>input_sequence_33541
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----------------------------------------------------ATGAACCTGTGGACGGACGACAACGCCT
CCATGATGGAGGCCTTCATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCTGCAGGCCATCATCGAGGGCTCCAGGGAGACCTGGACCTACGCCAT
CTTCTGGCAGTCCTCCACCGACGCCGGCGCCTCGCTCCTCGGCTGGGGCGACGGCTACTACAAGGGCTGCGACGACGCCG
ACAAGCGCCGCCAGCAGCCCACCCCGGCCTCCGCCGCCGAGCAGGAGCACCGCAAGCGCGTCCTCCGGGAGCTCAACTCG
CTCATAGCCGGGGGAGGCGCCGCCGCGCCCGACGAGGCCGTCGAGGAGGAGGTCACGGACACCGAGTGGTTCTTCCTCGT
CTCCATGACCCAGTCCTTCCCCAACGGGATGGGCTTGCCGGGCCAGGCGCTCTTCGCCGGCCAGCCCACCTGGATCGCCA
CGGGGCTCGCCAGCGCGCCCTGCGAGCGGGCCAGGCAGGCCTACACCTTCGGCCTCCGCACCATGGTCTGCATCCCCCTC
GGCACCGGCGTGCTCGAGCTCGGCGCCACCGAGGTCATCTTCCAGACCAACGATAGCTTGGGGAGGATCCGCTCGCTCTT
CAACCTCAACGGCGGAGGAGGGGGCTCTGGATCCTGGCCGCCCATCGCCCCGCCGCCCCAGGAGGCGGAGACGGATCCGT
CCGTGCTCTGGCTCGCCGACGCGCCGGCCGGGGACATGAAGGAGTCGCCGCCGTCCGTCGAGATCTCCGTCTCCAAGCCG
CCGCAGCCACAGCCGCCGCAGATCCATCAGTTCGAGAACGGGAGCACCAGCACGCTCACGGAGAACCCCGGCCTCTCCGT
GCACGCGCAGCAGCCTCCGCCGCAGCAGGCGGCCGCGGCGGCGCAGAGGCAGAACCAGCAC------CAGCTCCAGCATC
AGCACCAGCTCCAGCTCCAGCACCAGCACAATCAGGGTCCTTTCCGCCGGGAGCTCAATTTCTCAGATTTCGCGTCCAAC
GCATCCGTCAAGGTGACCCCGCCTTTCTTCAAGCCTGAGTCTGGTGAGATCCTAAACTTTGGCGCTGACAGCACCAGCCG
GAGGAACCCTTCGCCGGCACCCCCCGCCGCGACGGCCAGCCTCACCACCGCGCCGGGGAGCCTCTTCTCCCAGCACACGG
CGACTGTGACGGCCCCATCAAACGACGCCAAGAACAACCCGAAGCGGTCCATGGAGGCCACCTCCCGCGCGAGCAACACC
AACCACCACCAGACCGCGACAGCCAACGAGGGGATGCTGTCCTTCTCGTCGGCGCCGACGACGCGGCCGTCCACCGGCAC
GGGCGCACCAGCCAAGTCGGAGTCCGACCACTCAGACCTGGAGGCGTCGGTCCGCGAGGTGGAGAGCAGCCGCGTGGTGC
CTCCGCCGGAGGAGAAGCGGCCGCGCAAGCGCGGGCGCAAGCCGGCGAACGGGCGCGAGGAGCCCCTGAACCACGTGGAG
GCGGAGCGGCAGCGGCGAGAGAAGCTGAACCAGCGGTTCTACGCGCTCCGCGCCGTGGTGCCCAACGTGTCCAAGATGGA
CAAGGCCTCGCTGCTCGGCGACGCCATCTCCTACATCAACGAGCTTCGCGGCAAGATGACGGCGCTGGAGTCGGACAAGG
AGACGCTCCATTCCCAAATCGAGGCGCTCAAGAAGGAGCGCGACGCCCGGCCGGCCGCGCCGTCGTCGGGGATGCACGAC
AACGGGGCGCGGTGCCACGCGGTGGAGATCGAGGCCAAGATCCTGGGGCTGGAGGCGATGATCCGCGTGCAGTGCCACAA
GCGCAACCACCCGGCGGCGAAGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCACGCCAGCGTCTCGGTGG
TGAAGGACATCATGATCCAGCAGGTGGCGGTGAAGATGGCCACCCGGGTCTACTCCCAGGACCAGCTCAACGCGGCGCTC
TACGGCCGCCTCGCCGAGCCGGGCACCGCGATGCAAATCCGGTAA-----------------------------------
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>chr1A_1_TraesCS1A01G193200
CGTGTTTAATTTGCTCCCAAAAATTTGGGAAGTGCATGATCACCACCAAATAATATGATGAAAATGTGATCTTATCTTTT
TGTAAGAGAAGTGAATCACTGTGTACCAGTTAAGGACGTCATAAATGTGAACTAACACGACCCAAAGATACCACCCTCAT
