>input_sequence_33671
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--------------------------------------------------------------ATGGCCACCGTCGCGGCG
ACCATGGCGG------CGCCGACGCGCCACCGCCAGTTCCGCGTGCGCGCCGCCTGGGACATGAATCCGGGCGCCGCCAC
CGTCGCCGTGCCGAAGCCTTCAAAGGCCAAGCCCAAGCCCGCCCTGGGGCAGTCGCCGGCGACGGCGACCACCCCGGCGC
GCGCGCCCCCTCCCACGCACGCCGACCTCTTCGCGCGCAGCAGCGAGGGCCAAGGTATCTGTCTG----TCCTCCCTCAG
CTCTGCCATCCCGGCCATTTGCTCCACGTTCTAATCCCCTGAAGCTCTGGCAGCATATGCTGTCAGTGAACAACTGGAGG
CAGTTGGTATCAGGCAATTACATACAGAACTG---------------------------------GTCATCGAGA-----
-------------------------ACTTGACGAAAACTAGTTCCATATCGCTGTGCCTGCTCT--------AGTTTTAG
GGCCGTGTAGTTACTACACTATTTAGCCAGAGAAGTTTGTAATTCTGTCAATTGATTGTTGGTTGCTTCGTATTAGCAAA
GAAGAGCACATACATGGGGTTTGAGAAGTGGTGGTTGCCGCCCGCGCCAGAGGTGAAGAAGCCCCGTTCACTCTACAACG
CGGCATCGCTGGCATACTTGGGGGACTGCATATATGAAGTGAGAATTGGTCATTTTGTTCTTTGGTCTTTATGCATTTTA
CAGTTACTGTTATGTAGTTACTATATTACATGTAGCTCAACATAGCTGTCCCTTTTGACCTTCATTTGCTCTGGGTTTAC
TATATGATGTTCCTGACGGTGCTGAGACAATGTGTACTAGTTTT--CAACTCCAAGCTTGTTTGTTGTGAGAGAGATCTG
ACTCTTGCTCTTTGTGATACAGCTCTATGCTCGGAGACACTTCTTCTTTCCTCCACTGAGCATCAATGAATATAATAAGC
GTGTGATGGATGTTGTGAAATGTGAATCACAGGTCTGATATGGCTCTTCTTTATCCTCTGATCAAACAGCTTACATAGAC
TAAATGCTTCAGTATGGTATGTTCGTTGATTGTGATGTAGAATTTATCTTTATCATCTATGTTTATCTATTGTATCATAG
CCTTCATATTAACA-TTTTCCGCACATATCAATAGGTTTTGTCTCCTAATGTTGTTTCAATTACTGCTATTTT-AATGGC
TGTAGTTCAATTTCTGAAGAGCACTCGTTTTGTTTGCCTTTTCTCCCTTCTGTTTGCTGCATATAAGAGAGTGCTTTGAA
GCATCACAATGTCAGGCATATTTTCACATCAATTGTCATTTGTTTCCTTCCTTCAGGATCTGCTGCTGAACAAACTCCTG
GGAGAGGATTTTCTAACTGAAGAAGAAAGGTAAATCTAGTTAATCTACCTTTCTTCTTCCGTCTTCGATGTGTGTCTTGT
ACCTACTTGTTTCATAATATGATACATGCAGCTTTCTTGCATATTCTCGAAGAAAAAAAGTAAAGCTATGTTTCTAGCAT
TTTACTGCCTACTACTCCCTCCGCTCCGAATTACTTGTCTTGGATTTGTCTAGATACGGATGTATCTAGACTCATTTAGT
GCTAGATACCTCCGTATCTAGACAAATCCAAGACAAGTAATTCGGAACGGAGGGAGTAGGAAACACTATGCACTAGCCTC
TATACACATGATTGAACTTCCATGCGGTGTTAGTGCATCAGTATTTAGGACGTATGAATTCATCTTCCTAGAGTTGCCTT
TGTACTGCGCCACGTTTCTTTTCTCTGCATTATATAGAATATGAACAAATGTAGTATTGTTTGATGCTTTCTCATCTGTC
TAGTACCTGTGACCTGTGAGTTACTTAGATAATCATGTTCTGTAGGGACATACTTCGTTGGGGAAGGAACATCGTTAGCA
GCAAAACTCGTACAAGAAAACGGGCAGGAATTGCAGTGTACAATCGAGCATCTTCACTTGAAACACTGGTTTGTTCTACA
ACTAACAGTCATGTTCACCAAATATCCTGACTTTTTTCCCTCACAACTAAAGAATTGTGGATCTCTCTCTTCTGTTATAA
GTTGCAATG-TTTCTTTACTAACTATAAGTTGCAGTGTGGTGTCCTCAATTGTAAAGACTAATCCTCACATTGTTTCTTA
GAGGACTAAATTCTCACATTGTTGGTGATGTTACTGCTATTAGATCGGATATCTTTACCTCACGAATTTCAAGCGCTTGG
AGCAAATGATGTTCCAGTTAGGATTCACAAGTGGTGCTTCATCACAGAATATTGCAGATGAGCTGCGCTCAAGCTTCCAG
