>input_sequence_33536
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------------------------------------------------------------ATGGCG------CTGCGTAA
CCTTGTGACCAGGATGGGGACCCCGGCCGCCGCCGCTCTCCGGCCGCCGTCGGTATCCCGCGGGGCGCAGGCGGCGCGCT
CTCGGCCCTTCTCCCGTCAGGTTCGTTCCCCGCTCCCTGTGCCCGCTCGGAGAAT-CGCATTGCGTATGTGTCGATATGC
TCGTCCAGTCAATCCGGATCGAGGTCTCTTGATTTTGGCGGCGCTCCTCGCCTGCCGCGTAAAATACACCGTGCTCTGAA
GCGTTAGATGTACACAACACCCTCTTTGGATGGATCCTCAGTCTAAGGCCATGTTCGTCTCCTGGGAATCAATGCCTCTT
GCCACCCTTTTCCCATAGCCTGTTCATCCAATTCGATCTGGCAGTGATATAGTCGCTGATCACCTTAATAAATTTTCTAA
AAAAAAGTTGCAGTAATGGAATGAACCATAACATTCTTATGGTCTGTCAGACAGGATAATGAAATTTCAGTTAGTTCATT
ATTACTACATCCAAATTCATTGTTAGGTATTAACATCAGATCAATACGGTACTAACTAACAAAAAGATTTATGAATGGGT
GTGTCTTGATTGTATCTGAAGAAGCACTGTGGATTAAGGGCTTGTCTTCCAGACAATAAAACTGCTATCATCACCACATC
CAAGCAGTTTCATGTGGAAACTTTTCTGAAATATACGAAAACAGAAGCATAATAAAGCGAACACCTTCCCTTTATAAATG
ATGCAGATCGGGA-TGGGTCAGATTTATTTATCCTGCAAGTTAGGATAATATACTGCTTGAGAAAACGATTTAATAGTAT
AAGATTTCGACTGATATATGGTGTGCTCCTTGAATGACTGCAGTCAATAGTTAATGCTGTTGGAAATTCTAATTAATAGA
TTCGATAATGAATTACTATGCAACACATGATATCTACAAGTCATAAATCTGTAAACTTGAATAAACAGAAGAACATAATG
CATTGAAAATTACCCTCAGGTAGCACAGATTATCAGTGAACACCAGATTACGTAAGACTCGTCACACATCATTTTTTTTT
TTTGTCCTTGCAAAAAGGAGCTAAAGGCTACCGAGGAACAGTACACCCGCTGTAGACTATATCATCCTTGAGTGC-AAAA
GTAGGTGTTTCAAAACAAGGGAGGG-GGGAGAATATTTCCATCACAAAAACAGGCCTGTGCTCTCTCTTGGATTGTCCTT
TTAACCTGCATCCGTATCTTTACGAGGGGCATCTTTAGAACTGAGTGGCAACTCAAGTTAGACCATGTTGTAATTGATGT
TAGTTCTTACTCGCTTGAATGCCTTTCTGAAGCAGTGAAGCATCTAGGTTAGTTTGTGAGATGAATGGGTACTTGGATAG
GCTGACAAAGTTGCTATTAAAGATGTCAGAAAAGGTTAAATGTTGATTAATCCCCTTCTTCTGTCCACTGAGATACCATA
CCATTTGCTGTGTATTGTTGCAAAACAGTACCAAATCAGCAATACATAGGAAGGCAAATACTACTTGAGCCACCTTTTAA
CATGATTGCAACATCCTGTGATTACCTTGGCATAGTATGGTTAATGATAAAAGCATCTTGGTAGTTTTTCAGAAAAATGG
GTACTTGAGTAGAGTCAATAGACTGACAAAGCTGCAATTATATAAAGATGTGAGATGCGGTCAAGTGGTGATCAGTGCTT
TTTT-TTTCTACCGACTTGGAAGCCTTCTGCATGATTGCAAATTC-----------------------------------
--ATACACAAAGGACAAAGAATAGAATTAAAACAGATACAGGTTAAACTGAGTATATTAGGTATAACAAGCATTTCATTC
TTGTAGAATAAATAATTGGATTTTGATTAAGTTATTTTTGAAGGGAAAGAAGGTACTACCTTTGAGAATGTCTCAGCACC
CTCTGTTGGTTTTAGCATACTACTGTTGTTGATGTGCTTGCGTGATATAAGCAGATTCAAGATAACACTATTGAATGATA
TATTTCGTGGGACTTGAGCAAATTCAAGACGGCATTGCTTGCAAAATTTTGTCATCATTTACACTGCACGTTGACATCCG
AGCTTATATCGTGTTATCACTGAATTGTAGGTTGAACACGAGGATATTTCCAAGATACGTGCTAAAAAGAAGTATGAGTT
CAGTCTGTTCCTCCTTGAACGGTCAGAAAAACAGCTGGAGTCTGCGAAGTATGCGACCATAATTTATTCGTCAGATGCTT
TTGGCTACAATTAGTATTAGATGATTTGAACTGAGACCCTAATGCTATGGTTTCTGCACTCTTTTTCTTGAAGGGTCTGG
GCTCAGAGGTTTCAAAGGGCAGACAAGTACCTGGGTTGGACTCTCAAGGTGGTCATGCCTGCTTCTCTTGTGGCTGTGAT
AGCAGGGTCCAAGTAG----------------------------------------------------------------
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>chr5A_1_TraesCS5A01G522500
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCACACTGGACAGCTGTTAAAAGAATTATAAGATAC
ATAAAGCATACTGCAAGTTTGGGTCTCCAGTTCAGACGTTCTAGTTCTACTCTTGTTAGTGCATTTTCTGATATTGACTG
GGCAGGATGCAGCGATGACAGAAAATCAACTGGAAGCTTTGCAGTATTTTTTGGCTCTAATCTTATCTCCTGGAGTGTCA