TTACA-AAAAAGTAATCTAACGGTCACATGCTTTGGATCTTCGGTCGCCCCCCTATGCTTCCAGTGAAATTTTGCTTGTT
TACCCAGTCCTCCCTTGCGACTCTTTTTCGTGCCGTGATTGGAAAATACCCCCTTCATTTCTAAATATAAATCCTTTTAT
AGAGATTCCAATAGAAAGTACATACATATGTACATAGACAGATTGTAGAGTATAGATTCACTCATTTTGCTTTGTATGTA
GTCCCTTATTGAAAACTCTAGAAAGACTTATTTAGGAATGGAGGGAGTATTTGTTTGAGGGACACATAATTGAAAAGATA
--TAACTCATTCACACAGATAAAACCCACAATAGAATAAGTCACTGGTGGCTGACAGGCGGGCCCATCCATACTGGATAC
CCCAAAGCAGGGGAGGCTAAATCCGATGGATGGGTTAAATCGGTCACTGACAACCCGGGCCCTCGCTCGAGACAGGAGGC
TACGAGCACGGCGGTCACCCCAAAATTCGGGCAGCCAAGCAAGGAGCAGGAAAGAGAGAAGAAACGGCAGCTGCTGCAAG
AACAGCAGCGCAGCAC-AATCAGTGCAGTGATTCCCCTATTTTACCCCGGGCAGCTAAATAAGCAGCGGGGGAGCGAGCG
ACGCATCGGCGGGCGGAGACGTCGACGGCGACCAAACCCGCACAATTTACTACTTTGGGCCTCGCCCCCCGTCTTTCCTC
ACCACCAATCCATTCCCACCTTTCCCATCTCCCCCTCT--------CCACCCTCCCCCCGCGCTTGCTTTCTCTCCCTCC
CATCCATTCCCCTTCCTCCCCCTCCCCGGACCCCGGCCCCGGCCCCGGCCCGATGAACCTGTGGACGGACGACAACGCCT
CCATGATGGAGGCCTTCATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCTGCAGGCCATCATCGAGGGCTCCAGGGAGACCTGGACCTACGCCAT
CTTCTGGCAGTCCTCCACCGACGCCGGCGCCTCGCTCCTCGGCTGGGGCGACGGCTACTACAAGGGCTGCGACGACGCCG
ACAAGCGCCGCCAGCAGCCCACCCCGGCCTCCGCCGCCGAGCAGGAGCACCGCAAGCGCGTCCTCCGGGAGCTCAACTCG
CTCATAGCCGGGGGAGGCGCCGCCGCGCCCGACGAGGCCGTCGAGGAGGAGGTCACGGACACCGAGTGGTTCTTCCTCGT
CTCCATGACCCAGTCCTTCCCCAACGGGATGGGCTTGCCGGGCCAGGCGCTCTTCGCCGGCCAGCCCACCTGGATCGCCA
CGGGGCTCGCCAGCGCGCCCTGCGAGCGGGCCAGGCAGGCCTACACCTTCGGCCTCCGCACCATGGTCTGCATCCCCCTC
GGCACCGGCGTGCTCGAGCTCGGCGCCACCGAGGTCATCTTCCAGACCAACGATAGCTTGGGGAGGATCCGCTCGCTCTT
CAACCTCAACGGCGGAGGAGGGGGCTCTGGATCCTGGCCGCCCATCGCCCCGCCGCCCCAGGAGGCGGAGACGGATCCGT
CCGTGCTCTGGCTCGCCGACGCGCCGGCCGGGGACATGAAGGAGTCGCCGCCGTCCGTCGAGATCTCCGTCTCCAAGCCG
CCGCAGCCACAGCCGCCGCAGATCCATCAGTTCGAGAACGGGAGCACCAGCACGCTCACGGAGAACCCCGGCCTCTCCGT
GCACGCGCAGCAGCCTCCGCCGCAGCAGGCGGCCGCGGCGGCGCAGAGGCAGAACCAGCAC------CAGCTCCAGCATC
AGCACCAGCTCCAGCTCCAGCACCAGCACAATCAGGGTCCTTTCCGCCGGGAGCTCAATTTCTCAGATTTCGCGTCCAAC
GCATCCGTCAAGGTGACCCCGCCTTTCTTCAAGCCTGAGTCTGGTGAGATCCTAAACTTTGGCGCTGACAGCACCAGCCG
GAGGAACCCTTCGCCGGCACCCCCCGCCGCGACGGCCAGCCTCACCACCGCGCCGGGGAGCCTCTTCTCCCAGCACACGG
CGACTGTGACGGCCCCATCAAACGACGCCAAGAACAACCCGAAGCGGTCCATGGAGGCCACCTCCCGCGCGAGCAACACC
AACCACCACCAGACCGCGACAGCCAACGAGGGGATGCTGTCCTTCTCGTCGGCGCCGACGACGCGGCCGTCCACCGGCAC
GGGCGCACCAGCCAAGTCGGAGTCCGACCACTCAGACCTGGAGGCGTCGGTCCGCGAGGTGGAGAGCAGCCGCGTGGTGC
CTCCGCCGGAGGAGAAGCGGCCGCGCAAGCGCGGGCGCAAGCCGGCGAACGGGCGCGAGGAGCCCCTGAACCACGTGGAG