TAAACATCCTTTATTTGTGCTCCTCTGGTTCCGGTTTTTAATCTGCGTCTGTGCTTACTAATGAATGTTTCTGCCAGGAA
AACAACATCAACTTCTGTACAATCTCAGCAACCTGCAAAGCGATGA----------------------------------
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>chr3A_1_TraesCS3A01G103600
TATTCGATTTTAAGCAATTCAACACAGATGCTAACGAGAACTTATCCTACTCCCTGCTGATTCTATCAAGTTTGTGCGCC
TGAAAGCCTGAAACACAACAGTTGCGCACGGGGAGAGAAGGAGCTACGAA----GAACGCCATGGCCTAACCTGGGAAGC
CGACGTCGCGGAAGTCGCGCACCGGCTTGGGCACGTCGTTGCCCTCGACGGTGATCTCCCGGCGGCGGCGGTAGGCCTCG
ACCTCCTCCGCCGTCATGCCGGCCACCGCGGGAACCTCCACGTAGAAGTTCTTCTCGAACCGCGGCAGCCCGTCCAGCTC
CGCCGCGGCCGCCGCGGCGGCAGCATCCGGCTTTCCCGACGGCGCGAACGCCCTCGTCCCGCCACCGAACGCCCCCTCAC
TGCCAACACGGGCAG-AATAGGTAACCAACCGGACCTAGAACCAGGATTACTAGGGCTGCTGTTAGGCTTAGGGTGTGGA
GCGGAGCGGGTTACCTGCGGCGGTCGCGGTAGGAGCTGGGGTCCGCCGCACGGCCGTCGAAGCGGCTCATGGCGGCGGTC
GCCGGCGGCAGCTAGGGTTTAGCGGCCGGCGGTGGGGGGCTCGGCTCCGGTGAGGGTGCGCCGAGGCGGCGGAGGGCTCG
ATTCGGCA------------GGCCGAGGAATTCTAGAAGAAGCAAGCAAAGCTGATGGCGGCGGCGGCGCGGCGGAGGCG
ATTCGAATTGGAAGTGAAGCGGAGGCGGCGAAGTTCAACAGGCGAGCTCCGCGTGCGGCATTCGGGTAGTGCTCGAGAGA
TTTCACCCTTGTAGGCGTATTTCCCACAAATACGCAACCCGACTAATGAAACGTCTTCCCATGTCTAACGGAAGCGTAAA
ATGGGAATGACTGCACTGCCAGGTGGGCCAGCTCGGGCCGC-----GAACAGAGGAAGAGGGGAAATTATCCACGGCGGG
AGGCTGTTTATTATCCATTTGTATCCTCGACGGCGCGAGAGTTTTGCCTGCGACCGACGACGATGGCCACCGTCGCGGCG
ACCATGGCGG------CGCCGACGCGCCACCGCCAGTTCCGCGTGCGCGCCGCCTGGGACATGAATCCGGGCGCCGCCAC
CGTCGCCGTGCCGAAGCCTTCAAAGGCCAAGCCCAAGCCCGCCCTGGGGCAGTCGCCGGCGACGGCGACCACCCCGGCGC
GCGCGCCCCCTCCCACGCACGCCGACCTCTTCGCGCGCAGCAGCGAGGGCCAAGGTATCTGTCTG----TCCTCCCTCAG
CTCTGCCATCCCGGCCATTTGCTCCACGTTCTAATCCCCTGAAGCTCTGGCAGCATATGCTGTCAGTGAACAACTGGAGG
CAGTTGGTATCAGGCAATTACATACAGAACTG---------------------------------GTCATCGAGA-----
-------------------------ACTTGACGAAAACTAGTTCCATATCGCTGTGCCTGCTCT--------AGTTTTAG
GGCCGTGTAGTTACTACACTATTTAGCCAGAGAAGTTTGTAATTCTGTCAATTGATTGTTGGTTGCTTCGTATTAGCAAA
GAAGAGCACATACATGGGGTTTGAGAAGTGGTGGTTGCCGCCCGCGCCAGAGGTGAAGAAGCCCCGTTCACTCTACAACG
CGGCATCGCTGGCATACTTGGGGGACTGCATATATGAAGTGAGAATTGGTCATTTTGTTCTTTGGTCTTTATGCATTTTA
CAGTTACTGTTATGTAGTTACTATATTACATGTAGCTCAACATAGCTGTCCCTTTTGACCTTCATTTGCTCTGGGTTTAC
TATATGATGTTCCTGACGGTGCTGAGACAATGTGTACTAGTTTT--CAACTCCAAGCTTGTTTGTTGTGAGAGAGATCTG
ACTCTTGCTCTTTGTGATACAGCTCTATGCTCGGAGACACTTCTTCTTTCCTCCACTGAGCATCAATGAATATAATAAGC
GTGTGATGGATGTTGTGAAATGTGAATCACAGGTCTGATATGGCTCTTCTTTATCCTCTGATCAAACAGCTTACATAGAC
TAAATGCTTCAGTATGGTATGTTCGTTGATTGTGATGTAGAATTTATCTTTATCATCTATGTTTATCTATTGTATCATAG
CCTTCATATTAACA-TTTTCCGCACATATCAATAGGTTTTGTCTCCTAATGTTGTTTCAATTACTGCTATTTT-AATGGC