GAAAACAAGCCACGGTGTCGAGATCAAGTACAGAAGTTGAGTACAAATCCTTAGCAAATGCCATTGCTGAGATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACGTTGTATATTTTGTTTATGGTGTGACAATTTAGGAGCAACCTA
TTTTTCTGCTAATCCAGTTTTTCATGGTAGAACCAAACATATTGAAATTGACTTTTATTTTGTGAGAGAAAGGATTGCAG
AGAAGAAGTTGGACATACGATTTATTCCTTTCAAAGATCAAGTGGCAGACGGGTTCACCAAAGCCCTTCCAGCAAGACCG
TTTGAGAAGTTCAAGAGAAACTTAAATATAAGATAGTTTACATTAAGGGAGAATGTT--AAGATTCAGTTTAAACCACGT
TGTAATCTCAAACTCTTCTTATTTCTATTCCCTCTCGTGTTTCTCTTGTTCTT-TATATGTACC----ACTGTATCCTAA
CGATCGGC-TTCAACTTGTACGCCACGAACGAATAGGGGCTTTTCCTGTCGCATATAAATAAAGATCAAGCGGCTCCTTA
TGAGGAGTGGAAATGTTTCCAAAGTTTACAAGGTAAGAAGGCTTTAAAAAAGATAAAAAAAGGCAAGGCGATGGATCCTG
ATTGTATCCCATTGAGGTGTGGAAAGGCCTTGAAGACATAGCGAGCGGAGAGAAAAAAAAAAGGAGCGGAACGAGGCTTG
GAGAGAGAAGAGACCAAACCCG------------ATCGATCGATCGCCGCATCTCACCTCATGGCG------CTGCGTAA
CCTTGTGACCAGGATGGGGACCCCGGCCGCCGCCGCTCTCCGGCCGCCGTCGGTATCCCGCGGGGCGCAGGCGGCGCGCT
CTCGGCCCTTCTCCCGTCAGGTTCGTTCCCCGCTCCCTGTGCCCGCTCGGAGAAT-CGCATTGCGTATGTGTCGATATGC
TCGTCCAGTCAATCCGGATCGAGGTCTCTTGATTTTGGCGGCGCTCCTCGCCTGCCGCGTAAAATACACCGTGCTCTGAA
GCGTTAGATGTACACAACACCCTCTTTGGATGGATCCTCAGTCTAAGGCCATGTTCGTCTCCTGGGAATCAATGCCTCTT
GCCACCCTTTTCCCATAGCCTGTTCATCCAATTCGATCTGGCAGTGATATAGTCGCTGATCACCTTAATAAATTTTCTAA
AAAAAAGTTGCAGTAATGGAATGAACCATAACATTCTTATGGTCTGTCAGACAGGATAATGAAATTTCAGTTAGTTCATT
ATTACTACATCCAAATTCATTGTTAGGTATTAACATCAGATCAATACGGTACTAACTAACAAAAAGATTTATGAATGGGT
GTGTCTTGATTGTATCTGAAGAAGCACTGTGGATTAAGGGCTTGTCTTCCAGACAATAAAACTGCTATCATCACCACATC
CAAGCAGTTTCATGTGGAAACTTTTCTGAAATATACGAAAACAGAAGCATAATAAAGCGAACACCTTCCCTTTATAAATG
ATGCAGATCGGGA-TGGGTCAGATTTATTTATCCTGCAAGTTAGGATAATATACTGCTTGAGAAAACGATTTAATAGTAT
AAGATTTCGACTGATATATGGTGTGCTCCTTGAATGACTGCAGTCAATAGTTAATGCTGTTGGAAATTCTAATTAATAGA
TTCGATAATGAATTACTATGCAACACATGATATCTACAAGTCATAAATCTGTAAACTTGAATAAACAGAAGAACATAATG
CATTGAAAATTACCCTCAGGTAGCACAGATTATCAGTGAACACCAGATTACGTAAGACTCGTCACACATCATTTTTTTTT
TTTGTCCTTGCAAAAAGGAGCTAAAGGCTACCGAGGAACAGTACACCCGCTGTAGACTATATCATCCTTGAGTGC-AAAA
GTAGGTGTTTCAAAACAAGGGAGGG-GGGAGAATATTTCCATCACAAAAACAGGCCTGTGCTCTCTCTTGGATTGTCCTT
TTAACCTGCATCCGTATCTTTACGAGGGGCATCTTTAGAACTGAGTGGCAACTCAAGTTAGACCATGTTGTAATTGATGT
TAGTTCTTACTCGCTTGAATGCCTTTCTGAAGCAGTGAAGCATCTAGGTTAGTTTGTGAGATGAATGGGTACTTGGATAG
GCTGACAAAGTTGCTATTAAAGATGTCAGAAAAGGTTAAATGTTGATTAATCCCCTTCTTCTGTCCACTGAGATACCATA
CCATTTGCTGTGTATTGTTGCAAAACAGTACCAAATCAGCAATACATAGGAAGGCAAATACTACTTGAGCCACCTTTTAA
CATGATTGCAACATCCTGTGATTACCTTGGCATAGTATGGTTAATGATAAAAGCATCTTGGTAGTTTTTCAGAAAAATGG
GTACTTGAGTAGAGTCAATAGACTGACAAAGCTGCAATTATATAAAGATGTGAGATGCGGTCAAGTGGTGATCAGTGCTT
TTTT-TTTCTACCGACTTGGAAGCCTTCTGCATGATTGCAAATTC-----------------------------------
--ATACACAAAGGACAAAGAATAGAATTAAAACAGATACAGGTTAAACTGAGTATATTAGGTATAACAAGCATTTCATTC
TTGTAGAATAAATAATTGGATTTTGATTAAGTTATTTTTGAAGGGAAAGAAGGTACTACCTTTGAGAATGTCTCAGCACC
CTCTGTTGGTTTTAGCATACTACTGTTGTTGATGTGCTTGCGTGATATAAGCAGATTCAAGATAACACTATTGAATGATA
TATTTCGTGGGACTTGAGCAAATTCAAGACGGCATTGCTTGCAAAATTTTGTCATCATTTACACTGCACGTTGACATCCG
AGCTTATATCGTGTTATCACTGAATTGTAGGTTGAACACGAGGATATTTCCAAGATACGTGCTAAAAAGAAGTATGAGTT
CAGTCTGTTCCTCCTTGAACGGTCAGAAAAACAGCTGGAGTCTGCGAAGTATGCGACCATAATTTATTCGTCAGATGCTT
