>input_sequence_33531
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-------------------------------------------------------CACGCGCGT---CGCCGCCATCGCC
GTCCCCGATCTCCGCGTCGCGAGATCACGTCCCTGCTGTCTCCACCCCGTCCGCAGTCTTCGGTCATTGGGG-TTTGAGG
TATGAGCTTGGTTTCATCCAGTGATTAGTGTTAAGCCCCGCTGTCCTCCAGAATTTCTGGGTGCGCCGGTGCACACCCGG
CAGATCCGCCCCTGCTCTTACGATTGGTTTGG-AGACCTGTCCATGTCTTGTAGCTATGATTCTGCCCGTAGAAAAGGAG
CCCTATT--TAGACTAATCAAAGTCGCTCTTTTGCCGTGTCTTTATAGCTATATAATTGAAGCAAATGAGTACAGTACCT
TTTGTTTCTTTAGGTTGTTGATTACTTTTAGATTTGGACCTTTAGTTCC--ATATCATCCTCGTATCCGTGCAAAAATAT
GTCACTTCATAATGTTCGTAGCTTCAACTTAA-TGAGAATTAAGGAGATGGTTATAGAGGTGCTTCCCATATCAATGCAG
CTTATGCTTTATAAATCATCTGTTTGTTGTAGACTTGTAGATCATCTTTTTGAACTAGTATGATAGCGTCATGTTTATGT
TTCAAAAGCCTACCCGTCTGCTCAAAGAATGAAGAATTCGGTTTGCATTTACCTGTTATGTGTTTCATCTTGGAATATAC
AGCTCAATAGTTGCTTATGACGTTT------------CCTTTGCAATAATACTGAAGTCTTTGGTCT-TTTTTTCTCTCT
GAGAAAGTCCTGATTGTTTGTGTTCATGGGCATATCCATTGGCATTCTGGTAGCTGGTTTGAATTATTCTGCACCCTAAC
ATTGTATGTTGGATCAGTAAAATATCTAGATGATAGTACTGCAGCCCTGCCATTGCATACATGCAGATTAGATGTG----
---------TTAGTTCCTTTTTTATTTTTTGCCTCCCATGTTTTTTGTGCTAGATTTGCTCTTAGAAATATGTGAGCCCT
GAACATGGTTCTTTTTGGTTTTCTGTTACGGGCCAACTCTTTTCCCATGAATGATTAGATGCAACAGGGACTTATACTAC
TCGCCATAATCCATGGTGTAGCATGATACCTGTTATGTGATACTCCCTCCATTCCAAAATATTGTGCACCCGCGCTTCCC
GAGGTCCAACTTTGACCATAAATTTAACCAACGAGACCAACTGCGGCGGGAGAAAAAATTATATAATTGAAAACTTCTTT
TGAATACGAATTCACTGGTATAACTTTTGCTCCCGCCGCAGTTGGTCTTGTTGGTTAAATTCATGGTCAAAGTTGAAGCA
CAGGAATAGAGGAAGCACTATATTTTGGAATGGAGGGAGTAACATGTTAGCCTTTTTCTTTTAG-----TATAAATTAAG
CTTGTAACTCACGTTGTATGTTTGATTCCTCATTAGTTAGTACTGAAGCAAAATATAGTGTTGTTATAAGTGGTCCTTTT
CTATGTAGCGAGATTATGACTGTTTAAAATGCCTGGAAATTTTGTTGGGGTTGATTGTTTCTTACTTTCTTGGTGCCGCG
TTAATAGAGATATTTCTACTTTCTAATGAAACTGTGAGTGTTACTTTGTAGCACTAGTCACTCAAGGTATTGACCACGAT
GTGAGTTGAAACAGATAATGATTTCTTATTTCACATTTTCTAACTATTGTTCATTCCATTGCAGTTACTGGCAGTTTCAG
CTAGACAATAATCATGAGACTTGCTTGTCTTGTATGCCATGGCATGAACAGCCCCTCACACTCTCTTAGAAGCTACTCGG
TGTCGAGTTCAGAGGAGGACAACCGATGTGGAGCTGTTGTTTCCTGCTTAACTCGGAGAGTAACGCCGGCTGGATCTGCT
AGTGTTGGGACATCAAAGGTGACCCCCTTTCCATCCATAGCGGCTGGTCAAGGCACCGAGGGCACTCCTCGCCTTCAACG
AAGCCGTGCTGTGTCCAGGGACCTTGTCAGAGACTGGAACTTTGATGAAGCCGTCGTTGCAAACTAGATTAGGCGTCAGC
TGTTCCCAATTGGATTCTGCACTCTTACTTATTCAGGAGGAGACTCCATCAATTTGGTGTACATTTTTTTGCTAGTATAC
TCTATGTCCATCAGTACTTTTCAGTTGGGACTC---TATCGGTCTATGCTCA------------CTTCTCATGAGCAGTT
TGTGGCTTGGTAACATATGAAGGCCAACCTGTGTAGATAGAATAAATTTTAGGGTATTTTTCCTATTTCTAAAAGTGGAT
ATGCTATCCTGTACTTCCTGTATATTATGAAATATCTAATTTCCTATAATTGCTGGGAAAATGGCCACTGGGATTTTCAT
GCGTTGCAGTTGGCATTTCTTTGCCACATGATAACGCTGCAGTGGTCAATTGTATCAGCTATTTCTCTTGTGCACAAAAC
TTGCGTAAAAATTCATTAG-------------------------------------------------------------
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>chr1B_1_TraesCS1B01G280500
GTAACACTAAGGGCGAGGTAACATCAAGTTTCTATTTGAGTGTGTTTGTAAGGGCATGTGATACTTAATATACGACCTTC
GCAACAACAAAAGAACCTTTCGAAAACCCCT----TTTTGAGTTAAAGAGGCTCTTATAGCCTTACAAATGACCCAC---