TGTAGTTCAATTTCTGAAGAGCACTCGTTTTGTTTGCCTTTTCTCCCTTCTGTTTGCTGCATATAAGAGAGTGCTTTGAA
GCATCACAATGTCAGGCATATTTTCACATCAATTGTCATTTGTTTCCTTCCTTCAGGATCTGCTGCTGAACAAACTCCTG
GGAGAGGATTTTCTAACTGAAGAAGAAAGGTAAATCTAGTTAATCTACCTTTCTTCTTCCGTCTTCGATGTGTGTCTTGT
ACCTACTTGTTTCATAATATGATACATGCAGCTTTCTTGCATATTCTCGAAGAAAAAAAGTAAAGCTATGTTTCTAGCAT
TTTACTGCCTACTACTCCCTCCGCTCCGAATTACTTGTCTTGGATTTGTCTAGATACGGATGTATCTAGACTCATTTAGT
GCTAGATACCTCCGTATCTAGACAAATCCAAGACAAGTAATTCGGAACGGAGGGAGTAGGAAACACTATGCACTAGCCTC
TATACACATGATTGAACTTCCATGCGGTGTTAGTGCATCAGTATTTAGGACGTATGAATTCATCTTCCTAGAGTTGCCTT
TGTACTGCGCCACGTTTCTTTTCTCTGCATTATATAGAATATGAACAAATGTAGTATTGTTTGATGCTTTCTCATCTGTC
TAGTACCTGTGACCTGTGAGTTACTTAGATAATCATGTTCTGTAGGGACATACTTCGTTGGGGAAGGAACATCGTTAGCA
GCAAAACTCGTACAAGAAAACGGGCAGGAATTGCAGTGTACAATCGAGCATCTTCACTTGAAACACTGGTTTGTTCTACA
ACTAACAGTCATGTTCACCAAATATCCTGACTTTTTTCCCTCACAACTAAAGAATTGTGGATCTCTCTCTTCTGTTATAA
GTTGCAATG-TTTCTTTACTAACTATAAGTTGCAGTGTGGTGTCCTCAATTGTAAAGACTAATCCTCACATTGTTTCTTA
GAGGACTAAATTCTCACATTGTTGGTGATGTTACTGCTATTAGATCGGATATCTTTACCTCACGAATTTCAAGCGCTTGG
AGCAAATGATGTTCCAGTTAGGATTCACAAGTGGTGCTTCATCACAGAATATTGCAGATGAGCTGCGCTCAAGCTTCCAG
TAAACATCCTTTATTTGTGCTCCTCTGGTTCCGGTTTTTAATCTGCGTCTGTGCTTACTAATGAATGTTTCTGCCAGGAA
AACAACATCAACTTCTGTACAATCTCAGCAACCTGCAAAGCGATGAGCAGTTTCAGTATGTAATGAACTGAACCGGAGTT
TCTTTGATGACGCAGCGACTGATACAAGCACGCGTCACTTGCAGCACACGTGTTCCAAAAGTTAAGACTTAAAAGAAAAA
TGAGTGAATGTTGTTTGCGTGTAGGCAAGATCGAGTTAGTTGAGGAACATATATGATCGTGCATACTGGAGGCCGTGCAA
GAGGCTGATGGTTATGATCAGAAGATTGTGGCACATCGAGGTCATGATGATTCTGATCTGAAGATTGTGGCACATTAAGG
TCATGAGCACAATTGAGACCCAAGCTTTGTGTGGATTCCGTGTAAGATATGAGATGTATGGAATGAATTGATGTTGAATG
CTGATATAATCTCAGTTTATTCTAGGGTATATTTCCCATTCTTTTTTTGACCGCAAATAGACTTTATTTCTCAAATAATA
GACATGTCATTTACAAGCAGATGAGAAATAAAATCAGGGATCTAATCATCCCAAGAACTAGAGGATCTAGTAGTAGAAGA
GTTTTTTGCTAATTCATCTGCCACCTAATTGGCCTCTTTATAGCAATGTTTGAAGGATATGGAAGCAAAGTCCATCATAA
GCTGTTTACACTCTGTGATGATAGCTACCTTCGGGCCTAAATAATCATCAACTTGGTCCATAGAGTCCACTGCGAAGAAA
CAATCTGATTCAATTTCTATATTGTTGCATCCAATGTGAGTTGCCAAGCATATCCTGTTTCTAATGGCAGTTAGCTCAGC
TAAGTCAACTTCATTGATGTTTGGAACAAACCAACTTGCTGCAGCAATGAAATCACCCCGGTTGTCCCGAGCCACTGCAC
CACAAGCACCTGATGGGTATATTTCCCATTCTTCTTAAGAGCATCTTCAACAGCCGCCCAACACGCCGCATGCTAAAAAA
CACTTTCCCGTGCGCCCTTCGCCTGGTTTTGTGCGGCCGGCAGCGCTGGCTCCAACAGTCGCGCTAAAATGCAGCGCATG
CGCCGC
>chr3D_1
TATTCGATTTTAAGTAATTCAACACAGATGCTAACGAGCACTTATCCTACTCCCTGCTGATTCAATCAAATTTGTGCGTC
TGAAAGACTGCAACACAACAGTAGCGCACGGGGAGAGAAGGGGCTACGAACGAAGAACGCCATGGCCTAACCTGGGAAGC
