATACGTGTGGACAGGG---------CAGCGCACCAGGACGCGTGCCC
TGCTCACTGCTCTCCGCCGCAT----GCACGCACGCACCTTCTAGCGAGACGCTGCGGGCCTTTTGAATGCATTCACGAT
CGGCTTTGAAGACTCGCACGGTAGCAGTAGTACGTGCTCGGATCAGCTAAATATTCTCCTCATCCATGCTGCACGAGAGC
AGATCGCCGTTTCCGCCGGCGTCGCAGTCGCTGGATCGCCCCGGATTTCCCGAATGGAACGGTTCTCCTCTCCGCGATCA
TAAATAGGGCCTGTTTGCTTTTAATAAGAGTTCCAAATAAGTCATCAAACTATAAGTCGAAAAGTGAAAAAAAGTGACTT
ATTTTGCCAAACAGACCCAACTTATAAGTCATCCTAACTTATAAGTCATAAATTGTTCCACCCAAACTTAAAACTTATAA
GTCACCCCTTTTTACGTGGGTCCCAACACCTTTACATAAAAGAACAAGATGAGAAGGTGTGATCAGGTGACTTATAAGTC
AGGTGACAACCAAACAGGCGTGACTTATAAGTCACTGGTTTTCGACTTATAAGTTGGTGACTTATTTGGAATCAAACAGG
CCCTAAAGAACGAGGAGAGATAGATGGTGC-TGCACGCCTATCCGGCATTACGGTGTACGTGTCGGTGATCTACCTCTTC
GACCTGGGTGGCTGGGTACTTGGGTCGTCCGTGATAACGTGGCAAGTCGAGGTAAAAAGCAGGTCTGTTCGAGACCAAAA
-GTTGAGCTAGCATGCAGCTGGAACACGATCGATTTTGCCACGTTAACTCCATTTTGGCACGGTTTGGTGCATTCCCAGA
AC-------------------------------ATCTTTAACCTTGGCTAATGGCGTCCGCAGGCGCCTTAC-------A
TCCGTCCAACGGAAAAGCCACGTTTACACGGAACACCCGCTCCAGTCCGGTCCCTGCTTCTACGAGTTTCTCTGGACAAA
GTTGAAATGCAGATGCAGCAGTACACGAGTAACCACCACACGCCACGCCTCGCCTCGCCTAAGAAGTCCACAGTACCATA
CCTCGACCATGCGCACGGTTTCTACAAACGCCC-CGTCTCCGCGCCAGCGTCGTGGTTACGAACGTTCTGCACGAGCGTT
TATAAAGAGAGCGCGGACCTTCTTGCAATGGCGACCGTAGCACTGCTCGTACCAGTGCCACCACCAACTATCGCGAGGCC
CCCGGCTCTGCGCTCCCGTCACCTCGGCTTTCTCCCAAGGTAATCATCATCGTCCAATTCTTTTGCGAGT----------
------GCGCCTTGTCCCGCTGAGCCAGCAGTGCTGGATTCC----ATCTCTCTCTCAGTAGCACTTCTCT----GGAGC
TCCCTTCTCCTGGGCCGG-GGCTCACTCACGGACTCACAGTAACCAACAGTCCACAGATTCATTTGCTTGTTCGATCTGT
AGATCCTGCGAGCTCGGCTCGTCGCGAGTAACCGCCGCCAT---GTCGTCGTCCGATCCGTCGCTGGCGACCGAGGCGCC
CCAGGCGGCCGTCACCAGCGAGCGCAAGCTCAGCCCCGACCTGCAGGAGCAGCTCGCCAAGCCATGTACGTATCCCCTCG
----TCTCCTTTGTCGG--CCGCTGTTCCGAATCCGAGATCCAATGCTTCTCTCCCGTTCTTTCTCGCCGGTTTGGCCAG
CGAG-------GGGGGCCGTCGGAGCGGCCGGCCGTTGCCCGTTAGCGGGCGGCCTCGCGCGACGGCGCTTCCCGCTTCT
CCGGTCGCTGGGCGGGTGCATGGGTGCTCCACCCGGCAGTAGCATTTTCATTAGACACGGAGGAAGGGGTAAATTTCCTG
CAGGTGTTAACAACATAGG------------------------------CTGTCGTCCTCCATGATCGACGCCTCTGCAC
TCTCTGGTACTGTCACTCTGTTTGCTACTACCATGAAAGCTTAGGCTAGTCAAGCAAGCCGTACCATGAAAGCTTAGACT
AGTCAAACAACATAGGCTGTCGTCCTCTGATCCAAGAACCGTATTCTAACATGAGATGATGAGAATTCTAGTAATAAACT
CGGCCGCGTCGACCGTGTTTGATGAGGGAATATCGTCTCTGTTAACGACCCGAATGCGTTGAATACTTTTCCGTTCTCTG
ATGAAGCGTTTCGTCGCCAGGACCATGTTGTATTAATTTTGTGTACTCCCAGTCCCATCTTCAATGAATTAGCTACTACC
AG-AACAAGTGCAACCTACGTTTCCTTAATAAATTATGCTG------------CTGAGCTGAGCTCCCGTTTGTTGTTG-
-----TGCAGATCTGGCCAGAGCAATGGCGGCGGTTGACCCGAGCCACCCGGAGGGCAGCAAGGGTCGGGACACCAAGGG
GATGAGCGTGCTCCAGCAGCACGCCGCCTTCTTCGACCGCAACGGCGACGGGGTCATCTACCCATGGGAGACCTTCCAAA
GTACG---------------------CGCGCATCTCGCTATCCTTGCCAATTTTGTATCCGTCTCGTGGCACCCGTGTTG
GACAAGCCGTCAGAATCACGATTTGTCTAATTCCGATCCACCAAACGAGATTAGATTCGCCATTCGCAAAAGAGATTACA
TTGCCTTTGATTGA--------AGTAGACATATTTTCTTCTCCAATCATGGTTACCTCTGCAGCTGGAGTAAGGCCTTCT
TTTGGTG---TTATTTCAGGCCTCCGAGCAATCGGGCTTGGGTCGCCTTCGGCCTTCGGAACATCCATACTCCTCCACCT
CGTCCTCACTTATCCTACTCAACCGGTAAACAAGTCGTGTTATCATTTGTACTCCCACTGTAGAGTGAG----CTAAACG
TGCTTATATTTCTCTGCGGAGCAAGTAGTTTT--TTTTACCTGAATATCACGTCACTCTCTTTTGCAAGTGACAAGAATA
TCTCACTTTTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------TAAAGACACATACGAATTTATCCTCTGTTTCTTTGGAC
GCAGGGATGGATGCCTTCCCCTCTGCTCTCGATCCATATAAAGAACATCCACAGGGGCAAGCACGGGAGCGACTCTGAGA
CGTATGACACTGAAGGGAGGTATGTTTGCAAAACGCACCTATGGCTGTCCCTCTGTAGA---------------------
----------AAGATCACTTCCGGAAATGAATTTTGTAACTAGTTTTTCTTACTCCGTGTGTAGGTTTGAACCAGCGAAA