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------------------------------------CATTGTTTTGGGAATAGGTCATCCTACCCAAATTCCATCGTCTA
CTTGGCAAATTGGCAAAATAATGTCAGTACATTA-AAAAACCTTGGTCAACAAGTCAGCGGAGAGGATAAGCTAGAAGGA
AATGTCAAGAGAAAAAAAACATTAAGTACATTAAGTAGAGGGATGAGGGAGCTAGTCCGCCATTTTACCATTAAAAACCT
GCCTCCCTGACATGTTTAAATTTAGGAG----------------------------------------------------
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---------------------------------------------------------TATAAGCTAAGAGATCATAAATT
TCCACCGGCACCTGTTATGATCATTTGGGCCAACACTAAATTTTTTTCCTGCTAAAAGTTTATTTTGATTTTTGTCGAAA
TATTTTTAATAATAATAAATAAATAAAACCTTG------------TCACGGTCGCACCGAAACTCTTATCTCCTTTTCCC
CGTACCTTTCTTGCATCTTCCTCCTCGAGTCCCTCCTGACCTCTGCCAATCCAACCCAGCACGGCCTCTCCATCGCCTGC
----------CCGCCGTGCCGTAGCAGCCTAGCATCCCCGCCGACGCTTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCGCGT---CGCCGCCATCGCC
GTCCCCGATCTCCGCGTCGCGAGATCACGTCCCTGCTGTCTCCACCCCGTCCGCAGTCTTCGGTCATTGGGG-TTTGAGG
TATGAGCTTGGTTTCATCCAGTGATTAGTGTTAAGCCCCGCTGTCCTCCAGAATTTCTGGGTGCGCCGGTGCACACCCGG
CAGATCCGCCCCTGCTCTTACGATTGGTTTGG-AGACCTGTCCATGTCTTGTAGCTATGATTCTGCCCGTAGAAAAGGAG
CCCTATT--TAGACTAATCAAAGTCGCTCTTTTGCCGTGTCTTTATAGCTATATAATTGAAGCAAATGAGTACAGTACCT
TTTGTTTCTTTAGGTTGTTGATTACTTTTAGATTTGGACCTTTAGTTCC--ATATCATCCTCGTATCCGTGCAAAAATAT
GTCACTTCATAATGTTCGTAGCTTCAACTTAA-TGAGAATTAAGGAGATGGTTATAGAGGTGCTTCCCATATCAATGCAG
CTTATGCTTTATAAATCATCTGTTTGTTGTAGACTTGTAGATCATCTTTTTGAACTAGTATGATAGCGTCATGTTTATGT
TTCAAAAGCCTACCCGTCTGCTCAAAGAATGAAGAATTCGGTTTGCATTTACCTGTTATGTGTTTCATCTTGGAATATAC
AGCTCAATAGTTGCTTATGACGTTT------------CCTTTGCAATAATACTGAAGTCTTTGGTCT-TTTTTTCTCTCT
GAGAAAGTCCTGATTGTTTGTGTTCATGGGCATATCCATTGGCATTCTGGTAGCTGGTTTGAATTATTCTGCACCCTAAC
ATTGTATGTTGGATCAGTAAAATATCTAGATGATAGTACTGCAGCCCTGCCATTGCATACATGCAGATTAGATGTG----
---------TTAGTTCCTTTTTTATTTTTTGCCTCCCATGTTTTTTGTGCTAGATTTGCTCTTAGAAATATGTGAGCCCT
GAACATGGTTCTTTTTGGTTTTCTGTTACGGGCCAACTCTTTTCCCATGAATGATTAGATGCAACAGGGACTTATACTAC
TCGCCATAATCCATGGTGTAGCATGATACCTGTTATGTGATACTCCCTCCATTCCAAAATATTGTGCACCCGCGCTTCCC
GAGGTCCAACTTTGACCATAAATTTAACCAACGAGACCAACTGCGGCGGGAGAAAAAATTATATAATTGAAAACTTCTTT
TGAATACGAATTCACTGGTATAACTTTTGCTCCCGCCGCAGTTGGTCTTGTTGGTTAAATTCATGGTCAAAGTTGAAGCA
CAGGAATAGAGGAAGCACTATATTTTGGAATGGAGGGAGTAACATGTTAGCCTTTTTCTTTTAG-----TATAAATTAAG
CTTGTAACTCACGTTGTATGTTTGATTCCTCATTAGTTAGTACTGAAGCAAAATATAGTGTTGTTATAAGTGGTCCTTTT
CTATGTAGCGAGATTATGACTGTTTAAAATGCCTGGAAATTTTGTTGGGGTTGATTGTTTCTTACTTTCTTGGTGCCGCG
TTAATAGAGATATTTCTACTTTCTAATGAAACTGTGAGTGTTACTTTGTAGCACTAGTCACTCAAGGTATTGACCACGAT
GTGAGTTGAAACAGATAATGATTTCTTATTTCACATTTTCTAACTATTGTTCATTCCATTGCAGTTACTGGCAGTTTCAG
CTAGACAATAATCATGAGACTTGCTTGTCTTGTATGCCATGGCATGAACAGCCCCTCACACTCTCTTAGAAGCTACTCGG
TGTCGAGTTCAGAGGAGGACAACCGATGTGGAGCTGTTGTTTCCTGCTTAACTCGGAGAGTAACGCCGGCTGGATCTGCT
AGTGTTGGGACATCAAAGGTGACCCCCTTTCCATCCATAGCGGCTGGTCAAGGCACCGAGGGCACTCCTCGCCTTCAACG
AAGCCGTGCTGTGTCCAGGGACCTTGTCAGAGACTGGAACTTTGATGAAGCCGTCGTTGCAAACTAGATTAGGCGTCAGC
TGTTCCCAATTGGATTCTGCACTCTTACTTATTCAGGAGGAGACTCCATCAATTTGGTGTACATTTTTTTGCTAGTATAC