GCGGAGCGGCAGCGGCGAGAGAAGCTGAACCAGCGGTTCTACGCGCTCCGCGCCGTGGTGCCCAACGTGTCCAAGATGGA
CAAGGCCTCGCTGCTCGGCGACGCCATCTCCTACATCAACGAGCTTCGCGGCAAGATGACGGCGCTGGAGTCGGACAAGG
AGACGCTCCATTCCCAAATCGAGGCGCTCAAGAAGGAGCGCGACGCCCGGCCGGCCGCGCCGTCGTCGGGGATGCACGAC
AACGGGGCGCGGTGCCACGCGGTGGAGATCGAGGCCAAGATCCTGGGGCTGGAGGCGATGATCCGCGTGCAGTGCCACAA
GCGCAACCACCCGGCGGCGAAGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCACGCCAGCGTCTCGGTGG
TGAAGGACATCATGATCCAGCAGGTGGCGGTGAAGATGGCCACCCGGGTCTACTCCCAGGACCAGCTCAACGCGGCGCTC
TACGGCCGCCTCGCCGAGCCGGGCACCGCGATGCAAATCCGGTAATGACCGAACTCCATCCACCAGGTAGTAGCAATGAA
ACCGTGATCCTATTACTCACCACCGTATGATCGGCGTCGTCGTCGTCGCCGCCGTCGTTATAGCCCGATGGACATCGAGA
TGGAG-AAAGAAGGCGACGATCGTGCCATGTTGTTGTTGTAAAATCTCTCTTTAGGAGGATGGATGGATGGATGCATGTG
TACATCATCATCATCATCATCATCATCATCATCATCTTGTTGTGTTTTTGCAAGTAGTGTGTTAGCAGAACGAAGCGCCG
GATCCGTCGTTGTTAATTACTGTATCTCATGACCC-TGTGATCGACGACGGTGTATCGTCGGCGTAGTGCTGTTGAACTG
AAACTGTATATAGGACAAAGATGGATTGCCCGTCGCCGTTCTCCTCTAGTGTTGTTGTTGCTGTTGTGTGTATGCATGCA
TCGCTTCTCGTCTTGGCAGAGCGAGCGAGCATGGATGATTGATATGGTATCGCTTGCAAAATGAAATGGATCGGGCGTTC
TTTTTTATCTGCTCGTATGCTTC-------TTGATTGTGTCCTCATCTTGTGCAACTTGGCTAAGAGAAGGCGAAGTGGA
GGTGGGGGGCATGTGATTTGGGTTGGTAGACCTCGACATCATAGGCACAGTGGCAACACTGGCAGAAGAAGAGAAGGATT
AGCGAGGAAGGATGGAGAGGAGAGGAGAGGAGAGGCAAAGCAAGACGTAAGCTGCTCTTGGCAGAACAAAAGGTAACAAG
GAGAGGGAAACCCGTGGGGCCC-GTCCTTCCTTGGCAAAG---AGAAGAGAAGTGGATGAGGATTGAGGAGGAGGGAGGG
AGGGGACACGAGTAGTGTGCGGCTTTTCTTCTTCTTTCATTCAGGCTTAACGAACCAGGCAGACAGACATTGTTGGCGAC
AAGAAGGCAGGCCTACTGTTTGGCGCTGCCTCTCCACATGTCGATGCCACCACCTGATCCATGTCGAGACTCGCCTAATT
TTGTTGTACCCTGGTTAT
>chr1B_2
-GTGTTTAATTCGTTGCCAGAAATTTGGAAAGTGCATTATCACTACCAAATAATATGATGATAATGCGATCTTATCTCTT
TGTAAGAGAAGGGAATCACTGCGTACCAGCTAAGGACGTCATAAATGTGAATTAACATGACCCAAAGATACCACCTTCAT
TTATAGAAAAAAAAATCTAACGGTCACATGTTCTGGATCTTTGGTCGCCCCCCTATGCTTACAGTGAATATTTGCTTGTT
TACCTTGTTCCCCCCTACGGCTCTTTTTTGGGTCGTGATTGCAAAATAATTCCTCCATTTCTAAATATAAGTCTTTTTA-
---GATTTCAATACAAATTACATATGGATGTATAT-GACATATTTTAGAGTGTAAATTCACTCATTTTGTC--GTATGTA
GTCGTTTATTGGAATATCTAAAAAGACTTAGGAAC----GGAGGGAGTATTTGTTTGAGGGACACATAATTAAAAAGAC-
---AACTCATTTACACAGATAAACCCCACAATAGAATAAATCACTGGTGGCTGACAGGCGGACCCATCCATACTGGATAC
CCCAAAGCAGGGGAGGCTAAATCCGATTAATGGGTTAAATTGGTCACTGACAACCCGGGCCCTCGATCCAGACAGGAGGC
TACGAACACGGCGGTTACCCCAAAATTCGGGCAGCCAAAC--GAGG-AGGAAAGAGAGAAGAAACGGCAGCTGCTGCAAG
AACAGCAGAGCAGCAC-AATCAGTGCAGTGATTCCCCTATTTTACCCCGGCCAGCTAAATAAGCAGCGAGCGGGGGAGCG
ACGCATCGGCGGGCGGAGACGTCGACGGCGACCAAACCCGCACAATTTACTACTTTGGGCCTCGCCTCCCATCTTTCCTC
