>input_sequence_33481
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--------ATGGCAAAGGCGGGAGAGAACAGCTTTGAGGATGAAATCATGGAGTCGGACATCGAATTGGAAGGGGAAGTT
GTTGAGCCGGACAATGATCCTCTGCAGAAGGTCAGGATTTGGGTGAAAAGTAGTTTGATTTTGATAGAGCCATCAATCAT
ATGTTCTGTGCTGATGGTGTGGAAAATTGATGTTGTTGCTTTGCCCTTATCTGTTACAGATGGGAGATCCATCGGTTGAA
GTCTCTGAAGAAATGCGCGACAAGGCACAGCTCTACAAAAAGAAGGGCGTTGATGCGCTTTCAGAAGGTAA-GGTTTAAT
TATT--CATAGGGATGTGAGCCAATTA--GTCTTTTAATACCTGCAATATAGGAGAGTGGAGGCGAGCTTTTGTAGTTCG
GTGAAACTTTGTACTGAAAGTGCTCCTCCTATTTGAATATTTGAATAAATGTGGATTTGTGTATTAGGTAAACTGGACGA
AGCAGTCGAGCACCTGACGGAGGCCATCTTGCTGAACCCCACTTCAGCTATCCTCTATGCAGCCAGGGGTATCAAGAGTT
ACTATATGTAATCCTTCAATTTGATCTTAACTTTATATGGCGCTCTTATCTTTGATGCACTTTATGCAGCTGGTGTTTTT
GTGAAGATGAAGAAACCAAATGCAGCAATTCTTGATGCGGAGGCAGCATTGCAGGTTTGGATGCCTCATGGATAATAAAT
CCCATTGCTGTCCATAGATATGCTCACAATCAAAGTTCCTGTGTAATGTGTACTTGCTCAGATAAATCCAGATTCTGCTA
AAGGATATAAATCACGAGGGATGGCGAAAGCTATGCTTGGGAAGTGGGAAGATGCTGCTCATGACCTTCACTTGGCAGCA
AAATTGGATTTTGATGAAGAGATCAGCTCAGAGCTTAAGAAGGTAATATAGTAACCACTAACATCCAAAATGCCTTTTGG
ACCCCGGGCTTAGTGATCCTGGATTCTCGAGAAATTCGAAAATAAATTTTGAGGTGTTAAAATTTGTTGAAGATAGCAAA
CTTTACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTTTCTAAATTTCCGGGATCAGCAGAGCCTTTTTTTA-TCTGAAGAAAACGCAAAAGCCTTGC
GTTTCAGTTCGTTGCCTGAGCTCCAAATCGCCGCACTCTTGTTAACATAGCCTACCATGGAAAAAT-GGAGAGTAGGGAG
GACACTGGTCCTGGCTGCTTGAAGTAAGGAGATGTCTCAAACATGCATT-CCATGTACAGGTTGAACCCAATGTACACAA
AATTGAGGAGCACAAGAAAAGGTATGAACGCCTGCGTAAAGAGAGGGACATGAAAAAAGCTGACTTGGAAAGACAGCGTA
GGCATGCTGAGGAGGTAATCATCTTTCCAAATGGTTGATAAAAGTAGGAAGTTCTCTACAAATCCTTTGTGTTTCCAAGT
GCTATCATTAAGACTGAAACTCGTTGA-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ATTAGTAGGAAGGTCTTTATAAATACTCAAACCATGTTTGGTTTTGTTGTGAC
TGTCTTGATACCTCAAGCAACTTCTGTAAGCTAATGTTTTCATATACATTGTGTTACACAGGTTTCTGCTGCTTCTGCTG
TTCTAAAGCCTGGTAAGTTTCGCATATAATTATTTGTTAGATTATCTCCATACAGAATTATA------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGCAAACGTC----GG
AAGTATACACAATATTTTTGGACCCCAATGGACAGCAAACGTTCGCTGTGGGGCATGGCAATTGTGAATGTTTTCTGTGG
CAAATTCTTGGGAAGCACATGGCAATTTGTTCACAAACACATGGCAACTTCTGGCAAACAGAGGATTTTGCTGCGAAATT
GCCGTGTTCGCTTGAAAGAACTGCCATGCTCCCAACACAGAAATTGCCGTGAAAAACGTTTGTTTTGCTATGCATCCCCG
GCGAACATCCGCTGAATAACATTACCCATATTTTTTGCTTGCTTTTGAAAACCATAATGTTCTGTGTTCTTATAACATTT
TCTCTGCAAAGTGAAGTGATTAATACTGCTACTGAAGCTGGATTTAATGTGTCTGACTCGCACATTATTTTGTGATGTTT
TATCAGGTGATGTGATCACTATCCACTCATCTAATCAACTGGAAGAAATATTTACAGCCGCGTCAAAACTGTCAAAGCTT
GTGATTCTGTATTTTACTGCAACATGGTGTGGACCATGTCGTTTTATGGGCCCTGTTTACAAAAGCTTATCTGAACAGCA