TTGGCTACAATTAGTATTAGATGATTTGAACTGAGACCCTAATGCTATGGTTTCTGCACTCTTTTTCTTGAAGGGTCTGG
GCTCAGAGGTTTCAAAGGGCAGACAAGTACCTGGGTTGGACTCTCAAGGTGGTCATGCCTGCTTCTCTTGTGGCTGTGAT
AGCAGGGTCCAAGTAGGCGATCAAATGTCCATTCGCTGTTTTGTTTATTGATGATGGCATGTGTTATGTACGGGCGCTCT
ACTTATGGCTCTTGTGCACTTTGTCTATAGCATGTTATGTAAGTCTCGGCTTATGGCGGTTCGAATATGATCACTATGAT
GATGAT---AACATTACCTGGTGAAAGATGAGCCGGGCAGTTTTATTAATGCAGCAGAACATATTGTTGTCCTGAAAATA
---AATCATATGAGACTTGGGTTAAAATCAGATTAGACAGATCC-----TCTTGTGCACATGACATGGTCTATTGAAATT
AGAGAACATATTTAAATTGCTAGGACATGATCTAGAAGAGCAGGGTGGGACTATTAATCACAAAAGTAGTATCTAATTTT
AGCANNNNNNNNNNATGGAGCGATTTTTTTAGTAGCGGACCATAACAGAAATATAAATTCTGGCCCATCTAATCTCCAAA
CCACACGTACGAAACCGAACGGCAACGTACGAAACTTTACAGACCGAAAACGAACGAAATTACGGTGGCAAGAAGCAATA
GCTCTTTCTTTTATTAGTAGGTATAGATATAGATT---------------------------------------------
----------------------------------------------AGAGGGAGAACTAACGA-----CAGGTATGGGCG
TGCTCACCCAGGCCTCCATGGGCCACGCACATCAAGGTGGCGGATGAAGTTTTATTTTGTTTTGTTATTT-TTTTCCTTT
TCCTTTTTTT-CCTTATATATTTTATGAAATATTCGATATATTCTATATGTATCATAAAATTATTAATTTAACGATTGTA
TAAAACCGGATAAAAACATTAAAAAGTGCCAATTTTGTTTATGTGACTGAGAGAAATGTTCTTACATTCTAGAAAAATCA
TTTAAATAGAAAAAATACACACACATTATG---TAATTTAAATTCTTTGCGCATAAAAATAAATGTTGATGTAATTCAAA
GTGTTCACACATTTTAAAACGTGTGATTTTTAAAA-GATTCACAAAATTTAGATTTTTTGCACTCGTGTTTCAAAAATGT
GCATGGCAT
>chr6D_1
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCACACTGGACAACTGCTAAAAGAATTATAAGATAC
ATAAAGCATACTGCAAGTTTGGGTCTCCAGTTCAGACGTTCTAGTTCTACTCTTGTTAGTGCATTTTCTGATGCTGACTG
GGCAGGATGCAGTGATGACAGAAAATCAACTGGAGGCTTTGCAGTATTTTTTGGCTCTAATCTTATCTCCTAGAGTGCCA
GAAAACAAGCCACGGTGTCAAGGTCAAGTACAGAAGCTGAGTACAAATCCTGAGCAAATGCCACTGCTGAGATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACATCGTACATCATGTTTATGGTGTGACAATTTGGGAGCAACCTA
TCTTTCTGCTAATCCGGTTTTTCATGGCAGAACCAAACACATTGAAATTGACTTTCATTTTGTGAGAGAAAGGGTTGCAA
AGAAGAATTTGGACATACGGTTTATTCCGTCCAAAGATCAAGTGGCAGACGGGTTCACCAAAGCCCTTCCAGCAAGGCCG
TTTGAAGAGTTCAAGAGAAACTTAAATATAGGGTAGTTTAGATTAAGGGAGGGTGTTAGAAGATTCAGTTTAAACCACGT
TGTAATCTCAAACTCCCCTTATCTCTATTCCCTCTCGTGTTCCTCTTGTTCTC-TATATGTACC----GCTGTATCCTAG
CGATCGGC-CTCAACTTGTACGCC----ACCAACAGGGGCTCTTCCTGTCGCATATAAATAAAGATCACGCGGCTCCTTA
CGAGGAGTAGGAACACTTCCAAAGTTTACA--------------------------------------------------
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>chr7A_1
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCAAACTGGACAGCTGTTAAAAGAATTATAAGATAC
ATAAAGCATACTGCAAGTTTGGGTCTTCTGTTTAGACGTTCGAGTTCTACTCTTGATATTGCATTTTCTGATGTTGACTG
AGAAGGACGTAGTGATGACAGAAAATCAACTAGAGGTTTTGCAGTATTTTTTGGCTCTAATCTTATCTCCTGGAGGGCCA
GAAAACAAACCACAGTGTCAAGATCAAGTACAGAAGCTAAGTACAAATCTTTAGCGAATGCCACTACTGGAATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACAACGTACATCTTGGTTATGGTGTGACAATTTGGGAGCAGCCTA
CCTTTCCGCTAATCCGTTTTTTTATGGTAGAACCAAACATATTGAAATTGACTTCCATTTTGTGAGAGAAAGAGTTGCAG
AGAAGAAGTTGGACATACGGTTTATTCCATCCAAGGATCAACTGGTAGACGGGTTCACCAAAGCCCTTCCAGCAAGACCG
TTTGAGGAGTTTAAGAGAAACTTAAATGTAGGGTAGTTTAGATTATGGTAGGGTGTTAGAAGATTCGGTTTAAATCACGT
TGTAATCTCAAAC-TCCCTTATCTCTATTCCCTCTCGTGATCGTTTTGTTCTC-TATCTGTACT----TCTGTATCCTAG
CGATCCGC-TTCAACTTGTATATC----ACGAACAGGGGCTCTTCCTGACGCATATAAATAAACGTCACGCGGCTCCTTA