TTCGATGCTATATTCAGCAAGTTTGGCAAAACTCGGCCGAATGCTTTGTCAGAAGATGAGATCAACGCCATGCTTAAACA
CAACCGCAATATGTATGATTTCCTGGGCTGGTAAGTGCTGCGCCGAATTGGCACTGGGAA--TGTTGTTCTTTTATTTAT
TTGCGTGTATCCAAACTTTTCTAAAAAGACAAGCATGCCTAGTCAGTACACAAACTGACAAACACAAGACCAGATTTTTC
ATTCCTGCCAGCTCTGTTCATTTCA---------------------AGCCTAGCTGCCCTTCAACAAGTAATTTCTGAAT
ACTTATCACC-------CAATGATCTTATTCACGCAGGGCCGCAGCCAACCTCGAATGGAAGCTGCTGCACAAAGTGGCA
AAGGATAAAGAAGGCTTTTTACAGCGAGAAATCGTGAGGGGCGCCTTCGATGGCAGCCTGTTCGAGCGCCTGCAGGAGAG
CAAGAAATCTACCTGAATGCGGCAGTGAGCCGTGCGCAGTCCAGACCGAGCGTCGTCAATGAAACATCTGCACTTGAAAT
TTGAAAAGCCTCCCTGCATTGTAGTTTGAGTTCTGCACGTCAAATAAGAAGTGTTTGGCCCGTCTACGGCGGCCTAAACA
TTTTCATTTGTATTGTTATTTTGAACTGGAATTTGTACTGTTATTGGTAGCGCACACAAGGTGTACAGTGGAACTTTGTA
ATGTGCACTCGTGAACCATCAGTACCTCGCGTAATATAGGCGTGTCCGAAAATCCATCTCTGCACCCGAGCTCATCTGCA
CTTTCTGCACCCGAGCTTATCTGCACTTGTGCTTACGGAAAAAAATCAAAACAAATACTAGAAAAATCCAAACAATTCTA
ATTTTTTTGTGGGGTAGAAAATTTGATGCGTGAGGCCCGCTCCAAATTTCAAGTCATTTGGACGTTTGATCAGCTCTCAG
CAAAAAAGATAAATTGGGGGTCTTTAAAAATGTTTACTGTTCATGTACTGTTTTGACCCGATTTGTCTTTTTTGTTGAGA
GCTACTCAAATGTCCAAATGACTTGAAATTTGAAGCCGGCCTCACGCATCAAATTGTCTACCGCACATAAAAAATTTGGA
ATTTTTGGAATTTGTTTTGATTTTTTTATGAATTTTTTCTAACCGGATACATATGAGCCTGAGCACCGAAGCACCCTATT
CTGTGTTGTCTTTTTATTGTCGTGTGAAGGCGTTTTTTTCATGAGGGATCGTGTGAAGATTTTCTTAAACTGGGGCCATC
ACTATTGTTCGAAACTTAATCATTTCCAGTTCAACTTTGAGAGATGTGATTTCTTGGAT-----TCAAATTTGATACACT
AAAATATCCTAGAAACAAGGGTAGTAAT----------------------------------------------------
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>SNPs
SSSSS-------S------S--S---------------------SSS---------S-----------------------
-------------------------------S-------------------S-------------S--------------
S-------------------------------------------------------------------------S-----
----------------------SSSS------------------------------------------------------
-------------------S------------------------S-----------------------------------
S---------S--SSS--S-SS--------------------------------S---S-----S---------------
---SS-SSS-S-SSS-S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------SS---SSSS-SS-SS--S------S-----S------S--------------------------------
S---------------------S---------------------------------------------------------
--------------------------------------------------------S-----S-----------------
-------------------------------S--------------------S---------------------------
----S-------------------S--------S--SS--SSS--------------------------S-S--------
--------S------------------------S------S---------------------------------------
---------S-----------------------------------------------------------SS---------
-----------------------SS-S--------S---------S--S--S--SSSSSS-S--S-SSS-SSSSSSSSSS
SSSSSS---S-----------------------------------------------S------------SSSSS-----
--------------SSSSS-------------S----------------------S------------------------
--------------------------------------------------------------------S-----------
------------------------S-S---------------S-------------------------------------
------SSSSSSS-S-SSS---------------------------------S-------S------S------------
-------------------------------------SS-S---------------------------------------
----------------S-----S---------------S--------S-----------------------S------S-
