>input_sequence_33628
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---------------------------------------------ATGCGCAGCTCCGCCGCAGCCAATCCCGCGCCCCA
CCTCCACTTGGCAGAGCTCAACAGCTTTCCCCCTCCTCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGG------------
CCGAAACGGCTCTGAGGCGACGCGCACACTGTCATTCA---TCCCGCAGATCCACGCAGAACCAACTCCATTCTTTAGAG
ATCCCGGAGCGGATTTCGCACGGGAACCCACCGCCCACAAG---CCGCCGCGTGATCCTGCTCCTGCTCCTCGTCGTCGT
CCTAGGGGCCATGGGGAACAGCATATACAAGTTCCTGTGCGGGGTCTGCTCGGACCTCTCCGACGCCGCCTTCCAGCCGC
ACGGCGGGGACGCCTCCGTCGCCGCGCTCGGCCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTC
AGCCGCCACGTCGTCTCCTCCGCCGCCGCGCAGGCCAACTGGTACGTACTA-------------TAATTCCGCTT-CCCC
TTTGATTGATTTCGTGTTC-GA--------TTCCTTGCCGAGCTCCCTCCGGCAAATTCGTGCTCGGAGTACCAGTAG--
----TTTAACTCGGAGCTGACGACGAGCCTGTCAAAGACCGATTCAGAGACGACGGCCTGGCTAGCTCACTGTCGAG---
-CGT---GGATGCGAAGGCTAGCTTCGAGCGAGGTGTCCAATTCCGAAAGCGACCTGATCTGGAAGAGAAATTGAGTAAA
AGAAATTAGGT---AGCACTTGTTAAAAGGACAAAAGAAACTAGAATTTT------------------GTTAAGG----A
TTTTCATTTTTGTTTTACTTTCTTTTTACGGGTATAAACCGGTAAAGGGAACGAGATAACTAATTAACTACCATACTCAC
TGGTAAACCATACAATTAAGAACTCGGTGCTATTACTGAGATGTTTCCTAGCAATTGCTAAGGCTTGCAGCAGGAGCTAC
TGAGATGTTTCCTGGAATTGATTGTGAACATTCGTAGAAGAAGCTTGTTCATAGTATCAGT--GTAAAAAAATGCTGCCA
CG----ATGATCATTTCTTACAAAGTTGAAACC----------GCTGA------------TGTGAAGGTACAAGAAGCTG
CAAGTGGCATGGAAGAAGGCGAGGCCAGCCCCGACCACGCCGGAGGAGGCCGGCCGCCTCGTGGTGCTGACGCTGAAGAA
CCACCAGAAGGCGGACGTCGACGGCCTGCTCGCCTTCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCGCCGC
CCGCCGCCGGTCACCACGCCCCTCCGGCCCAGCACAGCGCCCCCGCGCACAAGCCGCAGGGCGTCAAGTTCGAGCTGCAC
ACGCTCCCGGTGGACGCCAAGGCGGTGGCGGACGGCGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGA
GATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGCGCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCA
TCGCCGCCGCGGGATACAGAATGGTTCCCAACGCCAAGGGCGTTGAGGTGCTCGCCAAGAAGTACAGGATCAGGCTAAGG
TAACAACTATGTACACTTGTACAGTACTATAATTGATTCAGTGATCAAGATCGGCTAGCTTGTGTGAACAAGTT------
-ATGAAATGAGATGAAATGGGATGTGATGCAGTGGGATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAC
GGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCCTGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCG
GGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTGAGAACCCATAC--------------------------CTTCAGAG
CAGTTCGCCTGTTGGAAACAACTTGAGAATAAGAACTGCAGCATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATT
CT-----TGCA---GTTGAAAACAGCAGTGTTACGCATGGTAGA---------------------AGCGAAGTTGAAC-A
AACTGTTGCTTCTGCATTCCGCAAGGAACGCGTTCAGAAACAGCT-----GCCTTTTCTGAAAGTCAACCGCTCTCCAAG
AA-CTTCAGAAGATAACAAATCCCCTCTTGCTTTGTCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACAC
CGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAAAATCATCACCAGTCCACATACAGATACACGCATTACCCACTGATC
ACCTGACAGTAAAAA-GAACCATGGAGATATTCTGAAGTG-------ATATGGAATCAAACCATGAAGTTGCTGACAGAA
ACTAATCCCCTCTTTGACCCACCTGCAGTGGCAGAGCCAGGCGCAGGCCGCGCGCAAGGGCCTGTGGGCGGCGTCCAAGC
CGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGCAACGGCAACGCGTGA------------------------------
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>chr3A_1_TraesCS3A01G097800
CCTAA---------------------------------------------------------------------------