CAAGGAGTAGGAA-------------------------------------------------------------------
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>chr5B_1
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCACACTGGACAACTGTTAAAAGAATTATAAGATAC
CTAAAGCATACTGCAAGTTTGGGTCTCCAGTTTAGACGTTCTAGTTCTACTCTTGTTAGTGCATTTTCTGATACTGACTG
GACAGGATGCAGTGATGACAGAAAATCAACTGGAGGCTTTGCAATATTTTTTGGCTCTAATCTTATCTCCTGGAGTGCCA
GAAAACAAGCCACGGTGTCGAGATCAAGTACAGAAGCTGAGTACAAATCCTTAGAAAATGCCACAACTGAGATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACATCGTACATCTTGTTTATGGTGTGACAATTTGGGAGCAACCTA
TCTTTCTGCTAATCTGGTTTTTCATGGTAGAACCAAACATATTGAAATTGACTTTCATTTTGTGAGAGAACGGGTTGCAG
AGAAGAAGTTGTACATACGGTTTATTCCTTCCAAAGATCAAGTGGCAGACGGGTTCACCAAAGCCCTTCCAGCAAGGCCG
TTCGAGGAGTTCAAGAGAAACTTAAATATAGGGTAGTATTGATTAAGGGAGGGTGTTAGAAGATTCAGTTTAAACCA---
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>chr3B_1
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCACACTGGACAACTGTTAAAAGAATTATAAGATAC
CTAAAGCATACTGCAAGTTTGGGTCTCCAGTTCAGACGTTCTAGTTCTACTCTTGTTAGTGCATTTTCTGATGCTGACTG
GACAGGATGCAGTGATGACAGAAAATCAACTGTAGGCTTTGCAATATTTTTTGGCTCTAATCTTATCTCCTGGAGTGCCA
GAAAACAAGCCACGGTGTCGAGATCAAGTATAGAAGCTGAGTACAAATCCTTAGAAAATGCCACAGCTGAGATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACATCGTACATCTTGTTTATGGTGTGACAATTTGGGAGCAACCTA
TCTTTGTGCTAATCCGGTTTTTCATGGTAGAACCAAACACATTGAAATTAACTTTCATTTTGTGAGAGAACGGGTTGCAG
AGAAGAAGTTGGACATACGGTTTATTCCTTCCAAAGATCAAGTGGCAGACGGGTTCACCAAAGCTCTTCCAGCAAGGCCG
TTCGAGGAGTTCAAGAGAAACTTAAATATAGGGTAGTATTGATTAAGGGAGGGTGTTAGAAGATTCAGTTTAAACCA---
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>chr3B_1
TTGCAGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACTACTGCACACTGGACAACTGTTAAAAGAATTATAAGATAC
CTAAAGCATACTGCAAGTTTGGGTCTCCAGTTCAGACGTTCTAGTTCTACTCTTGTTAGTGCATTTTCTGATGCTGACTG
GACAGGATGCAGTGATGATAGAAAATCAACTGTAGGCTTTGCAATATTTTTTGGCTCTAATCTTATCTCCTGGAGTGCCA
GAAAACAAGCCACGGTGTCGAGATCAAGTATAGAAGCTGAGTACAAATCCTTAGAAAATGCCACAGCTGAGATTATTTGG
TTGGAATCACTTCTTCATGAGCTAGGAATTAAGCAACATCGTACATCTTGTTTATGGTGTGACAATTTGGGAGCAACCTA
TCTTTGTGCTAATCCGGTTTTTCATGGTAGAACCAAACACATTGAAATTAACTTTCATTTTGTGAGAGAACGGGTTGCAG
AGAAGAAGTTGGACATACGGTTTATTCCTTCCAAAGATCAAGTGGCAGACGGGTTCACCAAAGCTCTTCCAGCAAGGCCG
TTCGAGGAGTTCAAGAGAAACTTAAATATAGGGTAGTATTGATTAAGGGAGGGTGTTAGAAGATTCAGTTTAAACCA---
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>chr1D_1
TTGCTGTTAACAAGGTTTGTCAGTATTTGCATGCACCTACCACTGCACACCGGACAGCTGTTAAAAGGATTGTAAGATAC
ATCAAGCATACTGCAAGTTTGGGTCTTCAGTTTAAACGCTCTAATTCCACTCTTGTTAGTGCTTTCTCTGATGCTGATTG
GGCAGGATGTAGTGATGACAGAAAATCAACTGAAGGATTTGCAGTATTTTTTGGATCTAATCTTATTTCCTAGAGTGCCA
GAAAACAGGCTACAGTCTCAAGATCAAGTACAGAAGCTGAGTACAAATCTTTAGCAAATGCTACTGCTGAAATTATTTGG
TTGGAGTCATTACTTCATGAGTTAGGAATTAAGCAACATCGTGCATCTTGTCTGTGGTGTGACAACTTGGGAGCAACCTA
TTTTTCTGCTAATCCAGTCTTTCATGGTAGAACCAAACACATTGAAATTGATTTTCACTTTGTGCGAGAAAGAGTTGCAG
AGAAGAAGTTGGACATACGATTTATTCCTTCTAAGGATCAAGTGGCAGACGGTTTTATTAAAGCATTGCCAGTCAAGCCA
TTTGAAGAACTCAAGAGAAATTTGAATATAGGATAGTTGAGATTAAGGGAGGGTGTTAGATGATATGATTTAAACTTG-A
TGTAATCTCAACCATCTCTTATCTCTATTCCCTCTTGTAGCTTTCCTGATCTCTTCTTTCCTGTACGAGTTGTATCCTAG