CGACGTCGCGGAAGTCGCGCACCGGCTTGGGCACGTCGTTGCCCTCGACGGTGATCTCCCGGCGGCGGCGGTAGGCCTCG
ACCTCCTCCGCCGTCATGCCGGCCACCGCGGGAACCTCCACGTAGAAGTTCTTCTCGAACCGCGGCAGCCCGTCCAGCTC
CGCCGCGGCCGCCGCGGCGGCAGCATCCGGCTTTCCCGACGGCGCGAACGCCCTCGTCCCGCCACCGAACGCCCCCTCAC
TGCCAACACGGGCA-AAATAGGTAACCAGCCGGACCTAGAGCCAGGATTATTAGGGGTACTG------TTAGGGTTTGGA
GCGGAGCGGGTTACCTGCGGCGGTCGCGGTAGGAGCTGGGGTCCGCCGCACGGCCGTCGAAGCGGCTCATGGCGGCGGTC
GCCGGCGGCAGCTAGGGTTTAGCGGCGGGCGGT-GGGGGCCCGGCTCCGGTGAGGGTGCGCCGAGGCGGTGGAGCGTTCG
ATTCGGCA------------GGCCGAGGAATTCTAGAAGAAGCAAGCAAAGCTGATG---GCGGCGGCGCGGCGGAGGCG
ATTCGAATTGGAAGTGAAGCGGAGGCGGCGG-GTTCAACAGGCGAGCTCCGCGTGCGGCATTCGGGTAGAGCTCGAGAGA
TTTTACCCTCGTAGGCGTATTTCCCACAAATACGCAACCCGACTTACGAAACGTCTTCCCATGTCTAACGGAAGCGTAAA
CTGGTAATGAGTGCACTGGCAGGTGGGCCCGCACGGGCCACAAACAGAACAGAGGGAAA-GGGGAAATATCCGCGGCGGG
AGGCTGT---TTATCCATTTGTATCCTCGACGGCGCGAGAGTTTTGCCTGCGACCGACGACGATGGCCACCGTCGCGGCG
ACCATGGCGACGCCGACGCCGACGCGCCACCGCCAGTTCCGCGTGCGCGCCGCCTGGGACATGAACCCGGGCGCCGCCAC
CGTCGCCGTGCCCAAGCCGTCAAAGGCCAAGCCCAAGCCCGCCCTGGGGCAGTCGCCGGCGACGGCGACCACCCCGGCAC
GCGCGCCCCCTCCCACGCACGCCGACCTCTTCGCGCGCAGCAGCGAGGACCAAGGTATCTATCTATCTATCCTCACTCAG
CTCTGCCATCCCGGCCATTGGCTCCAC-----------------------------------------AACAACTGGAGG
CAGTTGGTAGAAGGCAATTACATATAGATTTTGACTTTAAAAAGCAGGTGCAATAGAATGATTGTGTCATCAAGAATGAG
AACATAATTCGATATTTTCTACTTCACTTAATGACAACTACTACCATATGGCTGTGGCCTGCTCTAGTGTTCAGTG----
------------------------AGCAAGAGAAGTTTGTAATTCTGTCAATTGATTGTTGGTTTGTTCGTATTAGCAAA
GAAGAGCACGTACATGGGGTTTGAGAAGTGGTGGTTGCCGCCCGCGCCGGAGGTGAAGAAGCCCCGTTCACTCTACAACG
CGGCATCGCTGGCATACTTGGGGGACTGCATATATGAAGTGAGAATCCGTCATTTTATTCTTTGGTCTTTATGCACTTTA
CAGTTACTGTTATGTAGT---TATATTACATATAGCTCAATATATCTGTCACTTTTGACCTTCATTTGCTCTGGATTTAC
TATATGATGTTCCTGACGATGGTGAGACAATGTGTACTAGTTTTTTCAACTTCAAGCTTGTTTGTTGTGAGAT-GATCTG
ATTCTTGCTCTTTGTAATACAGCTCTATGCTCGGAGACACTTCTTCTTTCCTCCACTGAGCATCAATGAATACAATAAGC
GTGTGATGGATGTTGTGAAATGTGAATCACAGGTCTGATATGGCTCTTCTTTATCCTCTGATCAAACAGCTTACATAGAC
TAAATGCTTCAGTATGGTATGTTCGTTGATTGTGATGTACAATTTATCTTTATCATCTATGTTTATCCATTGGATCATAG
CCTTCATATTAGCA-TTTTC-GCATATATCAATAGGTTTTGTCTCCTAATGTTGTTTCAATTACTGCTATTTT-AATGGT
TGTAGTTCAATTTCTGAAGAGCACTTGTTTTGTTTGCCTTTTCTCCAATCTGTTTGCTGCATATAAGAGAGTGCTTTGAA
GCATCACGATGTCAGGCATATTTTCACATCAATTGGCATTTGT----TTCCTTCAGGATCTGCTGCTGAACAAACTCCTG
GGAGAGGATTTTCTAACTGAAGAAGAAAGGTAAATTATGTTAATCTGCCTTTCTTCTTCCGCCGCTGATATGTGTCTTGT
TCCTACTTGTTTCTTAATATGATACATGAAGCTTTCTTGCATGTTCTCGAAGAAAAAAGGTAAACCTATGTTTCTAGCAT
TTTACTGCCTAC--------------------------------------------------------------------