CCGGAATGTCATATTCCTTAAGCTGGACATTGATCAACGAAGCAATATTGCCCGTCGCTGGAATGTCTCGAGTGTTCCAA
CATTCTCCTGTGTGATAAACGGCAAAGAGATTGATAAGGTTGTCGGGGCTGACAAGACCGGCCTTGAGAGAAAAATTGCG
GAGCATGGCTCTCGTAAACAGTGA--------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr5D_1_TraesCS5D01G211100
ATGATTCTTGATAAACTGTTGCATTCGCTGGGGACAGCAAAGAGTCACTAGTAATACAATTCATAACATGAGCTCACAAA
TCAGATAATTATGCAGATGGATGATCATAGAGCATAACAATCTGCCACGTTGTCCATGGCATCCCCCTCATGCGTGG-AA
AATATTGCAGCCTATGGTATTTGGGCGATCATGCTAATTTTGCACATCATCTACACGTTTATGGCGAGAATCGATTTCAA
CATGA-TTTATGATGGAAGTATTTCACAAAATATAATATGGAAATGAAACTAGCTATTTATATATACCATAATAAATGGT
AA------------------------------------------------------------------------------
----------------------------------------------------TTCTCTAATTAAGACTT-----------
---CCCTACATAAGTACCCATGGCTGATCTGGCAGATAAAAATTAATGAGCACAAAAGATACATTTAATCTACATCTCCA
TGGGATCTCCCTCTTAATCCTGA-------GTTCATCACCATCACCAATCCATAGATCCCTATCACCCAGGATT-CGAAC
CATCACCTTTCTTTCAGGGGAAAAGCTCCTGCAATCAACTGGTAAGAGGTGGAAGATGGTCTGGACGATGCGGTGGTGGT
TCAGCTGCAGTTTCTTATTGCTCGTTGCCGCTCCAAACCTAGTCTC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------C----------------------------------------------------------GGATTCTTCAC
TTATCCTGTTGCCACCAAAGTGAGAGGAAACATCGAAGAAACCATTTTGTTTTGGACTTCGACAAAGCCTTTAGT-CCCC
CTGTCCCACTCTCCCTCTTGTTCCTTCTTTTCCGATGAATTTTATTGGTTCTGTTGTGCCTGACATGCTTCTTAGTCCTG
TTCGCAGCCTTGCAGT------------GAGGGTTCCGGTAATCTTTCTTGGTATCTTCATTGTGTACCGCTGACA----
----TTGATGATTTGGGCGTCATTGATGTGCAATATTATCTTTATTGGTTCTTAATGTTGGATGCAGTTAGTCCTATTAG
TTGGTTTTGTGCGAGTTATTCAAACA-TTTTTCTACAGATTAGTTGAATTTTAGTGAATTCTGGCTTTTG----------
CAGAAGGCATGGCAAAGGCGGGAGAGAACAGCTTTGAGGATGAAATCATGGAGTCGGACATCGAATTGGAAGGGGAAGTT
GTTGAGCCGGACAATGATCCTCTGCAGAAGGTCAGGATTTGGGTGAAAAGTAGTTTGATTTTGATAGAGCCATCAATCAT
ATGTTCTGTGCTGATGGTGTGGAAAATTGATGTTGTTGCTTTGCCCTTATCTGTTACAGATGGGAGATCCATCGGTTGAA
GTCTCTGAAGAAATGCGCGACAAGGCACAGCTCTACAAAAAGAAGGGCGTTGATGCGCTTTCAGAAGGTAA-GGTTTAAT
TATT--CATAGGGATGTGAGCCAATTA--GTCTTTTAATACCTGCAATATAGGAGAGTGGAGGCGAGCTTTTGTAGTTCG
GTGAAACTTTGTACTGAAAGTGCTCCTCCTATTTGAATATTTGAATAAATGTGGATTTGTGTATTAGGTAAACTGGACGA
AGCAGTCGAGCACCTGACGGAGGCCATCTTGCTGAACCCCACTTCAGCTATCCTCTATGCAGCCAGGGGTATCAAGAGTT
ACTATATGTAATCCTTCAATTTGATCTTAACTTTATATGGCGCTCTTATCTTTGATGCACTTTATGCAGCTGGTGTTTTT
GTGAAGATGAAGAAACCAAATGCAGCAATTCTTGATGCGGAGGCAGCATTGCAGGTTTGGATGCCTCATGGATAATAAAT
CCCATTGCTGTCCATAGATATGCTCACAATCAAAGTTCCTGTGTAATGTGTACTTGCTCAGATAAATCCAGATTCTGCTA
AAGGATATAAATCACGAGGGATGGCGAAAGCTATGCTTGGGAAGTGGGAAGATGCTGCTCATGACCTTCACTTGGCAGCA