ACCACCAATCCATTCCCACCTTTCCCATCTCCCTCTCT--------CCACCCT-CCCCCGCGCTTGCTTTC----TCTCC
CATCCATTCCCCTTCCTCCCCCTCCCCTGA------CCCCGGCCCCGGCCCGATGAACCTGTGGACGGACGACAACGCCT
CCATGATGGAGGCCTTCATGGCCTCCGCCGACATGCCGGCCTTCCCATGGGGCGCGGCGGCCACCCCGCCGCCGCCGGCC
GCCGTCCCGCAGCAGCCGGCCTTCAACCAGGACACGCTGCAGCAA-----------------------------------
--------------------------------------------------------------------------------
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------------------------------CGCCTGCAGGCCATCATCGAGGGCTCCAGGGAGACCTGGACCTACGCCAT
CTTCTGGCAGTCCTCCACCGACGCCGGCGCCTCGCTCCTCGGCTGGGGCGACGGCTACTACAAGGGCTGCGACGACGCCG
ACAAGCGCCGCCAGCAGCCCACCCCGGCCTCCGCCGCCGAGCAGGAGCACCGCAAGCGCGTCCTCAGGGAGCTCAACTCG
CTCATAGCCGGGGGAGGCGCCGCTGCGCCCGACGAGGCCGTCGAGGAGGAGGTCACGGACACCGAGTGGTTCTTCCTCGT
CTCCATGACCCAGTCCTTCCCCAACGGGATGGGCTTGCCGGGGCAGGCGCTCTTCGCCGGCCAGCCCACCTGGATCGCCA
CGGGGCTCGCCAGCGCGCCCTGCGAGCGGGCCAGGCAGGCCTACACCTTCGGCCTCCGCACCATGGTCTGCATCCCCCTC
GGCACCGGCGTGCTCGAGCTCGGCGCCACCGAGGTCATCTTCCAGACCAACGATAGCTTGGGGAGGATCCGCTCGCTCTT
CAACCTCAACGGCGGAGGAGGGGGCTCTGGATCCTGGCCGCCCGTGGCGCCGCCGCCGCAGGAGGCGGAGACGGATCCGT
CCGTGCTCTGGCTCGCCGACGCGCCGGCCGGGGACATGAAGGAGTCACCGCCGTCCGTCGAGATCTCCGTCTCCAAGCCG
CCGCCGCCACAGCCGCCGCAGATCCATCACTTCGAGAACGGGAGCACCAGCACGCTCACGGAGAACCCCAGCCTGTCCGT
GCACGCGCAGCAGCCTCCGCCACAGCAAGCGGCTGCGGCGGCGCAGAGGCAGAACCAGCAC------CAGCTCCAGCATC
AGCACCAGCTCCAACTCCAGCACCAGCACAACCAGGGCCCTTTCCGCCGGGAGCTCAATTTCTCAGATTTCGCGTCCAAC
GCATCCGTCACGGTGACCCCGCCTTTCTTCAAGCCCGAGTCTGGTGAGATCCTAAACTTTGGCGCTGACAGCACCAGCCG
GAGGAACCCTTCGCCGGCGCCCCCCGCCGCGACGGCCAGCCTCACCACCGCGCCGGGGAGCCTCTTCTCCCAGCACACGG
CGACTGTGACGGCCCCATCAAACGACGCCAAGAACAACCCGAAGCGGTCCATGGAGGCCACCTCCCGCGCGAGCAACACC
AACCACCACCAGACCGCCACAGCCAACGAGGGGATGCTGTCCTTCTCGTCGGCGCCGACGACGCGGCCGTCCACCGGCAC
GGGCGCGCCAGCCAAGTCGGAGTCCGACCACTCCGACCTGGAGGCGTCGGTCCGCGAGGTGGAGAGCAGCCGCGTGGTGC
CTCCGCCGGAGGAGAAGCGGCCGCGCAAGCGCGGGCGCAAGCCGGCGAACGGGCGCGAGGAGCCCCTGAACCACGTGGAG
GCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGCGGTTCTACGCGCTCCGCGCCGTGGTGCCCAACGTGTCCAAGATGGA
CAAGGCGTCGCTGCTCGGCGACGCCATCTCCTACATCAACGAGCTCCGCGGCAAGATGACGGCGCTGGAGTCGGACAAGG
AGACGCTCCATTCCCAAATCGAGGCGCTCAAGAAGGAGCGCGACGCCCGGCCGGCCGCGCCGTCGTCGGGGATGCACGAC
AACGGGGCGCGGTGCCACGCGGTGGAGATCGAGGCCAAGATCCTGGGGCTGGAGGCGATGATCCGCGTGCAGTGCCACAA
GCGCAACCACCCGGCGGCGAAGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCACGCCAGCGTCTCCGTGG
TGAAGGACATCATGATCCAGCAGGTGGCGGTGAAGATGGCCACCCGGGTGTACTCGCAGGACCAGCTCAACGCGGCGCTC