TCTATGTCCATCAGTACTTTTCAGTTGGGACTC---TATCGGTCTATGCTCA------------CTTCTCATGAGCAGTT
TGTGGCTTGGTAACATATGAAGGCCAACCTGTGTAGATAGAATAAATTTTAGGGTATTTTTCCTATTTCTAAAAGTGGAT
ATGCTATCCTGTACTTCCTGTATATTATGAAATATCTAATTTCCTATAATTGCTGGGAAAATGGCCACTGGGATTTTCAT
GCGTTGCAGTTGGCATTTCTTTGCCACATGATAACGCTGCAGTGGTCAATTGTATCAGCTATTTCTCTTGTGCACAAAAC
TTGCGTAAAAATTCATTAGCATGCTATATTTTTGTTGATAAAATGCTGAAAAGGCAGGATGTTAAGTACTTCTC-CATAA
ATGATTTACAAGGCCTTTTCCACCCAAATCAGTGAACATCAATTATTTCCCATCTTAGGTTGTTGAAACAACATATAATT
TTCATTTCTGACCTGCAGGTAAAGACAATTACATTACACCAAATGAAAAGTTTGAAACAAAGCAAATCACTCGCAAGTTT
GCAACCAAAAAAATGGTGAACTATCTGTTGTACAACAATGGCATGC-TTCCTATTTTCCCAATGGGCATGCTTTTAATAT
AATGCTGGTGAAAATGCCTTCAGCACGCTATTTTC-ATTGAACCGCGGCAGGGGCCTTGAGCAGAGCCATTGCGTCTTTT
ATCTTCTCCATCGCAGATTGTAGCGTTGACAGTGCAGCAGCATAGGAGATACGAACACCCTTGTCATCTCCAAATGCATC
TCCGGGGACAAGCGCGACCTGTGATGCAAGAGAAAACACCTTAGATAACCACCTACCCATTGATCTTGTTTATGTCGA-T
GACACACTCGAAATGGCTGTAACCGTCACCTGTGCTTTCTCTAGCAGGAACATGCAGAGGGTCTCAGAATCCTTGATGGT
GCCAAAACCCTCTACCTCAGACCCGTAGTAGGAGCTGAAGTCGATGAACAAATAGAAAGCACCCTGAAAATTGCGAAGCT
TAGCTACCTTCCTGATATAGATATGTCACATAGTCGCAACTAGCATCGTAGTCGAGAGGCTTACCTGAGGTTCTGATATT
TTTACTCCTGGCAGTTCCCTGAAACTACTTACAAGGTAATCCCGGCGCTCCTGGAATGCTTTGACCATGGTTGCAACTGC
TTCACCGCCGGCATAACCAAGGTTCAAGGCTGCAAGCCCTGCCTTCTGTGATATACTACTGGCACCAGATGTGTACTGCG
TAGTAAAAAACACACTATTATCAGGACAAATAAAAAAAAC-TCAAGACTGGAGATATGTGAGCC
>chr1D_29
----------------------------TTTCTATTTGAGTGTGTTTGTAAGGGCATGTGATACTTAATATACCACCTTC
GCAACAACAAAATCTGTAAGAGTCTTTTGAAAATCTTTTGAGTTAAAGAGGCTCTTATAGCCTCATCCCTTGGTGGCTAG
GGCAAACTCTTCCCAACAGACTTCGTCGGCGAGCCTGTGGATTCGCCTCCCCTCTGCCTGCCGCTCCGGCGGCCGGTGGC
GGGGAGGGGAATCCTGGTGCCTCCGCTTCAGTTAGTAGTTTAGGTTAGGGGGTTTTAGTCCTCGCAGGTGCGGCGCTCGG
GTGGATGGCGGCCCTTCTTCTCCAAGTTTGTGTTCCGGGCTTCGGTCCTCCTTGAGTTCGTCCATCTGGACGTAGTCGTC
GAAGCTTCGGCATAGATTCCTGCCGTCTTCTTGTGGCGAGATTTGGTGTCAGATGCTTCAGATCTGTTCAAGGGTTCAAC
GACGACGACTGCGGCTTCAGGGCGCTGGTCCTTAGGGGCACGTGCATGAAGACTTCCCGGCTGTCATCGACAAGGTCAAG
CCGGCTCCGATAGGGGAGCGGCGACAGCGGCGCGTCGGCGGCTCGTTCTGGCAGCTGTAGTGATCGTTCGGTGGTCTTGG
TATCTTGATGTAATTTTATTATGTTTGAGGTGCTTTGTACTTCCGGTAAACTTTGATAATAGATTTTAATTATTTTTGCA
AAAAAAAAGGCTCTTATAGCCTTACAAGGGACCCAGCATTGTTATGGGGATAGGTAATCCTACCCGAATTCCATCGTCTA
CTTGGCAAATTGGCAAAGTAATGTCAGTACATTATAAAAACCATGATCAACAAGTCAGCAGAGAGGAT-AGCTAGAAGGA
AAAGTCAAGAGAAAGAAACCATTAG---------GTAGAGGAATGAGTGAGCTAGTCCGCCATTA-ACCATTAAGAACCT
GCCTCTCTGACATGTTTTATTTTAACTAGCAAAAATGTTCGTGCGTTGCAACGGGATAATAATAATAATAATAATAATAA
TAATAATAATATAAAAACTCCTTCTCTGTCACACTGTTAACGCCATTTATTTCCCCCGACACCCCCATCATAGTGGTTGT
TATCCTGCTTTCCCCATCAATGACGTTGGTCTTTCATCTCATCAACAGGTCTAAATATGGTCAATCTCAAAACGCAAATG
CTCGCGCGTTGCAGCGGGAAAAAACTTTGACATGGATTCAAATATAATAAGAATTGTGAAATGTTGCTCATTTTTCAAAT
CTGCTCAGTGCGCCACTTCTTCTATCCAACTCTAACAAATTTTCTATGAATACAGATAGAAGAAGGGATCGTAATCCTAA
AAACATATAGCTCACTTCATATTTCTCCTATTCCTCCTTCCTTGAGTAGCGGGTTGCAACCGGAAAAAACTTTGACGTGG
ATTCAAATTTAGTGAGAGTTTTGAAATGTTGCTCATTTTACAAATCGGCTCGGTGCCACTTCTTCTATCCAACTCTAACA