AAATTGGATTTTGATGAAGAGATCAGCTCAGAGCTTAAGAAGGTAATATAGTAACCACTAACATCCAAAATGCCTTTTGG
ACCCCGGGCTTAGTGATCCTGGATTCTCGAGAAATTCGAAAATAAATTTTGAGGTGTTAAAATTTGTTGAAGATAGCAAA
CTTTACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTTTCTAAATTTCCGGGATCAGCAGAGCCTTTTTTTA-TCTGAAGAAAACGCAAAAGCCTTGC
GTTTCAGTTCGTTGCCTGAGCTCCAAATCGCCGCACTCTTGTTAACATAGCCTACCATGGAAAAAT-GGAGAGTAGGGAG
GACACTGGTCCTGGCTGCTTGAAGTAAGGAGATGTCTCAAACATGCATT-CCATGTACAGGTTGAACCCAATGTACACAA
AATTGAGGAGCACAAGAAAAGGTATGAACGCCTGCGTAAAGAGAGGGACATGAAAAAAGCTGACTTGGAAAGACAGCGTA
GGCATGCTGAGGAGGTAATCATCTTTCCAAATGGTTGATAAAAGTAGGAAGTTCTCTACAAATCCTTTGTGTTTCCAAGT
GCTATCATTAAGACTGAAACTCGTTGA-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ATTAGTAGGAAGGTCTTTATAAATACTCAAACCATGTTTGGTTTTGTTGTGAC
TGTCTTGATACCTCAAGCAACTTCTGTAAGCTAATGTTTTCATATACATTGTGTTACACAGGTTTCTGCTGCTTCTGCTG
TTCTAAAGCCTGGTAAGTTTCGCATATAATTATTTGTTAGATTATCTCCATACAGAATTATA------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGCAAACGTC----GG
AAGTATACACAATATTTTTGGACCCCAATGGACAGCAAACGTTCGCTGTGGGGCATGGCAATTGTGAATGTTTTCTGTGG
CAAATTCTTGGGAAGCACATGGCAATTTGTTCACAAACACATGGCAACTTCTGGCAAACAGAGGATTTTGCTGCGAAATT
GCCGTGTTCGCTTGAAAGAACTGCCATGCTCCCAACACAGAAATTGCCGTGAAAAACGTTTGTTTTGCTATGCATCCCCG
GCGAACATCCGCTGAATAACATTACCCATATTTTTTGCTTGCTTTTGAAAACCATAATGTTCTGTGTTCTTATAACATTT
TCTCTGCAAAGTGAAGTGATTAATACTGCTACTGAAGCTGGATTTAATGTGTCTGACTCGCACATTATTTTGTGATGTTT
TATCAGGTGATGTGATCACTATCCACTCATCTAATCAACTGGAAGAAATATTTACAGCCGCGTCAAAACTGTCAAAGCTT
GTGATTCTGTATTTTACTGCAACATGGTGTGGACCATGTCGTTTTATGGGCCCTGTTTACAAAAGCTTATCTGAACAGCA
CCGGAATGTCATATTCCTTAAGCTGGACATTGATCAACGAAGCAATATTGCCCGTCGCTGGAATGTCTCGAGTGTTCCAA
CATTCTCCTGTGTGATAAACGGCAAAGAGATTGATAAGGTTGTCGGGGCTGACAAGACCGGCCTTGAGAGAAAAATTGCG
GAGCATGGCTCTCGTAAACAGTGAGCT--ATCATGTTACTCCTATGTTGTACTCATATGGACTCAACTCTCAATAAATGA
GCGGTTATGAATAAAAATTGACCTACATGTGTGGAAATTCTGGTTGTCTCTGTATTTTCATAT-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGTATTAATTTATGTGCTTT
AGTAGTGGTC--GTGGTGCATGCACATACACCCGAGAGAGTATGTATTTTGATGTTCCATGGAAAGTTACTCTAGGAATC
TACATGTTGAAAGTTTACCTACAAAACTAAAGTTGCTCTTGCAG-ATTCTTTTAGCTTTTGTGTCTAAAATGAAATATAT
TTCTTGTTACTAGT---GTGAGTCTGTACCTTGTTCTACTTATGTTGTTATGTGTTTTTAATT--CAAAACCTAATTACT
TCAACATTCCTCATTTGATCTCTGAAAAGTATTTCTCATATTGTAGACTACTTGTGTGAATCTGATTTGCTGTTGATGCC
ATCATAGTTTGCTTGTCCGTGTCCATTGATAATTGATGCAGTAGCTTTTGTAAACATAACGGAGAAATAAATACAACATT
TGATAACAATATTCCGCACCTTTGTTTTGTAAGTTATTCATGGTAAAATGTGTG-CAATTACATATTCTATGGTTCT-AT
ATGTAAGAG-----CACAGTATGACGTCCTGAATGACTGCATGGTGACCTACAATGAAATACTGCACGGTGCAGCCTCTG