TACGGCCGCCTCGCCGAGCCGGGCACCGCGATGCAAATCCGGTAATGATCGAATCCCATCTACCAGGTAGTAGCAAGGAA
ACCGCGATCCTATTACTCACCACCGTATGATCGGCGTCGTCGTCGTCGCCGTCGT---TATAGCCCGATCGACATCGAGA
TGGAG-AAAGAAGGCGACGATCA--------TGTTGTTGTAAAATCTCTCTTTAGGAGGATGGATGGATGGC----TGCA
TGTGTA--------------CATCATCATCATCATCTTGTTGTGTTTTTGCAAGTAGTGTGTTAGCAGAACGAAGCGCCG
GATCCATCGTTGTTAATTA-----TCTCATGACCC-TGTGATCGATGACGATGATGTATCGGCGTAGCGCTGTTGAACTG
AAAATGTATATAGGACAAAGATGGATTGCCCGTCGCCGTTCTCCCCTAGTGTTTGT-----TGTTGCGTGTATGCATGCA
TCGTTTCTCGTCTTGGCAGAG----CGAGCATGGATGATTGATATGGTATCGCTTGCAAAATGAAATTGATCGGGCGTTC
TTTTTTATCTGCTCGTATGCTCTTAAATCTTTGATTGTGTTCTCATCTTGGGCAACTTGGCTAAGAGAAGGCGAAGTGGA
GGTGGGGGGCATGTGATTTGGGTGGGTAGACCTCGACATCATAGGCACAGTGGCAACACTGGTGGAAGAAGAGAAGGATT
AGCGAGGGAGGAC---------AGGAGGGGAGAGGCAAAGCAAGACGTAAGCTGCTCTTGGCATAACAAAAGGTAGCGAG
GAGAGGGGAACCCGTGGGGCCC-GTCCTTCTTTGGCAAGGAGAAGAAGAGAAGTGGATGAGGAGGAGC---GAGGGAGGG
AGGGGACACGAGTAGCGTGCGGCTTTTCTTCTTCTTTCATTCAGGCTTAACGAACCAGGCAGACAGACGTCGCTGGCGAC
AAGAAGGCAGGCCTACTGTTTAGCGCTGCCTCTCCACATGCCGATGCCACCACCTGATCCATGTCGAGAGTCGCCTAATT
TTGTTGTACCCTG-----
>chr1D_424
GACTTATAATTAAAAA----------------------------------------------------------------
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---------------------------------------GGAGGGAGTATTTGCTTGAGGAACTTATAATTAAAAAGAGG
AGTAACTCATTTACACAGACAAACCCCACAATAAAATAAATCACTGGTGGCTGACAGGCGGGCCCATCCATACTGGATAC
CCCAAAGCAGGGGAGGCTAAATCCGATTAATGGGTTAAATCGGTCACTGACAACCCGGGCCCTCGCTCGAGACAGGAGGC
CACGAACACGGCGGTTACCCCAAAATTCGGGCAGCCAACAAGGAGG-AGGAAAGAGAGAAGAAACGGCAGCTGCTGCAAG
AACAGCAGAGCAGCACAAATCAGTGCAGTGATTCCCCTATTTTACCCCGGCCAGCTAAATAAGCAGCGGGGGAGCGAGCG
ACGCATCGGCGGGCGGAGACGTCGACGGCGACCAAACCCGCACAATTTACTACTTTGGGCCTCGCCTCCCATCTTTCCTC
CCCACCAATCCATTCCCACCTTTCCCATCTCCTCCTCTCTCTCCACCCACCCTCCCCCCGCGCTTGCTTTC----CCTCC
CATCCATTCCCCTTCCTTCCCCTCCCCGGA------CCCCGGCCCCGGCCCGATGAACCTGTGGACGGACGACAACGCCT
CCATGATGGAGGCCTTCATGGCCTCCGCCGACATGCCGGCCTTCCCCTGGGGCGCTGCGGCCACCCCGCCGCCGCCGGCC
GCCGTGCCGCAGCAGCCGGCCTTCAACCAGGACACGCTGCAGCAG-----------------------------------
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------------------------------CGCCTGCAGGCCATCATCGAGGGCTCCAGGGAGACCTGGACCTACGCCAT
CTTCTGGCAGTCCTCCACCGACGCCGGCGCCTCGCTCCTCGGCTGGGGCGACGGCTACTACAAGGGCTGCGACGACGCCG
ACAAGCGCCGCCAGCAGCCCACCCCGGCCTCCGCCGCCGAGCAGGAGCACCGCAAGCGCGTCCTCCGGGAGCTCAACTCG
CTCATAGCCGGGGGAGGCGCCGCCGCGCCCGACGAGGCCGTCGAGGAGGAGGTCACGGACACCGAGTGGTTCTTCCTCGT