CGATCAACTCTTGCCTTGTACGCC----ACGAACAGGGGC-TTTCCTGTCGCACATAAATATACACCACGCGGCTCCTCA
CGAGGAGTAGGAA-------------------------------------------------------------------
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>chr4A_1
TTGCTGTTAACAAGGTTTGTCAGTATTTACATGCACCTAATACTGCACACTGGACAACTGTTAAAAGGATTGTGAGATAC
ATAAAGTATACTGTAAGTTTGGGTCTTCAGTTTAGACGCTCCAGTTCTACTCTTGTCAGTGCTTTTTCTGATGCTGACTG
GGCAGGATGTAGTGATGATAGGAAATCAACTAGAGGTTTTGCAGTATTTTTTGGATCTAATCTCAGTTCCTGGAGAGCCG
GAAAACAGGCTACAGTATCAAGGTCAAGTACAGAAGTTGAGTACAAATCTTTAGCAAATGCTACTGCTGAAATTATCTGA
-TGGAGTCATTACTTCATGAGTTAGGAATTAAACAACATCGTGCATCTTGCTTATGGTGTGATAATTTGGGAGCAACCTA
TATTTTTGATAATCCAGTCTTTCATGGTAGAACCAAACATATTGAAATTGATTTTCACTTTGTTAGAGAAAGAGTTGCAG
AGAAGAAGCTGGACATACGGTTTATTCCTTCCAAGGATCAAGTGGCAGATGGTTTCACTAAAGCTTTGCCAGTCAAGCCA
TTTGAAGAATTCAAGACAAATTTGAATGTAGGATAGTTGAGATTAAGGGAGGGTGTTAGATGATACGGTTTAAACCTA-T
TGTAATCTCAACTGTCTCCTATCTCTATTCCCTCTCGTAACTATCTCGTTCTC-TCTTCTCTGTACGAGCTGTATCCTAG
CGACCAGC-CTTGCCTTGTACGCC----ACGAATAGGGGCTTTTCCTGTCGCACATAAATATACATCACGCGGCTCCTTA
CGAGGAGTAGGAA-------------------------------------------------------------------
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>chr4A_1
TTGCTGTTAACAAGGTTTGTCAGTATTTACATGCACCTAATACTGCACACTGGACAACTGTTAAAAGGATTGTGAGATAC
ATAAAGTATACTGTAAGTTTGGGTCTTCAGTTTAGACGCTCCAGTTCTACTCTTGTCAGTGCTTTTTCTGATGCTGACTG
GGCAGGATGTAGTGATGATAGGAAATCAACTAGAGGTTTTGCAGTATTTTTTGGATCTAATCTCAGTTCCTGGAGAGCCG
GAAAACAGGCTACAGTATCAAGGTCAAGTACAGAAGTTGAGTACAAATCTTTAGCAAATGCTACTGCTGAAATTATCTGA
-TGGAGTCATTACTTCATGAGTTAGGAATTAAACAACATCGTGCATCTTGCTTATGGTGTGATAATCTGGGAGCAACCTA
TATTTTTGATAATCCAGTCTTTCATGGTAGAACCAAACATATTGAAATTGATTTTCACTTTGTGAGAGAAAGAGTTGCAG
AGAAGAAGCTGGACATACGGTTTATTCCTTCCAAGGATCAAGTGGCAGATGGTTTCACTAAAGCTTTGCCAGTCAAGCCA
TTTGAAGAATTCAAGAGAAATTTGAATGTAGGATAGTTGAGATTAAGGGAGGGTGTTAGATGATACGGTTTAAACCTA-T
TGTAATCTCAACTGTCTCCTATCACTATTCCCTCTCGTAACTATCTCGTTCTC-TCTTCTCTGTACGAGCTGTATCCTAG
CGACCAGC-CTTGCCTTGTACGCC----ATGAATAGGGGCTTTTCCTGTCGCACATAAATATACATCACGCGGCTCCTTA
CGAGGAGTAGGAA-------------------------------------------------------------------
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>chr4A_1
TTGCTGTCAACAAGGTTTGTCAGTATTTACATGCACCTAATACTGCACACTGGACAACTGTTAAAAGGATTGTGAGATAC
ATAAAGTATACTGTAAGTTTGGGTCTTTAGTTTAGACGCTCCAGTCCTACTCTTGTTAGTGCTTTTTCTGATGCTGATTG
GGCAGGATGTAGTGATGATAGGAAATCAACTAGAGGTTTTGCAGTATTTTTTGGATCTAATCTCATTTCCTGGAGAGCCA
GAAAACAGGCTACAGTATCAAGGTCAAGTACAGAAGTTGAGTACAAATCTTTAGCAAATGCTACTGTTGAAATTATCTGA
-TGGAGTCATTACTTCATGAGTTAGGAATTAAACAACTTCGTGCATCTTGCTTATGGTGTGATAATTTGGGAGCAACCTA
TATTTTTGATAATCCAGTCTTTCATGGTAGAACCAAACATATTGAAATTGATTTTTACTTTGTGAGAGAAAGAGTTGCAG
AGAAGAAGCTGGACATACAGTTTATTCCTTCCAAGGATCAAGTGGCAGATGGTTTCACTAAAGCTTTGCCAGTCAAGCCA
TTTGAAGAATTCAAGAGAAATTTGAATGTAGGATAGTTGAGATTAAGGGAGGGTGTTAGATGATACGGTTTAAACCTA-T
TGTAATCTCAACTGTCTCCTATCTCTATTCCCTCTCGTAACTATCTCGTTCTC-TCTTCTCTGTACGAGCTGCATCCTAG
CGACCAGC-CTTGCCTTGTACGCC----ACGAATAGGGGCTTTTCCTGTCACACATAAATATACATCACGCGGCTCCTTA
CGAGGAGTAGGAA-------------------------------------------------------------------