GGGCACATCTACCTGAATTAGTCAAAATAAGAAAGAATGATGTTGGATTTCACTTGATGCTTTTGAAGGCAAACTTTCCA
TTACATAGATTAAAGCTGGTAGCAATGTGCTGAAAGGAGATAACAAATGCATTCTGTCAAAAGAGAATGAGAAAGACAAC
AAATGCACACAAAGAGA---TATGGGATACATATTTGGTATGCCTTTGCTGGAAAGCTATTTACTTCCTCTCATTCTTGG
AGTAGAATCTCAGGACCACATAGAAGAAGAGCCGATAGAGCACACCCCAGGCAAGGAGGATTGCAACATCAACCCAGATG
C
>chr5B_1
ATGATTCTCGATAAAATGCTGCATTCGTATGGGACAACATAGAGTCACTAGTACTACAATTCATAACACGAGCTCACAAA
TCAGATCATAATGCAGATGGAT------AGAGCATAACAATCTGCCACGTTGTCCATGGCATCCCCCTCATGCGTTGAAA
AATATCGCAGCCTATGGTATTTGGGCGATCCTGCTAATTTTGCACATCATCTACACATTTATTGTGAGAATCGATTTCAA
CATGG-TTTATGATGGAAGTAATTCACAAAATATAATAT-GAAATGAAACTAGCTATTTATACCAC----AATAAATGGT
AA------------------------------------------------------------------------------
----------------------------------------------------TTCTCTGAATAAGACTT-----------
---CCCTACATAAATACCCATGGCCGATCTGGCAGATAAAAATTAATGAGCACAAAAGATACATCTAATCTACATCTCCA
TGGGATCTCCCTCTTAATCCTGACTCCTGAGTTCACCACCATCACCAATCCATAGATCCCTGTCACCCAGGGTTCCGAAC
CATCACCTTTCTTTCAGGGGAAAAGTTCCTGCAATCAACTGGTAAGAGGTGGAAGATGGTCTGAATGATGCGGTGGTGGT
TCAGCTGCAGTTTCTTATCGCTTGTTGCCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGACACCTTATCAGGTGAT
CTCGTTCAATC----------------------------------------------------------GGATTCTTCAC
TTATCCTGTTGCCATCAAAGTGAGAGGAAGCATCGAAGAAACCATTTTGTTTTGGACTTCGACAAAGCCTTTAGT-CCCC
CCGTCCCACTCTCCCTCTTGTTCCTTCTTTTCCGATGAATTTTATTGGTCCTGTTCA-----------------------
----CAGCCTTGCAGTGAGGGGTGAGGGTAGGGTTCCGGTAATCTTTCTAGGTATCTTCATTGTGTACCGCTGACACCCT
ATTGTTGATGATTTGGGCGTCATTGATGTGCAAGATTATCTTTATTGGTTCTTAATGTTGGATTCAGTTAGTCCTATTAG
TTGGTTTTGTGCGAGTTATTCAAATTTTTTTTTTACAGATTAGTTGAATTTTAGTGAATTCTGGTTTTTG----------
CAGAAGGCATGGCAAAGGCGGGAGAGAACAGCTTTGAGGATGAAATCATGGAGTCGGACATCGAATTGGAAGGGGAAGTT
GTTGAGCCGGACAATGATCCTCTGCAGAAGGTCAGAATTTGGGTGAAAAGTCGTCTGATTTTGATAGAGCCTTCAATCAT
ATGTTCCGTGCTGATGGTGTGGAAAATTGATGTTGTTGCTTTGCCCTTATCTGTTACAGATGGGAGATCCATCAGTTGAA
GTCTCTGAAGAAATGCGCGACAAGGCACAGCTCTACAAAAAGAAGGGTGTTGATGCGCTTTCAGAAGGTAAAGGTTTAAT
TATTGTCATAGCGATGTGAGCCAATTATAGTCTTTTAATACCTGCAATATAGGAGAATGGAGGTGAGCTGTTGTAGTTCG
GTGAACCTTGGTACTGAAAGTGCTCCTACTATTTGAATATTTAAATAAATGTGGATTTGTGTATTAGGTAAACTGGACGA
AGCAGTCGAGCACCTGACGGAGGCCATCTTGCTGAACCCCACTTCAGCTATCCTCTATGCAGCCAGGGGTATCAAGAATT
ACTATATGTAATCCTTCAATTTGATCTTAACTTTATATGGCGCTCTTATCTTTGATGCACTTTATGCAGCTGGTGTTTTT
GTGAAGATGAAGAAACCAAATGCAGCAATTCTTGATGCGGAGGCAGCATTACAGGTTTGGATCCCTCATGGATAATAAAT
CCCATTGCTTTCCATAGATATGCTCACAATC-AAGTTCCTGTGTAATGTGTACTTGCTCAGATAAATCCAGATTCTGCTA