AATTTTATATGCATATAGATAGAAGAAGGGAACGTAATTCTAAAAACATATAGTTCACTTCATATTTTTCCTATTCCTCT
TTCCTCGAGTAGCGGGTATTCCTTACATTTGTAGTGATATAGTATAAAAATAATGTTATTGCCGTCATGTCCACCAGAGT
TTCAGTAAAATAACAAAAAAGTAAATTAGCCAGAATGAAGAATGGAAGGAAAAACTTGTGGAACTCACAAATTTTTGTTA
ATTCCCTCACTTCAGATCTGTTCAATTAAGTTTTCAAAAAATAGAGTTGTTCAATTAACACACTTGATTTTCTGTTTAAA
ATCAGATTAGTAACACAAAGTCTCGAGCTTAAAATTAAAATAAAATAACACAGCGCAATGATTAATTATTTTCCGCAATC
CCATTTAAGTAGGAGACATTTTTGTTTTGCGACCGTTAAATCTAGTTTTCCACATTCCTGCTTTCAAATTCGGCCATGAA
TCTCCCCCAATTCCGGCAAGCAGCGTGCAATCAGGCCATGAAGTCAAATTGCCCCACACAATCCAGCTTTAATCATAGTC
CTGAAATCTTCATTTAACTTTCATGAAGCGTGCATGTGCATCCTTCCTTCTATGTTCATCCTCTTTCTTATGATCTTGTC
CACGCTGTCACGGACAACTTTCTTAGATTTATTTTAAGTTTTAATGCCCAAGACAGCCCGGCCTCTTATAACCTTGTCCG
CTCTCACGTTAACCTTTCTTAGGCAACTTGCTGGTCATACAAGAGAATTTCTACATATATAAAAGGCTACAAATTGATCT
AAACAAACGATGTGGGACTAATCTAACATAAAATATGGATGCTCACCTGAGTTCGGTCACCCCCAGCCACGCAGCTTGCG
GCCCAGCAAAGGCCTAACACTCTATTTGGGAAGGCCCAGCGGTATAATTTTTCAAGCCCGGCGAAGCACTGCAGGTCAGC
GGTACGACTATTTCATTAACACGAACGGCGCGCCTCAAACAGCGTCATATGGTAGTTCAATTGGTCGCACTCTTGGGCAC
CGAACTGGAGGTCTTGGGTTCGATTTCGGAGGACCAGGTCTATTTGCCTGTTATTTATTTATTTTTCCAATTCGAAGGCC
AACAAGTAAAATTCTACACGAAGGGAGTTAAATCTGGAGCGCATTGAAGAAAAAAACTGAAAGCGTATTGTGATGGTGAA
CCCACGAAGTCAATCCGTGCTTTATTATTAGAAATTAGAAATTAGAAAAATAGAGAAGAGAGAGATTGATGATATGAAGG
AAGGGCAATGAAACAAGACGCCCCCACACGCGAACAGATCCCCACCTGTGGCCGCAAATCGGCGGCGAGCGGCGCGTCAG
TGCAGCTCCGCGTGCGGCACTGCATCACCGGCGGCGAGCGGCACTCCATTGCAACTCCGTCAGGCGGCGAGCGGGGCTTC
AGTGCAGCTCCGCGTGCCGCACTCAATCACCGGCGGCGAGCGGCACTCCATTGCAACTCCGTCGGCGGCGAGCGGCGCTT
CAGTGCAGCTCGCGGAGCTGCACTGCATCACCGGCGGCGAGCGGCAGTCCATTGCAACTCCGTCGGCGGCAAGCGGCGCT
TCAGTGCAGCTCCGCGAGCTGCACTGCATCGCCGGCGCCGAGCGGCGTTCGACTGCACTCCGGCCTTCGTCTTGCACTGC
AATACCGGCAGCGAGCAGCCCATGCGTGCTGCATTGCAGCACCGTCGTCGACGAGAGTCGCGTTTCAACGACGGCAGCAC
CGTCGAGTCGTTGGGCCGCAAACACCTGCAGCATCCGAGTCAACGACGAGGGCCGCGTTACCGCGTCACGACGCCGTGGT
ATGGATCTTGAGGAGCAGCAGGTGGAGTTTGGGAGCAGGCCATGGCGGACGGGGATTGGACGGGAGGGGCCATGGCGAAG
GGGATCGAGCTCTCCCTCTCGGATGCTACGGACGAGGAGACGAGGAGAGGGAAAAAGACGAGAGGAAGAACGAGTGGACG
AGCAGCCGCGTGAAAAGAGATAAGGCTCGCGGGGGAAGCGGTGGACTCGCGTGGGCAGGGGACACGTGTCGCGCGGAAGG
AGAGGTTTACGCGAGAGAGATACGTCGGTTGATTTTAATACTTTTCCATGAAGGAAATATGATCTAAGAGATCATAAATT
TCGACCAAACCCTGTTAT------------------------------------AAAGTTTATTTTTATTTTTATTGAAA
TATTTATTTATTTTTATTATAGTTTAAAGGGAAAAAAATATCTTATCACGGTCGCACCGAAACTCTTATCTCCTTTTCCC
CGTAGCTTTCTTGCATCTTCCTCCTCGAGTCCCTCCTGACCTCTGCCAATCCAACCCAGCACGGCCTCTGCACCGCCTGC
CCTACAGCTGCCGCCGTGCCGTAGCAGCCTAGCGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCCCAAGGCCTCT-----CACGCGCGTCGCCGCTGCCATCGCC
GTTCCCGATCTTGGCATCGCGAGATCGCGTTCCCGCTGTCTCCACCTCGTCCGCAGTCTCCGGTCACTGGGG-TTTGAGG
TATGAGCTTGGTTTCATCCAGTGATA---GTTAAACCTCGCTGGCCTCCAGAATTTCTGGGTGCGGCGGTGTGCACCCAG
CAGATCCGCCCCTGCTCTTACGATTGGTTTGG-AGACCTGTCCATGTCTTGCAGCTATGATTCTCCCCGA---AAAGGGG
TCCTGTTTATAGACTAATCAAAGTCGCCCTTTTGCCGTGTCTTTATAGCTATATAATTGAAGCAAATGAGTACAGTACCT
TTTGTTTCTTTAGGTTGTGGATTACTTTTAGATTTGGACCTTTGGTTCCG--TATCATCCTCGTTTCCGTGCAAAATT-C