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------------------------------------------------------------------TGCAAGCAATCTTT
TAGCGTATGGTGAAAATACTTTTAATATATGATGAGTATTTGTAATACATACTAAACATTTTCTTATTGTGCATTGAACA
TTTTTAATATACAACGATTTTTTTAATAATAGGGTGACCATT----------GATCGAAGATTTTTT-AAATATATGGTG
AACCTTTTTTAATATACAATTTTTT---AACACACACCGAACAATTTTGTAAAATATATTATTATTTTTAATAGGTTTCT
GAAGGCCTGTTTGGCATCACTCCGCTCCATACTCCCGCTCCGGGAGCTGGCGGAGTTGAAGTTAAAAATTATGGAGCGGG
GGAACAGGTGCTCCGCAGATCCTCGAATTTTAGGGAGCAGCTGGATTGCCGAACAGCTCTTAAATGTCTAGCGTTGACAT
CCTCCTCCGTCACTAGGTCCACATGGAAACCAGCCCAAAATATCTTAGAGAGACAGGGAACCAATAACCACC------AA
GTGCACATGGTAAACAGCCCAAAAAGTGGCGACATGCCCCGTCCCTC-GGTCCCACCCAACAGCCCAGCGGAGTGAAGGA
AGTGAGTAAAGGCAGATCGGATGTGCAGGCAGGGAATACTGCACGAGAACTTGCACCCAGTGCACGAGCGACGCTTCCCT
GCCTCTCAATCAACTACTCCTACGTTTAAT------AAACAAAAGAAAAGAACGTATGCGCGCAGCAAGTGTTGAAAAT-
----------C---------------ATCCCCAATAATTCGATCGTTCTCTCC-ATCCATCCGGT-GCAGCCAGATGAGG
TGAGGTGGCGCAAGGGCACCCACCCGAATTGGTATCGCCAACATCAGGCCTCCACCTGCGCATGCCACGTAGCGGCGGAT
ACGCTGCCATTATCTGCAAATGGCAAAACTAATCTCAATCACCGAAAGCA------------------AAATCAGTCGGC
AACAGCGACC--------------CGCCGTGCCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTC------CAAT
TTTAGTATAA-----------ACCCCCTGCGCAGGAGCAAATCCTATGCGCAGCTCCGCCGCAGCCAATCCCGCGCCCCA
CCTCCACTTGGCAGAGCTCAACAGCTTTCCCCCTCCTCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGG------------
CCGAAACGGCTCTGAGGCGACGCGCACACTGTCATTCA---TCCCGCAGATCCACGCAGAACCAACTCCATTCTTTAGAG
ATCCCGGAGCGGATTTCGCACGGGAACCCACCGCCCACAAG---CCGCCGCGTGATCCTGCTCCTGCTCCTCGTCGTCGT
CCTAGGGGCCATGGGGAACAGCATATACAAGTTCCTGTGCGGGGTCTGCTCGGACCTCTCCGACGCCGCCTTCCAGCCGC
ACGGCGGGGACGCCTCCGTCGCCGCGCTCGGCCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTC
AGCCGCCACGTCGTCTCCTCCGCCGCCGCGCAGGCCAACTGGTACGTACTA-------------TAATTCCGCTT-CCCC
TTTGATTGATTTCGTGTTC-GA--------TTCCTTGCCGAGCTCCCTCCGGCAAATTCGTGCTCGGAGTACCAGTAG--
----TTTAACTCGGAGCTGACGACGAGCCTGTCAAAGACCGATTCAGAGACGACGGCCTGGCTAGCTCACTGTCGAG---
-CGT---GGATGCGAAGGCTAGCTTCGAGCGAGGTGTCCAATTCCGAAAGCGACCTGATCTGGAAGAGAAATTGAGTAAA
AGAAATTAGGT---AGCACTTGTTAAAAGGACAAAAGAAACTAGAATTTT------------------GTTAAGG----A
TTTTCATTTTTGTTTTACTTTCTTTTTACGGGTATAAACCGGTAAAGGGAACGAGATAACTAATTAACTACCATACTCAC
TGGTAAACCATACAATTAAGAACTCGGTGCTATTACTGAGATGTTTCCTAGCAATTGCTAAGGCTTGCAGCAGGAGCTAC
TGAGATGTTTCCTGGAATTGATTGTGAACATTCGTAGAAGAAGCTTGTTCATAGTATCAGT--GTAAAAAAATGCTGCCA
CG----ATGATCATTTCTTACAAAGTTGAAACC----------GCTGA------------TGTGAAGGTACAAGAAGCTG
CAAGTGGCATGGAAGAAGGCGAGGCCAGCCCCGACCACGCCGGAGGAGGCCGGCCGCCTCGTGGTGCTGACGCTGAAGAA
CCACCAGAAGGCGGACGTCGACGGCCTGCTCGCCTTCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCGCCGC
CCGCCGCCGGTCACCACGCCCCTCCGGCCCAGCACAGCGCCCCCGCGCACAAGCCGCAGGGCGTCAAGTTCGAGCTGCAC
ACGCTCCCGGTGGACGCCAAGGCGGTGGCGGACGGCGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGA
GATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGCGCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCA
TCGCCGCCGCGGGATACAGAATGGTTCCCAACGCCAAGGGCGTTGAGGTGCTCGCCAAGAAGTACAGGATCAGGCTAAGG
TAACAACTATGTACACTTGTACAGTACTATAATTGATTCAGTGATCAAGATCGGCTAGCTTGTGTGAACAAGTT------