AAGGATATAAATCACGAGGGATGGCGAAAGCTATGCTTGGGAAGTGGGAAGATGCTGCTCATGACCTTCACTTGGCAGCA
AAATTGGATTTTGATGAAGAGATCAGCTCAGAGCTTAAGAAGGTAATATAGTAACCACTAACATCCAAAATGCCTTTTGG
ACCCCGGGTTTAGTGATCCTGGATTCTTGAGAAATTCGAACATAAATTTTGAGGTGTTAAAATTTGTTGAAGATAGCAGA
CATTACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTTTTAAAATTTCCGGGATCAGCAGAGCCTTTTTTTTCTCTCAAGAAAACGCAAAAGCCTTGC
GTTTCAATTCATTGCCTGAGCTCCAAATCGCCTCACTCTTGTTAACATAGCCTACCATGGAAAAAT-GGAGATTAGGGAG
GACACTGGTCCTGGCCGCTTGAAGTAAGGATATGTCTCAAACATGCATT-CCATGTACAGGTTGAACCCAATGTACACAA
AATTGAGGAGCACAAGAAAAAGTATGAACGCCTGCGTAAAGAGAGGGACATGAAAAAAGCTGACTTGGAAAGACAACGTA
GGCATGCTGAGGAGGTAATCATCTTTCCAAATGGTTGATATAAGTAGGAAGTTCTCTACAAATTCTTTGTGTTTCCAAGT
GTTATCATTAAGACTGAAACTCGTTTA-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ATTAGTAGGAAGGTCTTTACAAATACTCAAACCATGTTTGGTTTTGTTGTGAC
TGTCTTGATACCTCAAGCAACTTCTGTATGCTAATGTTTTCATATACATTGTGTTACACAGGTTTCTGCTGCTTCTGCTG
TTCTAAAGCCTGGTAAGTTTCGTATATAATTATTTGTTAGATTATCTCCATACAGACTTATA------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TACAAGCGTTCGAAGG
AAGTATACACAATATTTTTGGATCCCAATAGACAGCAAACGTTCGCTGTGGGGCATGGCAATTGTGAACGTTTTCTGTGG
CAAATTCTTCAGAAGCACATGGCAATTTGTTCACAAACACATGGCAACTTCTGGCAGAC--AGGATTTTGCTGCGAAATT
GCTGTGTTCGCTTGAAAGAACTGCCATGCTCCCAACACAGAAATTGCCGTGAAAAACATTCGTTTTGCCATGCATCCCCA
GCGAACGTTCGCTGAATAACATTACCCATATTTTTTGCTTGCTTTTGCAGACCATAATGTTCTGTGTTCTTATAACATTT
TCTCTGCAAAGTGAAGTGATTATTATTGCTACTGAAGCTGGATTTAATGTGTCTGACTCGCACATTATTTTGTGATGTTT
TATCAGGTGATGTGATCACTATCCACTCATCTAATCAACTGGAAGAAATATTTACAGCCGCGTCAAAACTGTCAAAGCTT
GTGATTCTGTATTTTACTGCAACATGGTGTGGACCATGTCGTTTTATGGGCCCTGTTTACAAAAGCTTATCTGAACAGCA
CCGGAATGTCGTATTCCTTAAGCTGGACATTGATCAACAAGGCAATATTGCCCATCGCTGGAATGTCTCAAGTGTTCCAA
CATTCTCCTGTGTGATAAACGGCAAAGAGATTGATAAGGTTGTCGGGGCTGACAAGACCGGCCTTGAGAGAAAAATTGCG
CAGCATGGCTCTCTTAAACACTGAGCT--ATCATGTTACTCCTATGTTGTACTCCTATGGACTCAACTCT---TAAATGA
GCGCTTATGAATAAAACATGACCTACATGTGTGGACATTCTGGTTGTCTCTGTATTTTCATATGCTCCCTCCGCTTCTAA
ATATAAGACCTTTTAGAGATTTCAACACGGACTACATACGGATGTATATAGACATAGTTTTGAGTGTATATTCACTCATT
TTGCTCCGTATGTAGACCGTATTGGAATCTCTAAAAGGACTTATATTTAGGAACGGAGGGAGTATTAATTTATGTGCTTT
AGTAGTGGTCC--TGGTGCATGCACATACACCCGAGAGAGTATGTATTTTGATGT----TGGAAAACTACTCTAGGAATC
TACATGTTGAAAGTTTACCTACAAAACTAAAGTTGCTCTTGCAGGATTTTTCTAGCTTTTCTGTCTAAAATGAACTATAT
TTCTTGTTACTAGT---GTGAGTCTGTACCTTGTTCTACCTATGTTGTTATGTGTTTTTAATT--CAAAAAATCTAATAA
C-----TTGCTCATTCAATCTCTAAAAAATATTTCTCATATTGTAGACTACTTGTGCGAATCTGATTTCCTGTTGATGCC
ATCATAGTTTGCTTGTCCGTGTCCATTGGTAATTGATGCAGTAGCTTTTGTAAACATAGCGGAGAAATAAAT---ACATT