------------------S-------------------------------------------------------------
------------------S-----------------------------------------------------S-------
----------------------------------------------------SSS-S-S---------------------
---------SS---------------------------------------------------------------------
----S-----------------------------S-----------------S-S--S----------------------
--------------------------SS-----S-S-------SSSSS--------------------------------
---------------------------S---------------------------------------------S------
--------------------------------------------------------------------------------
---------------------------------------S--------S---S------S-------------S------
-S------------------------------------------------------------------S-----------
------------S-SSSSSSSS--------S-------------S--------S------------------------S-
-------SSS----------------------------S-----S-----------------------------------
--------------------------------S------------------S----------S--S-S-SSSS---S---
-------------S-S-----SS---------SS-----S---------------------------------S------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S----S--------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----S------S-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS-------------------------S----S------------SS--S----------------------
--------------------------------------------------------------------------------
--------------------------------------S--S-----S-----S-S---------------S--------
-S--SSS-S---------------------------S----S------------SSS-S-SSSSS-SSSSSSSS------
----------------S-S------SSSSSSSSSSSSSSSSSSSSS------S---------S-----------------
-----SSSS-SSSSSSS------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-S-S-------------------------------------S-----
---S-----------------S-------S----------S-------------------S-------------------
-S--------------S----------------------------------SS--S---------------S--------
----------S----------------S----------------------------------------------------
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-------------------------------------------------------------SS--------------S--
------------------------------S-------------------------------------------------
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-------------------------S-----SS----S-------------S---SS-SSSS-SS--S-SSSSS-----S
-----------SS---------S------------S----------S----S----------------------------
---S-S--SS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1242
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----------------------ACGCGTGTAACAACTGCAGT--------------------------------------
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>reverse_2934
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-----------------------------------------------------GCCTCTGCAGCTGGAGTAAG-------
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>forward_2048
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----------------------------CCACCCGGCAATAGCATTTC--------------------------------
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>reverse_4613
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----------------------------------------------------GACGGAAGGTGTACAGTGGG--------
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----------------------------