-ATGAAATGAGATGAAATGGGATGTGATGCAGTGGGATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAC
GGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCCTGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCG
GGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTGAGAACCCATAC--------------------------CTTCAGAG
CAGTTCGCCTGTTGGAAACAACTTGAGAATAAGAACTGCAGCATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATT
CT-----TGCA---GTTGAAAACAGCAGTGTTACGCATGGTAGA---------------------AGCGAAGTTGAAC-A
AACTGTTGCTTCTGCATTCCGCAAGGAACGCGTTCAGAAACAGCT-----GCCTTTTCTGAAAGTCAACCGCTCTCCAAG
AA-CTTCAGAAGATAACAAATCCCCTCTTGCTTTGTCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACAC
CGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAAAATCATCACCAGTCCACATACAGATACACGCATTACCCACTGATC
ACCTGACAGTAAAAA-GAACCATGGAGATATTCTGAAGTG-------ATATGGAATCAAACCATGAAGTTGCTGACAGAA
ACTAATCCCCTCTTTGACCCACCTGCAGTGGCAGAGCCAGGCGCAGGCCGCGCGCAAGGGCCTGTGGGCGGCGTCCAAGC
CGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGCAACGGCAACGCGTGATCCATTTCAT------------------CT
C---GACGCATATGTTGTAACTGTTGTGTGTATGTGCTGTGACCATGGACAGCTGATTGATTGATTTCGTGGCCTGCTGC
ACTGCAGATCCGTAGCCCAGAGCAGCGCTCGCGCCACTGTACTTTTTACAGGCTAGGTGTAGTGAAAACTGAAAAGTCTA
GCTGAGCTAGCG-----CGGGGTCGTGAAGCAGAGGAGGCCGGGGCACATTGAGATTGGTTGGTGTCATTGTGTTGTTGT
TGTACCTGGTGATTAATTTGTGTGATTGTGGTGTACATCTCTTACTTGGATTGGACTGTTGGTGTTGTTTTTGAACAGAA
AAAGGCTGATTCATAGGCTGCTGTTGTCAGTTCAGTCGAACGCAGA---------ATGCTAATAAACTTCTGTTTTTGCC
ACTAGTATTATACTCCCTCCGTTCCTAAATATAAGTCCTTTTAGAGATTTGAATATGGACTACATATGGATAAATATAGA
CACATTTTACAGGATAGATTCACTCATTTTGCTCTGTATCTAGCCCATATTAGAATCTCTAAAAAGACTTAGGCCTCCTT
TGGTTTTGGTTTGAAGGAATTTTGTAGGAATTTCATAGGATATGATTTCTATAGAAAAAATTTCCTTTAGAACTTTTTAC
TTTGTAGGAATGGAATCTTATTGCCATGGAGGAATTCTTCCTATCATTCACATTTCGTAGGAAAATAAACATTAACCTAG
ACTTAATGGAAAAAAATCCTATGATATGAATCAAATGACATCTCCTTTCCCATTCCTACTCATAAGATTTGAGATACATG
CCATCTCATTTTCTATGACTTTTCTATTCCCATAATTTTCCTACCCTATAAACCAAAGAAGGCCTTACATTTAGGGCATG
TTTGGTTTCAAATAAGTCACCAACTTATAAGTCAAAAGGTAAAAAAAGTGACTTATTTTGCCAAACAGACCCGACTTATA
AGTCACCCCAACTTATAAGTCATAAGTTGCTCCACCCCAACTTAA
>chr3D_1
ACTCCGCTCCACACTCTCGCTCCCGGAGCCGGTGGAGTTGAAGTTAAAAATTACGGAGCGGGGGAACAGGTGCTCCGCAG
ATCCTCGAATTTCAGGGGCAGCTGGATTGCCGAACAGCTCTTAAATATCTAGCGTTGACATCCTCCTCCGATCACTAACT
AGGTGCACATGGAAACCAGCCCAAAATATCTTAGGCTGGCCATAGTGGGGGTAACATAACCGGTAACATGCACTTGGGAC
TAGCAAACATGCTTATGTGGCACACAATTAAAAAAGAGAGAGAAGGTTAGAGTAACATAGGTAGATATCGTATCATGTTA
AATGCTATGCTACTTTGTGTCATGCATGGCAATAAATATGATGATCTATAATACTACTTTATGATACTATGCACTATGAA
GGTACTATCATACACTAGTATCATATGCATGATACTAGTATATGTTACTCCCCACTGTGACCAGCCTAAGAGAGACAAGG
AGGCAATAAAACTGGACACACGAACGAAGACTGGATCCACGGAGATCTATCGAAGGTCAATACCGACTGAATCCCATGAG
ATCCGTTGTAGAGACATCTCGACACGCCCTCTGACGATGCTAGACACACCGTCAAGACGGGAGCAAGGTGGGAGGACTTT
ATTCCATCTTCAGGGAGCCGCCGCCACTTCTTCTTCAACACGACACAAACTCTAATCGACCTAAAACGAAGCAGGAACCC
TCCCGCCGGCAAGGTCGAGGTCCACAGCACCTCCATGTCCCTAAAGCCACTGGAGAAGAGGCAGACTGGCAGTGGCGCCG
ACAGGGGGTTGAGGAACCCTATAGTCACGTGTGGACTCAAGGAGAAAAAGGGGTACGCATGCCAGCCAAAGGCATCAATC
GTATGTGTATGTGTGCATCTATTATCAGGCAAGTGTTAATTGTCTCACCAATTATCACTTGTAAAATTTTCATATCATAT
CTCTTGGACATCAACCTGGGAATAGGGCAGGTTCGTGTGGTTATTCTAGGGAGAAAAGTAAGCTTTTGGTCCCTCAAGTT
AACAAGAAGTCAACATCTGGTCACTCATCTTTTTTGTCGACATTCAGTCCCTCATTTTTAAAAACATAGTAGTACTATAA