--------------------------------------------------------TAGGAAACACTATGCACTAGCCTC
TATACACATGATTGAGCTTCCTTGCGGTGTTAGTGCATCAGTATTCAAGACGTATGAATTCATCTTCCTAGAGTTGCCTT
TGTACTGCACCACATTTGTTTTCTCTGCATTAGATGGAATATGAACAAATGTAGTATTGTTTGATGCTTTCTCATCTGTC
TAGTACCTGTGACCTGTGAGTTACTTAGATAATCATGTTCTGTAGGGACATACTTCGTTGGGGAAGGAACATTGTTAGCA
GCAAAACTCGTACAAGAAAACGGGCAGGAATTGCAGTGTACAATCGAGCATCTTCACTTGAAACACTGGTTTGTTCTACA
ACTAACAATTATGTGCACCAAATATCCTGACTTTTTTCCCTCACAACTAAATTTTTTTGGATCTCTCCCTTCCATTATAA
GTTGCAGTGCTTT-TTTACTAACTATAAGTTGCAATGTGTTGTCCTCAATTGTAAAGACTAATCCTCACATTGTTTCTTT
GAATACTAAATTCTCACATTGTTGGTGATGTTACTGCTATTAGATCGGATATCTTTACCTCACGAATTTCAAGCGCTTGG
AGCAAATGATGTTCCAGTTAGGATTCACAAGTGGTGCTTCGTCACAAAATATTGCAGATGAGCTGCGCTCAAGCTTCCAG
TAAACATCCTTTATTTATGCTCCTCTGGTTCCGGTTTTTAATCTAAGGCTGTGGTTACTAATGGATGTTTCTGTCAGGAA
AACAACCTCAACTTCTGTACAATCTCAGCAACCTGCAAAGCGATGAGCAGTTTCAGTATGTAATGAACTGAACCGGAGTT
TCTTTGATGATGCAGCGACTGATACAAGCACGCGCCACTTGCGGCACATGTGTTCCAAAAGTTAA-ACTTAAAAGAAAAA
TGAGTGAATGTTGTTTGTGTGTAGGCAAGATCGAGTTAGTTGAGGAACATATATGATCGTGCATACTAGTGGCCGTGCAA
GAGGCTGATGATTCTGATCGGAAGATTGTGGCACATCGAGGTCATGATGATTCTGATCTGAAGATTGTGGCACATTAAGG
TCATGAGCACAATTGAGACCC-AGCTTTGTGTGGATTCCGTGTAAGATGCGAAATCTATGGAATGAATTGATGTTGA-TG
CTGATATAATCTCAGTTTATTCTAGGGTATATTTCCCATTCTTGTT----------------------------------
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>chr3B_1
TATTCGATTTTAAGTAATTCAACAGAGATGCTAACGAGAACCTATCCTACTCCCTGCTGATTCTATCAAATTTGTGCGTC
TGAAAGCCTGAAACACAACAGCAGCGCACGGGGAGAGAAGGAGCTACGAA----GAACACCATGGCCTAACCTGGGAAAC
CGACGTCGCGGAAGTCGCGCACCGGCTTGGGCACGTCGTTGCCCTCGACGGTGATCTCCCGGCGGCGGCGGTAGGCCTCA
ACCTCCTCCGCCGTCATGCCGGCCACCGCGGGAACCTCCACGTAGAAGTTCTTCTCGAACCGCGGCAGCCCGTCCAGCTC
GGCCGCGGCCGCCGCGGCGGCAGCATCCGGTTTGCCCGACGGCGCGAACGCCCTCGTCCCGCCACCGAACGCGCCCTCAC
TGCCAACACGGGCAGAAATAAGTAACCAACCGGACCTAGAACCAGGATTACTAGGGCTACCGTTAGGATTAGGGTTTGGA
GCGGAGCGGGTTACCTGCGGCGGTCGCGGTAGGAGCTGGGGTCTGCCGCACGGCCGTCGAAGCGGCTCATGGCGGCGGTC
GCCGGCGGCAGCTAGGGTTTAGCG--CGGCGGTGGGGGGCTCGGCTCCGGTGAGGGTGCGCCGAGGTGGTGGGGGGTTCG
ATTCGGCGAGCGAGGTTTCTGGCCGAGGAATTCTACAAGAAGCAAGCAAAGCTAATG---GCGGCGGCGCGGCGGAGGCG
ATTCGAATTGGAAGTGAAGCAGAGGCGGCG-AGTTCAACAGGCGAGCTCCGCGTGCGGCATTCGGGTAGAGTGCTCGAGC
TTCTGCCCTGGTAGGCGTATTTCTCAGGAATACACAACCCGAGTTATGAAACGTCTTTCCATGTCTAACGAATGCGTAAA
CTGGCAATGACCGCACTGCCAGGTGGGCCCGCTCGGGCCGC-----GAACAGAGGAAAA-GGGGAAATATCCACGGCGGG
AGGCTGT---TTATCCATTTGTATCCTCGACGGCGCGAGAGTTATTGCCTG---CGGCGACGATGGCCACCGTGGCGGCG
ACCATGGCGACGCCGAC------GCGCCACCGCCAGTTCCGCGTGCGCGCCGCCTGGGACATGAACCCGGGCGCCGCCAC