GTCACTTCATAGTGTTTGTAGCTTCAACTTAAATGGGAATCAGAGAGAAGGTTATAGAGGTGCCTCCCATATCAATGCAG
TTTATGCTTTATAAATCATCTGTTTGTTGTAGACTTGTAGATCATCTGTTTGAGCTAGTACCGTAGCGTCATGTTTATGT
TTCAAAGCCTG-CCCGTCTGCACAGAGAATGAAGAAATCGATTTGCATTTACCTGTCCTATGTTTCATCTTGGAATATAG
AGCTCAATAGTTGCTTATGACGTTTATGACAATCCTCCCTTTGCAATAATACTGAAGTCTTTGGTGTGTTTTTTTTCTCT
GAGAAAGTGCTGATTGTT----------------------GGCATACTGGTAGCTGGGTTGAATTATTATGCACCCTAAA
ATCGTATGTTGGATCAGTAAAATGTCTAGATGATTGTTCTGCAACCCTGCCATTGCATACATGCAGATTAGATGTG----
---------T-------------ATTTTTTGCCTCCCATATTTTTTGTGCTAGATGTGATCTTAGAAATA--TGAGCCCT
GAACATGGTTCTTTTTGGTTTTCTGTTATGGGCCAACTCTTTTCCCATGAATGATTAGATGCAACAGGGACTTATACTAC
TCGCCATAATCCATGGTGTGGCATGATATTGATACCCGTTATGCGA----------------------------------
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---------------------------------------TAACATGTTAGCCTTTTTCTTTTAG-----TATAAATTAAG
CTTGTAACTCACGTTGTATGGTTTATTCCTCATTAGTTAGTACTGAAGCAATACATAGTGTTGTTATAAGTGGTCCTTTT
CTATATAGTGAGATTATGACTGTTTAAAATGCCTGTAAATTTTGTTGGGGTTGATTGTTTCTTACTTTCTTGGTGCCGCG
TTGATAGAGATATTTCTACTTCCTAATGAAACTGTGCGTGTTACTTTGTAGCACTAGTCACTCAAGGTATTGACCATGAT
GTGAGATGAAACAAATTATGATTTTTTATTTCACATTTTCTAACTATTGTTCATTCCGTTGCAGTTACTGGCAGTTTCAG
CTAGACAATAATCATGAGTCTTGCTTGTCTCGTATGCCATGGCATGAACAGCCCCTCACACTCTCTTAGAAGCTACTCGG
TGTCGAGTTCAGAGGAGGACAACCGATGCGGAGCTGTTGTTTCCTGCTTAACTCGGAGAGTAATGCCGACTGGATCTGCT
AGTGTTGGGACATCAAAGGTGACCCCCTTTCCATCCATAGCGGCTGGTCAAGGCACCGAGGGCACTCCTCGCCTTCAACG
AAGCCGTGCTGTGTCCAGGGACCTTGTCAGAGACTGGAACTTTGATGAAGCCGTCGTTGCAAACTAGATTAGGCGTCAGC
TGTTCCCAGTTGGATTCTGCACTCGTACTTGTTC---AGGAGACTCCATCAATTTGGTGTACATTTTTTTGCTAGTATAC
GCTATGTCTATCAGTACTTTTCAGTTGGGA--CTCTTATCGGTCTATGCTCAAGAGTGATGGCACTTCTCACGAGCAGTT
TGTGGCTTGGTAACATATGAAGGCCAACCTGTGTAGTTAGAATAAATTTTAGGGTATTTTTCCTATTTCTAAAAGTGGAT
ATGCTATCCTGTAATTCCTGTATATTATGAAATATCTAATTTTCTATAATTGCTGGGAAAATGGCCACTGGGATTTTCAT
GCGTTGTGGTTGTCATTTCTTTGCCACGTGATAACGCTGTAGTGGTCAATTGTATCAGCTATTTCTCTTGTGCACAAATC
TTGCGTAAAA-------------------------------------------GCAGGATGTTAAGTATGATTTACATAA
ATGATTTACAAGGCCTTTTTCATCCAAATCAGTGAACATCAATTATTTCCCGTCTTAGGTTGTCAAAGCAACATATTATT
TTCATTTCTGGCCTGCAGGTAAAGACAATTACATTACACCAAGTGAGAAGTTTGAAACAAAGCAAATTGCTCGCAAGTTT
GCAACCAGAAAAATGGTGAACTATCTGTTGTACAACAATGGCATGC-TTCCTATTTTCCCAATGGACATGCTTTTAATGT
AATTCCGGTGAAAATGCCTTCAGCACGCTATTTT-TATTGAACCGCAGCAGGGGCCTTGAGCAGAGACATTGCGTCTTTT
ATCTTCTCCATGGCAGATTGTAGCGTTGACAGTGCGGCAGCGTAGGAGATACGAACACCCTTGTCATCACCAAATGCATC
TCCGGGGACAAGCGCGACCTGTGATGCAAGAGAAAACACCTTAGCTACCCACCTACCCACTGATCTTGTTTATGTCGACT
GGCGCGCTCAAAATGGGTGTAACTGTCACCTGTGCTTTCTCTAGCAGGAACATGCAGAGGGTCTCAGAGTCCTTGATAGT
GCCAAAACCCTCTACCTCGGATCCGTAGTAGGAGCTGAAGTCGAGGAACAAATAGAAAGCACCCTGAAAATTGCGAAGCT
TAGCTACCTTCCTGATGTAGATATGTCACATAGTCGCACCTAGCGTCGCAGTCGAGAGGCTTACCTGAGGTTCTGATATT
TTTACTCCTGGCAGTTCCCTGAAACTTCTTACAAGGTAATCCCGGCGCTCCTGGAATGCTTTGACCATGGTTGAAACTGC
TTCACCGCCGGCATAACCAAGGTTCAAGGCTGCAAGCCCTGCCTTCTGCGATATACTACTGGCACCAGATGTGTACTGTG
TAGTAAACAACGCACTATTATCAGGACAGTT-AAAAAAAT-TCAAGACTGGAGATATGTGAGCC
>chr1A_539