ATCAAGAAGGCGAGAGCACCAGTGGCAACGACTGGACAGAGAGGGGGGAGGGGCGGCAATGAGTTGCGTCCGGGAAGAAG
GCCAATTTTCCGGAGGACCGATGCAGGCGTCTTCATGGCGACGCTTCAAGGAGGTTATAGGTAGCCTCACGCTCTTTTTT
TTGCATTCATCCCGCCTTTTCTCCTTCAATTCCACGAGTCCCGCTCGAAGCTTTTAAACCACTTAGATTTGGGGAAATTT
TGGGGAATGTGGGGGCTGGCTCTGGCAAACCCAGTTTGCCAGACGAGATTCGGGGATTTCTGTGGTTTTTCTCCCCTCCT
ATAGGATAATCCTCTATAAACCTCCATGAATCTCTTCTACCAAACAAGGCCAAAAGAATCCGTTGTTTTATGGGTGAATT
AAACATACTTGGTGCAGACAAATCTTGTAGGCTTTCTTTATCAGGATTTGAATGGACATGCCATTGGAATACATTTTTTG
GTTACTTCCTTGTAATAATAGAAGATAGACGTGCCACTAAAATTTCGTGTTTTTTCTTTCTATTTTGACGTTTTTATAGC
CCTCGTATGTATAGTAGAACCCTTCTTGGAATTACCAACACCAGTGTGGCTATGTTTTTTTTGAGGGGTTGCCACCATTT
GATTAATTAAGAAACAATAACATCCGGTACAACTAAAACATCAGGTATTGTGGATAACCAAAGATAACGACCAGCAGCTA
AAGAAACTGAGGCCCTAGCAAGATCGTGAGCTTCAAAGTTGGCTTCTCTTGCTTCATGTATCACTTCTGGTTCTTCAAAC
TTCAGCATTCTTCTCTTGATGTCCCCTATAATTGCCGACGAAATTCCCATGAACGTGTACGACCTGGCTCTCCAACAGGT
CGAATCCTATTCACTGCCCACAAGCGGCAAATAGGCACCATGATGGCCACTGGCAAGCCGAGTTAGGCTGGCCCAATTTG
GGGCCTTTTATCGCGTATTCCTGTTCGATGCAACTTTTCTGTTGTGTTTTCCTTTTCTTTTCCTAATGCAAACAATTTTT
TAGCGTATGGTGAAAATACTTTTAATATATGATGAGTATTTTTAATACATACTAAACATTTTCTTATTATGCATTGAACA
TTTTTAATATACAACGATTTTTT-AATAATATGATGACCATTTTTCAATATAGATCGAAGATTTTTAAAAATATATGGTG
AACCTTTTTTAATGTACAATTTTTTTAAAACACACGCTGAACAATTTTTTAAAATATATTACTTTT---AATAGGTTTCT
AAAGGCCTGCTCGGCATCACTCCGCTCCACACTCTCGCTCCCGGAGCCGGCGGCGTTGAAGTAAAACATTACGGAGCGGG
GGAACAGGTGCTCCGCAGATCCTCGAATTTCATGGAGCAAATGGTTTGCCGAACAGCTCTTAAATATCTAGCGTTGACAT
ACTCCTCCGTCACTAGGTGCACATGGAAACCAGCCCAAAATATCTTAGCGAAACGGCGAGCCAATG---ACC------AG
GTGCACATGGCAAACAGCCCAAAAAGTGGCGACACGCTCCGTACCTCGGGTCCCTCCCAGCAGCCCAACGCAGTGAAGAA
AGTGAGTAAAGGCAGATCGGATGTGCAGGCAGGGAATACTGCACGAGAACTTGCACTCACTGCACGAGCGACGCTTCCCT
GCCTCTCATCTCAATCAACT--------AT------AAACAGAAGAAAAGAAGGTA--CGCGCACCAAGTGTTGAAAACC
ATCCCCAATAACATTTTTTAAACAAGATCCCCAATAATTCGATCGTTCTCTCCGATCCATCCGGC-GCAGCTAGATGAGG
TGAGGTGGCGCGAGAGCACCCACCCGAATTGGCATCGGAAACAGCATATCTCCACCTAGGCGTGCCACGTAGCAGCGGAG
ACGCTGCCATTATCGGCAAATGGCAAAACTAATCTCGATCACCGAAAGCACCAACCCTACCCCGGAAGAAATCAGTCGGC
AACAGCGACCGCT-GACGACGCCTCGCCGTGCCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTCCAATCTCAAT
TTTAGTATAAACCCAGCGCACACCCCCTGCGCAGGAGCAAATCCTATGCGCAGTCCGGCCGCAGCCAATCCCGCGCCCCA
CCTCCACTTGGCAGAGCTCAACAGCTTTCCCCCTCCCCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGG------------
CCGAAACGGCTCTGAGGCGACGCGCACACTGTCATTCTTCCTCCCGCAGATCCACGCAGAACCAACTCCATTCTTTACAG
ATCCCGGGGCGGATTTCGCACGGAAACCCACCGCCGCCGCCCACCCGCCGCGTGATCCTCCTCCTGCTCCTCGTCGTCGT
CCTAGGGGCCATGGGGAACAGTATCTACAAGTTCCTGTGCGGCGTCTGCTCGGACCTCTCCGACGCCGCCTTCCAGCCGC
ACGGCGCGCACGCCTCCGTCGCCGCGCTCGGCCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTC
AGCCGCCACGTCGTCTCCTCCCCCGCCGCGCAGGCCAACTGGTACGTACGTATGCGGCGGAGTGTAATTCCGCTTCCCCC
TTTGATTGATTTTGTCTTCTGA--------TTCCTTACCGAGCTCCCTCCGGCAATTTCGTGCTCCGAGTGCCAGTAGTT
TAACTTTAACTCGGAGCTGACGACGAGCTCGTCGTCGAAGATCCAAAAAC-------------AGCTCGCTGTCGAATCA
ACGT---GGATGCGAAGGCTAGCTTCGAGCGAGGTGTCCAATTGCGAAAGCGACCACATCTGAAAGAAGAATTGGATAAA
AGAAATTAGGTGGCACCATTTGTTAAAATGACACAAGTAACTGGGATATTTGGTTGAGACACTTAAGCGTTAAGG----A
TTTT--------TTTAACTTTTTGTTCATGACAGAGCCTCAGATAATA-----AGATAACTAATTAACTACCGTAGTCAC