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>chr4B_923
AGGAAAAGAG----------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AAGGAGCGGAACGAGGCTCG
GACAGAGAAGAGACCAAACCCTAGCCCCCGATCCATCGATCGATCGCCGCATCCCACCTCATGGCAATGGCACTGCGTAA
CCTTGTGACCAGGATGGGGACCCCGGCCGCCGCCGCTCTCCGGCCGCCGTCGGTATCCCGCGGGGCGCAGGCGGCGCGCT
CTCGGCCCTTCTCCCGTCAGGTTCGTTCCCCGCTCCCTGTGCCCGCTCGGAGAATTCGCATCGCGTATGTGTCGATATGC
TCCTCCAGTCAATCCGGATCGAGGTCTCTTGATTTTCGCGGCGCTCCTCGCCTGCCGCGTAAAAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATGTGGAAACTTTTCTGAAACATACGAAAACAGAAGCATAATAAAGAAAACACGTTCGCTTTATAAATG
ATGCAGATCGGGATTGGGTCAGATTTATTTATCCTGCAGGTTAGGATAATATACTCCTTGAGAAAATGATTTAAT---AT
AAGATTTTGATTGATATATGGTGTGCTCCTTGAATGACTGCAGTCAATAGTTAATGCTGTTGGAAATTCTAATTAATAGA
TTCGATGATGAATTACTATGCAACACATGATATCTACAAGTCATAAATCTGTAAACTTGAATAAACAGAAGAACATAACG
CATTGAAAATTACCCTCAGGTAGCACAGATTATCAGTGAACACCAGATTACGTAAGAATCGTCACACATCA----TTTTT
TTTGTCCTTGCAAAAAGGAGCTAAAGGCTACCGATGAACAGTACACCCGCTGTACACTATATCATCCTTGAGTGCAAAAA
GTAGGTGTTTCAAAACAAGGGAGGGAGGGAGAATATTTCCAACAGAAAAACAGGCATGTGCTCTCTCTTGTATTGTCCTT
TTAACATGCATCCATATCTTTACGAGTGGCATCTTTAGAACTGAGTGGCAAGTCATGTTAGACCATGTTGTAGTTGATGT
TGGTTCTTACTCGCTTGAATGCCTTTCTGAAGCAGTGAAGCATCTAGGTTAGTTTGTGAGATGAATGGGTACTTGGATAG
GCTGACAAAGCTGCTATTAAAGATGTCAGAAAAGGTTAAATGTTGATTAATCCCCTTCTTCTGTCCACTGAGATACCATA
CCATTTGCTGTGCATTGTTGCAAAACAGTACCAAATCAGCAATACATAGGAAGGCAAATACTACTTGAGC----------
---------------------------TGGCATAGTATGGTTAATGATAAAAGCATCTTGGTAGTTTTTCAGAAAAATGG
GTACTTGAATAGAGTCAATAGACTGACAAAGCTGCAATTATATAAAGATGTGAGATGCGGTCAAGTGGTGATCAGTGCAT
TTTTTTTTCTACCGACTTGGAAGCCTTCTGCATGATTGCAAATTCCAACACAACTGCGCCAATTCATACAATACATTGGA
TCATACACAAGGGATAAAGAATAGAATTAAAACAGATACAGGTTAAACTAAGTGTATTAGGTATAACAAGCATTTCATTC
TTGTAGAATAAATAATTGGATTTTGATAAAGTTATTTTTGAAGGGAAAGAAGGTACTACCTTGGAGAATGTTTCTGCATC
CTCCATTGGTTTTAGCATACTACTGTTGTTGATGTACTTGCGTGATATAAGCAGATTCAAGATAACATTATTCAATGATA
TATTTCGTGGGACTTGAGCAAATTCAAGACGACATTGCTTGCAACAATTTGTCATCATTTACACTGCACGTTGACACCCG
AGCTTATATCGTGTTATTACTGAATTGTAGGTTGAACATGAGGATATTTCCAAGATACGTGCCAAAAAGAAGTATGAGTT
CAGCCTGTTCCTCCTTGAACAGTCAGAAAAACAGCTGGAGTCTGCGAAGTATGCGACCATAATTTATTCGTCAGATGCTT
TTGGCTACAATTAGTATTAGATGATTTGAACTGAGACCCTAATGCTATGGTTTCTGCACTCTTTTTGTTGAAGGGCCTGG
ACTCAGAGGTTTCAAAGGGCAGACAAGTACCTGGGTTGGACTCTCAAGGTGGTCATGCCTGCTTCTCTTGTGGCTGCGAT
AGCAGGGTCCAAGTAGGCGATCAAATGTCCATTC----------------------------------------------
-----------------ACTTTGTCTATAGCATGTTATGTAAGTCTCGGTTTGCGGCGGTTCGAATGTGATCACTATGAT
GATGATGATAACATTACCTGGTGAACGATGGGTCGGGCAGTTTTGTTAATGCAGCAGAACATATTATTGTCCTGAAAATG
GTGAATCATATGAGACTTTGGTTAAAATCAGATTAGACAGACCCTCTTGTCTTGTGCACATGACATGGTCTATTGAAATT
AGACCTTGTACGCATGACACGTGCTGCTTCGAATCATCTCAAAACATCAGTCTCACAAACATTCGCTCCAACGCCCCTCT
AGCGGTTGACTGGCGTTGCTTCCAAATCTATTATTTTTCCTAAATGACCCTTTTAAGAACTTAAGCACCTCACTGCCCCC
CTGAAAAACATATTCCAACGTCTGGCGTCTCCTGAAAAACTTTTTTTTAGGTGTAGTCCCCCTGATAACATTAGATAACA
AGAGTTCTGGGATACACATAAGCCATCAGGCGGGTCTAAGAGCCAAATATATCGACCAATATTACTACGAAGAGATGAAA
AACTTTTTGTGAAGCCAGAGGGAGAACTGCTTTTTTTTAGACAACCAGCGGGAGAACTACCGATAGGCCAGGTATGGGCG
ACCTCACCCAGGCCTCCACGGGCCAGGCCCATCCACGTGGCGGATGCAGTTTAAATTTGTTTTGTTATTTCTTTTCATTT