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---------------------------------------------------------------TCTTATCTCCTTTTGCC
CGTACCTTTCTTGCATCTTCCTCCTCGAGTCCCTC-TGACCTCTGCCAATCCAACCCAGCACGGCCTCCGCATCGCCTGC
CCTACAGCCGCCGCCGCGCCATCGCAGCCTACCGTCCCGGCCGACGCTTTCAACCCCCCCACCC----------------
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----------------------------------CCACCCCAAGGCCTCT-----CACGCGCGTCGCCGT---CATCACC
GCTCCCGATCTCCGCATCGCGAGATCGCGTTCCTGCTGTCTCCACCTCGTCCGCAGTCTCCGGTCATTGAGCCTTTGAGG
TATGAGCTTGGTTTCATCCAGTGATTAGTC--AAACCCCGCCGGCCTCCAGAATTTCTGGGTGCAGCGGTGCGCACCCGG
CAGATCTGCCCCTGCTCTTACGATTGGTTTGGGAGACCTGTCCATGTCTTGCTGCTATGATTCTGCCCGTAGGAAAGGGG
TCCTGTT--TAGACTAATAAAAGTCGCCCTTTTGCCGTGTCTTTATAGCTATATAATTGAAGCAAATGAGTACGGTGCCT
TTTGTTTCTTTAGGTTGTGGATTACTTTTTGATTTGGACCTTTGGTTCCGTATATCATCCTCGTATCCGTGCAAAAGTAC
GTCACTTCATAGTGTTCGTAGCTTCAGCTTAA-TGAGAATTAGGGAGATGGTTATAGAGGTGCTTCCCATATCAATGCAG
TTTATGCTTTATAAATCATCTGTTTGTTGTAGACTTGTAGATCATCTGTTTGAG-TAGTATCGTAGCGTCATGTTTATGT
TTCAAAGCCTG-CCTGTCTGCTCAAAGAATGAAGAAATCGATTTGCATTTACCTGTTCTGTGTTTCATCTTGGAATATAC
AGCTCAATAGTTGCTTATGACGTTT------------CCTTTGCAATAATACTGAAGTCTTTGGTGT-TTTTTTCTCTCT
GAGAAAGTCCTGATTGTTTGTGTTCATGGACATATCCATTGGCATTCTGGTAGCTGGTTTGAATTATTCTGCACCCTAAC
ATTGTATGTTGGATCAGTAACATATCTAGATGATAGTACTGCAGTCCTGCCAGGGCATACATGCAGATCAGATGTGTTAG
TTCCTTTTTT-------------ATTTTTTGCCTCCCATGTTTTTTGTGCTAGATGTGCTCTCAGAAATA--TGAGCCCT
GAACATGGTTCTTTTTGGTTTTCTGTTATGGGCCAACTATCTTCCCATGAATGATTAGATGCAACAGGGACTTATACTAC
TCGCCATAATCCATGGTGTAGCATGATACCTGTTATGTGAT---------------------------------------
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----------------------------------------AACGTGTTAGCCTTTTTCTTTTAGTACAGTATAAATTAAG
CTTCTAACTAACGCTGTATGTTTGATTCCTCATTAGTTAGTACTGAAGCAATATATAGTGTTGTTATAAGTCGTCCTTTT
CTATGTAGCGAGATTATGACTGTTTAAAATGCCTGGAAATTTTGTTGGGGTTGATTGTTTCTTACTTTCTTGGTGCCGCG
TTGATA-AGATATTTCTACTTTCTAATGAAACTCTGGGTGTTGCTTTGTAGCACTAGTCACTCAAGGTTTTGACCATGAT
GTAAGTTGAAACAGATTATGATTTTTCATTTCACATTTTCTAACTATTGTTCATTCCATTGCAGTTACTGGCAGTTTCAG
CTAGACAATAATCATGAGTCTTGCTTGTCTCGTATGCCATGGCATGAACAGCCCCTCACACTCTCTTAGAAGCTACTCGG
TGTCGAGTTCAGAGGAGGACAACCGATGTGGAGCTGTTGTTTCCTGCTTAACTCGGAGAGTAACGCCGGCTGGATCTGCT
AGTGTTGGGACATCAAAGGTGACCCCCTTTCCATCCATAGCGGCTGGTCAAGGCACCGAGGGCACTCCTCGCCTTCAACG
AAGCCGTGCTGTGTCCAGGGACCTTGTCAGAGACTGGAACTTTGATGAAGCCGTAGTTGCAAACTAGATTAGGCGTCAGC
TGTTCCCAGTTGGATTCCGCACTCTTACTTATTCAGGAGGAGACTCCATCAATTTGGTGTACATTTTTTTGCTAGTATAC
TCTATGTCTATCAGTACTTTTCAGTTGAGA--C---TATCGGTCTATGCTCA------------CTTCTCATGAGCAGTT
TGTGGCTTGGTAACATATGAAGGCCAACCTGTGTAGATAGAATAAATTTTAGGGTATTTTTCCTATTTCTAAAAGTGGAT
ATGCTATCCTGTACTTCCTGTATATTATGAAATATCTAATTTCCTATAATTGCTGGGAAAATGGCCACTGGGATTTTCAT
GCGTTGCGGTTGGCATTTCTTTGCCACATGATAACACTGCAGTGGTCAATTGTATCAGCTATTTCTCTTGTGCACAAAAC
TTGCGTAAAAATTCATCAGCATGCTATATTTTCATTGATAAAATGCTGAAAAGCAAGGATGTTAAGTACTTCTC-CATAA
ATGATTTACAAGGTCTTTTCCACCCAAATCAGTGAACATCAATTATTTCCCATCTTAGGTTGTCGAAGCAACATATTATT