TGGTAAACCGCGCAATTAAGAACTCGGTGCTATTACCGAGATGTTTCCTAGCAGAGTCTAAGGCTTGCAGCAGGAGCTAC
TGAGATGTTTCCTGGAACTGATTGTGAACATTCGTAGAAGAAACTTGTTAGTAGTATCAGTA---AAAAAAATACTACCA
CCCACAATGATTATGTTTCTGAAAAATTGAAACCATTGGTGTTGCTGA------------TGTGAAGGTACAAGAAGCTC
CAAGTGGCATGGAAGAAGGCGAGGCCGGCGCCGACCACACCAGAGGAAGCCGGGCGCCTCGTGGTGCTGACGCTCAAGAA
CCACCAGAAGGCGGACGTCGACGGCCTCCTCGCCTTCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCACCGC
CGGCCGCCGGTCACCACGCCCCTCCGGCGCAGCACAGCGCCCCCGCGCACAAGCCCCAGGGCGTCAAGTTCGAGCTGCAC
ACGCTCCCGGTGGACGCCAAGGCGGTGGCGGACGGCGACACGGTGACGGTGTACGTGGACACGAATGACGCTCCCAGCGA
GATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGCGCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCA
TCGCCGCCGCGGGATACAGAATGGTTCCCAACGCCAAGGGCGTTGAGGTGCTCGCCAAGAAGTACAGGATCAGGCTAAGG
TA------------------------CTATAATTGATTCAGCGATCAAGATTGGCTGGCTAGTTTGAGTGAATAAGTTCT
GATGAAATGAGATGAAATTGGATGGGATGCAGTGGGATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAC
GGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCCTGACGGTGCACGTCTACAACACCGACCGCTACGGCAGGTCCGTCG
GGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTGAGAAAAGAAACCAAGAACCCATACCTTCAG------TCTTCAGAA
CACCTCAACGCGTGGAAGCAACTTAGA---AAGAACTGCAGCATCAATTTATTGCCATCTACGGAATGTCAGCTTGCGTT
CT-----TGTAGTGGTTGAAAACAGCAGTGTTACGCATAGTAGATGGAGTATTGCACATGGTAGAAGCGAGCTTAAACAA
AACTGTTGCTTCTGCATTCTGCTGGGAACACGTTCAGAAACAGCTATGCCT--TTTTCTGAAAGTCAACGGTTCTACAAA
AAACTTCAGAACATAACAAATTCCCTCTTGCTTTGTCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACAC
CGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAAAATCATCACCAGTCCACATACAGCTCCACACACTA--CACTGATC
ACCTGACTG-AAAAA-GAACCATGGAGATATTCTGAAGTGTCATG-----TGAAATCAAATCATGAAGTTGCTGATAGAA
ACTAATCCTCCCTTTGACCCACCTGCAGTGGCAGAGCCAGGCGCAGGCCGCCCGTAAGGGCCTGTGGGCGGCGTCCAAGC
CGCAGGAGCCGTGGGAGTACAGGAAGGCGAAACGCAACGGCAACGCGTGATCCATCTCCATAGGCCGCACGCAGAGAGTT
CAAGGAGACATATGTTGTAACTGTTGTGTGTATGTGCTGTGACCATGGACAGCTGATTGATTGAT--CGTGGCCTGCCGC
ACTGCAGATCCGTAGCCCAGAGCAGCGCTCGCGCCACTGTACTTTTTATAAGTTAGGTGTGG-------TGAAAAGACTA
GCTGAGCTAGCG-----CGGGGTCGTGAAGCAGAGGAGGCCGGGGCACATTGAGATTGGTTGGTGTGATTGTGTTGTTGT
TGTACCTGGAGATTAATTTGTGTGATTGTGTTGTACATCTCTTACTTGGATTGGACTGTTGTTGTTGTTACTAGACAGAA
AAAGGCTGATTCATAGGCTGCTGTTG-------AGTCGAATACAACTAGCCATATATGCTGATAAACTTATGTTTTTA-C
ACTAATCTTATA--------------------------------------------------------------------
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>chr3B_386
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------------------------------------------------------------TAAATATCTAGCGTTGACAT
CCTCCTCCGTCACCAGGTGCACATGGAAAACAGCCCAAAATATCTCAGAGAGATAGGGAGCCAATACGTACTACTAGTAG
GTGCACATGGAAA----------AAGTCGTGACATGATCCGTCCCTG-TGTCCCTCCCAGCAGCCCAGCGCAGTGAAGAA
AGCGAGTAAAAGCAGATCGGATGTGCAGA----GAACACTGCGTGGGAACTTACACTCAGTGCAGCAGGAGCGATG--CT
TCCTTTCAATCAACTCTATCTATATAATAAATAAACAAACAATAGAGAAGAACATATACACGTAGCAGATGTTGAAAACC
ATGAACAAGCC---------------ATCCCCAATAATTCGCTC----TCTCCAATCCATCCGGGTGCAGCTAGATGAGG
TGAGGTGGCGCAAGAGCACCCACCCGAATTGGCATCGGAAACGGCATATCTCCACCTAGGCATGCCACCTCGCGACGGAG
ACGCTGCTATAATCGGCAAATGGCAAAACTAATCTCAATCACCGAAAGCACCAACCCTACCCTGGAAGAAATCAGTCGGC