TGGTAACAATATTCCACACCTTTGTTTTGCAAGTTATTCATTGTAAAATGTGTGACAATTACATATTCTATGGTTCTTAT
ATGTAAGAGCACA-----GTATGACTTCCTGCATGACTGCATGGCGACCTACAACGAAATGCTGCACGGTCCAGCCTCTG
GGGCACATCTACCTGAATTGGTCAAAATAAGAAAGAATGATGTTGGCTTTCACTTGATGCTTTTGAAGGCAAACTTTCCA
TTACATAGATTAAAGCTGGTAGCAATGTGCTGAAAGGAGATAACAAATGCATTCTGTCAATAGAGAATGAGAAAGATAAC
AAATGCACACAAAGAGATACTATGGGATACATATTTGGTATGCCTTTGCTGCAAAGCTATTTACTTCCTCTCATTCTTGG
AGTAGAATCTCAGGACCACATAGAAGAAGAGCCGATAGAGCACACCCCAGGCAAGGAGGATTGCAACATCAACCCAGATG
C
>chr5A_115
--------------------------------------------------------------------------------
----------------------------------TAACAATCTCCCACGTTGTCAACGTCACCCCTCTTATGCGTGG-AA
AATATCGCAGCCTATGGTATTTGGGCGATCATGCAAATTTTGCACATCATCTACACATGTATTGCGAGAATCGATTTCGA
CATGGTTTTATGATGGAAGTATTTCACAAAATATTACTCCCTCCGTTTCTAAATATTAGTCTTTTTAGAGATTCCACTAT
GTACTACATGCGGAGCAAAATGAGTGAATCTACACTCTAAAATATGTCCATATACATCCGTATGTAGTTTTTAGTGGAAT
CTCTAAACAGACTTATATTTAGGAACGGAGGGAGTATATGGAAGTATACAGTTTCTCTGAATAAGACTTATGCACAAGAC
AATCCCTACATAAATACCCATGGCCGATCTGGCAGATAAAAAT-AATGAGCACAAAAGATACATCTAATCTACATCTCCA
TGGGAC--------------------------------------------------------------------------
------------------------------------------------------GATGGTCTGGACGATGCGGTGGTGGC
CCAGCTGCAGTTTCTCATCGCTCGTTGCCTCTCCAAACCTAGTCTC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTCCACCATCCCTCCCTCTTCTTCTTTGTGGAAACCTCATCAAGTGATCTCGCTCGCTCGGATTCTTTGC
TTATCCCGTTGCCACCAAAGTGAGAGGAAGTATCGAAGAAACCATTTTGTTATGGACTTCGACAAAGCCTTTAGTACCCC
CGGTCCCCCTCTCCCT--------TTTTTTTCCGATGAAGTTTATTGGTTCTGTTGTGCTTGACATGCTTCTTGGTCCTG
TTCTCAGCCTTGGAGC------------TAGGTTTCCGGTAATCTTTCTTGGTATCTTCATTGTGTACCGCTGACACCAT
ATTGTTGATGATTTGGGCGTCATTGATGTGCAAGATTATCTTTATTGGTTCTTTATGTTGGATGCAGTTAGTCCTAGTAG
TTGGTTTTGTGCAAGTTATTCAAACAAAAACTTTACAGATTAGTTGAACTTTAGTGAATTTTGTTTTTTGCAGAAGGCAT
CAGAAGGCATGGCGAAGGTGGGAGAGAACAGCTTCGAGGATGAAATCATGGAGTCGGACATTGAATTGGAAGGGGAAGTT
GTTGAGCCAGACAATGATCCTCTGCAGAAGGTCAGGATTTGGGTGAAAAGTCGTTTGTTTTTGATAGAACCATCAACCAT
ATGTTCTGTGCTGGTGGTGTGGAAAATTGATGTTG-TGCTTTTCCCTTATCTGTTACAGATGGGAGATCCATCGGTTGAA
GTCTCTGAAGAAATGCGCGACAAGGCACAGCTCTACAAAAAGAAGGGTGTTGATGCGCTTTCAGAAGGTAA-GGTTTAAT
TATTGTCACAGGGATGTGAGGCAATTA--ATCTTTGCATA--TGCAATATAAGAGAATGGATGTGAGCTTTTGTAGTTTG
GTGAAACTAGATACTGAAAGTTCTCCTCCTATTTGAATATTTGAATAAATGTGGATTTGTGTATTAGGTAAACTGGACGA
AGCAGTCGAGCACCTGACGGAGGCCATCTTGCTGAACCCCACTTCAGCTATCCTCTATGCAGCCAGGGGTATCAAGAGTT
ACTATATGTAATCCTTCAATTTGATCTTGACTTTGTATGGCGCTCTTATCTTTGATGCACTTTATGCAGCTGGTGTTTTT