TTCATTTCTGACCTGCAGGTAAAGACAATTACATTACACCAAATGAAAAGTTTGAAACAAAGCAAATCGCTCGCAAGTTC
ACAACCAAGAAAATGGTGAACTATCTGTTGTACAACAATGGCATGTTTTCCTATTTTCCCAATGGGCATGCTTTTAATAT
AATGCTGGCGAAGATGCCTTCAGCACGCTATTTTTTATTGAACCGCGGCAGGGGCCTTGAGCAGAGCCATTGCGTCTTTT
ATCTTCTCCATCGCAGATTGTAGCGTTGACAGTGCAGCAGCGTAGGAGATACGAATGCCCTTGTCATCCCCAAATGCATC
TCCAGGGACAAGCGCGACCTGTGATGCAAGAGAAAACACCTTAGATACCCACCTACCCATTGATCTTGTTTATGTCGACT
GACGCACTCGAAATGGGTGTAACCGTCACCTGTGCTTTCTCTAGCAGGAACATGCAGAGGGTCTCAGAGTCCTTGATAGT
GCCAAAACCCTCTACCTCGGATCCGTAGTAGGAGCTGAAGTCGAGGAACAAATAGAAAGCACCCTGAAAATTGCGAAGCT
TAGCTACCTTCCTGATATAGATATGTCACATAGTCGC-------GTCGCAGTCGAGAGGCTTACCTGAGGTTCTGATATT
TTTACCCCTGGCAGTTCCCTGAAACTTCTTACAAGGTAATCCCGGCGCTCCTGGAATGCTTTGACCATGGTTGAAACTGC
TTCACCGCCGGCATAACCAAGGTTCAAGGCTGCAAGCCCTGCCTTCTGCGATATACTACTGGCACCAGATGTGTACTGTG
TAGTAAACAACTCACTATTATCAGGACAATTAAAAAAAAAATCAAGACTGGATATATGTGAGCC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------S------
------------SSSSSSSSS-SSSSSSSSS--------------------------------S-SSSS-SSSSSS----
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-------------------------------------------S----S------S---------S--------------
-----------------S------------------------S--S-------------S--------S-----------
--S-----------S---S-----SSSSSSSSSS-------S-----S----------------SS--------S-----
-----S-----------S-S----SSSS----------------------------------------------------
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------------------------------------------------------------S-S-----------------
--S---SSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S------S-S----
-----S-SSSSS-SSSSS---SS-S---SSSSS-----------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------S----S-----------------------------------------
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----------------------------------SSSSSSSSSSSSSSSSSSSSS---------------S---------
--S------------S----------S---S---------------S------------S--------------------
----------------------------------S--------S---------------------S------S-------
---------------------------------------------------S--------------------S-----S-
S---S----------------------S----------------------------------------------------
------------------S------------------------S--------------------------------S--S
-----------S------------------------------S-------------------------------------
S----------------------------------------------S-----S-------SS-----------------
------SS-SSS------------------------S---S----------------S----------------------
-----------------------------------------------------------------S--------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
----------SSSSSSSSSSSSS--------------------------------S--------------SS--------
----------------------------S---------------------------------------------------
-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------
---------------------------------------------------S----------------------------