CTCCATGACCCAGTCCTTCCCCAACGGGATGGGCTTGCCGGGCCAGGCGCTCTTCGCCGGCCAGGCCACCTGGATCGCCA
CGGGGCTCGCCAGCGCGCCCTGCGAGCGGGCCAGGCAGGCCTACACCTTCGGCCTCCGCACCATGGTCTGCATCCCCCTC
GGCACCGGCGTGCTCGAGCTCGGCGCCACCGAGGTCATCTTCCAGACCAACGATAGCTTGGGGAGGATCCGCTCGCTCTT
CAACCTCAACGGCGGAGGAGGGGGCTCTGGATCCTGGCCGCCCATCGCGCCGCCGCCGCAGGAGGCGGAGACGGATCCGT
CCGTGCTCTGGCTCGCCGACGCGCCGGCCGGGGACATGAAGGAGTCGCCGCCGTCCGTCGAGATCTCCGTCTCCAAACCG
CCGCCGCCACAACCGCCGCAGATCCATCACTTCGAGAACGGGAGCACCAGCACGCTCACGGAGAACCCCAGTCTCTCCGT
GCACGCGCAGCAGCCTCCGCCCCAGCAGGCGGCTGCGGCGGCGCAGAGGCAGAACCAGCACCAGCAGCAGCTCCAGCATC
AGCACCAGCTCCAGCTCCAGCACCAGCACAACCAGGGTCCTTTCCGCCGGGAGCTCAATTTCTCAGATTTCGCGTCCAAC
GCATCCGTCACGGTGACCCCGCCTTTCTTCAAGCCCGAGTCTGGTGAGATCCTAAACTTTGGCGCTGACAGCACCAGCCG
GAGGAACCCTTCGCCGGCGCCCCCCGCCGCGACGGCCAGCCTCACCACCGCGCCCGGGAGCCTATTCTCCCAGCACACGG
CGACTGTGACGGCCCCGTCAAACGACGCCAAGAACAACCCGAAGCGGTCCATGGAGGCCACCTCCCGCGCGAGCAACACC
AACCACCACCAGAACGCCACAGCCAACGAGGGGATGCTGTCCTTCTCGTCGGCGCCGACGACGCGGCCGTCCACCGGCAC
GGGCGCGCCAGCCAAGTCGGAGTCCGACCACTCCGACCTGGAGGCGTCGGTCCGCGAGGTGGAGAGCAGCCGCGTGGTGC
CTCCGCCGGAGGAGAAGCGGCCGCGCAAGCGCGGGCGCAAGCCGGCGAACGGGCGCGAGGAGCCCCTGAACCACGTGGAG
GCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGCGGTTCTACGCCCTCCGCGCCGTGGTGCCCAACGTGTCCAAGATGGA
CAAGGCCTCGCTGCTGGGCGACGCCATCTCCTACATCAACGAGCTCCGCGGCAAGATGACGGCGCTGGAGTCGGACAAGG
AGACGCTCCACTCCCAAATCGAGGCGCTCAAGAAGGAGCGCGACGCCCGGCCGGCCGCGCCGTCGTCGGGGATGCACGAC
AACGGGGCGCGGTGCCACGCGGTCGAGATCGAGGCCAAGATCCTGGGGCTGGAGGCGATGATCCGCGTGCAGTGCCACAA
GCGCAACCACCCGGCGGCGAAGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCACGCCAGCGTGTCCGTGG
TGAAGGACATCATGATCCAGCAGGTGGCGGTGAAGATGGCCACCCGGGTCTACTCCCAGGACCAGCTCAACGCGGCGCTC
TACGGCCGCCTCGCCGAGCCGGGCACCGCGATGCAAATCCGGTAATGACCGAATGCCATCCACCAGGTAGTAGCAATGAA
ACCGTGATCCTATTACTCACCACCGTATGATCGGCGTCGTCGTCGTCGCCGTCGT---TATAGCCCGATGGACATCGAGA
TGGAGAAAAGAAGGCGACGATCGTTCCATGTTGTTGTTGTAAAATCTCTCTTTAGGAGGATGGATGGATGGATGGATGCA
TGTGTA-----------------CATCATCATCATCTTGTTGTGTTTTTGCAAGTAGTGTGTTAGCAGAACGAAGCGCCG
GATCCATCGTTGTTAATTA-----TCTCATGACCCCTGTGATCGACGACGG---TGTATCGGCGTAGCGCTGTTGAACTG
AAACTGTATATAGGACAAAGATGGATTGCCCGTCGCCGTTCTCCTCTAGTGTTGTTG---CTGTTGTGTGTATGCATGCA
TCGCTTCTCGTCTTGGCAGAG----CGAGCATGGATGATTGATATGGTATGGCTTGCAAAATGAAATGGATCGGGCGTTC
TTTTTTATCTGCTCGTATGCTTC-------TTGATTGTGTTCTCATCTTGTGCAACTTGGCTAAGAGAAGGCGAAGTGGA
GGTGGGGGGCATGTGATTTGGGTGGGTAGACCTCGACATCATAGGCACAGTGGCAACACTGGTGGAAGAAGAGAAGGATT
AGCGAGGA--------------AGGAGAGGAGAGGCAAAGCAAGACGTAAGCTGCTCTTGGCATAACAAAAGGGAACGAG