AACAGCGACCGGCGGACGACGCCTCGCCGTGCCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTCCAGTTTAGGA
GTATAAAC---CCCGGCGCACACCCCCTGCGCAGGAGGAAATCCCATGC---------CCGCAGCCAATCCCGCGCCCCA
CCTCCACTTGGCAGAGCTCAACAGCTTCCCCCCTCCCCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGGCCGGGATCCCTT
CCGAAACGGCTCTGAGGCGACGCGCACACTGTCATTCA---TCCCGCAGATCCACGCACAACCACCTGAATAATTTACAG
ATCCCGGAGCGGATTTCGCACGGGAACCCGCCGCA---GCCCACCCGCCGCCTCATCCTCCTCCTCCTCGTCGTCGTCGT
CCTAGGGGCCATGGGGAACAGTATTTACAAGTTCCTGTGCGGGGTGTGCTCGGACCTGTCCGACGCCGCCTTCCAGCCGC
ATGGCGCGGACGCCTCCGTCGCCGCGCTCGGCCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTC
GGCCGCCACGTCGTCTCCTCCGCCGCCGCGCAGGCCAACTGGTACTACCTA-------------TAATTCCGCTT-CCCC
TTTGATTGATTTCGTGTTCTGAACTTCCGATTCATTGCCGAGCTCCTTCCAGCAATTTTGTGTTCCGAGTACCAGTAG--
----TTTAACTCGGAGCTGACGACGAGCTCGCCGTCGAAGATCCAGAAAC-------------AGCTCGCTGTCGAA---
-CGTGGAGGATGCGAAGGCGAGCTAGCTTCGAGGTGTCCAATTGCGAAAGCGACCACATCTGAAAGAAGAATTGGATAAA
AGAAATTAGGTGGAACCATTTGTTGAAAGGACGCAAGTAACTGGGATATTTGGTTGAGAAAATTAAGCGTTAAGGATTTA
TTTA--------TTTTACTTTTTGTTCATGACAGAACCTCAGATGGGTGC----GATAACTAATTAACTACCGTAGTTAC
CGGTAAACCAGACAATTAAGAACTCAGTGATATTACTGAGATGTTTCCTAGCAGTTGCTACCCC-TGCAGTAGGAGGTAC
TGATATGTTTCCTGGAACTGATTGTGAACATTCGTAGAAGAAGGTTGTGTGTAGTGTGTGTCAGTGAAAAAGTTCTGCAA
CGCGCTATGATTATTTCTTACAGAATTGAAACC----------GTTGGTGTTGCCGCTGTTGTGAAGGTACAAGAAGCTG
CAAGTGGCATGGAAGAAGGCGAGGCCGGCCCCGACGACGCCGGAGGAAGCCGGCCGCCTCGTGGTGCTGACGCTCAAGAA
CCACCAGAAGGCGGACGTCGACGGCCTCCTCGCCTTCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCACCGC
CGGCCGCCGGTCACCACGCTCCTCCGGCCCAGCACAGCGCCCCCGCGCACAAGCCCCAGGGCGTCAAGTTCGAGCTGCAC
ACGCTCCCGGTGGACGCCAAGGCGGTGGCCGACGGCGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGA
GATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGCGCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCA
TCGCCGACGCCGGGTACAGGATGGTTCCCAACGCCAAGGGCGCCGAGGTGCTCGCCAAGAAGTACAGGATCAGGTTAAGG
TTAGTCTTGTTGCGCCACGCC----------ATTGTTCCGGCGATCAAGATTGGTC------------TGAATAAGTTTT
GATGAGATGAAATGG---GGGATGGGATGCAGTGGGATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAA
GGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCCTGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCG
GGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTGAGAAACCAATT-AAGAACCCATACCTTCAGCTTCAGTCTTCAGAA
CACCTCAACGCGTGGAAGCAACTTAGA---AAGAACTCCAACATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATT
CTTGTACTGTACTAGTTTAATAGTGCTGTGTCACACTA-GTAGA---------------------AGCGAACTTAAAC-A
AACTGTTGCTTCTGCATTCTGCTAGGAACACGTTCAGAAACAGTTAGTAGGCCTTTTCTGAAAGTCAACCGCTCTACAAA
AA-CTTCAGAAGATAACAAATTCCCTCTTGCTTTGTCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACAC
CGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAAAATCATCACCAGTCCACACACAGCTACACGCACTA--CACTGATC
ACCTGACTG-AAAAACGAACCATGGAGAGGTTAATTATGAAGTAGTAATATGGAATCAAATCATGAAGTTGCTGACAGAA
ACTAATCCTCTGTTTGATCCACCTGCAGTGGCAGAGCCAGGCGCAGGCCGCCCGCAAGGGCCTGTGGGCGGCGTCCAAGC
CGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGCAACGGCAACGCGTGATCCGTTTCCACAGGCCGCAAGC------CT
C---GAGACATATGTTGTAACTGTTGTGTGCATGTGCTGTGACCATGGACGGCTGATTGATTGATT-CGTGGCCTGCTGC