GTGAAGATGAAGAAACCAAATGCAGCGATTCTTGATGCGGAGGCAGCATTACAGGTTTGGATGCCTCATGGATAATAAAT
CCCATTGCTGTCCGTAGATATGCTCACAATC-AAGTTCCTGTGTAATGTGTACTTGCTCAGATAAATCCAGATTCTGCTA
AAGGATATAAATCACGAGGGATGGCAAAAGCTATGCTTGGGAAGTGGGAAGATGCTGCTCATGACCTACACTTGGCAGCA
AAATTGGATTTTGATGAAGAGATCAGCTCAGAGCTTAAGAAGGTAAGATATTAACCATTAACATCCAAAATGCCCTTTGG
ACCCCGGGCTTAGTGATCCTGGACTTTCGAGAAATTCGAAAATAAATATTGAGGTGTTAAAATTTGTTGAAGATAGCAAA
CATCACATACTCTGTTTCTTTTACAAATCCACATTTTTTTATGTAGCTCACAAAAGTAGTTATTAATGGAATTTTACACT
GCATATTACATCTCTCTCTCTCTCTCTCTATATATATATATACATACATGTGGAATTATTTTAGGATTTTTTCAGAACTT
TTGATATGATTTTTGATTTTTTTTAATTTCTGGGATCATG-GAGCCTTTTTTTTCTCTCGAGAAAACGCAAAGGCCTCAC
GTTTCAATGCATTCCCTGAGCTCCAAATCGCCGCACTCCTGTTAACATAGCCTACCATGGAAAAAAAGGAGAGTAGGGAG
GACACTGATCATTTCCGCTTGAAGTAAAGCTGTGTCTCAGACATGCATTCCCATGTACAGGTTGAACCCAATGTACACAA
AATTGAGGAGCACAAGAAAAAGTATGAACGCCTGCGTAAAGAGAGGGACATGAAAAAAGCTGACTTGGAAAGACAGCGTA
GGCATGCTGAGGAGGTAATCATCTTTCCGAATGGTTGATAGAAGTAGGAAGGTCTCTACAAATCCTTTGTGTTTCCGAGT
GTTATCATTAAGACTGAAACTCGTTTACTCCCTCTGTTCCTAAATATAAGTCTTTTTAGACATTCCAATATGGACCACAT
ACGGAGCATAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCCGTATATAGTCCATATTGAAATCTCTAAATA
GGCTTATATTTAGAAACGGAGGGAGTAATTAGTAGGAAGGTCTTTACAAATACTCAAACCATGTTTGGTATTGTTGTGAC
TGTCTTGATACCTCAAGCAACTTCTGTATACTAATGTTTTCATATACATTGTGTTACACAGGTGTCTGCTGCTGCTGCTA
TTCTAAAGCCTGGTAAGTTTCGTATATA---ATTTGTTAGATTATCTCCATACAGACTTATACTCCCTCCGTTCCTAAGT
ATAAGTCTTTTTATAGATTCAAATACGGACTACATACGAAGCAAAATGAGTGAATCTACACTCTAAAATATGTCTATATA
CATCCGTACGTAGTTCTTATTGAAATCTCTAAAAAGACTTATATTTAAGAACGGAGGGAGTATATACAAACATTCGAAGG
AAGTATACACAATATTTTTTGCTTGCT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TTCTGTGTTCTGATAACATTT
CCTCTTCAAAGTGAAGTGAT--ATATTGTTGCTGATGCTGGATTTAATATGTCTGACGCACATATTATTTTGTGATGTTC
TATCAGGTGATGTGATCACTATCCACTCATCTAATCAACTGGAAGAAATATTTACAGCCGCGTCAAAACTGTCGAAGCTT
GTGATTCTGTATTTTACTGCAACATGGTGTGGACCATGTCGTTTTATGGGCCCTGTTTACAAAAGCTTATCTGAACAGCA
CCGAAATGTCGTATTCCTTAAGCTGGACATTGATCAACAAGGCAATATTGCCCATCGCTGGAATGTCTCAAGTGTTCCAA
CATTCTCCTGTGTGATAAATGGCAAAGAGATTGATAAGGTTGTCGGGGCTGACAAGACCGGCCTTGAGAGAAAAATTGCG
GAGCATGGCTCTCGTAAACAGTGAGCTGTATCATGTTACTCCCATGTTGTACTCATATGGACTCAACTC--AATAAATGA
GTGGTTATGAATAAAAATTGACCTACATGTGTGGAAATTCTGTCTGTCTCTGTATTTTCATAT-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGTATTAATTTATGTGCTTT
AGTAGTGGTCGTGTGGTGCATGCACATACACCCAAGAGAGTATGTATTTTGATGTTCCATGGAAAGTTACTCTAGCAATC
TACATGTTGAAAGTTTACCTACAAAACTAAAGTTGCTTTTGCAGGATTCTTTTAGC-TTTCTGTCTAAAATGAACTATAT
TTCTTGTTAGTAGTACTGTGAGTCTGTACCTTGTTCTACCTATGTTGTTATGTGTTTTTAATTCACAAAATCTAATAGCT