CGTCGCCGTGCCCAAGCCGTCAAAGGACAAACCCAAGCCAGCCCTGGGGCAGTCGCCGGCGGCGGCGACCACCCCCGCAC
GCGCACCCCCTCCCACACACGCCGACCTCTTCGCGCGCAGCAGCGAGGACCAAGGTATCTATCTATCTATCCTCACTCAG
CTCTGCCATCCCGGCCATTTCCTCCACGTTCTACCCCCCTGAAGCTGTGGCAGC--ATGCTGTCAGTGAACAACTGAAAA
---TTGGTCGAAGGCAATTACATATAGATTTTGACTTTAAAA-GCAAGTGCAATAGAATGGTTGTGTCATCGAGAATGAG
AACATAATTCGATATTTTCTACTTCACTTAATGACAA-------CATATGGCTGTGGCCTGCTCTAGTGTTCAGTGTTAG
GACCGTGTAGTTACTACACTATTTAGGCAGAGAAGTTTTTTATTCTGTCAATTGATTGTTGGTTGGTTTGTATTAGCAAA
GAAGAGCACGTACATGGGGTTTGAGAAGTGGTGGTTGCCGCCTGCGCCAGAGGTGAAGAAACCCCGTTCACTCTACAACG
CGGCATCGCTGGCATACTTGGGGGACTGCATATATGAAGTGAGAACTGGTCATTTTATTCTTTGGTCTTTATGCACTTTA
CAGTTGCTGTTATGTAGT---TATATTACATGTAGATCAGCCTAGCTGTCGCTTTTGACCTTCATTTGCTCTGGATTTAC
TATATGATATTCCTGACGACGCTGAGACAATGTGTACTAGTTTTTTCAACTTCAAGCTTGTTTGTTGTGAGAG-GGTCTG
ATTCTTGCTCTTTGTGATACAGCTCTATGCTCGGAGACACTTCTTCTTTCCTCCACTGAGCATCAATGAATACAATAAGC
GTGTGATGGATGTTGTGAAATGTGAATCACAGGTCTGATATTGCTCTTCTTTATCCTCTGATCAAACAGCTCACATAGAC
TAAATGCTTCAGCATGGTATGTTCGTTGATTGTGATGTAGAATTTATCT-TATCATCTATGTTTATCCATTGTATCATAG
CCTTCATATTGACATTTTTC-GCATATATCAATAGGTTTTGTCTCCTAATGTCGTTTCAATTACTGCTATTTTTAATGGT
TGTAGTTCAATTTCTGAAGAGCGCTCGTTTTGCTTGCCTGTTCTCCATTCTGTTTGCTGCATATAAGAGAGTGCTTTGAA
GCATCACAATGCCAGGCATATTTTCACATCG-TTGTCATTTGTTTCCTTCCTTCAGGATCTGCTGCTGAACAAACTCCTG
GGAGAGGATTTTCTAACTGAAGAAGAAAGGTAAATTAAGTTAATCTGCCTTTCTTCTTCCACCACTGAT-TGGGTCTTGT
ACCTACCTTTTTCTTAATATGATACATGCAGCTTTCTTGCATGTTCTCGGAAAAAAAGGGTAAACCTATGTTTCTAGCGT
TTTACTGCCTAC--------------------------------------------------------------------
--------------------------------------------------------TAGGAAACACTATGCACTAGCCTC
TATACACATGATTGAGCTTCCATGCGGTGTTAGTGCATCAGTATTCAGGACGTATGAGTTCATCTTCCTAGAGTTGCCTT
TGTACTGCACCACATTTGTTTTCTCTGCATTATATGGAATATGAACAAATGTAGTATTGCTTGATGCTTTCTCATCTGTC
TAGTACCTGTGACCTGTGAGTTACTTAGATAATCATGTTCTGTAGGGACATACTTCGTTGGGGAAGGAACATCGTTAGCA
GCAAAACTCGTACAAGAAAACGGGCAGGAATCGCAGTGTACAATCGAGCATCTTCACTTGAAACACTGGTTTGTTCTACA
GCTATCAATTATGTGCACCAAATATCCTGACTTTTTTCCCTCACATTTTAAAAATTGTGGATCTCTGTCTTCTATTGTAA
GTTGCAATG-TTT-TTTACTAACTATAAGTTGCAATGTGTTGTCCTCAATTGTAAAGACTAATCCTCACATAGTTTCTTA
GAAGACTAAATTCTCACATTGTTGGTGATGTTACTGCTATTAGATCGGATATCTTTACCTCACGAATTTCAAGCGCTTGG
AGCAAATGATGTTCCAGTTAGGATTCACAAGTGGTGCTTCGTCACAGAATATTGCAGATGAGCTGCTCTCAAGCTTCCAG
TAAACATCCTTTATTTATGCTCCTCTGATTCCGGATTTTAATCTACGGCTGTTCTTACTAATGGATGTTTCTGTCAGGAA
AACAACCTCAACTTCTGTACAATCTCAGCAACCTGCAAAGCGATGAGCAGTTTCAGTATGTAATGAACTGAACCGGAGTT
TCTTTGATGACAGAGCGACTGATACAAGCATGCGCAACTTGCGGCACACGTGTTCCAAAAGTTAA-ACTTAAAAGGAAAA