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--S---------------------------------S---------------------------------------S---
----------------S-------S-------------------------------------------------------
------------------S-----------S-------------------------------------------------
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--------S-----------------------------------------------------------------------
--------S---------------------SS------------------------------------------------
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-------S------------------------------------------------------------------------
----------------S---------------SS----------------------------------------------
---------------------------------------------------------------S---S--------S---
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------S--------------------------S-----------
-----------------------------------------------S--------------------------------
---S------------S---------------------------------------------------S--------S--
------------------S--S----------------------S-----------------------------------
--------------------------------------S-----S---S-------------------------------
--------------------------S----------------------------------------------S------
------------------------------------------------S-----------------------------S-
-------S---S-----------------S---------S------------------------
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-CCACCGGCACCTGTTATGAT-----------------------------------------------------------
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>reverse_5434
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-------------------------------------------------------------------------GCTTCCC
GAGGTCCAACTTT-------------------------------------------------------------------
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>forward_4561
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-------------------------------------------------------------TCTGCCCGTAGAAAAGGAG
C-------------------------------------------------------------------------------
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>reverse_5437
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----------------------------------------------------------------------------TCCC
GAGGTCCAACTTTGAC----------------------------------------------------------------
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>forward_5433
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----------------------------------------------------TCCAAAATATTGTGCACCCGC-------
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>reverse_7297
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----------------CTGTAACCGTCACCTGTGCT--------------------------------------------
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----------------------------------------------------------------