GAGAGGGGAACCCGTGGGGCCCCGTCCTTCCTTGGCAAGG---AGAAGAGAAGTGGATGAGGAGGAG-------GGAGGG
AGGGGACACGAGTAGCGTGCGGCTTTTCTTCTTCTTTCATTCAGGCTTAACGAACCAGGCACACAGACATTGTTGGCGAC
AAGAAGCCAGGCCTACTGTTCGGCGCTGCCTCTCCACATGCCGATGCCACCACCTGATCCATGTCGAGACTCGCCTAATT
TTGTTGTACCCTGGTTAT
>SNPs
S----------S-S-S---S--------S--------S-----S-----------------S----S----------S--
-----------S---------S-------S---------------------S-----S-----------------S----
---S-------SS-----------------S-S--------S------------------S-------SS----------
----SS--S-S---S-S--S--------S-S-S--------S------SSS---S---------------S--S-----S
SSS----S-----S---S------SSS-----S--S----S---S------S--S--------------SSSS-------
---SS------S--SS----S---------SSS-SSSSS--------------------------------S------SS
-----------S-----------S---------------S----------------------------------------
---------------------------SS---------------------------------------------------
-----S---------S----------------------S--S-SS-S---------------------------------
--------S-----------------------------------------S-----------------------------
------------------------------------------------------------------S---S---------
-----------------------------------------------------------------------SSSS-----
------------------------------SSSSSS--------------------------------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
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------------------------------------------------S--------S----------------------
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----S------------------------S---------------------------------------S----------
---------------------S-----------S----------------------------------------------
-------------------------------S------------------------------------------------
----------S------------------------S--------------------------------------------
------------------S-------------------------------------------------------------
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-----------------S--------------------------------------------------------------
------S--------------------------S----------------------------------------------
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-----------------S--------------------------------------------------------------
---------------------------------------------S----------------------------------