TCCTTTTTCTCCCTTATATATTTCATTAAATGTTCGATATTATATATATATATCAAAAAATTATTAATTTACCGATTTTT
TAAAACCGGATAAAAATATTAAAAAGTGCAAAAAAATTCATGTGACTA-AGACAAATGTTCGTACATTTTAGAACAATCA
TTTAAATAG-AAAAATACATACACATTTTTACATAATTTAAATTCTTTGCGCATTAAAATAAATGTTGATGTAATTCAAA
GTGCTCACGCATTTTAAAACGTGTGATTTCTAAAATGATTCACAAAATTTAGATTTTTTTAAGCGCA--TTAAAAAATGT
GCATGACAT
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S---------------------S------------------------------------------S--
---------------------------------------------------------------S----------------
-------------------------------------S-S---S--S---------------------S-----------
-------------------------------------------------------------------------S------
------------------------------S-------------------------------------------------
------S-----------------------S---------S----------SS---------------------------
---------------S------S-----------------------------S---------------S----------S
------------------------SSSS----------------------------------------S-----------
S-------S-S--SSS--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S-
--S------------------S-------------------------------S-----------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--S---------------------------------S----------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS--------------------S-------------------------SS-----S---S-----------
--------------------------------------S----------------S----------S--------SSS--
-------S--S---------------------------------------------------------------------
------S-----------------------------------------------------------------------S-
---------------------------------------------------------S-------------SSSS-----
----------------------------------S-------------------S-------------------------
-----------------------------------------S--S----------S--------------S---------
-----S-------S------------S------------------------S---S----------------S-------
-S------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
------------S---------------------------------------------------------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------S---------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------S---S----------------------------------S---S--------------------------
---------------------------S----------------------------------S--------S--S---S-
---SS------------------------------S-------------------------------S----S-------
-------------------------------S------------S-S-----------------------------S---
-----------------S--------------------S-----------------------S-----------------
---S----------------S-----------------------------------------------------------
------------------------------------------------------------------S--------S----
S---------------------------------------------------------------------------S---
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------------------------------S--SS------------S-------------
-------------------------S----S-S-----------S--------------------S-------------S