GCTGCAGATCCGTAGCCCAGAGCAGCGCTCGCACCACTGTACTTTTTACAAGTTAGGTGTAG-------TGAAAGGACTA
GCTAAGCTAGAA-----CAGGGTCGTGAAGCAGAGGAGGCCGGGGCACATTGAGATTGGTTGGTGTTGTGTTGTTGTTGT
TGTACCTCGTGATTGATTTGTGTGATTGTGTTGTACAACTCTTACTTGGATTGGACTGTTGATGTTGTTTTCTAACAGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr3B_3304
--------------------------------------------------------------------------------
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----------------------------------------------------CGCAAGGACCTGTGGACGGCGTCCAAGC
CGCATGAGCCGTGGGAGTAACAGAAGGCCAAGCGCAACAGTAACGCGTGATCCGTTTCCACATGCGGCAAGGAGAGAGCT
C---GAGACATATGTTGTAACTGTTGTGTGTATGTGCTGTGATCATGGACGGCTGATTGATTGATT-CGTGGCCTGCTGC
ACTGCAGATCCGTAGCCCAGAGCAGCGCTCGCACCACTGTACTTTTTACAAGTTTGGTGTAG-------TGAAAGGACTA
GCTAAGCTAGAACGGAGCAGGGTCGTGAAGCAGAGGAGGCCGGGGCACATTGAGATTGGTTGGTGTCATTGTGTTGTTGT
TGTACTTGGTGATTAATTTGTGTGATTGTGGTGTACAACGCTTACTTGGATTGGACTGTTGCTGTTGTTTTTGAACAGAA
AAATGCTGATTCATAGGTTGTTGTTG-------AGTCGAATGCAGCTACCTATATATGCTGATAAACTTCTGTTTTTGTC
ACTAGTCTTATA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------
>SNPs
S--SS---------------------------------------------------------------------------
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-----------------------------------------------------------------------S----S---
-----------------------------------------S--------------------------S-----------
-----------------------S-------S-S--------------------------------S-------------
-------------S---------------------S-S----------S------------S-S--SSS-----------
S--------S-S-----------------S----S------S-----S-----S--------S---S----S--------
------------------------------S-S------SS---S--------------------S--------------
------------------S----------------------------------------S------SSS----------S
----------S--------------------------S----------------S----S----------S-------S-
--------------------------------------------------------S-----------------------
---------------SSS----SS-SSS-----------------------------S--------------------S-
----------------------------------------------------------------S------S--------
--------------S-----------------S----SS----S--SSS--------SS--------------------S
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SS-S-----------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------SS-SSS------------------S--------------------
---------------------S--S-------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---------S--------------
----------------------------SS---SSS--SSSSSSS-S-SSSSSSSSSSSSSSS-----S-------S---
-------------------------------------------S-----------SS-----S----SS-----SS----
---------------S--S--------------S---S----S-S--S--------------------------------
----SSSSSSSS---------S-S--S-S-SSSSS-SSS-S-SS---S-SSSS-------------------S--S----
----------S------------------------------------------S--------------------------
-----------------S-------------------------------SS----------------------S------
-----------S------------S-------------------------------------------------------
--------------------------S--------------------S--------------------------S-----
---------------------------S-----------------------------------------------S----