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---------------------------------------------------------------------------S----
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-----------------------------------------------------SS-------------------------
---------------------------------------------------S---SSS----------------------
------------------------S-------------------------------------------------S---SS
-SSS-SSSSSSSSSSSSSSS------------------------------------------------------------
-----S-------------SSSSS-----------------------------SSSSS---------S------------
---------------------------------------------------------SSS--------------------
---------------------SSSS-------------------------------------------------------
----------------------------------------S---------------------------------------
-----------------------S--------------------------------------SS----------------
------------SSSSSSSSSS-----------------------------------------S-------------S--
-------S------------------------------S------------------------SSSSSSSS---------
---------------S----------------------------------------------------------------
----------------------------------------S---------------------------------------
------------------
>forward_589
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---------GGGGAGGCTAAATCCGATGG---------------------------------------------------
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>reverse_2190
--------------------------------------------------------------------------------
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-----------------------------GTTCGAGAACGGGAGCACC--------------------------------
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>forward_679
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-------------------CCAAAATTCGGGCAGCCAAG-----------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2658
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GACAGCCAACGAGGGGATG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TTCCCCTATTTTACCCCGGG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2727
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACCAGCCAAGTCGGAGTCC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_2436
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CCCGCCTTTCTTCAAGCCT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_4099
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGAGAGGAGAGGAGAGGCAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