TCAACATTCCTCATTCGATCTCTGAAAAGTATTTCTCATATTGTAGACTACTTGTGTGAATCTGATTTGCTGTTGATGCC
ATCATAGTTTGCTTGTCCGTGTCCATTGATAATTGATGCAGTAGCTTTTGTAAACCTAACGGAGAAATAAATACAACATT
TGATAACAATATTCCACACCTTTGTTTTGTAAGTTATTCATTGTAAAATGTGTGCCAATTACATATTCTATGGTTCTTAT
ATGTAAGAGCACATCACAGTATGACTTCCTGCATGATTGCATGGCGACCTACAACAAAATGCTGCACGGTGCAGCCTCTG
GGGCACATCTACCTGAACTAGTCAAAATAAGAAAGAATGATGTTGGCTTTCGCTTGATGCTTTTGAAGGCAAACTTTCCA
TTACATAGATTAAAGCTGGTAGCAATGTGCTGAAAGGAGATAACAAATGCATTCTGCCAAAAGAGAATGAGAAAGATCAC
AAATGCACACAAAGAGA---TATGGGATACATATTTGGTATGCCTTTGCTGGAGAGCTATTTACTTCCTCTCATTCTTGG
AGTAGAATCTGAGGACCACATAGAAGAAGAGCCGATAGAGCACACCCCAGGCAAGGAGGATTGCAACATCAACCCAGATG
C
>SNPs
--------S------S--S--------SSS------S--S-------------S--------------S-----------
------S--S------------SSSSSS----------------------------------------------------
-----S--------------------------------------------------S-----S-----------------
----S----------------------------------S-----------------------S-SSS-S----------
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>forward_1202
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-------------------------------------------------------------GACAAAGCCTTTAGTCCCC
CT------------------------------------------------------------------------------
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>reverse_2811
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----------GTTGCCTGAGCTCCAAATCG--------------------------------------------------
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>forward_2807
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-------------------------------------------------------------------GCAAAAGCCTTGC
GTTTCAG-------------------------------------------------------------------------
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>reverse_4294
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-----------------------------------------------------GTCGCTGGAATGTCTCGAGT-------
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>forward_4251
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-----------------------------------------------------------------------TGAACAGCA
CCGGAATGTCA---------------------------------------------------------------------
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>reverse_5226
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-------------------------GTCCTGAATGACTGCATGGTG----------------------------------
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