-S-----------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SSSS-S-SSSSS-SS-SSSSSSS---------------S---------S----S---S--S---SSS-S-S------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S---S-----------------------------------S
--SS--SS-SSS-----S------SSSSSS--------------------------------------------------
---------S----------------------------S--------------------------------S--S-----
-------------------S--S------S---------------------------------------------S---S
---------------------S----------------------------------------------------------
----------------------------------------------------------S--------S--SS--------
-------S-S--------------------------------------------------S-------------------
--------S------------------------------------------S----------------------------
----------------------------------------------------------SS--------------------
------SS----------------------------------------------------------S-------------
--------------------------------------------------S-S---------SSSSSSS-------S---
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------SSSSSSS-------S----S--------------S-----------------S-
------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2579
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-------------------------------------------------------------------------------T
CCTCCTCCGTCACTAGGTC-------------------------------------------------------------
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>reverse_3545
--------------------------------------------------------------------------------
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------------------------ATACAAGTTCCTGTGCGGGG------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>forward_3009
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-----------------------------TGGTATCGCCAACATCAGGC-------------------------------
--------------------------------------------------------------------------------
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>reverse_5164
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-------------------------------------------TACCTTCAGAGCAGTTCGCC-----------------
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---------------------------------------------
>forward_3917
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---------------------------------------------------------CTGGCTAGCTCACTGTCGAG---
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_5689
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--------CCTCTTTGACCCACCTGCAG----------------------------------------------------
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---------------------------------------------
>forward_3964
--------------------------------------------------------------------------------
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------------------------TCGAGCGAGGTGTCCAATTC------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_5820
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------TCTCGACGCATATGTTGTAAC
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