------------------S----------------------S--------------------------------------
---SSSSS--SSS-SSSSS-SS-SSSS-SSSSSSS-SSSSS-SSSSSSSSSSSSSS-SSSSSSSSS-SSS-SSSSSS-S-
---SSSSSSSSSSSS-S-SSSSSSSS-S-SSSSSSSSSS-S-S-SS-SSSS-S---SSS--SSSS--S--S-SSS--SSS
-SSS-SSSSSS-SS--S-SSSSSSS---SSSSSSSSSS--SSSSSSSS-SSSSSS-SSSSSSS-S-SS--SS-SSS--S-
SSSS--SSSSSSSSS-SSSSSSSS-SSSSSS-SS----------------------------------------------
------------------------------------------------S----------S--------------------
SS----------------S------S--S----S-S----------S-----S-S---------------------S---
--------S--------------S--S----S--------SS-S-----S-----S---------------S-----S-S
----------------S------------S--SSSSS-SSSSSSSSSSS---S--------S------S-----S-----
---------S---------S-------S-S------------------------S-------------------------
---S----S--------------------S-----------------------------SS-SSSSSSS--S--------
-----S---
>forward_913
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-------------GAGGTGTGGAAAGGCCTTGA-----------------------------------------------
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>reverse_2952
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------CTCAGCACC
CTCTGTTGGTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1271
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------CTGCCGCGTAAAATACACCG---------
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---------
>reverse_3204
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---TCTGTTCCTCCTTGAACGGTC--------------------------------------------------------
--------------------------------------------------------------------------------
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---------
>forward_1344
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAGGCCATGTTCGTCTCCTG----------------
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---------
>reverse_3347
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------------------------------------------------------------------CTTGAAGGGTCTGG
GCTCAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1370
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AATGCCTCTT
GCCACCCTTT----------------------------------------------------------------------
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---------
>reverse_3361
--------------------------------------------------------------------------------
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GCTCAGAGGTTTCAAAGGGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1371
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATGCCTCTT
GCCACCCTTTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------
>reverse_3437
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TGAT
AGCAGGGTCCAAGTAGG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1375
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTCTT
GCCACCCTTTTCCCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------
>reverse_3475
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------GCTGTTTTGTTTATTGATGATGGCA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