TGAGTGAATGTTGTTTGTGTGTAGGCAAGATCGAGTTAGTTGAGGAACATATATGATCGTGCATACTAGAGGCCAT-CAA
GAGGCTGATGATTCTGATCGGAAGATTGTGGCACATCGAGGTCATGATGATTCTGATCCGAAGATTGTGGCACATTAAGG
TCATGAGCACAATTGAGACCCAAGCTTTATGTGGATTCCGTGTAAGATGTGTGATCTATGGAATGAATTGATGTTGAATG
CTGATATAATCTCAGTTTATTCTAGGGTATATTTCCCATTTTTATT----------------------------------
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>SNPs
--------------S------------------------------------------------------S--------S-
----------------------S---------------------------------------------------------
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----------------------------------------------------------S--------S-------S----
--------------------------------------------------------------------------------
---------------------------------------------------------------------S------S---
---------------------------------------------------------SSS--------------------
------------------------------S--------------------------------------S----------
---S-----S----------------------------------S-----------------------------------
S---S------------------------S---------------------------S-S---S--S-------------
-------SSS----------------------------------------------------------------------
---------S-------------------------------------------------------S--------------
------------S-----S-----------------------------------------------------------S-
------------------------------------------------S-----------S---S---------S-----
---------------------------------SS-----------S-------SS------------------------
---------SS-------------S---SS-S------------------------------------------------
-----------------------------S-S--S-----S-S------S------S-SSSSSS-----------S----
-S---------------------------------------------------------------S--------------
---------S----------------------------------------------------------------------
--------------------------------------------------------S------------------S----
------------------SSS-----------------------------S-----------------------S-----
------------------S--------------------------------S---------------------S------
-S----------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------S---S------------------------------------------------------S
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-----------------------------------SS---------S--------------S-SSS---S----------
-------------S----------------------------S---------------S-----S---------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
---------------S-----------------------------S----------------------------------
--------S----S---S-----------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-S----S------------------------------------S---------------------S------
-------------S--------------------S----S----------------------------------------
--S-----------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------S---------------------------S--S---------------S---------S------
------S-------------------------------------------------------------------------
----------------------------------S-------S----------------------S--------------
-----------------S-------------------------------------------------S------------
----------S--S-----S------------------------------------------------------------
------------------------------------------------S------S------------------------
-------------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_699
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---------------------------------------AAGCAAGCAAAGCTGATGGC---------------------
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>reverse_2575
--------------------------------------------------------------------------------
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--------------CTCCCTCCGCTCCGAATTAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1504
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CATATCGCTGTGCCTGCTCT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2576
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCCCTCCGCTCCGAATTACT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>forward_1516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CGCTGTGCCTGCTCTAGTT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2577
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCCTCCGCTCCGAATTACTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>forward_1522
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TGTGCCTGCTCTAGTTTTAG
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_2681
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTCGGAACGGAGGGAGTAGG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>forward_2594
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CTCCCTCCGCTCCGAATTAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_4283
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------AGCAATGAAATCACCCCGGT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
